@atomic-ehr/fhir-canonical-manager 0.0.6 → 0.0.8

package/README.md

@@ -29,10 +29,10 @@ npm install @atomic-ehr/fhir-canonical-manager
 import { CanonicalManager } from '@atomic-ehr/fhir-canonical-manager';
 
 // Create and initialize the manager
-const manager = CanonicalManager({ 
-    packages: ["hl7.fhir.r4.core"], 
+const manager = CanonicalManager({
+    packages: ["hl7.fhir.r4.core"],
     workingDir: "tmp/fhir",
-    registry: "https://fs.get-ig.org/pkgs" // optional, default registry
+    registry: "https://fs.get-ig.org/pkgs/" // optional, default registry
 });
 
 await manager.init();
@@ -94,7 +94,7 @@ Configuration is stored in `package.json`:
 {
   "fcm": {
     "packages": ["hl7.fhir.r4.core", "hl7.fhir.us.core@5.0.1"],
-    "registry": "https://fs.get-ig.org/pkgs"
+    "registry": "https://fs.get-ig.org/pkgs/"
   }
 }
 ```
@@ -257,13 +257,13 @@ interface Config {
 
 Example:
 ```typescript
-const manager = CanonicalManager({ 
+const manager = CanonicalManager({
     packages: [
         "hl7.fhir.r4.core",
         "hl7.fhir.us.core@5.0.1"
-    ], 
+    ],
     workingDir: "./fhir-packages",
-    registry: "https://fs.get-ig.org/pkgs"
+    registry: "https://fs.get-ig.org/pkgs/"
 });
 ```
 
@@ -339,17 +339,17 @@ Searches and returns full resources matching criteria.
 
 ```typescript
 // Get all StructureDefinitions
-const structures = await manager.search({ 
-    type: 'StructureDefinition' 
+const structures = await manager.search({
+    type: 'StructureDefinition'
 });
 
 // Get all resources of kind "resource"
-const resources = await manager.search({ 
-    kind: 'resource' 
+const resources = await manager.search({
+    kind: 'resource'
 });
 
 // Complex search
-const valuesets = await manager.search({ 
+const valuesets = await manager.search({
     type: 'ValueSet',
     package: { name: 'hl7.fhir.r4.core', version: '4.0.1' }
 });
@@ -361,13 +361,13 @@ Searches and returns index entries (metadata only).
 
 ```typescript
 // Find all CodeSystems
-const entries = await manager.searchEntries({ 
-    type: 'CodeSystem' 
+const entries = await manager.searchEntries({
+    type: 'CodeSystem'
 });
 
 // Find by URL
-const entries = await manager.searchEntries({ 
-    url: 'http://hl7.org/fhir/StructureDefinition/Patient' 
+const entries = await manager.searchEntries({
+    url: 'http://hl7.org/fhir/StructureDefinition/Patient'
 });
 ```
 
@@ -534,12 +534,12 @@ The cache is stored as a JSON file with the following structure:
 ### Working with Multiple Packages
 
 ```typescript
-const manager = CanonicalManager({ 
+const manager = CanonicalManager({
     packages: [
         "hl7.fhir.r4.core",
         "hl7.fhir.us.core@5.0.1",
         "hl7.fhir.us.davinci-drug-formulary"
-    ], 
+    ],
     workingDir: "./fhir-packages"
 });
 
@@ -549,7 +549,7 @@ await manager.init();
 const allValueSets = await manager.search({ type: 'ValueSet' });
 
 // Search in specific package
-const usCoreProfiles = await manager.search({ 
+const usCoreProfiles = await manager.search({
     type: 'StructureDefinition',
     package: { name: 'hl7.fhir.us.core', version: '5.0.1' }
 });
@@ -559,14 +559,14 @@ const usCoreProfiles = await manager.search({
 
 ```typescript
 // Use the default FHIR package registry
-const manager = CanonicalManager({ 
+const manager = CanonicalManager({
     packages: ["hl7.fhir.r4.core"],
     workingDir: "./fhir-packages",
-    registry: "https://fs.get-ig.org/pkgs"
+    registry: "https://fs.get-ig.org/pkgs/"
 });
 
 // Use a custom NPM registry
-const manager = CanonicalManager({ 
+const manager = CanonicalManager({
     packages: ["hl7.fhir.r4.core"],
     workingDir: "./fhir-packages",
     registry: "https://my-private-registry.com"
@@ -582,10 +582,10 @@ async function validateResource(resource: any, manager: CanonicalManager) {
     if (!profileUrl) {
         throw new Error('No profile specified');
     }
-    
+
     // Resolve the StructureDefinition
     const profile = await manager.resolve(profileUrl);
-    
+
     // Validate resource against profile
     // ... validation logic ...
