@atomic-ehr/codegen 0.0.4 → 0.0.5-canary.20251226085624.be72273
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +21 -0
- package/README.md +210 -260
- package/assets/api/writer-generator/csharp/Client.cs +333 -0
- package/assets/api/writer-generator/csharp/Helper.cs +19 -0
- package/assets/api/writer-generator/python/requirements.txt +5 -0
- package/assets/api/writer-generator/python/resource_family_validator.py +92 -0
- package/dist/cli/index.js +13 -13
- package/dist/index.d.ts +120 -29
- package/dist/index.js +2062 -574
- package/dist/index.js.map +1 -1
- package/package.json +18 -12
package/dist/cli/index.js
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#!/usr/bin/env node
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import C from'picocolors';import Ci from'yargs';import {hideBin}from'yargs/helpers';import*as x from'fs';import x__default,{existsSync}from'fs';import*as N from'path';import N__default,{dirname,resolve}from'path';import*as U from'fs/promises';import {mkdir,writeFile,readFile}from'fs/promises';import {CanonicalManager}from'@atomic-ehr/fhir-canonical-manager';import {fileURLToPath}from'url';import se from'assert';import*as Mt from'yaml';import*as Ht from'@atomic-ehr/fhirschema';import {isStructureDefinition}from'@atomic-ehr/fhirschema';import {spawn}from'child_process';import*as Qt from'util';import ei from'mustache';var gt=i=>{switch(i.toUpperCase()){case "DEBUG":return 0;case "INFO":return 1;case "WARN":return 2;case "ERROR":return 3;case "SILENT":return 4;default:throw new Error(`Invalid log level: ${i}`)}},de=class i{options;dryWarnSet=new Set;constructor(e={}){this.options={timestamp:false,level:1,...e};}shouldLog(e){let t=this.options.level??1;return e>=t}static consoleLevelsMap={1:console.log,2:console.warn,3:console.error,0:console.log,4:()=>{}};formatMessage(e,t,r){let n=this.options.timestamp?`${C.gray(new Date().toLocaleTimeString())} `:"",o=this.options.prefix?`${C.cyan(`[${this.options.prefix}]`)} `:"";return `${n}${r(e)} ${o}${t}`}isSuppressed(e){return this.options.suppressLoggingLevel==="all"||this.options.suppressLoggingLevel?.includes(e)||false}tryWriteToConsole(e,t){if(this.isSuppressed(e)||!this.shouldLog(e))return;(i.consoleLevelsMap[e]||console.log)(t);}success(e){this.tryWriteToConsole(1,this.formatMessage("",e,C.green));}error(e,t){if(this.isSuppressed(3)||!this.shouldLog(3))return;console.error(this.formatMessage("X",e,C.red));let r=this.options.level===0;t&&r&&(console.error(C.red(` ${t.message}`)),t.stack&&console.error(C.gray(t.stack)));}warn(e){this.tryWriteToConsole(2,this.formatMessage("!",e,C.yellow));}dry_warn(e){this.dryWarnSet.has(e)||(this.warn(e),this.dryWarnSet.add(e));}info(e){this.tryWriteToConsole(1,this.formatMessage("i",e,C.blue));}debug(e){this.shouldLog(0)&&this.tryWriteToConsole(0,this.formatMessage("\u{1F41B}",e,C.magenta));}step(e){this.tryWriteToConsole(1,this.formatMessage("\u{1F680}",e,C.cyan));}progress(e){this.tryWriteToConsole(1,this.formatMessage("\u23F3",e,C.blue));}plain(e,t=r=>r){let r=this.options.timestamp?`${C.gray(new Date().toLocaleTimeString())} `:"",n=this.options.prefix?`${C.cyan(`[${this.options.prefix}]`)} `:"";this.tryWriteToConsole(1,`${r}${n}${t(e)}`);}dim(e){this.plain(e,C.gray);}child(e){return new i({...this.options,prefix:this.options.prefix?`${this.options.prefix}:${e}`:e})}configure(e){this.options={...this.options,...e};}getLevel(){return this.options.level??1}setLevel(e){this.options.level=e;}},G=new de;function Ge(i){G.success(i);}function w(i,e){G.error(i,e);}function ft(i){G.warn(i);}function He(i){G.info(i);}function ht(i){G.step(i);}function pr(i){G.dim(i);}function yt(i){G.configure(i);}function L(i={}){return new de(i)}function St(i){console.log(),console.log(C.cyan(C.bold(`\u2501\u2501\u2501 ${i} \u2501\u2501\u2501`)));}function Tt(i,e,t){let r=i;e&&(r+=` ${C.gray(`(${e}ms)`)}`),Ge(r),t&&Object.entries(t).forEach(([n,o])=>{pr(` ${n}: ${o}`);});}function J(i,e="\u2022"){i.forEach(t=>{console.log(C.gray(` ${e} ${t}`));});}var ue=i=>i.split(/(?<=[a-z])(?=[A-Z])|[-_.\s]/).filter(Boolean),me=i=>ue(i).map(e=>e.toLowerCase()).join("-"),bt=i=>{if(i.length===0)throw new Error("Empty string");return i[0]?.toUpperCase()+i.substring(1).toLowerCase()},K=i=>{if(i.length===0)throw new Error("Empty string");let[e,...t]=ue(i);return [e?.toLowerCase(),...t.map(bt)].join("")},k=i=>ue(i).map(bt).join(""),F=i=>ue(i).map(e=>e.toLowerCase()).join("_"),E=i=>!i||i.length===0?i:i.charAt(0).toUpperCase()+i.slice(1),Y=i=>i.map(e=>E(e));var vt=i=>`<${i.identifier.url}> from ${i.identifier.package}#${i.identifier.version}`;var Z=class{opts;currentDir;currentFile;writtenFilesBuffer={};constructor(e){this.opts=e;}setOutputDir(e){if(this.currentDir)throw new Error("Can't change output dir while writing");this.opts.outputDir=e;}logger(){return this.opts.logger}onDiskMkDir(e){this.opts.inMemoryOnly||x.existsSync(e)||x.mkdirSync(e,{recursive:true});}onDiskOpenFile(e){return this.opts.inMemoryOnly?-1:x.openSync(e,"w")}onDiskCloseFile(e){this.opts.inMemoryOnly||(x.fsyncSync(e),x.closeSync(e));}onDiskWrite(e,t){this.opts.inMemoryOnly||x.writeSync(e,t);}cd(e,t){let r=this.currentDir;this.currentDir=e.startsWith("/")?N.join(this.opts.outputDir,e):N.join(this.currentDir??this.opts.outputDir,e),this.onDiskMkDir(this.currentDir),this.logger()?.debug(`cd '${this.currentDir}'`),t(),this.currentDir=r;}cat(e,t){if(this.currentFile)throw new Error("Can't open file when another file is open");if(e.includes("/"))throw new Error(`Change file path separatly: ${e}`);let r=N.normalize(`${this.currentDir}/${e}`);try{let n=this.onDiskOpenFile(r);this.logger()?.debug(`cat > '${r}'`),this.currentFile={descriptor:n,relPath:r},this.writtenFilesBuffer[this.currentFile.relPath]={relPath:r,absPath:N.resolve(r),tokens:[]},t();}finally{this.currentFile&&this.onDiskCloseFile(this.currentFile.descriptor),this.currentFile=void 0;}}write(e){if(!this.currentFile)throw new Error("No file opened");this.onDiskWrite(this.currentFile.descriptor,e);let t=this.writtenFilesBuffer[this.currentFile.relPath];if(!t)throw new Error("No buffer found");t.tokens.push(e);}cp(e,t){if(!this.opts.resolveAssets)throw new Error("resolveAssets is not defined");e=N.resolve(this.opts.resolveAssets(e)),t=N.normalize(`${this.currentDir??this.opts.outputDir}/${t}`);let r=x.readFileSync(e,"utf8");this.writtenFilesBuffer[t]={relPath:t,absPath:N.resolve(t),tokens:[r]},x.cpSync(e,t);}writtenFiles(){return Object.values(this.writtenFilesBuffer).map(({relPath:e,absPath:t,tokens:r})=>({relPath:e,absPath:t,content:r.join("")})).sort((e,t)=>e.relPath.localeCompare(t.relPath))}},V=class extends Z{currentIndent=0;indent(){this.currentIndent+=this.opts.tabSize;}deindent(){this.currentIndent-=this.opts.tabSize;}writeIndent(){this.write(" ".repeat(this.currentIndent));}line(...e){e.length===0?this.write(`
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`):(this.writeIndent(),this.write(`${e.join(" ")}
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`));}lineSM(...e){this.writeIndent(),this.write(`${e.join(" ")};
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`);}comment(...e){let t=e.join(" ").split(`
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`);for(let n of t)this.line(this.opts.commentLinePrefix,n);}debugComment(...e){this.opts.withDebugComment&&(e=e.map(t=>typeof t=="string"?t:JSON.stringify(t,null,2)),this.comment(...e));}disclaimer(){return ["WARNING: This file is autogenerated by @atomic-ehr/codegen.","GitHub: https://github.com/atomic-ehr/codegen","Any manual changes made to this file may be overwritten."]}generateDisclaimer(){this.disclaimer().forEach(e=>{this.comment(e);}),this.line();}indentBlock(e){this.indent(),e(),this.deindent();}curlyBlock(e,t,n){this.line(`${e.filter(Boolean).join(" ")} {`),this.indent(),t(),this.deindent(),this.line(`}${n?.filter(Boolean).join(" ")??""}`);}squareBlock(e,t,n){this.line(`${e.filter(Boolean).join(" ")} [`),this.indent(),t(),this.deindent(),this.line(`]${n?.filter(Boolean).join(" ")??""}`);}};var ie=(r,e=true)=>{let t=r.split("/").pop();if(t&&(e&&t.includes("#")&&(t=t.split("#")[0]),!!t))return /^\d/.test(t)&&(t=`number_${t}`),t};var C=r=>`${r.name}#${r.version}`,Re=r=>`${r.name}@${r.version}`;var Ie=(r,e)=>(e||(e={name:"undefined",version:"undefined"}),{...r,package_meta:r.package_meta||e,name:r.name,url:r.url,base:r.base}),q=r=>r?.kind==="primitive-type",O=r=>r?.kind==="nested",et=r=>r?.kind==="complex-type",tt=r=>r?.kind==="profile";var j=r=>r?.identifier.kind==="resource"||r?.identifier.kind==="complex-type"||r?.identifier.kind==="logical",rt=r=>r?.identifier.kind==="complex-type",w=r=>r?.identifier.kind==="resource",nt=r=>r?.identifier.kind==="primitive-type",D=r=>r?.identifier.kind==="logical",oe=r=>r?.identifier.kind==="profile";function it(r){return r?.identifier.kind==="binding"}function ot(r){return r?.identifier.kind==="value-set"}var J=r=>r?r.choices===void 0:false,U=r=>r?r.choices!==void 0:false,st=(r,e)=>{if(!r.url)throw new Error("ValueSet must have a URL");if(!r.name)throw new Error("ValueSet must have a name");return {...r,package_meta:r.package_meta||e,name:r.name,url:r.url}};var 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n=zt(e),o=Wt(e);this.curlyBlock(["public","class",n,o],()=>{this.generateFields(e,t),this.generateNestedTypes(e,t),this.line(),this.includeHelperMethods();}),this.line();}generateFields(e,t){if(!e.fields)return;let n=Object.entries(e.fields).sort(([o],[i])=>o.localeCompare(i));for(let[o,i]of n)this.generateField(o,i,t);}generateNestedTypes(e,t){if(!(!("nested"in e)||!e.nested)){this.line();for(let n of e.nested)this.generateType(n,t);}}generateField(e,t,n){try{if(U(t))return;let o=this.buildFieldDeclaration(e,t,n);this.line(...o);}catch(o){this.logger()?.error(`Error processing field ${e}: ${o.message}`);}}buildFieldDeclaration(e,t,n){let o=this.determineFieldType(e,t,n),i=Gt(t),s=re(e);return ["public",...i,o,s,"{ get; set; }"].filter(Boolean)}determineFieldType(e,t,n){let o=this.getBaseTypeName(t);"enum"in t&&t.enum&&(o=this.registerAndGetEnumType(e,t,n)),o=ut(o);let i="",s=t.required?"":"?",c=t.array?"[]":"";return `${i}${o}${c}${s}`}getBaseTypeName(e){if("type"in e){let t=e.type.name.toString();return e.type.kind==="nested"?t=dt(e.type):e.type.kind==="primitive-type"&&(t=At[e.type.name]??"string"),t}return ""}registerAndGetEnumType(e,t,n){let i=`${$(t.binding?.name??e)}Enum`;return this.enums[n]||(this.enums[n]={}),t.enum&&(this.enums[n][i]=t.enum),i}includeHelperMethods(){this.line("public override string ToString() => "),this.line(" JsonSerializer.Serialize(this, Helper.JsonSerializerOptions);"),this.line();}generateUsingFile(e){this.cd("/",async()=>{this.cat("Usings.cs",()=>{this.generateDisclaimer(),this.generateGlobalUsings(e);});});}generateGlobalUsings(e){let t=["CSharpSDK","System.Text.Json","System.Text.Json.Serialization",this.opts.targetNamespace,...e.map(n=>`${this.opts.targetNamespace}.${n}`)];for(let n of t)this.lineSM("global","using",n);}generateBaseTypes(e){this.cd("/",async()=>{this.cat("base.cs",()=>{this.generateDisclaimer(),this.line(),this.lineSM("namespace",this.opts.targetNamespace);for(let t of e){let 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e="src/api/writer-generator/csharp/Helper.cs",t=P__default.join(this.opts.outputDir,"Helper.cs");T__default.copyFileSync(e,t);}};var Fe=r=>r!==null&&typeof r=="object"&&r.resourceType==="CodeSystem";var ae=r=>r!==null&&typeof r=="object"&&r.resourceType==="ValueSet";var Kt=async(r,e)=>{let n=(await r.packageJson(e.name)).dependencies;return n!==void 0?Object.entries(n).map(([o,i])=>({name:o,version:i})):[]},mt=r=>({pkg:r,canonicalResolution:{},fhirSchemas:{},valueSets:{}}),ht=async(r,e,t,n,o)=>{let i=C(e);if(o?.info(`${" ".repeat(t*2)}+ ${i}`),n[i])return n[i];let s=mt(e);for(let a of await r.search({package:e})){let l=a.url;if(!l||!(isStructureDefinition(a)||ae(a)||Fe(a)))continue;let d=l;s.canonicalResolution[d]&&o?.dry_warn(`Duplicate canonical URL: ${d} at ${i}.`),s.canonicalResolution[d]=[{deep:t,pkg:e,pkgId:i,resource:a}];}let c=await Kt(r,e);for(let a of c){let{canonicalResolution:l}=await ht(r,a,t+1,n,o);for(let[d,h]of Object.entries(l)){let m=d;s.canonicalResolution[m]=[...s.canonicalResolution[m]||[],...h];}}for(let a of Object.values(s.canonicalResolution))a.sort((l,d)=>l.deep-d.deep);return n[i]=s,s},ft=(r,e,t)=>{let n=Object.values(r).flatMap(o=>o.canonicalResolution[e]);if(!n)throw new Error(`No canonical resolution found for ${e} in any package`);return n[0]?.resource},K=async(r,{logger:e,fallbackPackageForNameResolution:t,focusedPackages:n})=>{let o=n??await r.packages(),i={};for(let p of o)await ht(r,p,0,i,e);for(let{pkg:p,canonicalResolution:g}of Object.values(i)){let y=C(p);if(!i[y])throw new Error(`Package ${y} not found`);let u=0;e?.info(`FHIR Schema conversion for '${C(p)}' begins...`);for(let[f,S]of Object.entries(g)){let v=S[0];if(!v)throw new Error("Resource not found");let b=v.resource,R=v.pkg;if(isStructureDefinition(b)){let V=Ie(gt.translate(b),R);u++,i[y].fhirSchemas[V.url]=V;}if(ae(b)){let V=st(b,R);i[y].valueSets[V.url]=V;}}e?.info(`FHIR Schema conversion for '${C(p)}' completed: ${u} 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n=$e(t),o=er(n),i={package_meta:{name:"missing_valuesets",version:Yt(n)||"0.0.0"},id:t},s=r.resolveVs(e,n)||i,c=s?.id&&!/^[a-zA-Z0-9_-]{20,}$/.test(s.id)?s.id:o;return {kind:"value-set",package:s.package_meta.name,version:s.package_meta.version,name:c,url:n}}function le(r,e,t){let n=e.join("."),[o,i,s]=t?[{name:"shared",version:"1.0.0"},t,`urn:fhir:binding:${t}`]:[r.package_meta,`${r.name}.${n}_binding`,`${r.url}#${n}_binding`];return {kind:"binding",package:o.name,version:o.version,name:i,url:s}}function pe(r,e,t,n){let o={};if(e.derivation==="constraint"){let a=r.resolveFsSpecializations(e.package_meta,e.url).map(l=>Pe(r,l,n)).filter(l=>l!==void 0).flat();for(let l of a.reverse())o[l.identifier.name]=l.identifier.url;}let i=t.join("."),s=o[i]??