@atomic-ehr/fhir-canonical-manager 0.0.24 → 0.0.25

package/dist/reference.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"reference.d.ts","sourceRoot":"","sources":["../src/reference.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,SAAS,EAAE,iBAAiB,EAAE,cAAc,EAAE,MAAM,kBAAkB,CAAC;AAKrF,eAAO,MAAM,mBAAmB,GAAI,UAAU;IAC1C,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;IACvB,QAAQ,EAAE,MAAM,CAAC;CACpB,KAAG,MAGH,CAAC;AAKF,MAAM,WAAW,gBAAiB,SAAQ,cAAc;IACpD,UAAU,EAAE,OAAO,mBAAmB,CAAC;IACvC,WAAW,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,EAAE,CAAC;IACvC,eAAe,EAAE,CAAC,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,iBAAiB,KAAK,SAAS,CAAC;IACxE,gBAAgB,EAAE,MAAM,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAAC;CAC7D;AAKD,eAAO,MAAM,sBAAsB,QAAO,gBAwCzC,CAAC;AAGF,OAAO,EAAE,sBAAsB,IAAI,uBAAuB,EAAE,CAAC"}
+{"version":3,"file":"reference.d.ts","sourceRoot":"","sources":["../src/reference.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,WAAW,EAAE,cAAc,EAAE,SAAS,EAAE,iBAAiB,EAAE,cAAc,EAAE,MAAM,kBAAkB,CAAC;AAKlH,eAAO,MAAM,mBAAmB,GAAI,UAAU;IAC1C,WAAW,EAAE,WAAW,CAAC;IACzB,cAAc,EAAE,cAAc,CAAC;IAC/B,QAAQ,EAAE,MAAM,CAAC;CACpB,KAAG,MAGH,CAAC;AAKF,MAAM,WAAW,gBAAiB,SAAQ,cAAc;IACpD,UAAU,EAAE,OAAO,mBAAmB,CAAC;IACvC,WAAW,EAAE,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,EAAE,CAAC;IACvC,eAAe,EAAE,CAAC,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,iBAAiB,KAAK,SAAS,CAAC;IACxE,gBAAgB,EAAE,MAAM,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAAC;CAC7D;AAKD,eAAO,MAAM,sBAAsB,QAAO,gBAwCzC,CAAC"}

package/dist/reference.js

@@ -41,5 +41,4 @@ export const createReferenceManager = () => {
         getAllReferences: () => references,
     };
 };
-export { createReferenceManager as ReferenceManagerFactory };
 //# sourceMappingURL=reference.js.map

package/dist/reference.js.map

@@ -1 +1 @@
-{"version":3,"file":"reference.js","sourceRoot":"","sources":["../src/reference.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAMzC,MAAM,CAAC,MAAM,mBAAmB,GAAG,CAAC,QAInC,EAAU,EAAE;IACT,MAAM,KAAK,GAAG,GAAG,QAAQ,CAAC,WAAW,IAAI,QAAQ,CAAC,cAAc,IAAI,QAAQ,CAAC,QAAQ,EAAE,CAAC;IACxF,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;AAClE,CAAC,CAAC;AAeF,MAAM,CAAC,MAAM,sBAAsB,GAAG,GAAqB,EAAE;IACzD,MAAM,UAAU,GAAsC,EAAE,CAAC;IACzD,MAAM,QAAQ,GAA6B,EAAE,CAAC;IAE9C,MAAM,GAAG,GAAG,CAAC,EAAU,EAAE,QAA2B,EAAQ,EAAE;QAC1D,UAAU,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC;QAC1B,IAAI,QAAQ,CAAC,GAAG,EAAE,CAAC;YACf,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC;gBAC1B,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;YAChC,CAAC;YACD,MAAM,GAAG,GAAG,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC;YACnC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,CAAC,EAAE,CAAC;gBAC3B,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;YACjB,CAAC;QACL,CAAC;IACL,CAAC,CAAC;IAEF,MAAM,KAAK,GAAG,GAAS,EAAE;QACrB,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,EAAE,EAAE;YACpC,OAAO,UAAU,CAAC,GAAG,CAAC,CAAC;QAC3B,CAAC,CAAC,CAAC;QACH,MAAM,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,EAAE,EAAE;YAClC,OAAO,QAAQ,CAAC,GAAG,CAAC,CAAC;QACzB,CAAC,CAAC,CAAC;IACP,CAAC,CAAC;IAEF,OAAO;QACH,UAAU,EAAE,mBAAmB;QAC/B,GAAG,EAAE,CAAC,EAAU,EAAE,EAAE,CAAC,UAAU,CAAC,EAAE,CAAC;QACnC,GAAG;QACH,GAAG,EAAE,CAAC,EAAU,EAAE,EAAE,CAAC,EAAE,IAAI,UAAU;QACrC,KAAK;QACL,IAAI,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC,MAAM;QAC1C,WAAW,EAAE,CAAC,GAAW,EAAE,EAAE,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,EAAE;QACjD,eAAe,EAAE,CAAC,EAAU,EAAE,QAA2B,EAAa,EAAE,CAAC,CAAC;YACtE,EAAE;YACF,YAAY,EAAE,QAAQ,CAAC,YAAY;SACtC,CAAC;QACF,gBAAgB,EAAE,GAAG,EAAE,CAAC,UAAU;KACrC,CAAC;AACN,CAAC,CAAC;AAGF,OAAO,EAAE,sBAAsB,IAAI,uBAAuB,EAAE,CAAC"}
+{"version":3,"file":"reference.js","sourceRoot":"","sources":["../src/reference.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAMzC,MAAM,CAAC,MAAM,mBAAmB,GAAG,CAAC,QAInC,EAAU,EAAE;IACT,MAAM,KAAK,GAAG,GAAG,QAAQ,CAAC,WAAW,IAAI,QAAQ,CAAC,cAAc,IAAI,QAAQ,CAAC,QAAQ,EAAE,CAAC;IACxF,OAAO,UAAU,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;AAClE,CAAC,CAAC;AAeF,MAAM,CAAC,MAAM,sBAAsB,GAAG,GAAqB,EAAE;IACzD,MAAM,UAAU,GAAsC,EAAE,CAAC;IACzD,MAAM,QAAQ,GAA6B,EAAE,CAAC;IAE9C,MAAM,GAAG,GAAG,CAAC,EAAU,EAAE,QAA2B,EAAQ,EAAE;QAC1D,UAAU,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC;QAC1B,IAAI,QAAQ,CAAC,GAAG,EAAE,CAAC;YACf,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC;gBAC1B,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;YAChC,CAAC;YACD,MAAM,GAAG,GAAG,QAAQ,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC;YACnC,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,EAAE,CAAC,EAAE,CAAC;gBAC3B,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;YACjB,CAAC;QACL,CAAC;IACL,CAAC,CAAC;IAEF,MAAM,KAAK,GAAG,GAAS,EAAE;QACrB,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,EAAE,EAAE;YACpC,OAAO,UAAU,CAAC,GAAG,CAAC,CAAC;QAC3B,CAAC,CAAC,CAAC;QACH,MAAM,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,GAAG,EAAE,EAAE;YAClC,OAAO,QAAQ,CAAC,GAAG,CAAC,CAAC;QACzB,CAAC,CAAC,CAAC;IACP,CAAC,CAAC;IAEF,OAAO;QACH,UAAU,EAAE,mBAAmB;QAC/B,GAAG,EAAE,CAAC,EAAU,EAAE,EAAE,CAAC,UAAU,CAAC,EAAE,CAAC;QACnC,GAAG;QACH,GAAG,EAAE,CAAC,EAAU,EAAE,EAAE,CAAC,EAAE,IAAI,UAAU;QACrC,KAAK;QACL,IAAI,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC,MAAM;QAC1C,WAAW,EAAE,CAAC,GAAW,EAAE,EAAE,CAAC,QAAQ,CAAC,GAAG,CAAC,IAAI,EAAE;QACjD,eAAe,EAAE,CAAC,EAAU,EAAE,QAA2B,EAAa,EAAE,CAAC,CAAC;YACtE,EAAE;YACF,YAAY,EAAE,QAAQ,CAAC,YAAY;SACtC,CAAC;QACF,gBAAgB,EAAE,GAAG,EAAE,CAAC,UAAU;KACrC,CAAC;AACN,CAAC,CAAC"}