 }
@@ -597,12 +597,12 @@ async function validateResource(resource: any, manager: CanonicalManager) {
 async function analyzeValueSetDependencies(manager: CanonicalManager) {
     // Get all ValueSets
     const valueSets = await manager.search({ type: 'ValueSet' });
-    
+
     const dependencies = new Map<string, Set<string>>();
-    
+
     for (const vs of valueSets) {
         const vsPackage = vs.package?.name || 'unknown';
-        
+
         // Check compose.include for external code systems
         if (vs.compose?.include) {
             for (const include of vs.compose.include) {
@@ -610,7 +610,7 @@ async function analyzeValueSetDependencies(manager: CanonicalManager) {
                     try {
                         const cs = await manager.resolve(include.system);
                         const csPackage = cs.package?.name || 'unknown';
-                        
+
                         if (csPackage !== vsPackage) {
                             if (!dependencies.has(vsPackage)) {
                                 dependencies.set(vsPackage, new Set());
@@ -624,7 +624,7 @@ async function analyzeValueSetDependencies(manager: CanonicalManager) {
             }
         }
     }
-    
+
     return dependencies;
 }
 ```
@@ -766,4 +766,4 @@ Contributions are welcome! Please feel free to submit a Pull Request.
 2. Functional programming style
 3. No external dependencies except Node.js built-ins
 4. Comprehensive tests in `test/index.test.ts`
-5. Update README.md with API changes
+5. Update README.md with API changes

package/dist/cli/index.d.ts

@@ -1,5 +1,5 @@
-#!/usr/bin/env bun
-import type { Config } from '../index.js';
+#!/usr/bin/env node
+import type { Config } from "../index.js";
 export declare function parseArgs(args: string[]): {
     positional: string[];
     options: Record<string, string | boolean>;

package/dist/cli/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":";AAMA,OAAO,KAAK,EAAE,MAAM,EAA2B,MAAM,aAAa,CAAC;AAgGnE,wBAAgB,SAAS,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG;IACzC,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,CAAC;CAC3C,CA4CA;AAED,wBAAsB,eAAe,IAAI,OAAO,CAAC,GAAG,CAAC,CAWpD;AAED,wBAAsB,eAAe,CAAC,IAAI,EAAE,GAAG,GAAG,OAAO,CAAC,IAAI,CAAC,CAG9D;AAED,wBAAgB,wBAAwB,CAAC,WAAW,EAAE,GAAG,GAAG,OAAO,CAAC,MAAM,CAAC,CAO1E"}

package/dist/cli/index.js

@@ -1,22 +1,22 @@
-#!/usr/bin/env bun
-import * as fs from 'fs';
-import * as path from 'path';
-import { fileURLToPath } from 'url';
-import { CanonicalManager } from '../index.js';
-import { initCommand } from './init.js';
-import { listCommand } from './list.js';
-import { searchCommand } from './search.js';
-import { resolveCommand } from './resolve.js';
+#!/usr/bin/env node
+import * as fs from "fs";
+import * as path from "path";
+import { fileURLToPath } from "url";
+import { CanonicalManager } from "../index.js";
+import { initCommand } from "./init.js";
+import { listCommand } from "./list.js";
+import { searchCommand } from "./search.js";
+import { resolveCommand } from "./resolve.js";
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
-const packageJsonPath = path.join(__dirname, '..', '..', 'package.json');
-let VERSION = 'unknown';
+const packageJsonPath = path.join(__dirname, "..", "..", "package.json");
+let VERSION = "unknown";
 try {
-    const packageJson = JSON.parse(fs.readFileSync(packageJsonPath, 'utf-8'));
+    const packageJson = JSON.parse(fs.readFileSync(packageJsonPath, "utf-8"));
     VERSION = packageJson.version;
 }
 catch (error) {
-    VERSION = '0.0.3';
+    VERSION = "0.0.3";
 }
 function showHelp() {
     console.log(`
@@ -26,7 +26,7 @@ Usage: fcm <command> [options]
 
 Commands:
   init       Initialize FHIR packages in current directory
-  list       List packages or resources  
+  list       List packages or resources
   search     Search for resources
   resolve    Get a resource by canonical URL
 
@@ -44,23 +44,32 @@ Examples:
 async function main() {
     const args = process.argv.slice(2);
     const command = args[0];
-    if (!command || command === '--help' || command === '-h') {
+    if (!command || command === "--help" || command === "-h") {
         showHelp();
+        if (process.env.NODE_ENV === 'test') {
+            return;
+        }
         process.exit(0);
     }
-    if (command === '--version' || command === '-v') {
+    if (command === "--version" || command === "-v") {