`${e.url}#${i}`;return {kind:"nested",package:e.package_meta.name,version:e.package_meta.version,name:i,url:s}}function yt(r,e,t){let n=[];for(let[o,i]of Object.entries(t)){let s=[...e,o];Q(i)&&n.push([s,i]),i.elements&&n.push(...yt(r,s,i.elements));}return n}function tr(r,e,t,n,o){let i={};for(let[s,c]of Object.entries(n)){let a=[...t,s],l=r.resolveElementSnapshot(e,a);Q(l)?i[s]=ue(r,e,a,l,o):i[s]=de(r,e,a,l,o);}return i}function Pe(r,e,t){if(!e.elements)return;let n=yt(e,[],e.elements).filter(([i,s])=>s.elements&&Object.keys(s.elements).length>0),o=[];for(let[i,s]of n){let c=pe(r,e,i,t),a;s.type==="BackboneElement"||!s.type?a="BackboneElement":a=s.type;let l=r.ensureSpecializationCanonicalUrl(a),d=r.resolveFs(e.package_meta,l);if(!d)throw new Error(`Could not resolve base type ${a}`);let h={kind:"complex-type",package:d.package_meta.name,version:d.package_meta.version,name:a,url:l},m=tr(r,e,i,s.elements??{},t),p={identifier:c,base:h,fields:m};o.push(p);}return o.sort((i,s)=>i.identifier.url.localeCompare(s.identifier.url)),o.length===0?void 0:o}function St(r){let e=[];for(let t of r){t.base&&e.push(t.base);for(let n of Object.values(t.fields||{}))"type"in n&&n.type&&e.push(n.type),"binding"in n&&n.binding&&e.push(n.binding);}return e}function bt(r,e,t){let n=t[t.length-1];if(!n)throw new Error(`Internal error: fieldName is missing for path ${t.join("/")}`);let o=t.slice(0,-1),i=r.resolveFsGenealogy(e.package_meta,e.url).flatMap(s=>{if(o.length===0)return s.required||[];if(!s.elements)return [];let c=s;for(let a of o)c=c?.elements?.[a];return c?.required||[]});return new Set(i).has(n)}function Ct(r,e,t){let n=t[t.length-1];if(!n)throw new Error(`Internal error: fieldName is missing for path ${t.join("/")}`);let o=t.slice(0,-1),i=r.resolveFsGenealogy(e.package_meta,e.url).flatMap(s=>{if(o.length===0)return s.excluded||[];if(!s.elements)return [];let c=s;for(let a of o)c=c?.elements?.[a];return c?.excluded||[]});return new Set(i).has(n)}var rr=(r,e,t)=>{if(t.refers)return t.refers.map(n=>{let o=r.ensureSpecializationCanonicalUrl(n),i=r.resolveFs(e.package_meta,o);if(!i)throw new Error(`Failed to resolve fs for ${o}`);return H(i)})};function Ee(r,e,t,n,o){if(n.elementReference){let i=n.elementReference.slice(1).filter((s,c)=>c%2===1);return pe(r,e,i,o)}else if(n.type){let i=r.ensureSpecializationCanonicalUrl(n.type),s=r.resolveFs(e.package_meta,i);if(!s)throw new Error(`Could not resolve field type: '${n.type}' (from '${e.url}' in '${C(e.package_meta)}')`);return H(s)}else {if(n.choices)return;if(e.derivation==="constraint")return;throw o?.error(`Can't recognize element type '${e.url}' (${e.derivation}) at '${t.join(".")}': ${JSON.stringify(n,void 0,2)}`),new Error("Unrecognized element type")}}var de=(r,e,t,n,o)=>{let i,s;n.binding&&(i=le(e,t,n.binding.bindingName),n.binding.strength==="required"&&n.type==="code"&&(s=Ne(r,e,n,o)));let c=Ee(r,e,t,n,o);return c||o?.warn(`Field type not found for '${e.url}#${t.join(".")}' 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i=r.resolveAny(o.system);if(i?.concept){let s=(c,a)=>{for(let l of c)n.push({system:a,code:l.code,display:l.display}),l.concept&&s(l.concept,a);};s(i.concept,o.system);}}catch{}}return n.length>0?n:void 0}var vt=100;function Ne(r,e,t,n){if(!t.binding)return;let o=t.binding.strength,i=t.binding.valueSet;if(!i||!(o==="required"||o==="extensible"&&(t.type==="code"||t.type==="Coding")||o==="preferred"&&(t.type==="code"||t.type==="Coding")))return;let c=Oe(r,e.package_meta,i);if(!c||c.length===0)return;let a=c.map(l=>l.code).filter(l=>l&&typeof l=="string"&&l.trim().length>0);if(a.length>vt){n?.dry_warn(`Value set ${i} has ${a.length} which is more than ${vt} codes, which may cause issues with code generation.`);return}return a.length>0?a:void 0}function or(r,e,t,n,o){if(!n.binding?.valueSet)return;let i=le(e,t,n.binding.bindingName),s=Ee(r,e,t,n,o),c=ce(r,e.package_meta,n.binding.valueSet),a=[];s&&a.push(s),a.push(c);let l=Ne(r,e,n,o);return {identifier:i,type:s,valueset:c,strength:n.binding.strength,enum:l,dependencies:a}}function xt(r,e,t){let n=new Set;if(!e.elements)return [];let o=[];function i(a,l){for(let[d,h]of Object.entries(a)){let m=[...l,d],p=m.join(".");if(!n.has(p)){if(n.add(p),h.binding){let g=or(r,e,m,h,t);g&&o.push(g);}h.elements&&i(h.elements,m);}}}i(e.elements,[]),o.sort((a,l)=>a.identifier.name.localeCompare(l.identifier.name));let s=[],c=new Set;for(let a of o)c.has(a.identifier.url)||(c.add(a.identifier.url),s.push(a));return s}function sr(r,e,t,n,o){if(!n)return;let i={};for(let s of r.getAllElementKeys(n)){let c=[...t,s],a=r.resolveElementSnapshot(e,c);Q(a)?i[s]=ue(r,e,c,a,o):i[s]=de(r,e,c,a,o);}return i}function ar(r){let e=[];for(let t of Object.values(r))"type"in t&&t.type&&e.push(t.type),"binding"in t&&t.binding&&e.push(t.binding);return e}function cr(r,e){return 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${C(e.package_meta)}`);o=H(d);}let i=sr(r,e,[],e.elements,t),s=Pe(r,e,t),c=De(n,o,i,s),a={identifier:n,base:o,fields:i,nested:s,description:e.description,dependencies:c},l=xt(r,e,t);return [a,...l]}async function ge(r,e,t){let n=lr(r,e,t);if(cr(e,H(e))){let o=n[0];if(!o)throw new Error("Expected schema to be defined");o.metadata={isExtension:true};}return n}var Me=r=>{let e={};for(let t of r){let n=t.identifier.package;e[n]||(e[n]=[]),e[n].push(t);}for(let[t,n]of Object.entries(e)){let o={};for(let s of n)o[JSON.stringify(s.identifier)]=s;let i=Object.values(o);i.sort((s,c)=>s.identifier.name.localeCompare(c.identifier.name)),e[t]=i;}return e},pr=(r,e,t)=>{if(r=structuredClone(r),nt(r)||ot(r)||it(r))return r;for(let n of e.ignoreFields??[]){if(r.fields&&!r.fields[n])throw new Error(`Field ${n} not found`);r.fields&&delete r.fields[n];}return r.dependencies=De(r.identifier,r.base,r.fields,r.nested),r},Rt=(r,e,{resolutionTree:t,logger:n})=>{let o=[];for(let[c,a]of Object.entries(e))for(let[l,d]of Object.entries(a)){let h=r.resolveByUrl(c,l);if(!h)throw new Error(`Schema not found for ${c} ${l}`);let m=pr(h,d);o.push(m);}let i=(c,a)=>{if(c.length===0)return Object.values(a);for(let d of c)a[JSON.stringify(d.identifier)]=d;let l=[];for(let d of c)if(j(d)){if(!d.dependencies)continue;if(d.dependencies.forEach(h=>{let m=r.resolve(h);if(!m)throw new Error(`Schema not found for ${h}`);let p=JSON.stringify(m.identifier);a[p]||l.push(m);}),d.nested)for(let h of d.nested){if(O(h.identifier))continue;let m=JSON.stringify(h.identifier);a[m]||l.push(h);}}return i(l,a)},s=i(o,{});return Ve(s,{resolutionTree:t,logger:n})},dr=r=>{let e=r.filter(i=>w(i)||D(i)),t=[];for(let i of e)i.base&&t.push({parent:i.base,child:i.identifier});let n=[...t],o=i=>{let s=t.filter(a=>a.parent.name===i.name).map(a=>a.child),c=[];for(let a of s)c.push(...o(a));return [...s,...c]};for(let i of t){let s=o(i.child);for(let c of s)t.some(a=>a.parent.name===i.parent.name&&a.child.name===c.name)||n.push({parent:i.parent,child:c});}return n},Ve=(r,{resolutionTree:e,logger:t})=>{let n={},o=u=>{let f=u.identifier.url,S=u.identifier.package;if(n[f]||(n[f]={}),n[f][u.identifier.package]&&S!=="shared"){let v=JSON.stringify(u.identifier,void 0,2),b=JSON.stringify(n[f][S]?.identifier,void 0,2);if(v!==b)throw new Error(`Duplicate schema: ${v} and ${b}`);return}n[f][S]=u;};for(let u of r)o(u);let i=dr(r),s=u=>n[u.url]?.[u.package],c=(u,f)=>{if(e){let S=e[u]?.[f]?.[0];if(S)return n[f]?.[S.pkg.name]}return n[f]?.[u]},a=u=>i.filter(f=>f.parent.name===u.name).map(f=>f.child),l=u=>{let f=[],S=u;for(;S;){f.push(S);let v=S.base;if(v===void 0)break;let b=s(v);if(!b){t?.warn(`Failed to resolve base type: ${f.map(R=>`${R.identifier.url} (${R.identifier.kind})`).join(", ")}`);return}S=b;}return f},d=u=>{let f=l(u);if(f===void 0)throw new Error(`Failed to resolve base type: ${u.identifier.url} (${u.identifier.kind})`);return f},h=u=>{let f=d(u).find(S=>S.identifier.kind!=="profile");if(!f)throw new Error(`No non-constraint schema found in hierarchy for: ${u.identifier.name}`);return f};return {_schemaIndex:n,_relations:i,collectComplexTypes:()=>r.filter(rt),collectResources:()=>r.filter(w),collectLogicalModels:()=>r.filter(D),collectProfiles:()=>r.filter(oe),resolve:s,resolveByUrl:c,resourceChildren:a,tryHierarchy:l,hierarchy:d,findLastSpecialization:h,findLastSpecializationByIdentifier:u=>{let f=s(u);return f?h(f).identifier:u},flatProfile:u=>{let f=d(u),S=f.filter(E=>E.identifier.kind==="profile"),v=f.find(E=>E.identifier.kind!=="profile");if(!v)throw new Error(`No non-constraint schema found in hierarchy for ${u.identifier.name}`);let b={};for(let E of S.slice().reverse()){let ee=E;if(ee.fields)for(let[te,Ge]of Object.entries(ee.fields))b[te]?b[te]={...b[te],...Ge}:b[te]={...Ge};}let R={};for(let E of S.flatMap(ee=>ee.dependencies??[]))R[E.url]=E;let V=Object.values(R);return {...u,base:v.identifier,fields:b,dependencies:V}},isWithMetaField:u=>{let f=l(u);return f?f.filter(j).some(S=>S.fields?.meta!==void 0):false},exportTree:async u=>{let f={};for(let[v,b]of Object.entries(Me(r))){f[v]={"primitive-type":{},"complex-type":{},resource:{},"value-set":{},nested:{},binding:{},profile:{},logical:{}};for(let R of b)f[v][R.identifier.kind][R.identifier.url]={};}let S=u.endsWith(".yaml")?Tt.stringify(f):JSON.stringify(f,void 0,2);await M.mkdir(P.dirname(u),{recursive:true}),await M.writeFile(u,S);}}};var X=class{manager;options;logger;constructor(e={}){this.options={verbose:false,...e},this.manager=e.manager||CanonicalManager({packages:[],workingDir:"tmp/fhir"}),this.logger=e.logger||N({verbose:this.options.verbose,prefix:"TypeSchema"});}async registerFromPackageMetas(e){let t=e.map(C);return this.logger?.step(`Loading FHIR packages: ${t.join(", ")}`),await this.manager.init(),K(this.manager,{focusedPackages:e})}generateFhirSchemas(e){this.logger?.progress(`Converting ${e.length} StructureDefinitions to FHIRSchemas`);let t=[],n=0,o=0;for(let i of e)try{let s=gt.translate(i);t.push(s),n++,this.logger?.debug(`Converted StructureDefinition: ${i.name||i.id} (${i.resourceType})`);}catch(s){o++,this.logger?.warn(`Failed to convert StructureDefinition ${i.name||i.id}: ${s instanceof Error?s.message:String(s)}`);}return this.logger?.success(`FHIR Schema conversion completed: ${n}/${e.length} successful, ${o} failed`),t}async generateValueSetSchemas(e,t){e.length>0&&this.logger?.debug(`${e.length} ValueSets available for enum extraction`);let n=await K(this.manager,{logger:this.logger}),o=[];if(e.length>0){this.logger?.progress(`Converting ${e.length} ValueSets to TypeSchema`);let i=0,s=0;for(let c of e)try{let a=await fe(n,c,t);a&&(o.push(a),i++,this.logger?.debug(`Converted ValueSet: ${c.name||c.id}`));}catch(a){s++,this.logger?.warn(`Failed to 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R4.",Ft={"hl7.fhir.uv.extensions.r4#1.0.0":{"http://hl7.org/fhir/StructureDefinition/extended-contact-availability":fr,"http://hl7.org/fhir/StructureDefinition/immunization-procedure":Y,"http://hl7.org/fhir/StructureDefinition/specimen-additive":Y,"http://hl7.org/fhir/StructureDefinition/workflow-barrier":Y,"http://hl7.org/fhir/StructureDefinition/workflow-protectiveFactor":Y,"http://hl7.org/fhir/StructureDefinition/workflow-reason":Y},"hl7.fhir.r5.core#5.0.0":{"http://hl7.org/fhir/StructureDefinition/shareablecodesystem":"FIXME: CodeSystem.concept.concept defined by ElementReference. 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Set(["class","function","return","if","for","while","const","let","var","import","export","interface"]),W=r=>Nt.has(r)?`"${r}"`:r.includes(" ")||r.includes("-")?`"${r}"`:r,Le=r=>(Nt.has(r)&&(r=`${r}_`),r.replace(/[- ]/g,"_")),A=(r,e)=>e.startsWith('"')?`${r}[${e}]`:`${r}.${e}`,Pt=r=>`(${r.map(e=>`"${e}"`).join(" | ")})`,ye=class extends z{tsImportType(e,...t){this.lineSM(`import type { ${t.join(", ")} } from "${e}"`);}generateFhirPackageIndexFile(e){this.cat("index.ts",()=>{let t=e.flatMap(n=>[{identifier:n.identifier,tsPackageName:je(n.identifier),resourceName:k(n.identifier),nestedTypes:w(n)&&n.nested||D(n)&&n.nested?n.nested.map(o=>k(o.identifier)):[],helpers:w(n)||D(n)?[`is${k(n.identifier)}`]:[]}]).sort((n,o)=>n.resourceName.localeCompare(o.resourceName));t=Array.from(new Map(t.map(n=>[n.resourceName.toLowerCase(),n])).values()).sort((n,o)=>n.resourceName.localeCompare(o.resourceName));for(let n of t)this.debugComment(n.identifier),this.lineSM(`export type { ${[n.resourceName,...n.nestedTypes].join(", ")} } from "./${n.tsPackageName}"`),n.helpers.length>0&&this.lineSM(`export { ${n.helpers.join(", ")} } from "./${n.tsPackageName}"`);});}generateDependenciesImports(e,t){if(t.dependencies){let n=[],o=[];for(let i of t.dependencies)if(["complex-type","resource","logical"].includes(i.kind))n.push({tsPackage:`../${he(i)}`,name:F(i.name),dep:i});else if(O(i)){let s={...i};s.name=Be(i.url),n.push({tsPackage:`../${he(s)}`,name:k(i),dep:i});}else o.push(i);n.sort((i,s)=>i.name.localeCompare(s.name));for(let i of n)this.debugComment(i.dep),this.tsImportType(i.tsPackage,i.name);for(let i of o)this.debugComment("skip:",i);if(this.line(),this.withPrimitiveTypeExtension(t)&&t.identifier.name!=="Element"&&t.dependencies.find(i=>i.name==="Element")===void 0){let i="http://hl7.org/fhir/StructureDefinition/Element",s=e.resolveByUrl(t.identifier.package,i);if(!s)throw new Error(`'${i}' not found for ${t.identifier.package}.`);this.tsImportType(`../${he(s.identifier)}`,"Element");}}}generateComplexTypeReexports(e){let t=e.dependencies?.filter(et).map(n=>({tsPackage:`../${he(n)}`,name:F(n.name)}));if(t&&t.length>0){for(let n of t)this.lineSM(`export type { ${n.name} } from "${n.tsPackage}"`);this.line();}}addFieldExtension(e){let t=W(`_${e}`);this.lineSM(`${t}?: Element`);}generateType(e,t){let n;t.identifier.name==="Reference"?n="Reference<T extends string = string>":(t.identifier.kind,n=k(t.identifier));let o;if(t.base&&(o=`extends ${Be(t.base.url)}`),this.debugComment(t.identifier),!t.fields&&!o&&!w(t)){this.lineSM(`export type ${n} = object`);return}this.curlyBlock(["export","interface",n,o],()=>{if(w(t)||D(t)){let s=[t.identifier];s.push(...e.resourceChildren(t.identifier));let c=this.opts.openResourceTypeSet&&s.length>1?" | string":"";this.lineSM(`resourceType: ${s.sort((a,l)=>a.name.localeCompare(l.name)).map(a=>`"${a.name}"`).join(" | ")}${c}`),this.line();}if(!t.fields)return;let i=Object.entries(t.fields).sort((s,c)=>s[0].localeCompare(c[0]));for(let[s,c]of i){if(U(c))continue;this.debugComment(s,":",c);let a=W(s),l;c.enum?l=Pt(c.enum):t.identifier.name==="Reference"&&a==="reference"?l="`${T}/${string}`":c.reference&&c.reference.length>0?l=`Reference<${c.reference.map(p=>`"${p.name}"`).join(" | ")}>`:q(c.type)?l=$t(c.type.name):O(c.type)?l=k(c.type):l=c.type.name;let d=c.required?"":"?",h=c.array?"