package/dist/scanner/directory.d.ts

@@ -1,6 +1,4 @@
 import type { ExtendedCache } from "../cache.js";
-import type { PreprocessContext } from "../types/index.js";
-export declare const loadPackagesIntoCache: (cache: ExtendedCache, pwd: string, preprocessPackage?: (context: PreprocessContext) => PreprocessContext, options?: {
-    ignorePackageIndex?: boolean;
-}) => Promise<void>;
+import { type ScanOptions } from "./package.js";
+export declare const loadPackagesIntoCache: (cache: ExtendedCache, pwd: string, options: ScanOptions) => Promise<void>;
 //# sourceMappingURL=directory.d.ts.map

package/dist/scanner/directory.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"directory.d.ts","sourceRoot":"","sources":["../../src/scanner/directory.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AACjD,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AAG3D,eAAO,MAAM,qBAAqB,GAC9B,OAAO,aAAa,EACpB,KAAK,MAAM,EACX,oBAAoB,CAAC,OAAO,EAAE,iBAAiB,KAAK,iBAAiB,EACrE,UAAU;IAAE,kBAAkB,CAAC,EAAE,OAAO,CAAA;CAAE,KAC3C,OAAO,CAAC,IAAI,CAyBd,CAAC"}
+{"version":3,"file":"directory.d.ts","sourceRoot":"","sources":["../../src/scanner/directory.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AACjD,OAAO,EAAe,KAAK,WAAW,EAAE,MAAM,cAAc,CAAC;AAE7D,eAAO,MAAM,qBAAqB,GAAU,OAAO,aAAa,EAAE,KAAK,MAAM,EAAE,SAAS,WAAW,KAAG,OAAO,CAAC,IAAI,CAyBjH,CAAC"}

package/dist/scanner/directory.js

@@ -1,7 +1,7 @@
 import * as fs from "node:fs/promises";
 import * as path from "node:path";
 import { loadPackage } from "./package.js";
-export const loadPackagesIntoCache = async (cache, pwd, preprocessPackage, options) => {
+export const loadPackagesIntoCache = async (cache, pwd, options) => {
     const nodeModulesPath = path.join(pwd, "node_modules");
     const entries = await fs.readdir(nodeModulesPath, { withFileTypes: true });
     const warnings = [];
@@ -14,13 +14,13 @@ export const loadPackagesIntoCache = async (cache, pwd, preprocessPackage, optio
             for (const scopedEntry of scopedEntries) {
                 if (!scopedEntry.isDirectory())
                     continue;
-                const w = await loadPackage(path.join(packagePath, scopedEntry.name), cache, preprocessPackage, options);
+                const w = await loadPackage(path.join(packagePath, scopedEntry.name), cache, options);
                 if (w)
                     warnings.push(w);
             }
         }
         else {
-            const w = await loadPackage(packagePath, cache, preprocessPackage, options);
+            const w = await loadPackage(packagePath, cache, options);
             if (w)
                 warnings.push(w);
         }