         console.log(VERSION);
+        if (process.env.NODE_ENV === 'test') {
+            return;
+        }
         process.exit(0);
     }
     const commands = {
         init: initCommand,
         list: listCommand,
         search: searchCommand,
-        resolve: resolveCommand
+        resolve: resolveCommand,
     };
     if (!commands[command]) {
         console.error(`Error: Unknown command '${command}'`);
         console.error(`Run 'fcm --help' for usage information`);
+        if (process.env.NODE_ENV === 'test') {
+            throw new Error(`Unknown command '${command}'`);
+        }
         process.exit(1);
     }
     try {
@@ -68,6 +77,9 @@ async function main() {
     }
     catch (error) {
         console.error(`Error: ${error instanceof Error ? error.message : String(error)}`);
+        if (process.env.NODE_ENV === 'test') {
+            throw error;
+        }
         process.exit(1);
     }
 }
@@ -76,10 +88,10 @@ export function parseArgs(args) {
     const options = {};
     for (let i = 0; i < args.length; i++) {
         const arg = args[i];
-        if (arg && arg.startsWith('--')) {
+        if (arg && arg.startsWith("--")) {
             const key = arg.slice(2);
             const nextArg = args[i + 1];
-            if (nextArg && !nextArg.startsWith('--')) {
+            if (nextArg && !nextArg.startsWith("--")) {
                 options[key] = nextArg;
                 i++;
             }
@@ -87,21 +99,21 @@ export function parseArgs(args) {
                 options[key] = true;
             }
         }
-        else if (arg && arg.startsWith('-')) {
+        else if (arg && arg.startsWith("-")) {
             switch (arg) {
-                case '-sd':
-                    options.resourceType = 'StructureDefinition';
+                case "-sd":
+                    options.resourceType = "StructureDefinition";
                     break;
-                case '-cs':
-                    options.resourceType = 'CodeSystem';
+                case "-cs":
+                    options.resourceType = "CodeSystem";
                     break;
-                case '-vs':
-                    options.resourceType = 'ValueSet';
+                case "-vs":
+                    options.resourceType = "ValueSet";
                     break;
                 default:
                     const key = arg.slice(1);
                     const nextArg = args[i + 1];
-                    if (nextArg && !nextArg.startsWith('-')) {
+                    if (nextArg && !nextArg.startsWith("-")) {
                         options[key] = nextArg;
                         i++;
                     }
@@ -117,10 +129,10 @@ export function parseArgs(args) {
     return { positional, options };
 }
 export async function loadPackageJson() {
-    const packagePath = path.join(process.cwd(), 'package.json');
+    const packagePath = path.join(process.cwd(), "package.json");
     try {
         if (fs.existsSync(packagePath)) {
-            const content = fs.readFileSync(packagePath, 'utf-8');
+            const content = fs.readFileSync(packagePath, "utf-8");
             return JSON.parse(content);
         }
     }
@@ -129,18 +141,16 @@ export async function loadPackageJson() {
     return null;
 }
 export async function savePackageJson(data) {
-    const packagePath = path.join(process.cwd(), 'package.json');
-    fs.writeFileSync(packagePath, JSON.stringify(data, null, 2) + '\n');
+    const packagePath = path.join(process.cwd(), "package.json");
+    fs.writeFileSync(packagePath, JSON.stringify(data, null, 2) + "\n");
 }
 export function getConfigFromPackageJson(packageJson) {
     const fcm = packageJson?.fcm || {};
     return {
         packages: fcm.packages || [],
         registry: fcm.registry,
-        workingDir: process.cwd()
+        workingDir: process.cwd(),
     };
 }
-if (import.meta.main) {
-    main();
-}
+main();
 //# sourceMappingURL=index.js.map

