@atomic-ehr/codegen 0.0.1-canary.20250930075344.1c0b689 → 0.0.1-canary.20250930124137.175bd5f

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Files changed (10) hide show
  1. package/dist/cli/index.js +16 -16
  2. package/dist/typeschema/core/field-builder.js +1 -1
  3. package/dist/typeschema/core/transformer.d.ts +1 -2
  4. package/dist/typeschema/core/transformer.js +18 -25
  5. package/dist/typeschema/generator.js +2 -2
  6. package/dist/typeschema/profile/processor.d.ts +1 -1
  7. package/dist/typeschema/profile/processor.js +2 -2
  8. package/dist/typeschema/register.d.ts +7 -6
  9. package/dist/typeschema/register.js +18 -6
  10. package/package.json +1 -1
package/dist/cli/index.js CHANGED
@@ -13,20 +13,20 @@ import{createRequire as w6}from"node:module";var N6=Object.create;var{getPrototy
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  `).trim()}
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  `}generateSimpleExports(D){D.push("// Exports");let F=Array.from(this.exports.entries());if(this.sortFunction)F=F.sort(this.sortFunction);else F=F.sort(([E],[B])=>E.localeCompare(B));let u=new Map;for(let[E,B]of F){if(!u.has(B))u.set(B,[]);u.get(B)?.push(E)}for(let[E,B]of u){let C=B.sort();if(C.length===1)D.push(`export type { ${C[0]} } from './${E}';`);else if(C.length<=3)D.push(`export type { ${C.join(", ")} } from './${E}';`);else D.push("export type {"),C.forEach(($,X)=>{let Q=X===C.length-1;D.push(` ${$}${Q?"":","}`)}),D.push(`} from './${E}';`)}}generateGroupedExports(D){if(!this.groupingFunction)return;let F=new Map;for(let[E,B]of this.exports){let C=this.groupingFunction(E);if(!F.has(C))F.set(C,new Map);let $=F.get(C);if(!$.has(B))$.set(B,[]);$.get(B)?.push(E)}let u=Array.from(F.entries()).sort();for(let[E,B]of u){D.push(`// ${E}`);for(let[C,$]of B){let X=$.sort();if(X.length===1)D.push(`export type { ${X[0]} } from './${C}';`);else D.push(`export type { ${X.join(", ")} } from './${C}';`)}D.push("")}}getExports(){return new Map(this.exports)}getNamespaces(){return new Map(this.namespaces)}getReExports(){return new Map(this.reExports)}}import{notStrictEqual as O8,strictEqual as J8}from"assert";var b6={right:S6,center:v6};class E1{constructor(D){var F;this.width=D.width,this.wrap=(F=D.wrap)!==null&&F!==void 0?F:!0,this.rows=[]}span(...D){let F=this.div(...D);F.span=!0}resetOutput(){this.rows=[]}div(...D){if(D.length===0)this.div("");if(this.wrap&&this.shouldApplyLayoutDSL(...D)&&typeof D[0]==="string")return this.applyLayoutDSL(D[0]);let F=D.map((u)=>{if(typeof u==="string")return this.colFromString(u);return u});return this.rows.push(F),F}shouldApplyLayoutDSL(...D){return D.length===1&&typeof D[0]==="string"&&/[\t\n]/.test(D[0])}applyLayoutDSL(D){let F=D.split(`