[]":"";this.lineSM(`${a}${d}: ${l}${h}`),this.withPrimitiveTypeExtension(t)&&q(c.type)&&this.addFieldExtension(s);}});}withPrimitiveTypeExtension(e){if(!this.opts.primitiveTypeExtension||!j(e))return false;for(let t of Object.values(e.fields??{}))if(!U(t)&&q(t.type))return true;return false}generateResourceTypePredicate(e){if(!w(e)&&!D(e))return;let t=k(e.identifier);this.curlyBlock(["export","const",`is${t}`,"=",`(resource: unknown): resource is ${t}`,"=>"],()=>{this.lineSM(`return resource !== null && typeof resource === "object" && (resource as {resourceType: string}).resourceType === "${e.identifier.name}"`);});}generateNestedTypes(e,t){if(t.nested)for(let n of t.nested)this.generateType(e,n),this.line();}generateProfileType(e,t){this.debugComment("flatProfile",t);let n=k(t.identifier);this.debugComment("identifier",t.identifier),this.debugComment("base",t.base),this.curlyBlock(["export","interface",n],()=>{this.lineSM(`__profileUrl: "${t.identifier.url}"`),this.line();for(let[o,i]of Object.entries(t.fields??{})){if(U(i))continue;this.debugComment(o,i);let s=W(o),c;if(i.enum)c=Pt(i.enum);else if(i.reference&&i.reference.length>0){let a=e.findLastSpecialization(t);if(!j(a))throw new Error(`Invalid specialization for ${t.identifier}`);let l=a.fields?.[o];if(l===void 0||U(l)||l.reference===void 0)throw new Error(`Invalid field declaration for ${o}`);let d=l.reference.map(m=>m.name),h=i.reference.map(m=>{let p=e.findLastSpecializationByIdentifier(m);return p.name!==m.name?`"${p.name}" /*${m.name}*/`:`'${m.name}'`}).join(" | ");d.length===1&&d[0]==="Resource"&&h!=='"Resource"'?c=`Reference<"Resource" /* ${h} */ >`:c=`Reference<${h}>`;}else if(O(i.type))c=k(i.type);else if(q(i.type))c=$t(i.type.name);else {if(i.type===void 0)throw new Error(`Undefined type for '${o}' field at ${Ze(t)}`);c=i.type.name;}this.lineSM(`${s}${i.required?"":"?"}: ${c}${i.array?"[]":""}`);}}),this.line();}generateAttachProfile(e){let t=k(e.base),n=k(e.identifier),o=Object.entries(e.fields||{}).filter(([i,s])=>s&&J(s)&&s.type!==void 0).map(([i])=>W(i));this.curlyBlock([`export const attach_${n}_to_${t} =`,`(resource: ${t}, profile: ${n}): ${t}`,"=>"],()=>{this.curlyBlock(["return"],()=>{this.line("...resource,"),this.curlyBlock(["meta:"],()=>{this.line(`profile: ['${e.identifier.url}']`);},[","]),o.forEach(i=>{this.line(`${i}: ${A("profile",i)},`);});});}),this.line();}generateExtractProfile(e,t){let n=k(t.base),o=k(t.identifier),i=Object.entries(t.fields||{}).filter(([a,l])=>J(l)&&l.type!==void 0).map(([a])=>a),s=e.findLastSpecialization(t);if(!j(s))throw new Error(`Specialization not found for ${t.identifier.url}`);let c={};this.curlyBlock([`export const extract_${o}_from_${n} =`,`(resource: ${n}): ${o}`,"=>"],()=>{i.forEach(a=>{let l=W(a),d=t.fields?.[a],h=s.fields?.[a];if(!J(d)||!J(h))return;d.required&&!h.required&&this.curlyBlock([`if (${A("resource",l)} === undefined)`],()=>this.lineSM(`throw new Error("'${l}' is required for ${t.identifier.url}")`));let m=d?.reference?.map(g=>g.name),p=h?.reference?.map(g=>g.name);if(m&&p&&m.length!==p.length){let g=`reference_is_valid_${l}`;this.curlyBlock(["const",g,"=","(ref?: Reference)","=>"],()=>{this.line("return !ref"),this.indentBlock(()=>{p.forEach(u=>{this.line(`|| ref.reference?.startsWith('${u}/')`);}),this.line(";");});});let y=d?.required?"":`!${A("resource",l)} || `;d.array?y+=`${A("resource",l)}.every( (ref) => ${g}(ref) )`:y+=`!${g}(${A("resource",l)})`,this.curlyBlock(["if (",y,")"],()=>{this.lineSM(`throw new Error("'${a}' has different references in profile and specialization")`);}),this.line(),c[a]=true;}}),this.curlyBlock(["return"],()=>{this.line(`__profileUrl: '${t.identifier.url}',`),i.forEach(a=>{let l=W(a);c[a]?this.line(`${l}:`,`${A("resource",l)} as ${o}['${l}'],`):this.line(`${l}:`,`${A("resource",l)},`);});});});}generateResourceModule(e,t){this.cat(`${mr(t.identifier)}`,()=>{if(this.generateDisclaimer(),["complex-type","resource","logical"].includes(t.identifier.kind))this.generateDependenciesImports(e,t),this.generateComplexTypeReexports(t),this.generateNestedTypes(e,t),this.comment("CanonicalURL:",t.identifier.url),this.generateType(e,t),this.generateResourceTypePredicate(t);else if(oe(t)){let n=e.flatProfile(t);this.generateDependenciesImports(e,n),this.comment("CanonicalURL:",t.identifier.url),this.generateProfileType(e,n),this.generateAttachProfile(n),this.generateExtractProfile(e,n);}else throw new Error(`Profile generation not implemented for kind: ${t.identifier.kind}`)});}async generate(e){let t=[...e.collectComplexTypes(),...e.collectResources(),...e.collectLogicalModels(),...this.opts.generateProfile?e.collectProfiles().filter(o=>e.isWithMetaField(o)):[]],n=Me(t);this.cd("/",()=>{for(let[o,i]of Object.entries(n)){let s=Et(o);this.cd(s,()=>{for(let c of i)this.generateResourceModule(e,c);this.generateFhirPackageIndexFile(i);});}});}};var Ot=r=>{let e=r.replace(/[^a-zA-Z0-9\-_.@#()]/g,"");return e.length===0?"unknown":e},yr=async(r,e)=>{e.info("Cleaning outputs...");try{e.info(`Clean ${r.outputDir}`),T.rmSync(r.outputDir,{recursive:!0,force:!0}),r.typeSchemaOutputDir&&(e.info(`Clean ${r.typeSchemaOutputDir}`),T.rmSync(r.typeSchemaOutputDir,{recursive:!0,force:!0})),r.exportTypeTree&&(e.info(`Clean ${r.exportTypeTree}`),T.rmSync(r.exportTypeTree,{recursive:!0,force:!0}));}catch(t){e.warn(`Error cleaning output directory: ${t instanceof Error?t.message:String(t)}`);}},Sr=async(r,e,t)=>{await M.mkdir(e,{recursive:true}),t.info(`Writing TypeSchema files to ${e}/...`);let n={};for(let o of r){let i={name:o.identifier.package,version:o.identifier.version},s=Ot(C(i)),c=Ot(`${o.identifier.name}(${ie(o.identifier.url)})`),a=JSON.stringify(o,null,2),l=P.join(e,s,c);n[l]||(n[l]=[]),n[l]?.some(d=>d===a)||n[l].push(a);}for(let[o,i]of Object.entries(n))await Promise.all(i.map(async(s,c)=>{let a;c===0?a=`${o}.typeschema.json`:a=`${o}-${c}.typeschema.json`,await M.mkdir(P.dirname(a),{recursive:true}),await M.writeFile(a,s);}));},br=async(r,e,t)=>{t.info(`Writing TypeSchema files to: ${e}`),await M.mkdir(P.dirname(e),{recursive:true}),t.info(`Writing TypeSchemas to one file ${e}...`);for(let n of r){let o=JSON.stringify(n,null,2);await M.appendFile(e,`${o}
|
|
7
|
-
`);}},Cr=async(r,e,t)=>{if(e.typeSchemaOutputDir)try{P.extname(e.typeSchemaOutputDir)===".ndjson"?await br(r,e.typeSchemaOutputDir,t):await Sr(r,e.typeSchemaOutputDir,t),t.info("Writing TypeSchema - DONE");}catch(n){if(t.error("Failed to write TypeSchema output",n instanceof Error?n:new Error(String(n))),e.throwException)throw n}},Z=class{schemas=[];options;generators=new Map;logger;packages=[];progressCallback;typeSchemaConfig;constructor(e={}){this.options={outputDir:e.outputDir||"./generated",verbose:e.verbose??false,overwrite:e.overwrite??true,cache:e.cache??true,cleanOutput:e.cleanOutput??true,typeSchemaConfig:e.typeSchemaConfig,manager:e.manager||null,throwException:e.throwException||false,typeSchemaOutputDir:e.typeSchemaOutputDir,exportTypeTree:e.exportTypeTree,treeShake:e.treeShake},this.typeSchemaConfig=e.typeSchemaConfig,this.logger=e.logger||N({verbose:this.options.verbose,prefix:"API"});}fromPackage(e,t){let n=Re({name:e,version:t||"latest"});return this.packages.push(n),this}fromPackageRef(e){return this.packages.push(e),this}fromSchemas(e){return this.logger.debug(`Adding ${e.length} TypeSchemas to generation`),this.schemas=[...this.schemas,...e],this}typescript(e){let o={...{...{logger:this.logger,outputDir:P.join(this.options.outputDir,"/types"),tabSize:4,withDebugComment:false,commentLinePrefix:"//",generateProfile:true},openResourceTypeSet:false,primitiveTypeExtension:true},...Object.fromEntries(Object.entries(e).filter(([s,c])=>c!==void 0))},i=new ye(o);return this.generators.set("typescript",i),this.logger.debug(`Configured TypeScript generator (${JSON.stringify(o,void 0,2)})`),this}csharp(e,t){let n=new se({outputDir:P.join(this.options.outputDir,"/types"),staticSourceDir:t??void 0,targetNamespace:e,logger:new _({prefix:"C#",timestamp:true,verbose:true,suppressLoggingLevel:[]})});return this.generators.set("C#",n),this.logger.debug("Configured C# generator"),this}onProgress(e){return this.progressCallback=e,this}outputTo(e){this.logger.debug(`Setting output directory: ${e}`),this.options.outputDir=e;for(let t of this.generators.values())t.setOutputDir(e);return this}verbose(e=true){return this.options.verbose=e,this.logger?.configure({verbose:e}),this}throwException(e=true){return this.options.throwException=e,this}cleanOutput(e=true){return this.options.cleanOutput=e,this}writeTypeTree(e){return this.options.exportTypeTree=e,this}treeShake(e){return this.options.treeShake=e,this}writeTypeSchemas(e){return this.options.typeSchemaOutputDir=e,this}async generate(){let e=performance.now(),t={success:false,outputDir:this.options.outputDir,filesGenerated:[],errors:[],warnings:[],duration:0};this.logger.debug(`Starting generation with ${this.generators.size} generators`);try{this.options.cleanOutput&&yr(this.options,this.logger),this.logger.info("Initialize Canonical Manager");let n=CanonicalManager({packages:this.packages,workingDir:".codegen-cache/canonical-manager-cache"}),o=await n.init(),i=Object.values(o),s=await K(n,{logger:this.logger,focusedPackages:i}),c=await wt(s,this.logger);await Cr(c,this.options,this.logger);let a={resolutionTree:s.resolutionTree(),logger:this.logger},l=Ve(c,a);this.options.treeShake&&(l=Rt(l,this.options.treeShake,a)),this.options.exportTypeTree&&await l.exportTree(this.options.exportTypeTree),this.logger.debug(`Executing ${this.generators.size} generators`),await this.executeGenerators(t,l),this.logger.info("Generation completed successfully"),t.success=t.errors.length===0,this.logger.debug(`Generation completed: ${t.filesGenerated.length} files`);}catch(n){if(this.logger.error("Code generation failed",n instanceof Error?n:new Error(String(n))),t.errors.push(n instanceof Error?n.message:String(n)),this.options.throwException)throw n}return {...t,success:t.errors.length===0,duration:performance.now()-e}}reset(){return this.schemas=[],this.generators.clear(),this.progressCallback=void 0,this}getSchemas(){return [...this.schemas]}getGenerators(){return Array.from(this.generators.keys())}async executeGenerators(e,t){for(let[n,o]of this.generators.entries()){this.logger.info(`Generating ${n}...`);try{await o.generate(t);let i=o.writtenFiles();e.filesGenerated.push(...i.map(s=>s.absPath)),this.logger.info(`Generating ${n} finished successfully`);}catch(i){if(e.errors.push(`${n} generator failed: ${i instanceof Error?i.message:String(i)}`),this.options.throwException)throw i}}}};var Ue={outputDir:"./generated",verbose:false,overwrite:true,validate:true,cache:true,cleanOutput:true,typescript:{moduleFormat:"esm",generateIndex:true,includeDocuments:false,namingConvention:"PascalCase",strictMode:true,includeProfiles:true,includeExtensions:false,includeCodeSystems:false,includeOperations:false,generateValueSets:false,valueSetDirectory:"valuesets",valueSetMode:"required-only",valueSetStrengths:["required"],includeValueSetHelpers:false,fhirVersion:"R4",resourceTypes:[],maxDepth:10,profileOptions:{generateKind:"interface",includeConstraints:true,includeDocumentation:true,strictMode:false,subfolder:"profiles"},generateBuilders:false,builderOptions:{includeValidation:true,includeFactoryMethods:true,includeInterfaces:true,generateNestedBuilders:true,includeHelperMethods:true,supportPartialBuild:true,includeJSDoc:true,generateFactories:true,includeTypeGuards:true,handleChoiceTypes:true,generateArrayHelpers:true},validatorOptions:{includeCardinality:true,includeTypes:true,includeConstraints:true,includeInvariants:false,validateRequired:true,allowAdditional:false,strictValidation:false,collectMetrics:false,generateAssertions:true,generatePartialValidators:true,optimizePerformance:true,includeJSDoc:true,generateCompositeValidators:true},guardOptions:{includeRuntimeValidation:true,includeErrorMessages:true,treeShakeable:true,targetTSVersion:"5.0",strictGuards:false,includeNullChecks:true,verbose:false}},typeSchema:{enablePersistence:true,cacheDir:".typeschema-cache",maxAge:1440*60*1e3,validateCached:true,forceRegenerate:false,shareCache:true,cacheKeyPrefix:"",treeshake:[],singleFile:false,profiles:{autoDetect:true}},packages:[],files:[],$schema:""},be=["atomic-codegen.config.ts","atomic-codegen.config","atomic-codegen.config.json",".atomic-codegenrc","atomic-codegen.json",".atomic-codegen.json","codegen.config.json","codegen.json"],He=class{validate(e){let t={valid:true,errors:[],warnings:[]};if(!e||typeof e!="object")return t.valid=false,t.errors.push({path:"root",message:"Configuration must be an object",value:e}),t;let n=e;n.outputDir!==void 0&&typeof n.outputDir!="string"&&t.errors.push({path:"outputDir",message:"outputDir must be a string",value:n.outputDir});let o=["verbose","overwrite","validate","cache"];for(let i of o)n[i]!==void 0&&typeof n[i]!="boolean"&&t.errors.push({path:i,message:`${i} must be a boolean`,value:n[i]});if(n.typescript!==void 0){let i=this.validateTypeScriptConfig(n.typescript);t.errors.push(...i);}if(n.typeSchema!==void 0){let i=this.validateTypeSchemaConfig(n.typeSchema);t.errors.push(...i);}return n.packages!==void 0&&(Array.isArray(n.packages)?n.packages.forEach((i,s)=>{typeof i!="string"&&t.errors.push({path:`packages[${s}]`,message:"package name must be a string",value:i});}):t.errors.push({path:"packages",message:"packages must be an array",value:n.packages})),n.files!==void 0&&(Array.isArray(n.files)?n.files.forEach((i,s)=>{typeof i!="string"&&t.errors.push({path:`files[${s}]`,message:"file path must be a string",value:i});}):t.errors.push({path:"files",message:"files must be an array",value:n.files})),t.valid=t.errors.length===0,t.valid&&(t.config=n),t}validateTypeScriptConfig(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript",message:"typescript config must be an object",value:e}),t;let n=e;n.moduleFormat!