package/dist/scanner/directory.js.map

@@ -1 +1 @@
-{"version":3,"file":"directory.js","sourceRoot":"","sources":["../../src/scanner/directory.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAGlC,OAAO,EAAE,WAAW,EAAE,MAAM,cAAc,CAAC;AAE3C,MAAM,CAAC,MAAM,qBAAqB,GAAG,KAAK,EACtC,KAAoB,EACpB,GAAW,EACX,iBAAqE,EACrE,OAA0C,EAC7B,EAAE;IACf,MAAM,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,cAAc,CAAC,CAAC;IACvD,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,eAAe,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;IAC3E,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;QAC1B,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE;YAAE,SAAS;QACnC,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC;QAE5D,IAAI,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;YAC7B,MAAM,aAAa,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;YAC7E,KAAK,MAAM,WAAW,IAAI,aAAa,EAAE,CAAC;gBACtC,IAAI,CAAC,WAAW,CAAC,WAAW,EAAE;oBAAE,SAAS;gBACzC,MAAM,CAAC,GAAG,MAAM,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,WAAW,CAAC,IAAI,CAAC,EAAE,KAAK,EAAE,iBAAiB,EAAE,OAAO,CAAC,CAAC;gBACzG,IAAI,CAAC;oBAAE,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAC5B,CAAC;QACL,CAAC;aAAM,CAAC;YACJ,MAAM,CAAC,GAAG,MAAM,WAAW,CAAC,WAAW,EAAE,KAAK,EAAE,iBAAiB,EAAE,OAAO,CAAC,CAAC;YAC5E,IAAI,CAAC;gBAAE,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC5B,CAAC;IACL,CAAC;IAED,IAAI,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACtB,OAAO,CAAC,IAAI,CAAC,cAAc,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC7E,CAAC;AACL,CAAC,CAAC"}
+{"version":3,"file":"directory.js","sourceRoot":"","sources":["../../src/scanner/directory.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAElC,OAAO,EAAE,WAAW,EAAoB,MAAM,cAAc,CAAC;AAE7D,MAAM,CAAC,MAAM,qBAAqB,GAAG,KAAK,EAAE,KAAoB,EAAE,GAAW,EAAE,OAAoB,EAAiB,EAAE;IAClH,MAAM,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,GAAG,EAAE,cAAc,CAAC,CAAC;IACvD,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,eAAe,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;IAC3E,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;QAC1B,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE;YAAE,SAAS;QACnC,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,KAAK,CAAC,UAAU,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC;QAE5D,IAAI,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;YAC7B,MAAM,aAAa,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,WAAW,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;YAC7E,KAAK,MAAM,WAAW,IAAI,aAAa,EAAE,CAAC;gBACtC,IAAI,CAAC,WAAW,CAAC,WAAW,EAAE;oBAAE,SAAS;gBACzC,MAAM,CAAC,GAAG,MAAM,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,WAAW,CAAC,IAAI,CAAC,EAAE,KAAK,EAAE,OAAO,CAAC,CAAC;gBACtF,IAAI,CAAC;oBAAE,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAC5B,CAAC;QACL,CAAC;aAAM,CAAC;YACJ,MAAM,CAAC,GAAG,MAAM,WAAW,CAAC,WAAW,EAAE,KAAK,EAAE,OAAO,CAAC,CAAC;YACzD,IAAI,CAAC;gBAAE,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAC5B,CAAC;IACL,CAAC;IAED,IAAI,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACtB,OAAO,CAAC,IAAI,CAAC,cAAc,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAC7E,CAAC;AACL,CAAC,CAAC"}

package/dist/scanner/index.d.ts

@@ -1,5 +1,5 @@
-export { loadPackagesIntoCache as scanDirectory } from "./directory.js";
-export { loadPackage } from "./package.js";
+export { loadPackagesIntoCache } from "./directory.js";
+export { loadPackage, type ScanOptions } from "./package.js";
 export { isValidFileEntry, isValidIndexFile, parseIndex } from "./parser.js";
 export { processIndex } from "./processor.js";
 //# sourceMappingURL=index.d.ts.map

package/dist/scanner/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/scanner/index.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,qBAAqB,IAAI,aAAa,EAAE,MAAM,gBAAgB,CAAC;AACxE,OAAO,EAAE,WAAW,EAAE,MAAM,cAAc,CAAC;AAC3C,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/scanner/index.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,qBAAqB,EAAE,MAAM,gBAAgB,CAAC;AACvD,OAAO,EAAE,WAAW,EAAE,KAAK,WAAW,EAAE,MAAM,cAAc,CAAC;AAC7D,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC"}

package/dist/scanner/index.js

@@ -1,4 +1,4 @@
-export { loadPackagesIntoCache as scanDirectory } from "./directory.js";
+export { loadPackagesIntoCache } from "./directory.js";
 export { loadPackage } from "./package.js";
 export { isValidFileEntry, isValidIndexFile, parseIndex } from "./parser.js";
 export { processIndex } from "./processor.js";

package/dist/scanner/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/scanner/index.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,qBAAqB,IAAI,aAAa,EAAE,MAAM,gBAAgB,CAAC;AACxE,OAAO,EAAE,WAAW,EAAE,MAAM,cAAc,CAAC;AAC3C,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/scanner/index.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,qBAAqB,EAAE,MAAM,gBAAgB,CAAC;AACvD,OAAO,EAAE,WAAW,EAAoB,MAAM,cAAc,CAAC;AAC7D,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC"}

package/dist/scanner/package.d.ts

@@ -1,6 +1,9 @@
 import type { ExtendedCache } from "../cache.js";
-import type { PreprocessContext } from "../types/index.js";
-export declare const loadPackage: (packagePath: string, cache: ExtendedCache, preprocessPackage?: (context: PreprocessContext) => PreprocessContext, options?: {
-    ignorePackageIndex?: boolean;
-}) => Promise<string | undefined>;
+import type { PackageIndexMode, Patches, PatchReportSink } from "../types/index.js";
+export type ScanOptions = {
+    packageIndexMode: PackageIndexMode;
+    patches: Patches;
+    report: PatchReportSink;
+};
+export declare const loadPackage: (packagePath: string, cache: ExtendedCache, options: ScanOptions) => Promise<string | undefined>;
 //# sourceMappingURL=package.d.ts.map

package/dist/scanner/package.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"package.d.ts","sourceRoot":"","sources":["../../src/scanner/package.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAEjD,OAAO,KAAK,EAA2B,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AAiFpF,eAAO,MAAM,WAAW,GACpB,aAAa,MAAM,EACnB,OAAO,aAAa,EACpB,oBAAoB,CAAC,OAAO,EAAE,iBAAiB,KAAK,iBAAiB,EACrE,UAAU;IAAE,kBAAkB,CAAC,EAAE,OAAO,CAAA;CAAE,KAC3C,OAAO,CAAC,MAAM,GAAG,SAAS,CA4D5B,CAAC"}
+{"version":3,"file":"package.d.ts","sourceRoot":"","sources":["../../src/scanner/package.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,OAAO,KAAK,EAAE,gBAAgB,EAAe,OAAO,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAajG,MAAM,MAAM,WAAW,GAAG;IACtB,gBAAgB,EAAE,gBAAgB,CAAC;IAEnC,OAAO,EAAE,OAAO,CAAC;IAEjB,MAAM,EAAE,eAAe,CAAC;CAC3B,CAAC;AA+DF,eAAO,MAAM,WAAW,GACpB,aAAa,MAAM,EACnB,OAAO,aAAa,EACpB,SAAS,WAAW,KACrB,OAAO,CAAC,MAAM,GAAG,SAAS,CA8C5B,CAAC"}