package/dist/cli/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":";AAEA,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,aAAa,EAAE,MAAM,KAAK,CAAC;AACpC,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAI/C,OAAO,EAAE,WAAW,EAAE,MAAM,WAAW,CAAC;AACxC,OAAO,EAAE,WAAW,EAAE,MAAM,WAAW,CAAC;AACxC,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAG9C,MAAM,UAAU,GAAG,aAAa,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AAClD,MAAM,SAAS,GAAG,IAAI,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC;AAC3C,MAAM,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,IAAI,EAAE,cAAc,CAAC,CAAC;AAEzE,IAAI,OAAO,GAAG,SAAS,CAAC;AACxB,IAAI,CAAC;IACH,MAAM,WAAW,GAAG,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC,YAAY,CAAC,eAAe,EAAE,OAAO,CAAC,CAAC,CAAC;IAC1E,OAAO,GAAG,WAAW,CAAC,OAAO,CAAC;AAChC,CAAC;AAAC,OAAO,KAAK,EAAE,CAAC;IAEf,OAAO,GAAG,OAAO,CAAC;AACpB,CAAC;AAED,SAAS,QAAQ;IACf,OAAO,CAAC,GAAG,CAAC;;;;;;;;;;;;;;;;;;;;CAoBb,CAAC,CAAC;AACH,CAAC;AAED,KAAK,UAAU,IAAI;IACjB,MAAM,IAAI,GAAG,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;IACnC,MAAM,OAAO,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;IAExB,IAAI,CAAC,OAAO,IAAI,OAAO,KAAK,QAAQ,IAAI,OAAO,KAAK,IAAI,EAAE,CAAC;QACzD,QAAQ,EAAE,CAAC;QACX,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,OAAO;QACT,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,IAAI,OAAO,KAAK,WAAW,IAAI,OAAO,KAAK,IAAI,EAAE,CAAC;QAChD,OAAO,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC;QACrB,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,OAAO;QACT,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,QAAQ,GAAsD;QAClE,IAAI,EAAE,WAAW;QACjB,IAAI,EAAE,WAAW;QACjB,MAAM,EAAE,aAAa;QACrB,OAAO,EAAE,cAAc;KACxB,CAAC;IAEF,IAAI,CAAC,QAAQ,CAAC,OAAO,CAAC,EAAE,CAAC;QACvB,OAAO,CAAC,KAAK,CAAC,2BAA2B,OAAO,GAAG,CAAC,CAAC;QACrD,OAAO,CAAC,KAAK,CAAC,wCAAwC,CAAC,CAAC;QACxD,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,IAAI,KAAK,CAAC,oBAAoB,OAAO,GAAG,CAAC,CAAC;QAClD,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,IAAI,CAAC;QACH,MAAM,QAAQ,CAAC,OAAO,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;IACzC,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CACX,UAAU,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CACnE,CAAC;QACF,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,KAAK,CAAC;QACd,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC;AAGD,MAAM,UAAU,SAAS,CAAC,IAAc;IAItC,MAAM,UAAU,GAAa,EAAE,CAAC;IAChC,MAAM,OAAO,GAAqC,EAAE,CAAC;IAErD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACrC,MAAM,GAAG,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC;QACpB,IAAI,GAAG,IAAI,GAAG,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC;YAChC,MAAM,GAAG,GAAG,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;YACzB,MAAM,OAAO,GAAG,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;YAC5B,IAAI,OAAO,IAAI,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC;gBACzC,OAAO,CAAC,GAAG,CAAC,GAAG,OAAO,CAAC;gBACvB,CAAC,EAAE,CAAC;YACN,CAAC;iBAAM,CAAC;gBACN,OAAO,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC;YACtB,CAAC;QACH,CAAC;aAAM,IAAI,GAAG,IAAI,GAAG,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;YAEtC,QAAQ,GAAG,EAAE,CAAC;gBACZ,KAAK,KAAK;oBACR,OAAO,CAAC,YAAY,GAAG,qBAAqB,CAAC;oBAC7C,MAAM;gBACR,KAAK,KAAK;oBACR,OAAO,CAAC,YAAY,GAAG,YAAY,CAAC;oBACpC,MAAM;gBACR,KAAK,KAAK;oBACR,OAAO,CAAC,YAAY,GAAG,UAAU,CAAC;oBAClC,MAAM;gBACR;oBAEE,MAAM,GAAG,GAAG,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;oBACzB,MAAM,OAAO,GAAG,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;oBAC5B,IAAI,OAAO,IAAI,CAAC,OAAO,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;wBACxC,OAAO,CAAC,GAAG,CAAC,GAAG,OAAO,CAAC;wBACvB,CAAC,EAAE,CAAC;oBACN,CAAC;yBAAM,CAAC;wBACN,OAAO,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC;oBACtB,CAAC;YACL,CAAC;QACH,CAAC;aAAM,IAAI,GAAG,EAAE,CAAC;YACf,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACvB,CAAC;IACH,CAAC;IAED,OAAO,EAAE,UAAU,EAAE,OAAO,EAAE,CAAC;AACjC,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,eAAe;IACnC,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,cAAc,CAAC,CAAC;IAC7D,IAAI,CAAC;QACH,IAAI,EAAE,CAAC,UAAU,CAAC,WAAW,CAAC,EAAE,CAAC;YAC/B,MAAM,OAAO,GAAG,EAAE,CAAC,YAAY,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;YACtD,OAAO,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QAC7B,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;IAEjB,CAAC;IACD,OAAO,IAAI,CAAC;AACd,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,eAAe,CAAC,IAAS;IAC7C,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,cAAc,CAAC,CAAC;IAC7D,EAAE,CAAC,aAAa,CAAC,WAAW,EAAE,IAAI,CAAC,SAAS,CAAC,IAAI,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC;AACtE,CAAC;AAED,MAAM,UAAU,wBAAwB,CAAC,WAAgB;IACvD,MAAM,GAAG,GAAG,WAAW,EAAE,GAAG,IAAI,EAAE,CAAC;IACnC,OAAO;QACL,QAAQ,EAAE,GAAG,CAAC,QAAQ,IAAI,EAAE;QAC5B,QAAQ,EAAE,GAAG,CAAC,QAAQ;QACtB,UAAU,EAAE,OAAO,CAAC,GAAG,EAAE;KAC1B,CAAC;AACJ,CAAC;AAED,IAAI,EAAE,CAAC"}