==void 0&&(["esm","cjs"].includes(n.moduleFormat)||t.push({path:"typescript.moduleFormat",message:'moduleFormat must be "esm" or "cjs"',value:n.moduleFormat})),n.namingConvention!==void 0&&(["PascalCase","camelCase"].includes(n.namingConvention)||t.push({path:"typescript.namingConvention",message:'namingConvention must be "PascalCase" or "camelCase"',value:n.namingConvention}));let o=["generateIndex","includeDocuments","strictMode","includeProfiles","includeExtensions","includeCodeSystems","includeOperations","generateValueSets","includeValueSetHelpers"];for(let i of o)n[i]!==void 0&&typeof n[i]!="boolean"&&t.push({path:`typescript.${i}`,message:`${i} must be a boolean`,value:n[i]});if(n.validatorOptions!==void 0){let i=this.validateValidatorOptions(n.validatorOptions);t.push(...i);}if(n.guardOptions!==void 0){let i=this.validateGuardOptions(n.guardOptions);t.push(...i);}if(n.profileOptions!==void 0){let i=this.validateProfileOptions(n.profileOptions);t.push(...i);}return t}validateValidatorOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.validatorOptions",message:"validatorOptions must be an object",value:e}),t;let n=e,o=["includeCardinality","includeTypes","includeConstraints","includeInvariants","validateRequired","allowAdditional","strictValidation","collectMetrics","generateAssertions","generatePartialValidators","optimizePerformance","includeJSDoc","generateCompositeValidators"];for(let i of o)n[i]!==void 0&&typeof n[i]!="boolean"&&t.push({path:`typescript.validatorOptions.${i}`,message:`${i} must be a boolean`,value:n[i]});return t}validateGuardOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.guardOptions",message:"guardOptions must be an object",value:e}),t;let n=e;n.targetTSVersion!==void 0&&(["3.8","4.0","4.5","5.0"].includes(n.targetTSVersion)||t.push({path:"typescript.guardOptions.targetTSVersion",message:'targetTSVersion must be one of: "3.8", "4.0", "4.5", "5.0"',value:n.targetTSVersion}));let o=["includeRuntimeValidation","includeErrorMessages","treeShakeable","strictGuards","includeNullChecks","verbose"];for(let i of o)n[i]!==void 0&&typeof n[i]!="boolean"&&t.push({path:`typescript.guardOptions.${i}`,message:`${i} must be a boolean`,value:n[i]});return t}validateProfileOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.profileOptions",message:"profileOptions must be an object",value:e}),t;let n=e;n.generateKind!==void 0&&(["interface","type","both"].includes(n.generateKind)||t.push({path:"typescript.profileOptions.generateKind",message:'generateKind must be "interface", "type", or "both"',value:n.generateKind})),n.subfolder!==void 0&&typeof n.subfolder!="string"&&t.push({path:"typescript.profileOptions.subfolder",message:"subfolder must be a string",value:n.subfolder});let o=["includeConstraints","includeDocumentation","strictMode"];for(let i of o)n[i]!==void 0&&typeof n[i]!="boolean"&&t.push({path:`typescript.profileOptions.${i}`,message:`${i} must be a boolean`,value:n[i]});return t}validateTypeSchemaConfig(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typeSchema",message:"typeSchema config must be an object",value:e}),t;let n=e,o=["enablePersistence","validateCached","forceRegenerate","shareCache"];for(let s of o)n[s]!==void 0&&typeof n[s]!="boolean"&&t.push({path:`typeSchema.${s}`,message:`${s} must be a boolean`,value:n[s]});let i=["cacheDir","cacheKeyPrefix"];for(let s of i)n[s]!==void 0&&typeof n[s]!="string"&&t.push({path:`typeSchema.${s}`,message:`${s} must be a string`,value:n[s]});if(n.maxAge!==void 0&&(typeof n.maxAge!="number"||n.maxAge<=0)&&t.push({path:"typeSchema.maxAge",message:"maxAge must be a positive number",value:n.maxAge}),n.profiles!==void 0)if(typeof n.profiles!="object"||n.profiles===null)t.push({path:"typeSchema.profiles",message:"profiles must be an object",value:n.profiles});else {let s=n.profiles;s.autoDetect!==void 0&&typeof s.autoDetect!="boolean"&&t.push({path:"typeSchema.profiles.autoDetect",message:"autoDetect must be a boolean",value:s.autoDetect});}return t}},Ae=class{validator=new He;async autoload(e=process.cwd()){let t=await this.findConfigFile(e);return t?this.loadFromFile(t):{...Ue}}async loadFromFile(e){try{let t;if(e.endsWith(".ts")||e.endsWith("")){let i=await import(resolve(e));t=i.default||i;}else {let o=await readFile(e,"utf-8");t=JSON.parse(o);}let n=this.validator.validate(t);if(!n.valid){let o=n.errors.map(i=>`${i.path}: ${i.message}`).join(`
|
|
6
|
+
`);for(let r of t)this.line(this.opts.commentLinePrefix,r);}debugComment(...e){this.opts.withDebugComment&&(e=e.map(t=>typeof t=="string"?t:JSON.stringify(t,null,2)),this.comment(...e));}disclaimer(){return ["WARNING: This file is autogenerated by @atomic-ehr/codegen.","GitHub: https://github.com/atomic-ehr/codegen","Any manual changes made to this file may be overwritten."]}generateDisclaimer(){this.disclaimer().forEach(e=>{this.comment(e);}),this.line();}indentBlock(e){this.indent(),e(),this.deindent();}curlyBlock(e,t,r){this.line(`${e.filter(Boolean).join(" ")} {`),this.indent(),t(),this.deindent(),this.line(`}${r?.filter(Boolean).join(" ")??""}`);}squareBlock(e,t,r){this.line(`${e.filter(Boolean).join(" ")} [`),this.indent(),t(),this.deindent(),this.line(`]${r?.filter(Boolean).join(" ")??""}`);}};var ge=(i,e=true)=>{let t=i.split("/").pop();if(t&&(e&&t.includes("#")&&(t=t.split("#")[0]),!!t))return /^\d/.test(t)&&(t=`number_${t}`),t};var b=i=>`${i.name}#${i.version}`,fe=i=>`${i.name}@${i.version}`;var ze=(i,e)=>(e||(e={name:"undefined",version:"undefined"}),{...i,package_meta:i.package_meta||e,name:i.name,url:i.url,base:i.base}),We=i=>i?.kind==="resource";var Q=i=>i?.kind==="complex-type",ee=i=>i?.kind==="primitive-type",M=i=>i?.kind==="nested",Ct=i=>i?.kind==="profile";var B=i=>i?.identifier.kind==="resource"||i?.identifier.kind==="complex-type"||i?.identifier.kind==="logical",qe=i=>i?.identifier.kind==="complex-type",O=i=>i?.identifier.kind==="resource",xt=i=>i?.identifier.kind==="primitive-type",j=i=>i?.identifier.kind==="logical",he=i=>i?.identifier.kind==="profile";function Rt(i){return i?.identifier.kind==="binding"}function kt(i){return i?.identifier.kind==="value-set"}var H=i=>i?i.choices===void 0:false,P=i=>i?i.choices!==void 0:false,Je=i=>i?i.choiceOf!==void 0:false,Ft=(i,e)=>{if(!i.url)throw new Error("ValueSet must have a URL");if(!i.name)throw new Error("ValueSet must have a name");return 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o=Object.values(n);o.sort((s,a)=>s.identifier.name.localeCompare(a.identifier.name)),e[t]=o;}return e},xr=i=>{let e={};for(let r of i)e[r.identifier.name]=r;let t={};for(let r of i){let n=r.identifier.name,o=r.base?.name;t[n]||(t[n]=[]),o&&e[o]&&t[n].push(o);}return t},Rr=i=>{let e=[],t={},r={},n=o=>{if(r[o])throw new Error(`Graph has cycles ${o}`);if(!t[o]){r[o]=true;for(let s of i[o]??[])n(s);r[o]=false,t[o]=true,e.push(o);}};for(let o in i)t[o]||n(o);return e},Ot=i=>{let e=xr(i);return Rr(e).map(r=>i.find(n=>n.identifier.name===r)).filter(Boolean)},kr=i=>{let e=i.filter(o=>O(o)||j(o)||qe(o)),t=[];for(let o of e)o.base&&t.push({parent:o.base,child:o.identifier});let r=[...t],n=o=>{let s=t.filter(c=>c.parent.name===o.name).map(c=>c.child),a=[];for(let c of s)a.push(...n(c));return [...s,...a]};for(let o of t){let s=n(o.child);for(let a of s)t.some(c=>c.parent.name===o.parent.name&&c.child.name===a.name)||r.push({parent:o.parent,child:a});}return 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V{nameFormatFunction;tsIndex;constructor(e){super({...e,resolveAssets:e.resolveAssets??Ye}),this.nameFormatFunction=this.getFieldFormatFunction(e.fieldFormat);}async generate(e){this.tsIndex=e;let t={groupedComplexTypes:z(e.collectComplexTypes()),groupedResources:z(e.collectResources())};this.generateRootPackages(t),this.generateSDKPackages(t);}generateRootPackages(e){this.generateRootInitFile(e),this.cp(Ye("requirements.txt"),"requirements.txt");}generateSDKPackages(e){this.generateComplexTypesPackages(e.groupedComplexTypes),this.generateResourcePackages(e);}generateComplexTypesPackages(e){for(let[t,r]of Object.entries(e))this.cd(`/${F(t)}`,()=>{this.generateBasePy(r);});}generateResourcePackages(e){for(let[t,r]of Object.entries(e.groupedResources))this.cd(`/${F(t)}`,()=>{this.generateResourcePackageContent(t,r,e.groupedComplexTypes[t]||[]);});}generateResourcePackageContent(e,t,r){let 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s=`${e.identifier.name}Family`;this.pyImportFrom(`${t}.resource_families`,s);}return o}collectResourceImportNames(e){let t=[ve(e.identifier)];for(let r of e.nested??[]){let n=ve(r.identifier);t.push(n);}return t}shouldImportResourceFamily(e){return se(this.tsIndex!==void 0),e.identifier.kind==="resource"&&this.tsIndex.resourceChildren(e.identifier).length>0}generateExportsDeclaration(e,t){this.squareBlock(["__all__","="],()=>{let r=[...(e||[]).map(n=>n.identifier.name),...t].sort();for(let n of r)this.line(`'${n}',`);});}generateResourceModule(e){this.cat(`${F(e.identifier.name)}.py`,()=>{this.generateDisclaimer(),this.generateDefaultImports(),this.line(),this.generateDependenciesImports(e),this.line(),this.generateNestedTypes(e),this.line(),this.generateType(e);});}generateType(e){let t=ve(e.identifier),r=this.getSuperClasses(e);this.line(`class ${t}(${r.join(", ")}):`),this.indentBlock(()=>{this.generateClassBody(e);}),this.line();}getSuperClasses(e){return 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o=this.buildFieldInfo(r,n);this.line(`${o.name}: ${o.type}${o.defaultValue}`);}}buildFieldInfo(e,t){let r=$r(this.nameFormatFunction(e)),n=this.determineFieldType(t),o=this.getFieldDefaultValue(t,e);return {name:r,type:n,defaultValue:o}}determineFieldType(e){let t=e?this.getBaseFieldType(e):"";return "enum"in e&&e.enum&&(t=`Literal[${e.enum.map(n=>`"${n}"`).join(", ")}]`),e.array&&(t=`PyList[${t}]`),e.required||(t=`${t} | None`),t}getBaseFieldType(e){return "type"in e&&e.type.kind==="resource"?`${e.type.name}Family`:"type"in e&&e.type.kind==="nested"?ve(e.type):"type"in e&&e.type.kind==="primitive-type"?wr[e.type.name]??"str":"type"in e?e.type.name:""}getFieldDefaultValue(e,t){let r=`alias="${t}", serialization_alias="${t}"`;return e.required?` = Field(${r})`:` = Field(None, ${r})`}generateResourceMethods(e){let t=e.identifier.name.toString();this.line(),this.line("def to_json(self, indent: int | None = None) -> str:"),this.line(" return self.model_dump_json(exclude_unset=True, 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n=`${k(r.name)}Family`,o=`${this.pyFhirPackage(r)}.resource_families`;this.pyImportFrom(o,n);}}groupDependenciesByPackage(e){let t={};for(let r of e){let n=this.pyPackage(r);t[n]||(t[n]=[]),t[n].push(r.name);}return t}pyImportFrom(e,...t){let r=`from ${e} import ${t.join(", ")}`;this.shouldUseSingleLineImport(r,t)?this.line(r):this.writeMultiLineImport(e,t);}shouldUseSingleLineImport(e,t){return e.length<=_t||t.length===1}writeMultiLineImport(e,t){this.line(`from ${e} import (\\`),this.indentBlock(()=>{let r=[...t];for(;r.length>0;){let n=this.buildImportLine(r,_t);this.line(n);}}),this.line(")");}pyImportType(e){this.pyImportFrom(this.pyPackage(e),k(e.name));}generateResourceFamilies(e){se(this.tsIndex!==void 0);let t=Object.keys(z(e)).map(o=>`${this.opts.rootPackageName}.${o.replaceAll(".","_")}`),r={};for(let o of this.tsIndex.collectResources()){let s=this.tsIndex.resourceChildren(o.identifier).map(a=>a.name);if(s.length>0){let a=`${o.identifier.name}Family`;r[a]=s;}}let n=Object.keys(r);n.length!==0&&this.buildResourceFamiliesFile(t,r,n);}buildResourceFamiliesFile(e,t,r){this.cat("resource_families.py",()=>{this.generateDisclaimer(),this.includeResourceFamilyValidator(),this.line(),this.generateFamilyDefinitions(e,t),this.generateFamilyExports(r);});}includeResourceFamilyValidator(){let e=x__default.readFileSync(Ye("resource_family_validator.py"),"utf-8");this.line(e);}generateFamilyDefinitions(e,t){this.line(`packages = [${e.map(r=>`'${r}'`).join(", ")}]`),this.line();for(let[r,n]of Object.entries(t))this.generateFamilyDefinition(r,n);}generateFamilyDefinition(e,t){let r=`${e}_resources`;this.line(`${r} = [${t.map(n=>`'${n}'`).join(", ")}]`),this.line(),this.line(`def validate_and_downcast_${e}(v: Any) -> Any:`),this.line(` return validate_and_downcast(v, packages, ${r})`),this.line(),this.line(`type ${e} = Annotated[Any, BeforeValidator(validate_and_downcast_${e})]`),this.line();}generateFamilyExports(e){this.line(`__all__ = 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r=e.join("."),[n,o,s]=t?[{name:"shared",version:"1.0.0"},t,`urn:fhir:binding:${t}`]:[i.package_meta,`${i.name}.${r}_binding`,`${i.url}#${r}_binding`];return {kind:"binding",package:n.name,version:n.version,name:o,url:s}}function ke(i,e,t,r){let n={};if(e.derivation==="constraint"){let c=i.resolveFsSpecializations(e.package_meta,e.url).map(l=>Ze(i,l,r)).filter(l=>l!==void 0).flat();for(let l of c.reverse())n[l.identifier.name]=l.identifier.url;}let o=t.join("."),s=n[o]??`${e.url}#${o}`;return {kind:"nested",package:e.package_meta.name,version:e.package_meta.version,name:o,url:s}}function Lt(i,e,t){let r=[];for(let[n,o]of Object.entries(t)){let s=[...e,n];re(o)&&r.push([s,o]),o.elements&&r.push(...Lt(i,s,o.elements));}return r}function _r(i,e,t,r,n){let o={};for(let[s,a]of Object.entries(r)){let c=[...t,s],l=i.resolveElementSnapshot(e,c);re(l)?o[s]=Ie(i,e,c,l,n):o[s]=Fe(i,e,c,l,n);}return o}function Ze(i,e,t){if(!e.elements)return;let r=Lt(e,[],e.elements).filter(([o,s])=>s.elements&&Object.keys(s.elements).length>0),n=[];for(let[o,s]of r){let a=ke(i,e,o,t),c;s.type==="BackboneElement"||!s.type?c="BackboneElement":c=s.type;let l=i.ensureSpecializationCanonicalUrl(c),p=i.resolveFs(e.package_meta,l);if(!p)throw new Error(`Could not resolve base type ${c}`);let f={kind:"complex-type",package:p.package_meta.name,version:p.package_meta.version,name:c,url:l},y=_r(i,e,o,s.elements??