package/dist/scanner/package.js

@@ -1,62 +1,8 @@
 import * as fs from "node:fs/promises";
 import * as path from "node:path";
 import { fileExists } from "../fs/index.js";
-import { processIndex } from "./processor.js";
-const scanDirectoryForResources = async (dirPath, packageJson, cache) => {
-    let count = 0;
-    try {
-        const entries = await fs.readdir(dirPath, { withFileTypes: true });
-        for (const entry of entries) {
-            if (!entry.isFile() || !entry.name.endsWith(".json"))
-                continue;
-            if (entry.name === "package.json" || entry.name === ".index.json")
-                continue;
-            const filePath = path.join(dirPath, entry.name);
-            try {
-                const content = await fs.readFile(filePath, "utf-8");
-                const resource = JSON.parse(content);
-                if (!resource.resourceType || !resource.url)
-                    continue;
-                const id = cache.referenceManager.generateId({
-                    packageName: packageJson.name,
-                    packageVersion: packageJson.version,
-                    filePath,
-                });
-                cache.referenceManager.set(id, {
-                    packageName: packageJson.name,
-                    packageVersion: packageJson.version,
-                    filePath,
-                    resourceType: resource.resourceType,
-                    url: resource.url,
-                    version: resource.version,
-                });
-                const indexEntry = {
-                    id,
-                    resourceType: resource.resourceType,
-                    indexVersion: 0,
-                    url: resource.url,
-                    version: resource.version,
-                    kind: resource.kind,
-                    type: resource.type,
-                    package: {
-                        name: packageJson.name,
-                        version: packageJson.version,
-                    },
-                };
-                if (!cache.entries[resource.url]) {
-                    cache.entries[resource.url] = [];
-                }
-                cache.entries[resource.url]?.push(indexEntry);
-                count++;
-            }
-            catch {
-            }
-        }
-    }
-    catch {
-    }
-    return count;
-};
+import { applyPatches } from "../patches.js";
+import { collectFromDirectory, collectFromIndex, commitEntries } from "./processor.js";
 const CORE_PACKAGE_PATTERN = /^hl7\.fhir\.r\d+\.core$/;
 const isCorePackage = (name) => CORE_PACKAGE_PATTERN.test(name);
 const hasCorePackageDependency = (dependencies) => {
@@ -64,7 +10,42 @@ const hasCorePackageDependency = (dependencies) => {
         return false;
     return Object.keys(dependencies).some(isCorePackage);
 };
-export const loadPackage = async (packagePath, cache, preprocessPackage, options) => {
+const loadResources = async (packagePath, packageJson, cache, mode, patches, report) => {
+    const pkgId = `${packageJson.name}@${packageJson.version}`;
+    if (mode === "regenerate" || !(await fileExists(path.join(packagePath, ".index.json")))) {
+        const count = commitEntries(cache, packageJson, await collectFromDirectory(packagePath), patches, report);
+        if (count > 0) {
+            console.warn(`Warning: index generated for ${packageJson.name} (${count} resources)`);
+        }
+        return { count, usedIndex: false };
+    }
+    const { result, entries } = await collectFromIndex(packagePath);
+    if (!result.ok) {
+        if (mode === "recover") {
+            console.warn(`Recovered ${pkgId}: .index.json is ${result.reason}; scanning directory instead.`);
+            const count = commitEntries(cache, packageJson, await collectFromDirectory(packagePath), patches, report);
+            report({
+                kind: "index-recovery",
+                package: { name: packageJson.name, version: packageJson.version },
+                reason: result.reason,
+                recovered: count,
+            });
+            return { count, usedIndex: false };
+        }
+        const count = commitEntries(cache, packageJson, entries, patches, report);
+        console.warn(`Warning: ${pkgId} .index.json is ${result.reason}; loaded ${count} resource(s). ` +
+            `Set packageIndex: "recover" to fall back to a directory scan.`);
+        return { count, usedIndex: true };
+    }
+    let count = commitEntries(cache, packageJson, entries, patches, report);
+    const examplesPath = path.join(packagePath, "examples");
+    if (await fileExists(path.join(examplesPath, ".index.json"))) {
+        count += commitEntries(cache, packageJson, (await collectFromIndex(examplesPath)).entries, patches, report);
+    }
+    return { count, usedIndex: true };
+};
+export const loadPackage = async (packagePath, cache, options) => {
+    const { packageIndexMode: mode, patches, report } = options;
     const packageJsonPath = path.join(packagePath, "package.json");
     if (!(await fileExists(packageJsonPath)))
         return undefined;
@@ -72,15 +53,9 @@ export const loadPackage = async (packagePath, cache, preprocessPackage, options
     try {
         const content = await fs.readFile(packageJsonPath, "utf-8");
         let parsed = JSON.parse(content);
-        if (preprocessPackage) {
-            const result = preprocessPackage({
-                kind: "package",
-                packageJson: parsed,
-                package: { name: parsed.name, version: parsed.version },
-            });
-            if (result.kind === "package")
-                parsed = result.packageJson;
-        }
+        const result = applyPatches(patches.packageJson, { name: parsed.name, version: parsed.version }, parsed, report);
+        if (result)
+            parsed = result;
         packageJson = parsed;
     }
     catch {
@@ -93,28 +68,13 @@ export const loadPackage = async (packagePath, cache, preprocessPackage, options
         fhirVersions: packageJson.fhirVersions,
         packageJson,
     };
-    const hasIndex = !options?.ignorePackageIndex && (await fileExists(path.join(packagePath, ".index.json")));
+    const { count, usedIndex } = await loadResources(packagePath, packageJson, cache, mode, patches, report);
+    if (count === 0)
+        return undefined;
     const hasFhirVersions = Array.isArray(packageJson.fhirVersions) && packageJson.fhirVersions.length > 0;
     const hasCoreDep = isCorePackage(packageJson.name) || hasCorePackageDependency(packageJson.dependencies);
-    let resourceCount = 0;
-    if (hasIndex) {
-        await processIndex(packagePath, packageJson, cache);
-        const examplesPath = path.join(packagePath, "examples");
-        if (await fileExists(path.join(examplesPath, ".index.json"))) {
-            await processIndex(examplesPath, packageJson, cache);
-        }
-        resourceCount = 1;
-    }
-    else {
-        resourceCount = await scanDirectoryForResources(packagePath, packageJson, cache);
-        if (resourceCount > 0) {
-            console.warn(`Warning: index generated for ${packageJson.name} (${resourceCount} resources)`);
-        }
-    }
-    if (resourceCount === 0)
-        return undefined;
     const issues = [];
-    if (!hasIndex)
+    if (!usedIndex)
         issues.push("no .index.json");
     if (!hasFhirVersions)
         issues.push("no fhirVersions");