package/dist/cli/init.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/cli/init.ts"],"names":[],"mappings":"AAMA,wBAAsB,WAAW,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAgG/D"}
+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/cli/init.ts"],"names":[],"mappings":"AASA,wBAAsB,WAAW,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA0G/D"}

package/dist/cli/init.js

@@ -1,8 +1,10 @@
-import * as fs from 'fs';
-import * as path from 'path';
-import { $ } from '../compat.js';
-import { parseArgs, loadPackageJson, savePackageJson } from './index.js';
-import { CanonicalManager } from '../index.js';
+import * as fs from "fs";
+import * as path from "path";
+import { exec } from "child_process";
+import { promisify } from "util";
+import { parseArgs, loadPackageJson, savePackageJson } from "./index.js";
+import { CanonicalManager } from "../index.js";
+const execAsync = promisify(exec);
 export async function initCommand(args) {
     const { positional, options } = parseArgs(args);
     const packages = positional;
@@ -13,13 +15,15 @@ export async function initCommand(args) {
         packageJson = {
             name: path.basename(process.cwd()),
             version: "1.0.0",
-            type: "module"
+            type: "module",
         };
     }
     if (!packageJson.fcm) {
         packageJson.fcm = {
             packages: [],
-            registry: registry || "https://fs.get-ig.org/pkgs"
+            registry: registry
+                ? (registry.endsWith('/') ? registry : `${registry}/`)
+                : "https://fs.get-ig.org/pkgs/",
         };
     }
     const packagesToInstall = packages.length > 0 ? packages : packageJson.fcm.packages;
@@ -27,6 +31,9 @@ export async function initCommand(args) {
         console.error("Error: No packages specified");
         console.error("Usage: fcm init [packages...]");
         console.error("Example: fcm init hl7.fhir.r4.core hl7.fhir.us.core@5.0.1");
+        if (process.env.NODE_ENV === 'test') {
+            throw new Error("No packages specified");
+        }
         process.exit(1);
     }
     const existingPackages = new Set(packageJson.fcm.packages);
@@ -35,7 +42,7 @@ export async function initCommand(args) {
     });
     packageJson.fcm.packages = Array.from(existingPackages);
     if (registry) {
-        packageJson.fcm.registry = registry;
+        packageJson.fcm.registry = registry.endsWith('/') ? registry : `${registry}/`;
     }
     if (!packageJson.dependencies) {
         packageJson.dependencies = {};
@@ -48,12 +55,13 @@ export async function initCommand(args) {
     for (const pkg of packagesToInstall) {
         console.log(`Installing ${pkg}...`);
         try {
-            if (packageJson.fcm.registry) {
-                await $ `npm install ${pkg} --registry ${packageJson.fcm.registry}`.quiet();
-            }
-            else {
-                await $ `npm install ${pkg}`.quiet();
-            }
+            const command = packageJson.fcm.registry
+                ? `npm install ${pkg} --registry ${packageJson.fcm.registry}`
+                : `npm install ${pkg}`;
+            await execAsync(command, {
+                cwd: process.cwd(),
+                maxBuffer: 10 * 1024 * 1024,
+            });
         }
         catch (error) {
             console.error(`Failed to install ${pkg}`);
@@ -61,15 +69,16 @@ export async function initCommand(args) {
         }
     }
     console.log("Building package index...");
+    console.log("Registry", packageJson?.fcm?.registry);
     const manager = CanonicalManager({
         packages: packageJson.fcm.packages,
         workingDir: process.cwd(),
-        registry: packageJson.fcm.registry
+        registry: packageJson.fcm.registry,
     });
     await manager.init();
     const installedPackages = await manager.packages();
     console.log("\nInstalled packages:");
-    installedPackages.forEach(pkg => {
+    installedPackages.forEach((pkg) => {
         console.log(`  ${pkg.name}@${pkg.version}`);
     });
     await manager.destroy();

package/dist/cli/init.js.map

@@ -1 +1 @@
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package/dist/cli/list.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"list.d.ts","sourceRoot":"","sources":["../../src/cli/list.ts"],"names":[],"mappings":"AAGA,wBAAsB,WAAW,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA8E/D"}