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  `).map((E)=>E.split("\t")),u=0;return F.forEach((E)=>{if(E.length>1&&WD.stringWidth(E[0])>u)u=Math.min(Math.floor(this.width*0.5),WD.stringWidth(E[0]))}),F.forEach((E)=>{this.div(...E.map((B,C)=>{return{text:B.trim(),padding:this.measurePadding(B),width:C===0&&E.length>1?u:void 0}}))}),this.rows[this.rows.length-1]}colFromString(D){return{text:D,padding:this.measurePadding(D)}}measurePadding(D){let F=WD.stripAnsi(D);return[0,F.match(/\s*$/)[0].length,0,F.match(/^\s*/)[0].length]}toString(){let D=[];return this.rows.forEach((F)=>{this.rowToString(F,D)}),D.filter((F)=>!F.hidden).map((F)=>F.text).join(`
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- `)}rowToString(D,F){return this.rasterize(D).forEach((u,E)=>{let B="";u.forEach((C,$)=>{let{width:X}=D[$],Q=this.negatePadding(D[$]),z=C;if(Q>WD.stringWidth(C))z+=" ".repeat(Q-WD.stringWidth(C));if(D[$].align&&D[$].align!=="left"&&this.wrap){let O=b6[D[$].align];if(z=O(z,Q),WD.stringWidth(z)<Q)z+=" ".repeat((X||0)-WD.stringWidth(z)-1)}let J=D[$].padding||[0,0,0,0];if(J[3])B+=" ".repeat(J[3]);if(B+=u1(D[$],z,"| "),B+=z,B+=u1(D[$],z," |"),J[1])B+=" ".repeat(J[1]);if(E===0&&F.length>0)B=this.renderInline(B,F[F.length-1])}),F.push({text:B.replace(/ +$/,""),span:D.span})}),F}renderInline(D,F){let u=D.match(/^ */),E=u?u[0].length:0,B=F.text,C=WD.stringWidth(B.trimRight());if(!F.span)return D;if(!this.wrap)return F.hidden=!0,B+D;if(E<C)return D;return F.hidden=!0,B.trimRight()+" ".repeat(E-C)+D.trimLeft()}rasterize(D){let F=[],u=this.columnWidths(D),E;return D.forEach((B,C)=>{if(B.width=u[C],this.wrap)E=WD.wrap(B.text,this.negatePadding(B),{hard:!0}).split(`
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+ `)}rowToString(D,F){return this.rasterize(D).forEach((u,E)=>{let B="";u.forEach((C,$)=>{let{width:X}=D[$],Q=this.negatePadding(D[$]),z=C;if(Q>WD.stringWidth(C))z+=" ".repeat(Q-WD.stringWidth(C));if(D[$].align&&D[$].align!=="left"&&this.wrap){let W=b6[D[$].align];if(z=W(z,Q),WD.stringWidth(z)<Q)z+=" ".repeat((X||0)-WD.stringWidth(z)-1)}let J=D[$].padding||[0,0,0,0];if(J[3])B+=" ".repeat(J[3]);if(B+=u1(D[$],z,"| "),B+=z,B+=u1(D[$],z," |"),J[1])B+=" ".repeat(J[1]);if(E===0&&F.length>0)B=this.renderInline(B,F[F.length-1])}),F.push({text:B.replace(/ +$/,""),span:D.span})}),F}renderInline(D,F){let u=D.match(/^ */),E=u?u[0].length:0,B=F.text,C=WD.stringWidth(B.trimRight());if(!F.span)return D;if(!this.wrap)return F.hidden=!0,B+D;if(E<C)return D;return F.hidden=!0,B.trimRight()+" ".repeat(E-C)+D.trimLeft()}rasterize(D){let F=[],u=this.columnWidths(D),E;return D.forEach((B,C)=>{if(B.width=u[C],this.wrap)E=WD.wrap(B.text,this.negatePadding(B),{hard:!0}).split(`
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PD=E.getWrap(),t=F.cliui({width:PD,wrap:!!PD});if(!J){if(z.length)z.forEach((f)=>{if(t.div({text:`${f[0].replace(/\$0/g,V)}`}),f[1])t.div({text:`${f[1]}`,padding:[1,0,0,0]})}),t.div();else if(Y.length){let f=null;if(y._)f=`${V} <${u("command")}>
26
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  `;else f=`${V} [${u("command")}]
27