{},t),d={identifier:a,base:f,fields:y};n.push(d);}return n.sort((o,s)=>o.identifier.url.localeCompare(s.identifier.url)),n.length===0?void 0:n}function Vt(i){let e=[];for(let t of i){t.base&&e.push(t.base);for(let r of Object.values(t.fields||{}))"type"in r&&r.type&&e.push(r.type),"binding"in r&&r.binding&&e.push(r.binding);}return e}function Bt(i,e,t){let r=t[t.length-1];if(!r)throw new Error(`Internal error: fieldName is missing for path ${t.join("/")}`);let n=t.slice(0,-1),o=i.resolveFsGenealogy(e.package_meta,e.url).flatMap(s=>{if(n.length===0)return s.required||[];if(!s.elements)return [];let a=s;for(let c of n)a=a?.elements?.[c];return a?.required||[]});return new Set(o).has(r)}function jt(i,e,t){let r=t[t.length-1];if(!r)throw new Error(`Internal error: fieldName is missing for path ${t.join("/")}`);let n=t.slice(0,-1),o=i.resolveFsGenealogy(e.package_meta,e.url).flatMap(s=>{if(n.length===0)return s.excluded||[];if(!s.elements)return [];let a=s;for(let c of n)a=a?.elements?.[c];return a?.excluded||[]});return new Set(o).has(r)}var Lr=(i,e,t)=>{if(t.refers)return t.refers.map(r=>{let n=i.ensureSpecializationCanonicalUrl(r),o=i.resolveFs(e.package_meta,n);if(!o)throw new Error(`Failed to resolve fs for ${n}`);return W(o)})};function Qe(i,e,t,r,n){if(r.elementReference){let o=r.elementReference.slice(1).filter((s,a)=>a%2===1);return ke(i,e,o,n)}else if(r.type){let o=i.ensureSpecializationCanonicalUrl(r.type),s=i.resolveFs(e.package_meta,o);if(!s)throw new Error(`Could not resolve field type: '${r.type}' (from '${e.url}' in '${b(e.package_meta)}')`);return W(s)}else {if(r.choices)return;if(e.derivation==="constraint")return;throw n?.error(`Can't recognize element type '${e.url}' (${e.derivation}) at '${t.join(".")}': ${JSON.stringify(r,void 0,2)}`),new Error("Unrecognized element type")}}var Fe=(i,e,t,r,n)=>{let o,s;r.binding&&(o=Re(e,t,r.binding.bindingName),r.binding.strength==="required"&&r.type==="code"&&(s=et(i,e,r,n)));let a=Qe(i,e,t,r,n);return a||n?.warn(`Field type not found for '${e.url}#${t.join(".")}' (${e.derivation})`),{type:a,required:Bt(i,e,t),excluded:jt(i,e,t),reference:Lr(i,e,r),array:r.array||false,min:r.min,max:r.max,choices:r.choices,choiceOf:r.choiceOf,binding:o,enum:s}};function re(i){let e=i.type==="BackboneElement",t=i.type==="Element"&&i.elements!==void 0&&Object.keys(i.elements).length>0,r=i.type===void 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n=t.binding.strength,o=t.binding.valueSet;if(!o||!(n==="required"||n==="extensible"&&(t.type==="code"||t.type==="Coding")||n==="preferred"&&(t.type==="code"||t.type==="Coding")))return;let a=tt(i,e.package_meta,o);if(!a||a.length===0)return;let c=a.map(l=>l.code).filter(l=>l&&typeof l=="string"&&l.trim().length>0);if(c.length>Ut){r?.dry_warn(`Value set ${o} has ${c.length} which is more than ${Ut} codes, which may cause issues with code generation.`);return}return c.length>0?c:void 0}function jr(i,e,t,r,n){if(!r.binding?.valueSet)return;let o=Re(e,t,r.binding.bindingName),s=Qe(i,e,t,r,n),a=xe(i,e.package_meta,r.binding.valueSet),c=[];s&&c.push(s),c.push(a);let l=et(i,e,r,n);return {identifier:o,type:s,valueset:a,strength:r.binding.strength,enum:l,dependencies:c}}function At(i,e,t){let r=new Set;if(!e.elements)return [];let n=[];function o(c,l){for(let[p,f]of Object.entries(c)){let y=[...l,p],d=y.join(".");if(!r.has(d)){if(r.add(d),f.binding){let 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{identifier:r,description:e.description,concept:n,compose:n?void 0:e.compose}}function rt(i,e,t,r){let n=[];e&&n.push(e),t&&n.push(...Ar(t)),r&&n.push(...Vt(r));let o={};for(let c of n)c.url!==i.url&&(o[c.url]=c);let s=new Set(r?.map(c=>c.identifier.url)),a=Object.values(o).filter(c=>Ct(i)||!M(c)?true:!s.has(c.url)).sort((c,l)=>c.url.localeCompare(l.url));return a.length>0?a:void 0}function Hr(i,e,t){let r=W(e),n;if(e.base&&e.type!=="Element"){let p=i.resolveFs(e.package_meta,i.ensureSpecializationCanonicalUrl(e.base));if(!p)throw new Error(`Base resource not found '${e.base}' for <${e.url}> from ${b(e.package_meta)}`);n=W(p);}let o=Ur(i,e,[],e.elements,t),s=Ze(i,e,t),a=rt(r,n,o,s),c={identifier:r,base:n,fields:o,nested:s,description:e.description,dependencies:a},l=At(i,e,t);return [c,...l]}async function Pe(i,e,t){let r=Hr(i,e,t);if(Gr(e,W(e))){let n=r[0];if(!n)throw new Error("Expected schema to be defined");n.metadata={isExtension:true};}return r}var it=i=>i!==null&&typeof i=="object"&&i.resourceType==="CodeSystem";var $e=i=>i!==null&&typeof i=="object"&&i.resourceType==="ValueSet";var zr=async(i,e)=>{let r=(await i.packageJson(e.name)).dependencies;return r!==void 0?Object.entries(r).map(([n,o])=>({name:n,version:o})):[]},zt=i=>({pkg:i,canonicalResolution:{},fhirSchemas:{},valueSets:{}}),Wt=async(i,e,t,r,n)=>{let o=b(e);if(n?.info(`${" ".repeat(t*2)}+ ${o}`),r[o])return r[o];let s=zt(e);for(let c of await i.search({package:e})){let l=c.url;if(!l||!(isStructureDefinition(c)||$e(c)||it(c)))continue;let p=l;s.canonicalResolution[p]&&n?.dry_warn(`Duplicate canonical URL: ${p} at ${o}.`),s.canonicalResolution[p]=[{deep:t,pkg:e,pkgId:o,resource:c}];}let a=await zr(i,e);for(let c of a){let{canonicalResolution:l}=await Wt(i,c,t+1,r,n);for(let[p,f]of Object.entries(l)){let y=p;s.canonicalResolution[y]=[...s.canonicalResolution[y]||[],...f];}}for(let c of Object.values(s.canonicalResolution))c.sort((l,p)=>l.deep-p.deep);return r[o]=s,s},Gt=(i,e,t)=>{let r=Object.values(i).flatMap(n=>n.canonicalResolution[e]);if(!r)throw new Error(`No canonical resolution found for ${e} in any package`);return r[0]?.resource},ie=async(i,{logger:e,fallbackPackageForNameResolution:t,focusedPackages:r})=>{let n=r??await i.packages(),o={};for(let d of n)await Wt(i,d,0,o,e);for(let{pkg:d,canonicalResolution:g}of Object.values(o)){let h=b(d);if(!o[h])throw new Error(`Package ${h} not found`);let u=0;e?.info(`FHIR Schema conversion for '${b(d)}' begins...`);for(let[m,S]of Object.entries(g)){let v=S[0];if(!v)throw new Error("Resource not found");let T=v.resource,I=v.pkg;if(isStructureDefinition(T)){let A=ze(Ht.translate(T),I);u++,o[h].fhirSchemas[A.url]=A;}if($e(T)){let A=Ft(T,I);o[h].valueSets[A.url]=A;}}e?.info(`FHIR Schema conversion for '${b(d)}' completed: ${u} successful`);}let s=(d,g)=>o[b(d)]?.fhirSchemas[g]||t&&o[b(t)]?.fhirSchemas[g],a=(d,g)=>o[b(d)]?.valueSets[g]||t&&o[b(t)]?.valueSets[g],c=d=>d.match(/^[a-zA-Z0-9]+$/)&&`http://hl7.org/fhir/StructureDefinition/${d}`||d,l=(d,g)=>{let h=s(d,g);if(h===void 0)throw new Error(`Failed to resolve FHIR Schema: '${g}'`);let u=[h];for(;h?.base;){let m=h.package_meta,S=c(h.base);if(h=s(m,S),h===void 0)throw new Error(`Failed to resolve FHIR Schema base for '${g}'. 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Reason: ${Jt[n]?.[r.url]}`);continue}t.push(...await Pe(i,r,e));}for(let r of i.allVs())t.push(await we(i,r));return t};var Kr=(i,e)=>{let t={},r={};for(let n of e){let o=i.fields?.[n];if(!i.fields||!o)throw new Error(`Field ${n} not found`);if(P(o))r[n]||(r[n]={}),r[n].declaration=o.choices;else if(Je(o)){let s=o.choiceOf;r[s]||(r[s]={}),r[s].instances=[...r[s].instances??[],n];}else t[n]=o;}for(let[n,{declaration:o,instances:s}]of Object.entries(r)){let a=s??o;se(a);for(let l of a){let p=i.fields?.[l];se(p),t[l]=p;}let c=i.fields?.[n];se(c),t[n]={...c,choices:a};}i.fields=t;},Yr=(i,e)=>{for(let t of e){let r=i.fields?.[t];if(!i.fields||!r)throw new Error(`Field ${t} not found`);if(i.fields){if(P(r))for(let n of r.choices)delete i.fields[n];if(Je(r)){let n=i.fields[r.choiceOf];se(P(n)),n.choices=n.choices.filter(o=>o!==t),n.choices.length===0&&delete i.fields[r.choiceOf];}delete i.fields[t];}}},Xr=(i,e,t)=>{if(i=structuredClone(i),xt(i)||kt(i)||Rt(i))return i;if(e.selectFields){if(e.ignoreFields)throw new Error("Cannot use both ignoreFields and selectFields in the same rule");Kr(i,e.selectFields);}if(e.ignoreFields){if(e.selectFields)throw new Error("Cannot use both ignoreFields and selectFields in the same rule");Yr(i,e.ignoreFields);}if(i.nested){let r=new Set,n=o=>{Object.values(o.fields??{}).filter(H).filter(s=>M(s.type)).forEach(s=>{let a=s.type.url;if(!r.has(a)){r.add(a);let c=i.nested?.find(l=>l.identifier.url===a);se(c),n(c);}});};n(i),i.nested=i.nested.filter(o=>r.has(o.identifier.url));}return i.dependencies=rt(i.identifier,i.base,i.fields,i.nested),i},Yt=(i,e,{resolutionTree:t,logger:r})=>{let n=[];for(let[a,c]of Object.entries(e))for(let[l,p]of Object.entries(c)){let f=i.resolveByUrl(a,l);if(!f)throw new Error(`Schema not found for ${a} ${l}`);let y=Xr(f,p);n.push(y);}let o=(a,c)=>{if(a.length===0)return Object.values(c);for(let p of a)c[JSON.stringify(p.identifier)]=p;let l=[];for(let p of a)if(B(p)){if(!p.dependencies)continue;if(p.dependencies.forEach(f=>{let y=i.resolve(f);if(!y)throw new Error(`Dependent schema ${JSON.stringify(f)} not found for ${JSON.stringify(p.identifier)}`);let d=JSON.stringify(y.identifier);c[d]||l.push(y);}),p.nested)for(let f of p.nested){if(M(f.identifier))continue;let y=JSON.stringify(f.identifier);c[y]||l.push(f);}}return o(l,c)},s=o(n,{});return be(s,{resolutionTree:t,logger:r})};var Ee=class{constructor(e){this.mode=e;}apply(e){return this._addDebug(e)}_addDebug(e){if(Array.isArray(e))return e.map(t=>this._addDebug(t));if(e!==null&&typeof e=="object"){let t=e,r={},n=JSON.stringify(t,null,this.mode==="FORMATTED"?2:void 0);for(let[o,s]of Object.entries(t))r[o]=this._addDebug(s);return r.debug=n,r}return e}};var Ne=class{constructor(e){this.nameGenerator=e;this.lambda={saveTypeName:()=>(t,r)=>this.nameGenerator.generateType(r(t)),saveEnumValueName:()=>(t,r)=>this.nameGenerator.generateEnumValue(r(t)),saveFieldName:()=>(t,r)=>this.nameGenerator.generateField(r(t)),camelCase:()=>(t,r)=>K(r(t)),snakeCase:()=>(t,r)=>F(r(t)),pascalCase:()=>(t,r)=>k(r(t)),kebabCase:()=>(t,r)=>me(r(t)),lowerCase:()=>(t,r)=>r(t).toLowerCase(),upperCase:()=>(t,r)=>r(t).toUpperCase()};}lambda;apply(e){return {...e,lambda:this.lambda}}};var Me=class{constructor(e,t,r,n){this.keywords=e;this.typeMap=t;this.nameTransformations=r;this.unsaveCharacterPattern=n;}_replaceUnsaveChars(e){let t=this.unsaveCharacterPattern instanceof RegExp?this.unsaveCharacterPattern:new RegExp(this.unsaveCharacterPattern,"g");return e.replace(t,"_")}_applyNameTransformations(e,t){for(let r of this.nameTransformations.common)e=e.replace(r.pattern instanceof RegExp?r.pattern:new RegExp(r.pattern,"g"),r.format);for(let r of t)e=e.replace(r.pattern instanceof RegExp?r.pattern:new RegExp(r.pattern,"g"),r.format);return e}_generateTypeName(e){if(this.typeMap[e])e=this.typeMap[e];else {if(e=this._applyNameTransformations(e,this.nameTransformations.type),e=e.charAt(0).toUpperCase()+e.slice(1),this.keywords.has(e))return `_${e}`;e=this._replaceUnsaveChars(e);}return e}generateEnumType(e){return this._generateTypeName(e)}_generateTypeFromTypeRef(e){return e.kind==="primitive-type"?this._generateTypeName(e.name):this._generateTypeName(e.url.split("/").pop()?.split("#").map(t=>t.charAt(0).toUpperCase()+t.slice(1)).join("")??"<UNKNOWN>")}generateFieldType(e){return e.enum?this.generateEnumType(e.binding?.name??e.type.name):this._generateTypeFromTypeRef(e.type)}generateType(e){return typeof e=="string"?this._generateTypeName(e):"url"in e?this._generateTypeFromTypeRef(e):this._generateTypeFromTypeRef(e.identifier)}generateField(e){return e=this._applyNameTransformations(e,this.nameTransformations.field),this.keywords.has(e)?`_${e}`:(e=this._replaceUnsaveChars(e),e)}generateEnumValue(e){return e=this._applyNameTransformations(e,this.nameTransformations.enumValue),this.keywords.has(e)?`_${e}`:(e=this._replaceUnsaveChars(e).toUpperCase(),e)}};var Oe=class{templateBaseDir;templateCache={};constructor(e){this.templateBaseDir=N__default.resolve(e);}_normalizeName(e){return e.endsWith(".mustache")?e:`${e}.mustache`}read(e){return this.readTemplate(e.source)}readTemplate(e){let t=this._normalizeName(e);return this.templateCache[t]||(this.templateCache[t]=x__default.readFileSync(N__default.join(this.templateBaseDir,t),"utf-8")),this.templateCache[t]}};var De=class i{static _array(e){return Array.isArray(e)?e:Array.from(e)}apply(e){return this._addListElementInformation(e)}_addListElementInformation(e){if(Array.isArray(e)||e instanceof Set)return i._array(e).map((t,r,n)=>typeof t=="object"&&t!==null?{...this._addListElementInformation(t),"-index":r,"-length":n.length,"-first":r===0,"-last":r===n.length-1}:t);if(e!==null&&typeof e=="object"){let t=e,r={};for(let[n,o]of Object.entries(t))r[n]=this._addListElementInformation(o);return r}return e}};var Zt=["boolean","instant","time","date","dateTime","decimal","integer","unsignedInt","positiveInt","integer64","base64Binary","uri","url","canonical","oid","uuid","string","code","markdown","id","xhtml"];var _e=class{constructor(e,t,r){this.tsIndex=e;this.nameGenerator=t;this.filterPred=r;}arrayMixinProvider=new De;createUtility(){return this._createForRoot()}createComplexType(e,t={resourcesByUri:{},complexTypesByUri:{}}){let r=this._createForComplexType(e,t),n=this._createParentsFor(r.schema,t),o=this._createChildrenFor(e,t),s=n.flatMap(a=>a.fields);return this.arrayMixinProvider.apply({...this._createForRoot(),...r,parents:n,children:o,inheritedFields:s,allFields:[...r.fields,...n.flatMap(a=>a.fields)],hasChildren:o.length>0,hasParents:n.length>0,hasInheritedFields:s.length>0})}createResource(e,t={resourcesByUri:{},complexTypesByUri:{}}){let r=this._createForResource(e,t),n=this._createParentsFor(r.schema,t),o=this._createChildrenFor(e,t),s=n.flatMap(a=>a.fields);return this.arrayMixinProvider.apply({...this._createForRoot(),...r,parents:n,children:o,inheritedFields:s,allFields:[...r.fields,...s],hasChildren:o.length>0,hasParents:n.length>0,hasInheritedFields:s.length>0})}_createFor(e,t,r){if(e.kind==="complex-type")return this._createForComplexType(e,t,r);if(e.kind==="resource")return this._createForResource(e,t,r);throw new Error(`Unknown type ${e.kind}`)}_createForComplexType(e,t,r){let n=this.tsIndex.resolve(e);if(!n)throw new Error(`ComplexType ${e.name} not found`);Object.hasOwn(t.complexTypesByUri,n.identifier.url)||(t.complexTypesByUri[n.identifier.url]=this._createTypeViewModel(n,t,r));let o=t.complexTypesByUri[n.identifier.url];if(!o)throw new Error(`ComplexType ${e.name} not found`);return o}_createForResource(e,t,r){let n=this.tsIndex.resolve(e);if(!n)throw new Error(`Resource ${e.name} not found`);Object.hasOwn(t.resourcesByUri,n.identifier.url)||(t.resourcesByUri[n.identifier.url]=this._createTypeViewModel(n,t,r));let o=t.resourcesByUri[n.identifier.url];if(!o)throw new Error(`Resource ${e.name} not found`);return o}_createChildrenFor(e,t,r){return Q(e)?this.tsIndex.resourceChildren(e).filter(Q).filter(this.filterPred).map(n=>this._createFor(n,t,r)):We(e)?this.tsIndex.resourceChildren(e).filter(We).filter(this.filterPred).map(n=>this._createFor(n,t,r)):[]}_createParentsFor(e,t){let r=[],n="base"in e?e.base:void 0;for(;n;){r.push(this._createFor(n,t,void 0));let o=this.tsIndex.resolve(n);n=o&&"base"in o?o.base:void 0;}return r}_createForNestedType(e,t,r){let n=this._createTypeViewModel(e,t,r),o=this._createParentsFor(e,t),s=this._createChildrenFor(e.identifier,t,r),a=o.flatMap(c=>c.fields);return {...n,parents:o,children:s,inheritedFields:a,allFields:[...n.fields,...a],hasChildren:s.length>0,hasParents:o.length>0,hasInheritedFields:a.length>0}}_createTypeViewModel(e,t,r){let n=Object.entries(("fields"in e?e.fields:{})??