package/dist/scanner/package.js.map

@@ -1 +1 @@
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+{"version":3,"file":"package.js","sourceRoot":"","sources":["../../src/scanner/package.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAElC,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC5C,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAE7C,OAAO,EAAE,oBAAoB,EAAE,gBAAgB,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AAEvF,MAAM,oBAAoB,GAAG,yBAAyB,CAAC;AAEvD,MAAM,aAAa,GAAG,CAAC,IAAY,EAAW,EAAE,CAAC,oBAAoB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AAEjF,MAAM,wBAAwB,GAAG,CAAC,YAAgD,EAAW,EAAE;IAC3F,IAAI,CAAC,YAAY;QAAE,OAAO,KAAK,CAAC;IAChC,OAAO,MAAM,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;AACzD,CAAC,CAAC;AAiBF,MAAM,aAAa,GAAG,KAAK,EACvB,WAAmB,EACnB,WAAwB,EACxB,KAAoB,EACpB,IAAsB,EACtB,OAAgB,EAChB,MAAuB,EACuB,EAAE;IAChD,MAAM,KAAK,GAAG,GAAG,WAAW,CAAC,IAAI,IAAI,WAAW,CAAC,OAAO,EAAE,CAAC;IAG3D,IAAI,IAAI,KAAK,YAAY,IAAI,CAAC,CAAC,MAAM,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,aAAa,CAAC,CAAC,CAAC,EAAE,CAAC;QACtF,MAAM,KAAK,GAAG,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,MAAM,oBAAoB,CAAC,WAAW,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;QAC1G,IAAI,KAAK,GAAG,CAAC,EAAE,CAAC;YACZ,OAAO,CAAC,IAAI,CAAC,gCAAgC,WAAW,CAAC,IAAI,KAAK,KAAK,aAAa,CAAC,CAAC;QAC1F,CAAC;QACD,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,KAAK,EAAE,CAAC;IACvC,CAAC;IAED,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,gBAAgB,CAAC,WAAW,CAAC,CAAC;IAGhE,IAAI,CAAC,MAAM,CAAC,EAAE,EAAE,CAAC;QACb,IAAI,IAAI,KAAK,SAAS,EAAE,CAAC;YACrB,OAAO,CAAC,IAAI,CAAC,aAAa,KAAK,oBAAoB,MAAM,CAAC,MAAM,+BAA+B,CAAC,CAAC;YACjG,MAAM,KAAK,GAAG,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,MAAM,oBAAoB,CAAC,WAAW,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;YAC1G,MAAM,CAAC;gBACH,IAAI,EAAE,gBAAgB;gBACtB,OAAO,EAAE,EAAE,IAAI,EAAE,WAAW,CAAC,IAAI,EAAE,OAAO,EAAE,WAAW,CAAC,OAAO,EAAE;gBACjE,MAAM,EAAE,MAAM,CAAC,MAAM;gBACrB,SAAS,EAAE,KAAK;aACnB,CAAC,CAAC;YACH,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,KAAK,EAAE,CAAC;QACvC,CAAC;QACD,MAAM,KAAK,GAAG,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;QAC1E,OAAO,CAAC,IAAI,CACR,YAAY,KAAK,mBAAmB,MAAM,CAAC,MAAM,YAAY,KAAK,gBAAgB;YAC9E,+DAA+D,CACtE,CAAC;QACF,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;IACtC,CAAC;IAGD,IAAI,KAAK,GAAG,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;IACxE,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,UAAU,CAAC,CAAC;IACxD,IAAI,MAAM,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,YAAY,EAAE,aAAa,CAAC,CAAC,EAAE,CAAC;QAC3D,KAAK,IAAI,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,CAAC,MAAM,gBAAgB,CAAC,YAAY,CAAC,CAAC,CAAC,OAAO,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;IAChH,CAAC;IACD,OAAO,EAAE,KAAK,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;AACtC,CAAC,CAAC;AAMF,MAAM,CAAC,MAAM,WAAW,GAAG,KAAK,EAC5B,WAAmB,EACnB,KAAoB,EACpB,OAAoB,EACO,EAAE;IAC7B,MAAM,EAAE,gBAAgB,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC;IAE5D,MAAM,eAAe,GAAG,IAAI,CAAC,IAAI,CAAC,WAAW,EAAE,cAAc,CAAC,CAAC;IAC/D,IAAI,CAAC,CAAC,MAAM,UAAU,CAAC,eAAe,CAAC,CAAC;QAAE,OAAO,SAAS,CAAC;IAE3D,IAAI,WAAwB,CAAC;IAC7B,IAAI,CAAC;QACD,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,eAAe,EAAE,OAAO,CAAC,CAAC;QAC5D,IAAI,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC;QACjC,MAAM,MAAM,GAAG,YAAY,CACvB,OAAO,CAAC,WAAW,EACnB,EAAE,IAAI,EAAE,MAAM,CAAC,IAAI,EAAE,OAAO,EAAE,MAAM,CAAC,OAAO,EAAE,EAC9C,MAAM,EACN,MAAM,CACT,CAAC;QACF,IAAI,MAAM;YAAE,MAAM,GAAG,MAAM,CAAC;QAC5B,WAAW,GAAG,MAAqB,CAAC;IACxC,CAAC;IAAC,MAAM,CAAC;QACL,OAAO,SAAS,CAAC;IACrB,CAAC;IAGD,KAAK,CAAC,QAAQ,CAAC,WAAW,CAAC,IAAI,CAAC,GAAG;QAC/B,EAAE,EAAE,EAAE,IAAI,EAAE,WAAW,CAAC,IAAI,EAAE,OAAO,EAAE,WAAW,CAAC,OAAO,EAAE;QAC5D,IAAI,EAAE,WAAW;QACjB,SAAS,EAAE,WAAW,CAAC,SAAS;QAChC,YAAY,EAAE,WAAW,CAAC,YAAY;QACtC,WAAW;KACd,CAAC;IAEF,MAAM,EAAE,KAAK,EAAE,SAAS,EAAE,GAAG,MAAM,aAAa,CAAC,WAAW,EAAE,WAAW,EAAE,KAAK,EAAE,IAAI,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;IAGzG,IAAI,KAAK,KAAK,CAAC;QAAE,OAAO,SAAS,CAAC;IAGlC,MAAM,eAAe,GAAG,KAAK,CAAC,OAAO,CAAC,WAAW,CAAC,YAAY,CAAC,IAAI,WAAW,CAAC,YAAY,CAAC,MAAM,GAAG,CAAC,CAAC;IACvG,MAAM,UAAU,GAAG,aAAa,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,wBAAwB,CAAC,WAAW,CAAC,YAAY,CAAC,CAAC;IACzG,MAAM,MAAM,GAAa,EAAE,CAAC;IAC5B,IAAI,CAAC,SAAS;QAAE,MAAM,CAAC,IAAI,CAAC,gBAAgB,CAAC,CAAC;IAC9C,IAAI,CAAC,eAAe;QAAE,MAAM,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC;IACrD,IAAI,CAAC,UAAU;QAAE,MAAM,CAAC,IAAI,CAAC,oBAAoB,CAAC,CAAC;IAEnD,IAAI,MAAM,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,SAAS,CAAC;IAC1C,OAAO,GAAG,WAAW,CAAC,IAAI,KAAK,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;AACvD,CAAC,CAAC"}