+{"version":3,"file":"list.d.ts","sourceRoot":"","sources":["../../src/cli/list.ts"],"names":[],"mappings":"AAGA,wBAAsB,WAAW,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAoF/D"}

package/dist/cli/list.js

@@ -9,6 +9,9 @@ export async function listCommand(args) {
     if (!packageJson?.fcm?.packages || packageJson.fcm.packages.length === 0) {
         console.error("Error: No FHIR packages configured");
         console.error("Run 'fcm init' first to initialize packages");
+        if (process.env.NODE_ENV === 'test') {
+            throw new Error("No FHIR packages configured");
+        }
         process.exit(1);
     }
     const config = getConfigFromPackageJson(packageJson);
@@ -34,6 +37,9 @@ export async function listCommand(args) {
                 console.error(`Error: Package '${packageName}' not found`);
                 console.error("Available packages:");
                 packages.forEach(p => console.error(`  - ${p.name}`));
+                if (process.env.NODE_ENV === 'test') {
+                    throw new Error(`Package '${packageName}' not found`);
+                }
                 process.exit(1);
             }
             let resources = await manager.searchEntries({ package: pkg });

package/dist/cli/list.js.map

@@ -1 +1 @@
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+{"version":3,"file":"list.js","sourceRoot":"","sources":["../../src/cli/list.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,eAAe,EAAE,wBAAwB,EAAE,MAAM,YAAY,CAAC;AAClF,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAE/C,MAAM,CAAC,KAAK,UAAU,WAAW,CAAC,IAAc;IAC9C,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC;IAChD,MAAM,WAAW,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAClC,MAAM,MAAM,GAAG,OAAO,CAAC,IAAI,KAAK,IAAI,CAAC;IACrC,MAAM,UAAU,GAAG,OAAO,CAAC,IAA0B,CAAC;IAGtD,MAAM,WAAW,GAAG,MAAM,eAAe,EAAE,CAAC;IAC5C,IAAI,CAAC,WAAW,EAAE,GAAG,EAAE,QAAQ,IAAI,WAAW,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzE,OAAO,CAAC,KAAK,CAAC,oCAAoC,CAAC,CAAC;QACpD,OAAO,CAAC,KAAK,CAAC,6CAA6C,CAAC,CAAC;QAC7D,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAC;QACjD,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,MAAM,GAAG,wBAAwB,CAAC,WAAW,CAAC,CAAC;IACrD,MAAM,OAAO,GAAG,gBAAgB,CAAC,MAAa,CAAC,CAAC;IAChD,MAAM,OAAO,CAAC,IAAI,EAAE,CAAC;IAErB,IAAI,CAAC;QACH,IAAI,CAAC,WAAW,EAAE,CAAC;YAEjB,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,QAAQ,EAAE,CAAC;YAE1C,IAAI,MAAM,EAAE,CAAC;gBACX,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;YACjD,CAAC;iBAAM,CAAC;gBACN,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC;gBACzB,QAAQ,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE;oBACrB,OAAO,CAAC,GAAG,CAAC,KAAK,GAAG,CAAC,IAAI,IAAI,GAAG,CAAC,OAAO,EAAE,CAAC,CAAC;gBAC9C,CAAC,CAAC,CAAC;YACL,CAAC;QACH,CAAC;aAAM,CAAC;YAEN,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,QAAQ,EAAE,CAAC;YAC1C,MAAM,GAAG,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,WAAW,CAAC,CAAC;YAEvD,IAAI,CAAC,GAAG,EAAE,CAAC;gBACT,OAAO,CAAC,KAAK,CAAC,mBAAmB,WAAW,aAAa,CAAC,CAAC;gBAC3D,OAAO,CAAC,KAAK,CAAC,qBAAqB,CAAC,CAAC;gBACrC,QAAQ,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC;gBACtD,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;oBACpC,MAAM,IAAI,KAAK,CAAC,YAAY,WAAW,aAAa,CAAC,CAAC;gBACxD,CAAC;gBACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAClB,CAAC;YAED,IAAI,SAAS,GAAG,MAAM,OAAO,CAAC,aAAa,CAAC,EAAE,OAAO,EAAE,GAAG,EAAE,CAAC,CAAC;YAG9D,IAAI,UAAU,EAAE,CAAC;gBACf,SAAS,GAAG,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,YAAY,KAAK,UAAU,CAAC,CAAC;YACnE,CAAC;YAED,IAAI,MAAM,EAAE,CAAC;gBACX,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;YAClD,CAAC;iBAAM,CAAC;gBACN,OAAO,CAAC,GAAG,CAAC,gBAAgB,WAAW,GAAG,CAAC,CAAC;gBAE5C,IAAI,SAAS,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;oBAC3B,OAAO,CAAC,GAAG,CAAC,sBAAsB,CAAC,CAAC;gBACtC,CAAC;qBAAM,CAAC;oBAEN,MAAM,MAAM,GAAG,SAAS,CAAC,MAAM,CAAC,CAAC,GAAG,EAAE,QAAQ,EAAE,EAAE;wBAChD,MAAM,IAAI,GAAG,QAAQ,CAAC,YAAY,IAAI,QAAQ,CAAC,IAAI,IAAI,SAAS,CAAC;wBACjE,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC;4BAAE,GAAG,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;wBAC9B,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC;wBACZ,OAAO,GAAG,CAAC;oBACb,CAAC,EAAE,EAA4B,CAAC,CAAC;oBAGjC,MAAM,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,IAAI,EAAE,CAAC,OAAO,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,CAAC,EAAE,EAAE;wBACtD,OAAO,CAAC,GAAG,CAAC,KAAK,IAAI,KAAK,KAAK,EAAE,CAAC,CAAC;oBACrC,CAAC,CAAC,CAAC;oBAEH,OAAO,CAAC,GAAG,CAAC,YAAY,SAAS,CAAC,MAAM,YAAY,CAAC,CAAC;gBACxD,CAAC;YACH,CAAC;QACH,CAAC;IACH,CAAC;YAAS,CAAC;QACT,MAAM,OAAO,CAAC,OAAO,EAAE,CAAC;IAC1B,CAAC;AACH,CAAC"}