{}),o=this._collectNestedComplex(e,t),s=this._collectNestedEnums(n),a=this._collectDependencies(e),c={name:e.identifier.name,saveName:this.nameGenerator.generateType(e)};return {nestedComplexTypes:o,nestedEnums:s,dependencies:a,isNested:!!r,schema:e,...c,isResource:this._createIsResource(e.identifier),isComplexType:this._createIsComplexType(e.identifier),hasFields:n.length>0,hasNestedComplexTypes:o.length>0,hasNestedEnums:s.length>0,fields:n.filter(([l,p])=>!!p.type).sort((l,p)=>l[0].localeCompare(p[0])).map(([l,p])=>({owner:c,schema:p,name:l,saveName:this.nameGenerator.generateField(l),typeName:this.nameGenerator.generateFieldType(p),isArray:p.array,isRequired:p.required,isEnum:!!p.enum,isSizeConstrained:p.min!==void 0||p.max!==void 0,min:p.min,max:p.max,isResource:this._createIsResource(p.type),isComplexType:this._createIsComplexType(p.type),isPrimitive:this._createIsPrimitiveType(p.type),isCode:p.type?.name==="code",isIdentifier:p.type?.name==="Identifier",isReference:p.type?.name==="Reference"}))}}_collectDependencies(e){let t={resources:[],complexTypes:[]};return "dependencies"in e&&e.dependencies&&(e.dependencies.filter(r=>r.kind==="complex-type").map(r=>({name:r.name,saveName:this.nameGenerator.generateType(r)})).forEach(r=>{t.complexTypes.push(r);}),e.dependencies.filter(r=>r.kind==="resource").map(r=>({name:r.name,saveName:this.nameGenerator.generateType(r)})).forEach(r=>{t.resources.push(r);})),"nested"in e&&e.nested&&e.nested.map(r=>this._collectDependencies(r)).forEach(r=>{r.complexTypes.filter(n=>!t.complexTypes.some(o=>o.name===n.name)).forEach(n=>{t.complexTypes.push(n);}),r.resources.filter(n=>!t.resources.some(o=>o.name===n.name)).forEach(n=>{t.resources.push(n);});}),t}_createIsResource(e){return e.kind!=="resource"?false:Object.fromEntries(this.tsIndex.collectResources().map(t=>t.identifier).map(t=>[`is${t.name.charAt(0).toUpperCase()+t.name.slice(1)}`,t.url===e.url]))}_createIsComplexType(e){return e.kind!=="complex-type"&&e.kind!=="nested"?false:Object.fromEntries(this.tsIndex.collectComplexTypes().map(t=>t.identifier).map(t=>[`is${t.name.charAt(0).toUpperCase()+t.name.slice(1)}`,t.url===e.url]))}_createIsPrimitiveType(e){return e.kind!=="primitive-type"?false:Object.fromEntries(Zt.map(t=>[`is${t.charAt(0).toUpperCase()}${t.slice(1)}`,e.name===t]))}_collectNestedComplex(e,t){let r=[];return "nested"in e&&e.nested&&e.nested.map(n=>this._createForNestedType(n,t,e)).forEach(n=>{r.push(n);}),r}_collectNestedEnums(e){let t={};return e.forEach(([r,n])=>{if("enum"in n&&n.enum){let o=("binding"in n&&n.binding?.name)??r;typeof o=="string"&&(t[o]=t[o]??new Set,n.enum?.forEach(t[o].add.bind(t[o])));}}),Object.entries(t).map(([r,n])=>({name:r,saveName:this.nameGenerator.generateEnumType(r),values:Array.from(n).map(o=>({name:o,saveName:this.nameGenerator.generateEnumValue(o)}))}))}_createForRoot(){return this.arrayMixinProvider.apply({complexTypes:this.tsIndex.collectComplexTypes().map(e=>e.identifier).map(e=>({name:e.name,saveName:this.nameGenerator.generateType(e)})),resources:this.tsIndex.collectResources().map(e=>e.identifier).map(e=>({name:e.name,saveName:this.nameGenerator.generateType(e)}))})}};function ti(i,e){let t=N.resolve(i,"config.json");try{let r=x.readFileSync(t,"utf-8"),n=JSON.parse(r);if(n&&typeof n=="object")return n}catch{}return {}}var er=(i,e)=>{let t={debug:"OFF",hooks:{},meta:{},keywords:[],unsaveCharacterPattern:/[^a-zA-Z0-9]/g,nameTransformations:{common:[],enumValue:[],type:[],field:[]},renderings:{utility:[],resource:[],complexType:[]},shouldRunHooks:true,primitiveTypeMap:{}},r=ti(i),n={...t,...e,...r,sources:{staticSource:N.resolve(i,"static"),templateSource:N.resolve(i,"templates")}};return new ot(n)};function ri(i,e=[],t={}){return new Promise((r,n)=>{let o=spawn(i,e,{stdio:"inherit",...t});o.on("error",n),o.on("close",s=>{s===0?r(s):n(new Error(`Prozess beendet mit Fehlercode ${s}`));});})}var ot=class extends Z{templateFileCache;nameGenerator;lambdaMixinProvider;debugMixinProvider;constructor(e){super(e),this.nameGenerator=new Me(new Set(e.keywords),e.primitiveTypeMap,e.nameTransformations,e.unsaveCharacterPattern),this.templateFileCache=new Oe(e.sources.templateSource),this.lambdaMixinProvider=new Ne(this.nameGenerator),this.debugMixinProvider=e.debug!=="OFF"?new Ee(e.debug):void 0;}async generate(e){let t=new _e(e,this.nameGenerator,()=>true),r={resourcesByUri:{},complexTypesByUri:{}};e.collectComplexTypes().map(n=>n.identifier).sort((n,o)=>n.url.localeCompare(o.url)).map(n=>t.createComplexType(n,r)).forEach(this._renderComplexType.bind(this)),e.collectResources().map(n=>n.identifier).sort((n,o)=>n.url.localeCompare(o.url)).map(n=>t.createResource(n,r)).forEach(this._renderResource.bind(this)),this._renderUtility(t.createUtility()),this.copyStaticFiles(),this.opts.shouldRunHooks&&await this._runHooks(this.opts.hooks.afterGenerate);}copyStaticFiles(){let e=N.resolve(this.opts.sources.staticSource);if(!e)throw new Error("staticDir must be set in subclass.");x.cpSync(e,this.opts.outputDir,{recursive:true});}async _runHooks(e){for(let t of e??[])console.info(`Running hook (${this.opts.outputDir}): ${t.cmd} ${t.args?.join(" ")}`),await ri(t.cmd,t.args??[],{cwd:this.opts.outputDir}),console.info(`Completed hook: ${t.cmd} ${t.args?.join(" ")}`);}_checkRenderingFilter(e,t){return !t.filter?.whitelist?.length&&!t.filter?.blacklist?.length?true:(t.filter?.blacklist??[]).find(r=>e.name.match(r))?false:(t.filter?.whitelist??[]).find(r=>e.name.match(r))?true:!t.filter.whitelist?.length}_renderUtility(e){this.opts.renderings.utility.forEach(t=>{this.cd(t.path,()=>{this.cat(t.fileNameFormat,()=>{this.write(this._render(e,t));});});});}_renderResource(e){this.opts.renderings.resource.filter(t=>this._checkRenderingFilter(e,t)).forEach(t=>{this.cd(t.path,()=>{this.cat(this._calculateFilename(e,t),()=>{this.write(this._render(e,t));});});});}_renderComplexType(e){this.opts.renderings.complexType.filter(t=>this._checkRenderingFilter(e,t)).forEach(t=>{this.cd(t.path,()=>{this.cat(this._calculateFilename(e,t),()=>{this.write(this._render(e,t));});});});}_calculateFilename(e,t){return Qt.format(t.fileNameFormat,e.saveName)}_render(e,t){let r=this.lambdaMixinProvider.apply({meta:{timestamp:this.opts.meta.timestamp??new Date().toISOString(),generator:this.opts.meta.generator??"@atomic-ehr/codegen mustache generator"},model:e,properties:t.properties??{}});return this.debugMixinProvider&&(r=this.debugMixinProvider.apply(r)),ei.render(this.templateFileCache.read(t),r,n=>this.templateFileCache.readTemplate(n))}};var ni={boolean:"boolean",instant:"string",time:"string",date:"string",dateTime:"string",decimal:"number",integer:"number",unsignedInt:"number",positiveInt:"number",integer64:"number",base64Binary:"string",uri:"string",url:"string",canonical:"string",oid:"string",uuid:"string",string:"string",code:"string",markdown:"string",id:"string",xhtml:"string"},tr=i=>{let e=ni[i];if(e===void 0)throw new Error(`Unknown primitive type ${i}`);return e},ir=i=>me(i),ct=i=>i.kind==="profile"?`${R(i)}_profile`:k(i.name),oi=i=>`${ct(i)}.ts`,Ve=i=>`${ir(i.package)}/${ct(i)}`,st=(i,e=true)=>{if(!i)return;let t=ge(i,e);if(t)return at(t)},R=i=>{if(i.kind==="nested"){let e=i.url,t=st(e,false);if(!t)return "";let[r,n]=t.split("#"),o=Y((n??"").split(".")).join("");return at([r,o].join(""))}return at(i.name)},nr=new Set(["class","function","return","if","for","while","const","let","var","import","export","interface"]),X=i=>nr.has(i)?`"${i}"`:i.includes(" ")||i.includes("-")?`"${i}"`:i,at=i=>(nr.has(i)&&(i=`${i}_`),i.replace(/[- ]/g,"_")),q=(i,e)=>e.startsWith('"')?`${i}[${e}]`:`${i}.${e}`,rr=i=>`(${i.map(e=>`"${e}"`).join(" | ")})`,Be=class extends V{tsImportType(e,...t){this.lineSM(`import type { ${t.join(", ")} } from "${e}"`);}generateFhirPackageIndexFile(e){this.cat("index.ts",()=>{let t=e.flatMap(r=>[{identifier:r.identifier,tsPackageName:ct(r.identifier),resourceName:R(r.identifier),nestedTypes:O(r)&&r.nested||j(r)&&r.nested?r.nested.map(n=>R(n.identifier)):[],helpers:O(r)||j(r)?[`is${R(r.identifier)}`]:[]}]).sort((r,n)=>r.resourceName.localeCompare(n.resourceName));t=Array.from(new Map(t.map(r=>[r.resourceName.toLowerCase(),r])).values()).sort((r,n)=>r.resourceName.localeCompare(n.resourceName));for(let r of t)this.debugComment(r.identifier),this.lineSM(`export type { ${[r.resourceName,...r.nestedTypes].join(", ")} } from "./${r.tsPackageName}"`),r.helpers.length>0&&this.lineSM(`export { ${r.helpers.join(", ")} } from "./${r.tsPackageName}"`);});}generateDependenciesImports(e,t){if(t.dependencies){let r=[],n=[];for(let o of t.dependencies)if(["complex-type","resource","logical"].includes(o.kind))r.push({tsPackage:`../${Ve(o)}`,name:E(o.name),dep:o});else if(M(o)){let s={...o};s.name=st(o.url),r.push({tsPackage:`../${Ve(s)}`,name:R(o),dep:o});}else n.push(o);r.sort((o,s)=>o.name.localeCompare(s.name));for(let o of r)this.debugComment(o.dep),this.tsImportType(o.tsPackage,o.name);for(let o of n)this.debugComment("skip:",o);if(this.line(),this.withPrimitiveTypeExtension(t)&&t.identifier.name!=="Element"&&t.dependencies.find(o=>o.name==="Element")===void 0){let o="http://hl7.org/fhir/StructureDefinition/Element",s=e.resolveByUrl(t.identifier.package,o);if(!s)throw new Error(`'${o}' not found for ${t.identifier.package}.`);this.tsImportType(`../${Ve(s.identifier)}`,"Element");}}}generateComplexTypeReexports(e){let t=e.dependencies?.filter(Q).map(r=>({tsPackage:`../${Ve(r)}`,name:E(r.name)}));if(t&&t.length>0){for(let r of t)this.lineSM(`export type { ${r.name} } from "${r.tsPackage}"`);this.line();}}addFieldExtension(e){let t=X(`_${e}`);this.lineSM(`${t}?: Element`);}generateType(e,t){let r;t.identifier.name==="Reference"?r="Reference<T extends string = string>":(t.identifier.kind,r=R(t.identifier));let n;if(t.base&&(n=`extends ${st(t.base.url)}`),this.debugComment(t.identifier),!t.fields&&!n&&!O(t)){this.lineSM(`export type ${r} = object`);return}this.curlyBlock(["export","interface",r,n],()=>{if(O(t)||j(t)){let s=[t.identifier];s.push(...e.resourceChildren(t.identifier));let a=this.opts.openResourceTypeSet&&s.length>1?" | string":"";this.lineSM(`resourceType: ${s.sort((c,l)=>c.name.localeCompare(l.name)).map(c=>`"${c.name}"`).join(" | ")}${a}`),this.line();}if(!t.fields)return;let o=Object.entries(t.fields).sort((s,a)=>s[0].localeCompare(a[0]));for(let[s,a]of o){if(P(a))continue;this.debugComment(s,":",a);let c=X(s),l;a.enum?l=rr(a.enum):t.identifier.name==="Reference"&&c==="reference"?l="`${T}/${string}`":a.reference&&a.reference.length>0?l=`Reference<${a.reference.map(d=>`"${d.name}"`).join(" | ")}>`:ee(a.type)?l=tr(a.type.name):M(a.type)?l=R(a.type):l=a.type.name;let p=a.required?"":"?",f=a.array?"[]":"";this.lineSM(`${c}${p}: ${l}${f}`),this.withPrimitiveTypeExtension(t)&&ee(a.type)&&this.addFieldExtension(s);}});}withPrimitiveTypeExtension(e){if(!this.opts.primitiveTypeExtension||!B(e))return false;for(let t of Object.values(e.fields??{}))if(!P(t)&&ee(t.type))return true;return false}generateResourceTypePredicate(e){if(!O(e)&&!j(e))return;let t=R(e.identifier);this.curlyBlock(["export","const",`is${t}`,"=",`(resource: unknown): resource is ${t}`,"=>"],()=>{this.lineSM(`return resource !== null && typeof resource === "object" && (resource as {resourceType: string}).resourceType === "${e.identifier.name}"`);});}generateNestedTypes(e,t){if(t.nested)for(let r of t.nested)this.generateType(e,r),this.line();}generateProfileType(e,t){this.debugComment("flatProfile",t);let r=R(t.identifier);this.debugComment("identifier",t.identifier),this.debugComment("base",t.base),this.curlyBlock(["export","interface",r],()=>{this.lineSM(`__profileUrl: "${t.identifier.url}"`),this.line();for(let[n,o]of Object.entries(t.fields??{})){if(P(o))continue;this.debugComment(n,o);let s=X(n),a;if(o.enum)a=rr(o.enum);else if(o.reference&&o.reference.length>0){let c=e.findLastSpecialization(t);if(!B(c))throw new Error(`Invalid specialization for ${t.identifier}`);let l=c.fields?.[n];if(l===void 0||P(l)||l.reference===void 0)throw new Error(`Invalid field declaration for ${n}`);let p=l.reference.map(y=>y.name),f=o.reference.map(y=>{let d=e.findLastSpecializationByIdentifier(y);return d.name!==y.name?`"${d.name}" /*${y.name}*/`:`'${y.name}'`}).join(" | ");p.length===1&&p[0]==="Resource"&&f!=='"Resource"'?a=`Reference<"Resource" /* ${f} */ >`:a=`Reference<${f}>`;}else if(M(o.type))a=R(o.type);else if(ee(o.type))a=tr(o.type.name);else {if(o.type===void 0)throw new Error(`Undefined type for '${n}' field at ${vt(t)}`);a=o.type.name;}this.lineSM(`${s}${o.required?"":"?"}: ${a}${o.array?"[]":""}`);}}),this.line();}generateAttachProfile(e){let t=R(e.base),r=R(e.identifier),n=Object.entries(e.fields||{}).filter(([o,s])=>s&&H(s)&&s.type!==void 0).map(([o])=>X(o));this.curlyBlock([`export const attach_${r}_to_${t} =`,`(resource: ${t}, profile: ${r}): ${t}`,"=>"],()=>{this.curlyBlock(["return"],()=>{this.line("...resource,"),this.curlyBlock(["meta:"],()=>{this.line(`profile: ['${e.identifier.url}']`);},[","]),n.forEach(o=>{this.line(`${o}: ${q("profile",o)},`);});});}),this.line();}generateExtractProfile(e,t){let r=R(t.base),n=R(t.identifier),o=Object.entries(t.fields||{}).filter(([c,l])=>H(l)&&l.type!