package/dist/scanner/processor.d.ts

@@ -1,4 +1,26 @@
 import type { ExtendedCache } from "../cache.js";
-import type { PackageJson } from "../types/index.js";
+import type { PackageJson, Patches, PatchReportSink } from "../types/index.js";
+export type CollectedEntry = {
+    filePath: string;
+    resourceType: string;
+    url: string;
+    version?: string;
+    kind?: string;
+    type?: string;
+    indexVersion: number;
+};
+export type IndexLoadResult = {
+    ok: true;
+    count: number;
+} | {
+    ok: false;
+    reason: "unparseable" | "missing-files";
+};
+export declare const collectFromIndex: (basePath: string) => Promise<{
+    result: IndexLoadResult;
+    entries: CollectedEntry[];
+}>;
+export declare const collectFromDirectory: (dirPath: string) => Promise<CollectedEntry[]>;
+export declare const commitEntries: (cache: ExtendedCache, packageJson: PackageJson, entries: CollectedEntry[], patches?: Patches, report?: PatchReportSink) => number;
 export declare const processIndex: (basePath: string, packageJson: PackageJson, cache: ExtendedCache) => Promise<void>;
 //# sourceMappingURL=processor.d.ts.map

package/dist/scanner/processor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"processor.d.ts","sourceRoot":"","sources":["../../src/scanner/processor.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAEjD,OAAO,KAAK,EAAc,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAGjE,eAAO,MAAM,YAAY,GAAU,UAAU,MAAM,EAAE,aAAa,WAAW,EAAE,OAAO,aAAa,KAAG,OAAO,CAAC,IAAI,CAkEjH,CAAC"}
+{"version":3,"file":"processor.d.ts","sourceRoot":"","sources":["../../src/scanner/processor.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAGjD,OAAO,KAAK,EAAc,WAAW,EAAE,OAAO,EAAE,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAI3F,MAAM,MAAM,cAAc,GAAG;IACzB,QAAQ,EAAE,MAAM,CAAC;IACjB,YAAY,EAAE,MAAM,CAAC;IACrB,GAAG,EAAE,MAAM,CAAC;IACZ,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,YAAY,EAAE,MAAM,CAAC;CACxB,CAAC;AAGF,MAAM,MAAM,eAAe,GAAG;IAAE,EAAE,EAAE,IAAI,CAAC;IAAC,KAAK,EAAE,MAAM,CAAA;CAAE,GAAG;IAAE,EAAE,EAAE,KAAK,CAAC;IAAC,MAAM,EAAE,aAAa,GAAG,eAAe,CAAA;CAAE,CAAC;AAOnH,eAAO,MAAM,gBAAgB,GACzB,UAAU,MAAM,KACjB,OAAO,CAAC;IAAE,MAAM,EAAE,eAAe,CAAC;IAAC,OAAO,EAAE,cAAc,EAAE,CAAA;CAAE,CAqChE,CAAC;AAOF,eAAO,MAAM,oBAAoB,GAAU,SAAS,MAAM,KAAG,OAAO,CAAC,cAAc,EAAE,CA+BpF,CAAC;AAQF,eAAO,MAAM,aAAa,GACtB,OAAO,aAAa,EACpB,aAAa,WAAW,EACxB,SAAS,cAAc,EAAE,EACzB,UAAU,OAAO,EACjB,SAAS,eAAe,KACzB,MA8CF,CAAC;AAMF,eAAO,MAAM,YAAY,GAAU,UAAU,MAAM,EAAE,aAAa,WAAW,EAAE,OAAO,aAAa,KAAG,OAAO,CAAC,IAAI,CAQjH,CAAC"}