package/dist/cli/resolve.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/cli/resolve.ts"],"names":[],"mappings":"AAGA,wBAAsB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAkDlE"}
+{"version":3,"file":"resolve.d.ts","sourceRoot":"","sources":["../../src/cli/resolve.ts"],"names":[],"mappings":"AAGA,wBAAsB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA2DlE"}

package/dist/cli/resolve.js

@@ -8,12 +8,18 @@ export async function resolveCommand(args) {
         console.error("Error: Canonical URL required");
         console.error("Usage: fcm resolve <canonical-url> [--fields field1,field2]");
         console.error("Example: fcm resolve http://hl7.org/fhir/StructureDefinition/Patient");
+        if (process.env.NODE_ENV === 'test') {
+            throw new Error("Canonical URL required");
+        }
         process.exit(1);
     }
     const packageJson = await loadPackageJson();
     if (!packageJson?.fcm?.packages || packageJson.fcm.packages.length === 0) {
         console.error("Error: No FHIR packages configured");
         console.error("Run 'fcm init' first to initialize packages");
+        if (process.env.NODE_ENV === 'test') {
+            throw new Error("No FHIR packages configured");
+        }
         process.exit(1);
     }
     const config = getConfigFromPackageJson(packageJson);
@@ -37,6 +43,9 @@ export async function resolveCommand(args) {
     }
     catch (error) {
         console.error(`Error: Resource not found: ${url}`);
+        if (process.env.NODE_ENV === 'test') {
+            throw error;
+        }
         process.exit(1);
     }
     finally {

package/dist/cli/resolve.js.map

@@ -1 +1 @@
-{"version":3,"file":"resolve.js","sourceRoot":"","sources":["../../src/cli/resolve.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,eAAe,EAAE,wBAAwB,EAAE,MAAM,YAAY,CAAC;AAClF,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAE/C,MAAM,CAAC,KAAK,UAAU,cAAc,CAAC,IAAc;IACjD,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC;IAChD,MAAM,GAAG,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAC1B,MAAM,MAAM,GAAG,OAAO,CAAC,MAA4B,CAAC;IAEpD,IAAI,CAAC,GAAG,EAAE,CAAC;QACT,OAAO,CAAC,KAAK,CAAC,+BAA+B,CAAC,CAAC;QAC/C,OAAO,CAAC,KAAK,CAAC,6DAA6D,CAAC,CAAC;QAC7E,OAAO,CAAC,KAAK,CAAC,sEAAsE,CAAC,CAAC;QACtF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAGD,MAAM,WAAW,GAAG,MAAM,eAAe,EAAE,CAAC;IAC5C,IAAI,CAAC,WAAW,EAAE,GAAG,EAAE,QAAQ,IAAI,WAAW,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzE,OAAO,CAAC,KAAK,CAAC,oCAAoC,CAAC,CAAC;QACpD,OAAO,CAAC,KAAK,CAAC,6CAA6C,CAAC,CAAC;QAC7D,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,MAAM,GAAG,wBAAwB,CAAC,WAAW,CAAC,CAAC;IACrD,MAAM,OAAO,GAAG,gBAAgB,CAAC,MAAa,CAAC,CAAC;IAChD,MAAM,OAAO,CAAC,IAAI,EAAE,CAAC;IAErB,IAAI,CAAC;QAEH,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;QAE5C,IAAI,MAAM,EAAE,CAAC;YAEX,MAAM,SAAS,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;YACvD,MAAM,QAAQ,GAAQ,EAAE,CAAC;YAEzB,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE;gBACxB,IAAI,KAAK,IAAI,QAAQ,EAAE,CAAC;oBACtB,QAAQ,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC;gBACpC,CAAC;YACH,CAAC,CAAC,CAAC;YAEH,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;QACjD,CAAC;aAAM,CAAC;YAEN,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;QACjD,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,8BAA8B,GAAG,EAAE,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;YAAS,CAAC;QACT,MAAM,OAAO,CAAC,OAAO,EAAE,CAAC;IAC1B,CAAC;AACH,CAAC"}
+{"version":3,"file":"resolve.js","sourceRoot":"","sources":["../../src/cli/resolve.