==void 0).map(([c])=>c),s=e.findLastSpecialization(t);if(!B(s))throw new Error(`Specialization not found for ${t.identifier.url}`);let a={};this.curlyBlock([`export const extract_${n}_from_${r} =`,`(resource: ${r}): ${n}`,"=>"],()=>{o.forEach(c=>{let l=X(c),p=t.fields?.[c],f=s.fields?.[c];if(!H(p)||!H(f))return;p.required&&!f.required&&this.curlyBlock([`if (${q("resource",l)} === undefined)`],()=>this.lineSM(`throw new Error("'${l}' is required for ${t.identifier.url}")`));let y=p?.reference?.map(g=>g.name),d=f?.reference?.map(g=>g.name);if(y&&d&&y.length!==d.length){let g=`reference_is_valid_${l}`;this.curlyBlock(["const",g,"=","(ref?: Reference)","=>"],()=>{this.line("return !ref"),this.indentBlock(()=>{d.forEach(u=>{this.line(`|| ref.reference?.startsWith('${u}/')`);}),this.line(";");});});let h=p?.required?"":`!${q("resource",l)} || `;p.array?h+=`${q("resource",l)}.every( (ref) => ${g}(ref) )`:h+=`!${g}(${q("resource",l)})`,this.curlyBlock(["if (",h,")"],()=>{this.lineSM(`throw new Error("'${c}' has different references in profile and specialization")`);}),this.line(),a[c]=true;}}),this.curlyBlock(["return"],()=>{this.line(`__profileUrl: '${t.identifier.url}',`),o.forEach(c=>{let l=X(c);a[c]?this.line(`${l}:`,`${q("resource",l)} as ${n}['${l}'],`):this.line(`${l}:`,`${q("resource",l)},`);});});});}generateResourceModule(e,t){this.cat(`${oi(t.identifier)}`,()=>{if(this.generateDisclaimer(),["complex-type","resource","logical"].includes(t.identifier.kind))this.generateDependenciesImports(e,t),this.generateComplexTypeReexports(t),this.generateNestedTypes(e,t),this.comment("CanonicalURL:",t.identifier.url),this.generateType(e,t),this.generateResourceTypePredicate(t);else if(he(t)){let r=e.flatProfile(t);this.generateDependenciesImports(e,r),this.comment("CanonicalURL:",t.identifier.url),this.generateProfileType(e,r),this.generateAttachProfile(r),this.generateExtractProfile(e,r);}else throw new Error(`Profile generation not implemented for kind: ${t.identifier.kind}`)});}async generate(e){let t=[...e.collectComplexTypes(),...e.collectResources(),...e.collectLogicalModels(),...this.opts.generateProfile?e.collectProfiles().filter(n=>e.isWithMetaField(n)):[]],r=z(t);this.cd("/",()=>{for(let[n,o]of Object.entries(r)){let s=ir(n);this.cd(s,()=>{for(let a of o)this.generateResourceModule(e,a);this.generateFhirPackageIndexFile(o);});}});}};var or=i=>{let e=i.replace(/[^a-zA-Z0-9\-_.@#()]/g,"");return e.length===0?"unknown":e},ai=async(i,e)=>{e.info("Cleaning outputs...");try{e.info(`Clean ${i.outputDir}`),x.rmSync(i.outputDir,{recursive:!0,force:!0}),i.typeSchemaOutputDir&&(e.info(`Clean ${i.typeSchemaOutputDir}`),x.rmSync(i.typeSchemaOutputDir,{recursive:!0,force:!0})),i.exportTypeTree&&(e.info(`Clean ${i.exportTypeTree}`),x.rmSync(i.exportTypeTree,{recursive:!0,force:!0}));}catch(t){e.warn(`Error cleaning output directory: ${t instanceof Error?t.message:String(t)}`);}},ci=async(i,e,t)=>{await U.mkdir(e,{recursive:true}),t.info(`Writing TypeSchema files to ${e}/...`);let r={};for(let n of i){let o={name:n.identifier.package,version:n.identifier.version},s=or(b(o)),a=or(`${n.identifier.name}(${ge(n.identifier.url)})`),c=JSON.stringify(n,null,2),l=N.join(e,s,a);r[l]||(r[l]=[]),r[l]?.some(p=>p===c)||r[l].push(c);}for(let[n,o]of Object.entries(r))await Promise.all(o.map(async(s,a)=>{let c;a===0?c=`${n}.typeschema.json`:c=`${n}-${a}.typeschema.json`,await U.mkdir(N.dirname(c),{recursive:true}),await U.writeFile(c,s);}));},li=async(i,e,t)=>{t.info(`Writing TypeSchema files to: ${e}`),await U.mkdir(N.dirname(e),{recursive:true}),t.info(`Writing TypeSchemas to one file ${e}...`);for(let r of i){let n=JSON.stringify(r,null,2);await U.appendFile(e,`${n}
|
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|
+
`);}},pi=async(i,e,t)=>{if(e.typeSchemaOutputDir)try{N.extname(e.typeSchemaOutputDir)===".ndjson"?await li(i,e.typeSchemaOutputDir,t):await ci(i,e.typeSchemaOutputDir,t),t.info("Writing TypeSchema - DONE");}catch(r){if(t.error("Failed to write TypeSchema output",r instanceof Error?r:new Error(String(r))),e.throwException)throw r}},ce=class{schemas=[];options;generators=new Map;logger;packages=[];localStructurePackages=[];localTgzArchives=[];progressCallback;typeSchemaConfig;constructor(e={}){this.options={outputDir:e.outputDir||"./generated",overwrite:e.overwrite??true,cache:e.cache??true,cleanOutput:e.cleanOutput??true,typeSchemaConfig:e.typeSchemaConfig,manager:e.manager||null,throwException:e.throwException||false,typeSchemaOutputDir:e.typeSchemaOutputDir,exportTypeTree:e.exportTypeTree,treeShake:e.treeShake,registry:e.registry},this.typeSchemaConfig=e.typeSchemaConfig,this.logger=e.logger||L({prefix:"API",level:e.logLevel});}fromPackage(e,t){let r=fe({name:e,version:t||"latest"});return this.packages.push(r),this}fromPackageRef(e){return this.packages.push(e),this}registry(e){return this.options.registry=e,this}localStructureDefinitions(e){return this.localStructurePackages.push(e),this}localTgzPackage(e){return this.localTgzArchives.push(N.resolve(e)),this}fromSchemas(e){return this.logger.debug(`Adding ${e.length} TypeSchemas to generation`),this.schemas=[...this.schemas,...e],this}typescript(e){let n={...{...{logger:this.logger,outputDir:N.join(this.options.outputDir,"/types"),tabSize:4,withDebugComment:false,commentLinePrefix:"//",generateProfile:true},openResourceTypeSet:false,primitiveTypeExtension:true},...Object.fromEntries(Object.entries(e).filter(([s,a])=>a!==void 0))},o=new Be(n);return this.generators.set("typescript",o),this.logger.debug(`Configured TypeScript generator (${JSON.stringify(n,void 0,2)})`),this}python(e){let n={...{...{logger:this.logger,outputDir:this.options.outputDir,tabSize:4,withDebugComment:false,commentLinePrefix:"#"},rootPackageName:"fhir_types",fieldFormat:"snake_case"},...Object.fromEntries(Object.entries(e).filter(([s,a])=>a!==void 0))},o=new Ce(n);return this.generators.set("python",o),this.logger.debug("Configured python generator"),this}mustache(e,t){let r={logger:this.logger,outputDir:this.options.outputDir},n={meta:{timestamp:new Date().toISOString(),generator:"atomic-codegen"}},o={...r,...n,...t},s=er(e,o);return this.generators.set(`mustache[${e}]`,s),this.logger.debug(`Configured TypeScript generator (${JSON.stringify(o,void 0,2)})`),this}csharp(e){let n={...{...{logger:this.logger,outputDir:N.join(this.options.outputDir,"/types"),tabSize:4,withDebugComment:false,commentLinePrefix:"//"},rootNamespace:"Fhir.Types"},...Object.fromEntries(Object.entries(e).filter(([s,a])=>a!==void 0))},o=new Se(n);return this.generators.set("csharp",o),this.logger.debug("Configured C# generator"),this}onProgress(e){return this.progressCallback=e,this}outputTo(e){this.logger.debug(`Setting output directory: ${e}`),this.options.outputDir=e;for(let t of this.generators.values())t.setOutputDir(e);return this}setLogLevel(e){return this.logger?.setLevel(typeof e=="string"?gt(e):e),this}throwException(e=true){return this.options.throwException=e,this}cleanOutput(e=true){return this.options.cleanOutput=e,this}writeTypeTree(e){return this.options.exportTypeTree=e,this}treeShake(e){return this.options.treeShake=e,this}writeTypeSchemas(e){return this.options.typeSchemaOutputDir=e,this}async generate(){let e=performance.now(),t={success:false,outputDir:this.options.outputDir,filesGenerated:{},errors:[],warnings:[],duration:0};this.logger.debug(`Starting generation with ${this.generators.size} generators`);try{this.options.cleanOutput&&ai(this.options,this.logger),this.logger.info("Initialize Canonical Manager");let r=this.options.manager||CanonicalManager({packages:this.packages,workingDir:".codegen-cache/canonical-manager-cache",registry:this.options.registry||void 0});if(this.localStructurePackages.length>0)for(let p of this.localStructurePackages)this.logger.info(`Registering local StructureDefinitions for ${p.package.name}@${p.package.version}`),await r.addLocalPackage({name:p.package.name,version:p.package.version,path:p.path,dependencies:p.dependencies?.map(f=>fe(f))});for(let p of this.localTgzArchives)this.logger.info(`Registering local tgz package: ${p}`),await r.addTgzPackage({archivePath:p});let n=await r.init(),o=Object.values(n),s=await ie(r,{logger:this.logger,focusedPackages:o}),a=await Kt(s,this.logger);await pi(a,this.options,this.logger);let c={resolutionTree:s.resolutionTree(),logger:this.logger},l=be(a,c);this.options.treeShake&&(l=Yt(l,this.options.treeShake,c)),this.options.exportTypeTree&&await l.exportTree(this.options.exportTypeTree),this.logger.debug(`Executing ${this.generators.size} generators`),await this.executeGenerators(t,l),this.logger.info("Generation completed successfully"),t.success=t.errors.length===0,this.logger.debug(`Generation completed: ${t.filesGenerated.length} files`);}catch(r){if(this.logger.error("Code generation failed",r instanceof Error?r:new Error(String(r))),t.errors.push(r instanceof Error?r.message:String(r)),this.options.throwException)throw r}return {...t,success:t.errors.length===0,duration:performance.now()-e}}reset(){return this.schemas=[],this.generators.clear(),this.progressCallback=void 0,this.packages=[],this.localStructurePackages=[],this.localTgzArchives=[],this}getSchemas(){return [...this.schemas]}getGenerators(){return Array.from(this.generators.keys())}async executeGenerators(e,t){for(let[r,n]of this.generators.entries()){this.logger.info(`Generating ${r}...`);try{await n.generate(t),n.writtenFiles().forEach(s=>{e.filesGenerated[s.relPath]=s.content;}),this.logger.info(`Generating ${r} finished successfully`);}catch(o){if(e.errors.push(`${r} generator failed: ${o instanceof Error?o.message:String(o)}`),this.options.throwException)throw o}}}};var lt={outputDir:"./generated",verbose:false,overwrite:true,validate:true,cache:true,cleanOutput:true,registry:"",typescript:{moduleFormat:"esm",generateIndex:true,includeDocuments:false,namingConvention:"PascalCase",strictMode:true,includeProfiles:true,includeExtensions:false,includeCodeSystems:false,includeOperations:false,generateValueSets:false,valueSetDirectory:"valuesets",valueSetMode:"required-only",valueSetStrengths:["required"],includeValueSetHelpers:false,fhirVersion:"R4",resourceTypes:[],maxDepth:10,profileOptions:{generateKind:"interface",includeConstraints:true,includeDocumentation:true,strictMode:false,subfolder:"profiles"},generateBuilders:false,builderOptions:{includeValidation:true,includeFactoryMethods:true,includeInterfaces:true,generateNestedBuilders:true,includeHelperMethods:true,supportPartialBuild:true,includeJSDoc:true,generateFactories:true,includeTypeGuards:true,handleChoiceTypes:true,generateArrayHelpers:true},validatorOptions:{includeCardinality:true,includeTypes:true,includeConstraints:true,includeInvariants:false,validateRequired:true,allowAdditional:false,strictValidation:false,collectMetrics:false,generateAssertions:true,generatePartialValidators:true,optimizePerformance:true,includeJSDoc:true,generateCompositeValidators:true},guardOptions:{includeRuntimeValidation:true,includeErrorMessages:true,treeShakeable:true,targetTSVersion:"5.0",strictGuards:false,includeNullChecks:true,verbose:false}},typeSchema:{enablePersistence:true,cacheDir:".typeschema-cache",maxAge:1440*60*1e3,validateCached:true,forceRegenerate:false,shareCache:true,cacheKeyPrefix:"",treeshake:[],singleFile:false,profiles:{autoDetect:true}},packages:[],files:[],$schema:""},Ue=["atomic-codegen.config.ts","atomic-codegen.config","atomic-codegen.config.json",".atomic-codegenrc","atomic-codegen.json",".atomic-codegen.json","codegen.config.json","codegen.json"],pt=class{validate(e){let t={valid:true,errors:[],warnings:[]};if(!e||typeof e!="object")return t.valid=false,t.errors.push({path:"root",message:"Configuration must be an object",value:e}),t;let r=e;r.outputDir!==void 0&&typeof r.outputDir!="string"&&t.errors.push({path:"outputDir",message:"outputDir must be a string",value:r.outputDir});let n=["verbose","overwrite","validate","cache"];for(let o of n)r[o]!==void 0&&typeof r[o]!="boolean"&&t.errors.push({path:o,message:`${o} must be a boolean`,value:r[o]});if(r.typescript!==void 0){let o=this.validateTypeScriptConfig(r.typescript);t.errors.push(...o);}if(r.typeSchema!==void 0){let o=this.validateTypeSchemaConfig(r.typeSchema);t.errors.push(...o);}return r.packages!==void 0&&(Array.isArray(r.packages)?r.packages.forEach((o,s)=>{typeof o!="string"&&t.errors.push({path:`packages[${s}]`,message:"package name must be a string",value:o});}):t.errors.push({path:"packages",message:"packages must be an array",value:r.packages})),r.files!==void 0&&(Array.isArray(r.files)?r.files.forEach((o,s)=>{typeof o!="string"&&t.errors.push({path:`files[${s}]`,message:"file path must be a string",value:o});}):t.errors.push({path:"files",message:"files must be an array",value:r.files})),t.valid=t.errors.length===0,t.valid&&(t.config=r),t}validateTypeScriptConfig(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript",message:"typescript config must be an object",value:e}),t;let r=e;r.moduleFormat!==void 0&&(["esm","cjs"].includes(r.moduleFormat)||t.push({path:"typescript.moduleFormat",message:'moduleFormat must be "esm" or "cjs"',value:r.moduleFormat})),r.namingConvention!==void 0&&(["PascalCase","camelCase"].includes(r.namingConvention)||t.push({path:"typescript.namingConvention",message:'namingConvention must be "PascalCase" or "camelCase"',value:r.namingConvention}));let n=["generateIndex","includeDocuments","strictMode","includeProfiles","includeExtensions","includeCodeSystems","includeOperations","generateValueSets","includeValueSetHelpers"];for(let o of n)r[o]!==void 0&&typeof r[o]!="boolean"&&t.push({path:`typescript.${o}`,message:`${o} must be a boolean`,value:r[o]});if(r.validatorOptions!==void 0){let o=this.validateValidatorOptions(r.validatorOptions);t.push(...o);}if(r.guardOptions!==void 0){let o=this.validateGuardOptions(r.guardOptions);t.push(...o);}if(r.profileOptions!