package/dist/scanner/processor.js

@@ -1,62 +1,124 @@
 import * as fs from "node:fs/promises";
 import * as path from "node:path";
 import { fileExists } from "../fs/index.js";
+import { applyPatches } from "../patches.js";
 import { parseIndex } from "./parser.js";
-export const processIndex = async (basePath, packageJson, cache) => {
+export const collectFromIndex = async (basePath) => {
     const indexPath = path.join(basePath, ".index.json");
+    let indexContent;
     try {
-        const indexContent = await fs.readFile(indexPath, "utf-8");
-        const index = parseIndex(indexContent, indexPath);
-        if (!index)
-            return;
-        let missingCount = 0;
-        for (const file of index.files) {
-            if (!file.url)
+        indexContent = await fs.readFile(indexPath, "utf-8");
+    }
+    catch {
+        return { result: { ok: false, reason: "unparseable" }, entries: [] };
+    }
+    const index = parseIndex(indexContent, indexPath);
+    if (!index)
+        return { result: { ok: false, reason: "unparseable" }, entries: [] };
+    const entries = [];
+    let missingCount = 0;
+    for (const file of index.files) {
+        if (!file.url)
+            continue;
+        const filePath = path.join(basePath, file.filename);
+        if (!(await fileExists(filePath))) {
+            missingCount++;
+            continue;
+        }
+        entries.push({
+            filePath,
+            resourceType: file.resourceType,
+            url: file.url,
+            version: file.version,
+            kind: file.kind,
+            type: file.type,
+            indexVersion: index["index-version"],
+        });
+    }
+    if (missingCount > 0)
+        return { result: { ok: false, reason: "missing-files" }, entries };
+    return { result: { ok: true, count: entries.length }, entries };
+};
+export const collectFromDirectory = async (dirPath) => {
+    const entries = [];
+    try {
+        const dirents = await fs.readdir(dirPath, { withFileTypes: true });
+        for (const dirent of dirents) {
+            if (!dirent.isFile() || !dirent.name.endsWith(".json"))
                 continue;
-            const filePath = path.join(basePath, file.filename);
-            if (!(await fileExists(filePath))) {
-                missingCount++;
+            if (dirent.name === "package.json" || dirent.name === ".index.json")
                 continue;
+            const filePath = path.join(dirPath, dirent.name);
+            try {
+                const resource = JSON.parse(await fs.readFile(filePath, "utf-8"));
+                if (!resource.resourceType || !resource.url)
+                    continue;
+                entries.push({
+                    filePath,
+                    resourceType: resource.resourceType,
+                    url: resource.url,
+                    version: resource.version,
+                    kind: resource.kind,
+                    type: resource.type,
+                    indexVersion: 0,
+                });
             }
-            const id = cache.referenceManager.generateId({
-                packageName: packageJson.name,
-                packageVersion: packageJson.version,
-                filePath,
-            });
-            cache.referenceManager.set(id, {
-                packageName: packageJson.name,
-                packageVersion: packageJson.version,
-                filePath,
-                resourceType: file.resourceType,
-                url: file.url,
-                version: file.version,
-            });
-            const entry = {
-                id,
-                resourceType: file.resourceType,
-                indexVersion: index["index-version"],
-                url: file.url,
-                version: file.version,
-                kind: file.kind,
-                type: file.type,
-                package: {
-                    name: packageJson.name,
-                    version: packageJson.version,
-                },
-            };
-            if (!cache.entries[file.url]) {
-                cache.entries[file.url] = [];
-            }
-            const entries = cache.entries[file.url];
-            if (entries) {
-                entries.push(entry);
+            catch {
             }
         }
-        if (missingCount > 0) {
-            console.warn(`Warning: ${packageJson.name}@${packageJson.version} .index.json references ${missingCount} file(s) not found on disk — index may be corrupt`);
-        }
     }
     catch {
     }
+    return entries;
+};
+export const commitEntries = (cache, packageJson, entries, patches, report) => {
+    const pkg = { name: packageJson.name, version: packageJson.version };
+    let committed = 0;
+    for (const entry of entries) {
+        const id = cache.referenceManager.generateId({
+            packageName: packageJson.name,
+            packageVersion: packageJson.version,
+            filePath: entry.filePath,
+        });
+        let indexEntry = {
+            id,
+            resourceType: entry.resourceType,
+            indexVersion: entry.indexVersion,
+            url: entry.url,
+            version: entry.version,
+            kind: entry.kind,
+            type: entry.type,
+            package: pkg,
+        };
+        if (patches?.indexEntry.length && report) {
+            const result = applyPatches(patches.indexEntry, pkg, indexEntry, report);
+            if (result === null)
+                continue;
+            indexEntry = result;
+        }
+        const url = indexEntry.url;
+        if (!url)
+            continue;
+        cache.referenceManager.set(id, {
+            packageName: packageJson.name,
+            packageVersion: packageJson.version,
+            filePath: entry.filePath,
+            resourceType: indexEntry.resourceType,
+            url,
+            version: indexEntry.version,
+        });
+        if (!cache.entries[url])
+            cache.entries[url] = [];
+        cache.entries[url]?.push(indexEntry);
+        committed++;
+    }
+    return committed;
+};
+export const processIndex = async (basePath, packageJson, cache) => {
+    const { result, entries } = await collectFromIndex(basePath);
+    commitEntries(cache, packageJson, entries);
+    if (!result.ok && result.reason === "missing-files") {
+        console.warn(`Warning: ${packageJson.name}@${packageJson.version} .index.json references file(s) not found on disk — index may be corrupt`);
+    }
 };
 //# sourceMappingURL=processor.js.map