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,eAAe,EAAE,wBAAwB,EAAE,MAAM,YAAY,CAAC;AAClF,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAE/C,MAAM,CAAC,KAAK,UAAU,cAAc,CAAC,IAAc;IACjD,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC;IAChD,MAAM,GAAG,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IAC1B,MAAM,MAAM,GAAG,OAAO,CAAC,MAA4B,CAAC;IAEpD,IAAI,CAAC,GAAG,EAAE,CAAC;QACT,OAAO,CAAC,KAAK,CAAC,+BAA+B,CAAC,CAAC;QAC/C,OAAO,CAAC,KAAK,CAAC,6DAA6D,CAAC,CAAC;QAC7E,OAAO,CAAC,KAAK,CAAC,sEAAsE,CAAC,CAAC;QACtF,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,IAAI,KAAK,CAAC,wBAAwB,CAAC,CAAC;QAC5C,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAGD,MAAM,WAAW,GAAG,MAAM,eAAe,EAAE,CAAC;IAC5C,IAAI,CAAC,WAAW,EAAE,GAAG,EAAE,QAAQ,IAAI,WAAW,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzE,OAAO,CAAC,KAAK,CAAC,oCAAoC,CAAC,CAAC;QACpD,OAAO,CAAC,KAAK,CAAC,6CAA6C,CAAC,CAAC;QAC7D,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,IAAI,KAAK,CAAC,6BAA6B,CAAC,CAAC;QACjD,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,MAAM,GAAG,wBAAwB,CAAC,WAAW,CAAC,CAAC;IACrD,MAAM,OAAO,GAAG,gBAAgB,CAAC,MAAa,CAAC,CAAC;IAChD,MAAM,OAAO,CAAC,IAAI,EAAE,CAAC;IAErB,IAAI,CAAC;QAEH,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;QAE5C,IAAI,MAAM,EAAE,CAAC;YAEX,MAAM,SAAS,GAAG,MAAM,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;YACvD,MAAM,QAAQ,GAAQ,EAAE,CAAC;YAEzB,SAAS,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE;gBACxB,IAAI,KAAK,IAAI,QAAQ,EAAE,CAAC;oBACtB,QAAQ,CAAC,KAAK,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC;gBACpC,CAAC;YACH,CAAC,CAAC,CAAC;YAEH,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;QACjD,CAAC;aAAM,CAAC;YAEN,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,QAAQ,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC;QACjD,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,8BAA8B,GAAG,EAAE,CAAC,CAAC;QACnD,IAAI,OAAO,CAAC,GAAG,CAAC,QAAQ,KAAK,MAAM,EAAE,CAAC;YACpC,MAAM,KAAK,CAAC;QACd,CAAC;QACD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;YAAS,CAAC;QACT,MAAM,OAAO,CAAC,OAAO,EAAE,CAAC;IAC1B,CAAC;AACH,CAAC"}

package/dist/cli/search.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/cli/search.ts"],"names":[],"mappings":"AAGA,wBAAsB,aAAa,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA+FjE"}
+{"version":3,"file":"search.d.ts","sourceRoot":"","sources":["../../src/cli/search.ts"],"names":[],"mappings":"AAGA,wBAAsB,aAAa,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CA+EjE"}

package/dist/cli/search.js

@@ -12,44 +12,38 @@ export async function searchCommand(args) {
     if (!packageJson?.fcm?.packages || packageJson.fcm.packages.length === 0) {
         console.error("Error: No FHIR packages configured");
         console.error("Run 'fcm init' first to initialize packages");
+        if (process.env.NODE_ENV === 'test' || process.env.BUN_TEST) {
+            throw new Error("No FHIR packages configured");
+        }
         process.exit(1);
     }
     const config = getConfigFromPackageJson(packageJson);
     const manager = CanonicalManager(config);
     await manager.init();
     try {
-        const searchCriteria = {};
+        const filters = {};
+        if (resourceTypeFilter) {
+            filters.resourceType = resourceTypeFilter;
+        }
+        if (typeFilter) {
+            filters.type = typeFilter;
+        }
         if (kindFilter) {
-            searchCriteria.kind = kindFilter;
+            filters.kind = kindFilter;
         }
         if (packageFilter) {
             const packages = await manager.packages();
             const pkg = packages.find(p => p.name === packageFilter);
             if (!pkg) {
                 console.error(`Error: Package '${packageFilter}' not found`);
+                if (process.env.NODE_ENV === 'test' || process.env.BUN_TEST) {
+                    throw new Error(`Package '${packageFilter}' not found`);
+                }
                 process.exit(1);
             }
-            searchCriteria.package = pkg;
-        }
-        let results = await manager.searchEntries(searchCriteria);
-        if (resourceTypeFilter) {
-            results = results.filter(entry => entry.resourceType === resourceTypeFilter);
-        }
-        if (typeFilter) {
-            results = results.filter(entry => entry.type === typeFilter);
-        }
-        if (searchTerms.length > 0) {
-            const terms = searchTerms.map(t => t.toLowerCase());
-            results = results.filter(entry => {
-                if (!entry.url)
-                    return false;
-                const urlLower = entry.url.toLowerCase();
-                return terms.every(term => {
-                    const urlParts = urlLower.split(/[\/\-_\.]+/);
-                    return urlParts.some(part => part.startsWith(term));
-                });
-            });
+            filters.package = pkg;
         }
+        const results = await manager.smartSearch(searchTerms, filters);
         if (isJson) {
             console.log(JSON.stringify(results, null, 2));
         }