- `;t.div(`${f}`)}}if(W.length>1||W.length===1&&!W[0][2]){t.div(u("Commands:"));let f=D.getInternalMethods().getContext(),i=f.commands.length?`${f.commands.join(" ")} `:"";if(D.getInternalMethods().getParserConfiguration()["sort-commands"]===!0)W=W.sort((m,zD)=>m[0].localeCompare(zD[0]));let BD=V?`${V} `:"";W.forEach((m)=>{let zD=`${BD}${i}${m[0].replace(/^\$0 ?/,"")}`;t.span({text:zD,padding:[0,2,0,2],width:p(W,PD,`${V}${i}`)+4},{text:m[1]});let e=[];if(m[2])e.push(`[${u("default")}]`);if(m[3]&&m[3].length)e.push(`[${u("aliases:")} ${m[3].join(", ")}]`);if(m[4])if(typeof m[4]==="string")e.push(`[${u("deprecated: %s",m[4])}]`);else e.push(`[${u("deprecated")}]`);if(e.length)t.div({text:e.join(" "),padding:[0,0,0,2],align:"right"});else t.div()}),t.div()}let bD=(Object.keys(o.alias)||[]).concat(Object.keys(D.parsed.newAliases)||[]);ED=ED.filter((f)=>!D.parsed.newAliases[f]&&bD.every((i)=>(o.alias[i]||[]).indexOf(f)===-1));let H0=u("Options:");if(!uD[H0])uD[H0]=[];U(ED,o.alias,uD,H0);let v=(f)=>/^--/.test(y0(f)),Q0=Object.keys(uD).filter((f)=>uD[f].length>0).map((f)=>{let i=uD[f].filter(j).map((BD)=>{if(bD.includes(BD))return BD;for(let m=0,zD;(zD=bD[m])!==void 0;m++)if((o.alias[zD]||[]).includes(BD))return zD;return BD});return{groupName:f,normalizedKeys:i}}).filter(({normalizedKeys:f})=>f.length>0).map(({groupName:f,normalizedKeys:i})=>{let BD=i.reduce((m,zD)=>{return m[zD]=[zD].concat(o.alias[zD]||[]).map((e)=>{if(f===E.getPositionalGroupName())return e;else return(/^[0-9]$/.test(e)?o.boolean.includes(zD)?"-":"--":e.length>1?"--":"-")+e}).sort((e,CD)=>v(e)===v(CD)?0:v(e)?1:-1).join(", "),m},{});return{groupName:f,normalizedKeys:i,switches:BD}});if(Q0.filter(({groupName:f})=>f!==E.getPositionalGroupName()).some(({normalizedKeys:f,switches:i})=>!f.every((BD)=>v(i[BD]))))Q0.filter(({groupName:f})=>f!==E.getPositionalGroupName()).forEach(({normalizedKeys:f,switches:i})=>{f.forEach((BD)=>{if(v(i[BD]))i[BD]=b8(i[BD],4)})});if(Q0.forEach(({groupName:f,normalizedKeys:i,switches:BD})=>{t.div(f),i.forEach((m)=>{let zD=BD[m],e=q[m]||"",CD=null;if(e.includes(c))e=u(e.substring(c.length));if(o.boolean.includes(m))CD=`[${u("boolean")}]`;if(o.count.includes(m))CD=`[${u("count")}]`;if(o.string.includes(m))CD=`[${u("string")}]`;if(o.normalize.includes(m))CD=`[${u("string")}]`;if(o.array.includes(m))CD=`[${u("array")}]`;if(o.number.includes(m))CD=`[${u("number")}]`;let KF=(K)=>typeof K==="string"?`[${u("deprecated: %s",K)}]`:`[${u("deprecated")}]`,Y=[m in n?KF(n[m]):null,CD,m in w?`[${u("required")}]`:null,o.choices&&o.choices[m]?`[${u("choices:")} ${E.stringifiedValues(o.choices[m])}]`:null,S(o.default[m],o.defaultDescription[m])].filter(Boolean).join(" ");t.span({text:y0(zD),padding:[0,2,0,2+n1(zD)],width:p(BD,PD)+4},e);let A=D.getInternalMethods().getUsageConfiguration()["hide-types"]===!0;if(Y&&!A)t.div({text:Y,padding:[0,0,0,2],align:"right"});else t.div()}),t.div()}),O.length)t.div(u("Examples:")),O.forEach((f)=>{f[0]=f[0].replace(/\$0/g,V)}),O.forEach((f)=>{if(f[1]==="")t.div({text:f[0],padding:[0,2,0,2]});else t.div({text:f[0],padding:[0,2,0,2],width:p(O,PD)+4},{text:f[1]})}),t.div();if(_.length>0){let f=_.map((i)=>i.replace(/\$0/g,V)).join(`
27