package/dist/scanner/processor.js.map

@@ -1 +1 @@
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+{"version":3,"file":"processor.js","sourceRoot":"","sources":["../../src/scanner/processor.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,MAAM,kBAAkB,CAAC;AACvC,OAAO,KAAK,IAAI,MAAM,WAAW,CAAC;AAElC,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC5C,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAE7C,OAAO,EAAE,UAAU,EAAE,MAAM,aAAa,CAAC;AAqBzC,MAAM,CAAC,MAAM,gBAAgB,GAAG,KAAK,EACjC,QAAgB,EAC+C,EAAE;IACjE,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,aAAa,CAAC,CAAC;IAErD,IAAI,YAAoB,CAAC;IACzB,IAAI,CAAC;QACD,YAAY,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;IACzD,CAAC;IAAC,MAAM,CAAC;QACL,OAAO,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,EAAE,OAAO,EAAE,EAAE,EAAE,CAAC;IACzE,CAAC;IAED,MAAM,KAAK,GAAG,UAAU,CAAC,YAAY,EAAE,SAAS,CAAC,CAAC;IAClD,IAAI,CAAC,KAAK;QAAE,OAAO,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,aAAa,EAAE,EAAE,OAAO,EAAE,EAAE,EAAE,CAAC;IAEjF,MAAM,OAAO,GAAqB,EAAE,CAAC;IACrC,IAAI,YAAY,GAAG,CAAC,CAAC;IACrB,KAAK,MAAM,IAAI,IAAI,KAAK,CAAC,KAAK,EAAE,CAAC;QAC7B,IAAI,CAAC,IAAI,CAAC,GAAG;YAAE,SAAS;QAExB,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,QAAQ,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC;QACpD,IAAI,CAAC,CAAC,MAAM,UAAU,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC;YAChC,YAAY,EAAE,CAAC;YACf,SAAS;QACb,CAAC;QAED,OAAO,CAAC,IAAI,CAAC;YACT,QAAQ;YACR,YAAY,EAAE,IAAI,CAAC,YAAY;YAC/B,GAAG,EAAE,IAAI,CAAC,GAAG;YACb,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,YAAY,EAAE,KAAK,CAAC,eAAe,CAAC;SACvC,CAAC,CAAC;IACP,CAAC;IAED,IAAI,YAAY,GAAG,CAAC;QAAE,OAAO,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,eAAe,EAAE,EAAE,OAAO,EAAE,CAAC;IACzF,OAAO,EAAE,MAAM,EAAE,EAAE,EAAE,EAAE,IAAI,EAAE,KAAK,EAAE,OAAO,CAAC,MAAM,EAAE,EAAE,OAAO,EAAE,CAAC;AACpE,CAAC,CAAC;AAOF,MAAM,CAAC,MAAM,oBAAoB,GAAG,KAAK,EAAE,OAAe,EAA6B,EAAE;IACrF,MAAM,OAAO,GAAqB,EAAE,CAAC;IAErC,IAAI,CAAC;QACD,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,OAAO,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;QACnE,KAAK,MAAM,MAAM,IAAI,OAAO,EAAE,CAAC;YAC3B,IAAI,CAAC,MAAM,CAAC,MAAM,EAAE,IAAI,CAAC,MAAM,CAAC,IAAI,CAAC,QAAQ,CAAC,OAAO,CAAC;gBAAE,SAAS;YACjE,IAAI,MAAM,CAAC,IAAI,KAAK,cAAc,IAAI,MAAM,CAAC,IAAI,KAAK,aAAa;gBAAE,SAAS;YAE9E,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,MAAM,CAAC,IAAI,CAAC,CAAC;YACjD,IAAI,CAAC;gBACD,MAAM,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC,CAAC;gBAClE,IAAI,CAAC,QAAQ,CAAC,YAAY,IAAI,CAAC,QAAQ,CAAC,GAAG;oBAAE,SAAS;gBACtD,OAAO,CAAC,IAAI,CAAC;oBACT,QAAQ;oBACR,YAAY,EAAE,QAAQ,CAAC,YAAY;oBACnC,GAAG,EAAE,QAAQ,CAAC,GAAG;oBACjB,OAAO,EAAE,QAAQ,CAAC,OAAO;oBACzB,IAAI,EAAE,QAAQ,CAAC,IAAI;oBACnB,IAAI,EAAE,QAAQ,CAAC,IAAI;oBACnB,YAAY,EAAE,CAAC;iBAClB,CAAC,CAAC;YACP,CAAC;YAAC,MAAM,CAAC;YAET,CAAC;QACL,CAAC;IACL,CAAC;IAAC,MAAM,CAAC;IAET,CAAC;IAED,OAAO,OAAO,CAAC;AACnB,CAAC,CAAC;AAQF,MAAM,CAAC,MAAM,aAAa,GAAG,CACzB,KAAoB,EACpB,WAAwB,EACxB,OAAyB,EACzB,OAAiB,EACjB,MAAwB,EAClB,EAAE;IACR,MAAM,GAAG,GAAG,EAAE,IAAI,EAAE,WAAW,CAAC,IAAI,EAAE,OAAO,EAAE,WAAW,CAAC,OAAO,EAAE,CAAC;IACrE,IAAI,SAAS,GAAG,CAAC,CAAC;IAClB,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;QAC1B,MAAM,EAAE,GAAG,KAAK,CAAC,gBAAgB,CAAC,UAAU,CAAC;YACzC,WAAW,EAAE,WAAW,CAAC,IAAI;YAC7B,cAAc,EAAE,WAAW,CAAC,OAAO;YACnC,QAAQ,EAAE,KAAK,CAAC,QAAQ;SAC3B,CAAC,CAAC;QAEH,IAAI,UAAU,GAAe;YACzB,EAAE;YACF,YAAY,EAAE,KAAK,CAAC,YAAY;YAChC,YAAY,EAAE,KAAK,CAAC,YAAY;YAChC,GAAG,EAAE,KAAK,CAAC,GAAG;YACd,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,IAAI,EAAE,KAAK,CAAC,IAAI;YAChB,IAAI,EAAE,KAAK,CAAC,IAAI;YAChB,OAAO,EAAE,GAAG;SACf,CAAC;QAEF,IAAI,OAAO,EAAE,UAAU,CAAC,MAAM,IAAI,MAAM,EAAE,CAAC;YACvC,MAAM,MAAM,GAAG,YAAY,CAAC,OAAO,CAAC,UAAU,EAAE,GAAG,EAAE,UAAU,EAAE,MAAM,CAAC,CAAC;YACzE,IAAI,MAAM,KAAK,IAAI;gBAAE,SAAS;YAC9B,UAAU,GAAG,MAAM,CAAC;QACxB,CAAC;QAID,MAAM,GAAG,GAAG,UAAU,CAAC,GAAG,CAAC;QAC3B,IAAI,CAAC,GAAG;YAAE,SAAS;QAEnB,KAAK,CAAC,gBAAgB,CAAC,GAAG,CAAC,EAAE,EAAE;YAC3B,WAAW,EAAE,WAAW,CAAC,IAAI;YAC7B,cAAc,EAAE,WAAW,CAAC,OAAO;YACnC,QAAQ,EAAE,KAAK,CAAC,QAAQ;YACxB,YAAY,EAAE,UAAU,CAAC,YAAY;YACrC,GAAG;YACH,OAAO,EAAE,UAAU,CAAC,OAAO;SAC9B,CAAC,CAAC;QAEH,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC;YAAE,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,GAAG,EAAE,CAAC;QACjD,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE,IAAI,CAAC,UAAU,CAAC,CAAC;QACrC,SAAS,EAAE,CAAC;IAChB,CAAC;IACD,OAAO,SAAS,CAAC;AACrB,CAAC,CAAC;AAMF,MAAM,CAAC,MAAM,YAAY,GAAG,KAAK,EAAE,QAAgB,EAAE,WAAwB,EAAE,KAAoB,EAAiB,EAAE;IAClH,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,gBAAgB,CAAC,QAAQ,CAAC,CAAC;IAC7D,aAAa,CAAC,KAAK,EAAE,WAAW,EAAE,OAAO,CAAC,CAAC;IAC3C,IAAI,CAAC,MAAM,CAAC,EAAE,IAAI,MAAM,CAAC,MAAM,KAAK,eAAe,EAAE,CAAC;QAClD,OAAO,CAAC,IAAI,CACR,YAAY,WAAW,CAAC,IAAI,IAAI,WAAW,CAAC,OAAO,0EAA0E,CAChI,CAAC;IACN,CAAC;AACL,CAAC,CAAC"}