==void 0){let o=this.validateProfileOptions(r.profileOptions);t.push(...o);}return t}validateValidatorOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.validatorOptions",message:"validatorOptions must be an object",value:e}),t;let r=e,n=["includeCardinality","includeTypes","includeConstraints","includeInvariants","validateRequired","allowAdditional","strictValidation","collectMetrics","generateAssertions","generatePartialValidators","optimizePerformance","includeJSDoc","generateCompositeValidators"];for(let o of n)r[o]!==void 0&&typeof r[o]!="boolean"&&t.push({path:`typescript.validatorOptions.${o}`,message:`${o} must be a boolean`,value:r[o]});return t}validateGuardOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.guardOptions",message:"guardOptions must be an object",value:e}),t;let r=e;r.targetTSVersion!==void 0&&(["3.8","4.0","4.5","5.0"].includes(r.targetTSVersion)||t.push({path:"typescript.guardOptions.targetTSVersion",message:'targetTSVersion must be one of: "3.8", "4.0", "4.5", "5.0"',value:r.targetTSVersion}));let n=["includeRuntimeValidation","includeErrorMessages","treeShakeable","strictGuards","includeNullChecks","verbose"];for(let o of n)r[o]!==void 0&&typeof r[o]!="boolean"&&t.push({path:`typescript.guardOptions.${o}`,message:`${o} must be a boolean`,value:r[o]});return t}validateProfileOptions(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typescript.profileOptions",message:"profileOptions must be an object",value:e}),t;let r=e;r.generateKind!==void 0&&(["interface","type","both"].includes(r.generateKind)||t.push({path:"typescript.profileOptions.generateKind",message:'generateKind must be "interface", "type", or "both"',value:r.generateKind})),r.subfolder!==void 0&&typeof r.subfolder!="string"&&t.push({path:"typescript.profileOptions.subfolder",message:"subfolder must be a string",value:r.subfolder});let n=["includeConstraints","includeDocumentation","strictMode"];for(let o of n)r[o]!==void 0&&typeof r[o]!="boolean"&&t.push({path:`typescript.profileOptions.${o}`,message:`${o} must be a boolean`,value:r[o]});return t}validateTypeSchemaConfig(e){let t=[];if(typeof e!="object"||e===null)return t.push({path:"typeSchema",message:"typeSchema config must be an object",value:e}),t;let r=e,n=["enablePersistence","validateCached","forceRegenerate","shareCache"];for(let s of n)r[s]!==void 0&&typeof r[s]!="boolean"&&t.push({path:`typeSchema.${s}`,message:`${s} must be a boolean`,value:r[s]});let o=["cacheDir","cacheKeyPrefix"];for(let s of o)r[s]!==void 0&&typeof r[s]!="string"&&t.push({path:`typeSchema.${s}`,message:`${s} must be a string`,value:r[s]});if(r.maxAge!==void 0&&(typeof r.maxAge!="number"||r.maxAge<=0)&&t.push({path:"typeSchema.maxAge",message:"maxAge must be a positive number",value:r.maxAge}),r.profiles!==void 0)if(typeof r.profiles!="object"||r.profiles===null)t.push({path:"typeSchema.profiles",message:"profiles must be an object",value:r.profiles});else {let s=r.profiles;s.autoDetect!==void 0&&typeof s.autoDetect!="boolean"&&t.push({path:"typeSchema.profiles.autoDetect",message:"autoDetect must be a boolean",value:s.autoDetect});}return t}},dt=class{validator=new pt;async autoload(e=process.cwd()){let t=await this.findConfigFile(e);return t?this.loadFromFile(t):{...lt}}async loadFromFile(e){try{let t;if(e.endsWith(".ts")||e.endsWith("")){let o=await import(resolve(e));t=o.default||o;}else {let n=await readFile(e,"utf-8");t=JSON.parse(n);}let r=this.validator.validate(t);if(!r.valid){let n=r.errors.map(o=>`${o.path}: ${o.message}`).join(`
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`);throw new Error(`Configuration validation failed:
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${
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${n}`)}if(!r.config)throw new Error("Invalid configuration");return this.mergeWithDefaults(r.config)}catch(t){throw t instanceof Error?new Error(`Failed to load config from ${e}: ${t.message}`):t}}async findConfigFile(e){for(let t of Ue){let r=resolve(e,t);if(existsSync(r))return r}return null}mergeWithDefaults(e){return {...lt,...e,typescript:{...lt.typescript,...e.typescript}}}},gi=new dt;async function Ae(i){return gi.autoload(i)}var ar={command:"generate",describe:"Generate code based on configuration file settings",builder:i=>i.option("verbose",{alias:"v",type:"boolean",default:false,description:"Enable verbose output"}).example("$0 generate","Generate code using settings from config file").example("$0 generate --verbose","Generate with verbose output"),handler:async i=>{if(i._.length>1){let s=i._.slice(1).join(" ");w(`Invalid syntax: 'atomic-codegen generate ${s}'
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Create an atomic-codegen.config.ts file to get started.`),process.exit(1);}let e=process.cwd(),t=await
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Create an atomic-codegen.config.ts file to get started.`),process.exit(1);}let e=process.cwd(),t=await yi(e);if(!t){let s=Ue.map(a=>` - ${a}`).join(`
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});`),process.exit(1);}let r=await Ae(e),n=i.verbose??r.verbose??false,o=L({prefix:"Generate"});try{ht("Starting generation from config"),n&&(o.info(`Config file: ${t}`),o.info(`Output directory: ${r.outputDir||"./generated"}`),o.info(`Packages: ${r.packages?.length||0}`),o.info(`Files: ${r.files?.length||0}`),o.info(`TypeScript generation: ${r.typescript?"enabled":"disabled"}`));let s=new ce({outputDir:r.outputDir||"./generated",overwrite:r.overwrite??!0,cache:r.cache??!0,typeSchemaConfig:r.typeSchema,logger:o});if(r.packages&&r.packages.length>0){o.info(`Loading packages from config: ${r.packages.join(", ")}`);for(let c of r.packages){let[l,p]=c.includes("@")?c.split("@"):[c,void 0];s.fromPackage(l,p);}}else throw r.files&&r.files.length>0?(o.info(`Loading files from config: ${r.files.join(", ")}`),new Error("Not Implemented")):new Error("No data source specified in config. Please configure 'packages' or 'files' in your config file.");if(r.typescript)throw new Error("Not Implemented");if(!r.typescript)throw new Error("No generators configured. Please enable 'typescript' in your config file.");n&&s.onProgress((c,l,p,f)=>{let y=Math.round(l/p*100);o.progress(`[${c}] ${y}% - ${f||"Processing..."}`);}),o.step("Executing generation...");let a=await s.generate();if(a.success){if(Ge(`Generated ${a.filesGenerated.length} files in ${a.duration.toFixed(2)}ms`),o.dim(`Output directory: ${a.outputDir}`),a.warnings.length>0)for(let c of a.warnings)ft(c);}else {w(`Generation failed with ${a.errors.length} errors`);for(let c of a.errors)o.dim(` ${c}`);process.exit(1);}}catch(s){w("Generation failed with unexpected error",s instanceof Error?s:new Error(String(s))),process.exit(1);}}};async function yi(i){for(let e of Ue){let t=resolve(i,e);if(existsSync(t))return t}return null}var cr={command:"generate <packages..>",describe:"Generate TypeSchema files from FHIR packages",builder:{packages:{type:"string",array:true,demandOption:true,describe:"FHIR packages to process (e.g., hl7.fhir.r4.core@4.0.1)"},output:{alias:"o",type:"string",describe:"Output file or directory",default:"./schemas.ndjson"},format:{alias:"f",type:"string",choices:["ndjson","json"],default:"ndjson",describe:"Output format for TypeSchema files"},treeshake:{alias:"t",type:"string",array:true,describe:"Only generate TypeSchemas for specific ResourceTypes (treeshaking)"},singleFile:{alias:"s",type:"boolean",default:false,describe:"Generate single TypeSchema file instead of multiple files (NDJSON format)"},verbose:{alias:"v",type:"boolean",default:false,describe:"Enable verbose output"},registry:{alias:"r",type:"string",describe:"Custom FHIR package registry URL (default: https://fs.get-ig.org/pkgs/)"}},handler:async i=>{let e=L({prefix:"TypeSchema"});try{let t=await Ae(process.cwd());e.step("Generating TypeSchema from FHIR packages"),e.info(`Packages: ${i.packages.join(", ")}`),e.info(`Output: ${i.output}`);let r=i.singleFile!==void 0?i.singleFile:t.typeSchema?.singleFile??!1,n=r?"ndjson":i.format;e.debug(`Format: ${n}${r&&i.format==="json"?" (forced from json due to singleFile)":""}`);let o=i.treeshake&&i.treeshake.length>0?i.treeshake:t.typeSchema?.treeshake;o&&o.length>0&&e.info(`Treeshaking enabled for ResourceTypes: ${o.join(", ")}`),r&&e.info("Single file output enabled (NDJSON format)");let s=i.registry||t.registry;s&&e.info(`Using custom registry: ${s}`);let a=Date.now(),c=new ne({treeshake:o,registry:s,manager:CanonicalManager({packages:[],workingDir:".codegen-cache/canonical-manager-cache",registry:s})}),l=[];for(let d of i.packages){let[g,h]=d.includes("@")?d.split("@"):[d,void 0];e.progress(`Processing package: ${g}${h?`@${h}`:""}`);let u=await c.generateFromPackage(g,h,e);l.push(...u);}if(l.length===0)throw new Error("No schemas were generated from the specified packages");let p=i.output;if(!p)throw new Error("Output format not specified");await mkdir(dirname(p),{recursive:!0});let f;n==="json"?f=JSON.stringify(l,null,2):f=l.map(d=>JSON.stringify(d)).join(`
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`),await writeFile(p,f,"utf-8");let y=Date.now()-a;if(Tt(`Generated ${l.length} TypeSchema definitions`,y,{schemas:l.length}),e.dim(`Output: ${p}`),i.verbose){e.debug("Generated schemas:");let d=l.map(g=>`${g.identifier?.name||"Unknown"} (${g.identifier?.kind||"unknown"})`);J(d);}}catch(t){e.error("Failed to generate TypeSchema",t instanceof Error?t:new Error(String(t))),process.exit(1);}}};var lr={command:"typeschema [subcommand]",describe:"TypeSchema operations - generate, validate and merge schemas",builder:i=>i.command(cr).help().example("$0 typeschema generate hl7.fhir.r4.core@4.0.1","Generate TypeSchema from FHIR R4 core package"),handler:i=>{if(!i.subcommand&&i._.length===1){He("Available typeschema subcommands:"),J(["generate Generate TypeSchema files from FHIR packages"]),console.log(`
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Use 'atomic-codegen typeschema <subcommand> --help' for more information about a subcommand.`),console.log(`
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Examples:`),
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`),
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Use 'atomic-codegen typeschema <subcommand> --help' for more information about a subcommand.`),process.exit(1));}};async function
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Examples:`),J(["atomic-codegen typeschema generate hl7.fhir.r4.core@4.0.1 -o schemas.ndjson","atomic-codegen typeschema validate schemas.ndjson","atomic-codegen typeschema merge schema1.ndjson schema2.ndjson -o merged.ndjson"]);return}i.subcommand&&!["generate","validate","merge"].includes(i.subcommand)&&(w(`Unknown typeschema subcommand: ${i.subcommand}
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`),He("Available typeschema subcommands:"),J(["generate Generate TypeSchema files from FHIR packages","validate Validate TypeSchema files for correctness and consistency","merge Merge multiple TypeSchema files into a single file"]),console.log(`
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Use 'atomic-codegen typeschema <subcommand> --help' for more information about a subcommand.`),process.exit(1));}};function Ri(i){return i?{debug:0,info:1,warn:2,error:3,silent:4}[i.toLowerCase()]:void 0}async function ki(i){let e=Ri(i.logLevel);e===void 0&&(i.debug||i.verbose?e=0:e=1),yt({timestamp:i.debug,level:e});}function Fi(){return Ci(hideBin(process.argv)).scriptName("atomic-codegen").usage("$0 <command> [options]").middleware(ki).command(lr).command(ar).option("verbose",{alias:"v",type:"boolean",description:"Enable verbose output",default:false,global:true}).option("debug",{alias:"d",type:"boolean",description:"Enable debug output with detailed logging",default:false,global:true}).option("log-level",{alias:"l",type:"string",choices:["debug","info","warn","error","silent"],description:"Set the log level (default: info)",global:true}).option("config",{alias:"c",type:"string",description:"Path to configuration file (.atomic-codegen.json by default)",global:true}).demandCommand(0).middleware(i=>{i._.length===0&&(St("Welcome to Atomic Codegen!"),console.log("Available commands:"),console.log(" typeschema Generate, validate and merge TypeSchema files"),console.log(" generate Generate code based on configuration file"),console.log(`
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Use 'atomic-codegen <command> --help' for more information about a command.`),console.log(`
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Quick examples:`),console.log(" atomic-codegen typeschema generate hl7.fhir.r4.core@4.0.1 -o schemas.ndjson"),console.log(" atomic-codegen generate # Uses atomic-codegen.config.ts"),console.log(`
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Use 'atomic-codegen --help' to see all options.`),process.exit(0));}).help().version("0.1.0").example("$0 generate","Generate code using atomic-codegen.config.ts").example("$0 generate --verbose","Generate with detailed progress output").example("$0 --config custom-config.ts generate","Use custom configuration file").example("$0 typeschema generate hl7.fhir.r4.core@4.0.1 -o schemas.ndjson","Generate TypeSchemas from FHIR package").fail((
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Use --help for usage information`),process.exit(1);}).wrap(Math.min(120,process.stdout.columns||80))}async function
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Use 'atomic-codegen --help' to see all options.`),process.exit(0));}).help().version("0.1.0").example("$0 generate","Generate code using atomic-codegen.config.ts").example("$0 generate --verbose","Generate with detailed progress output").example("$0 --config custom-config.ts generate","Use custom configuration file").example("$0 typeschema generate hl7.fhir.r4.core@4.0.1 -o schemas.ndjson","Generate TypeSchemas from FHIR package").fail((i,e,t)=>{e?w(e.message,e):w(i),w(`
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Use --help for usage information`),process.exit(1);}).wrap(Math.min(120,process.stdout.columns||80))}async function ut(){await Fi().parseAsync();}import.meta.main&&ut().catch(i=>{i("Unexpected error:",i),process.exit(1);});ut().catch(i=>{console.error("CLI Error:",i instanceof Error?i.message:i),process.exit(1);});
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