+ `;t.div(`${f}`)}}if(Y.length>1||Y.length===1&&!Y[0][2]){t.div(u("Commands:"));let f=D.getInternalMethods().getContext(),i=f.commands.length?`${f.commands.join(" ")} `:"";if(D.getInternalMethods().getParserConfiguration()["sort-commands"]===!0)Y=Y.sort((m,zD)=>m[0].localeCompare(zD[0]));let BD=V?`${V} `:"";Y.forEach((m)=>{let zD=`${BD}${i}${m[0].replace(/^\$0 ?/,"")}`;t.span({text:zD,padding:[0,2,0,2],width:p(Y,PD,`${V}${i}`)+4},{text:m[1]});let e=[];if(m[2])e.push(`[${u("default")}]`);if(m[3]&&m[3].length)e.push(`[${u("aliases:")} ${m[3].join(", ")}]`);if(m[4])if(typeof m[4]==="string")e.push(`[${u("deprecated: %s",m[4])}]`);else e.push(`[${u("deprecated")}]`);if(e.length)t.div({text:e.join(" "),padding:[0,0,0,2],align:"right"});else t.div()}),t.div()}let bD=(Object.keys(o.alias)||[]).concat(Object.keys(D.parsed.newAliases)||[]);ED=ED.filter((f)=>!D.parsed.newAliases[f]&&bD.every((i)=>(o.alias[i]||[]).indexOf(f)===-1));let H0=u("Options:");if(!uD[H0])uD[H0]=[];U(ED,o.alias,uD,H0);let v=(f)=>/^--/.test(y0(f)),Q0=Object.keys(uD).filter((f)=>uD[f].length>0).map((f)=>{let i=uD[f].filter(j).map((BD)=>{if(bD.includes(BD))return BD;for(let m=0,zD;(zD=bD[m])!==void 0;m++)if((o.alias[zD]||[]).includes(BD))return zD;return BD});return{groupName:f,normalizedKeys:i}}).filter(({normalizedKeys:f})=>f.length>0).map(({groupName:f,normalizedKeys:i})=>{let BD=i.reduce((m,zD)=>{return m[zD]=[zD].concat(o.alias[zD]||[]).map((e)=>{if(f===E.getPositionalGroupName())return e;else return(/^[0-9]$/.test(e)?o.boolean.includes(zD)?"-":"--":e.length>1?"--":"-")+e}).sort((e,CD)=>v(e)===v(CD)?0:v(e)?1:-1).join(", "),m},{});return{groupName:f,normalizedKeys:i,switches:BD}});if(Q0.filter(({groupName:f})=>f!==E.getPositionalGroupName()).some(({normalizedKeys:f,switches:i})=>!f.every((BD)=>v(i[BD]))))Q0.filter(({groupName:f})=>f!==E.getPositionalGroupName()).forEach(({normalizedKeys:f,switches:i})=>{f.forEach((BD)=>{if(v(i[BD]))i[BD]=b8(i[BD],4)})});if(Q0.forEach(({groupName:f,normalizedKeys:i,switches:BD})=>{t.div(f),i.forEach((m)=>{let zD=BD[m],e=q[m]||"",CD=null;if(e.includes(c))e=u(e.substring(c.length));if(o.boolean.includes(m))CD=`[${u("boolean")}]`;if(o.count.includes(m))CD=`[${u("count")}]`;if(o.string.includes(m))CD=`[${u("string")}]`;if(o.normalize.includes(m))CD=`[${u("string")}]`;if(o.array.includes(m))CD=`[${u("array")}]`;if(o.number.includes(m))CD=`[${u("number")}]`;let KF=(K)=>typeof K==="string"?`[${u("deprecated: %s",K)}]`:`[${u("deprecated")}]`,O=[m in n?KF(n[m]):null,CD,m in w?`[${u("required")}]`:null,o.choices&&o.choices[m]?`[${u("choices:")} ${E.stringifiedValues(o.choices[m])}]`:null,S(o.default[m],o.defaultDescription[m])].filter(Boolean).join(" ");t.span({text:y0(zD),padding:[0,2,0,2+n1(zD)],width:p(BD,PD)+4},e);let A=D.getInternalMethods().getUsageConfiguration()["hide-types"]===!0;if(O&&!A)t.div({text:O,padding:[0,0,0,2],align:"right"});else t.div()}),t.div()}),W.length)t.div(u("Examples:")),W.forEach((f)=>{f[0]=f[0].replace(/\$0/g,V)}),W.forEach((f)=>{if(f[1]==="")t.div({text:f[0],padding:[0,2,0,2]});else t.div({text:f[0],padding:[0,2,0,2],width:p(W,PD)+4},{text:f[1]})}),t.div();if(_.length>0){let f=_.map((i)=>i.replace(/\$0/g,V)).join(`
28
28
  `);t.div(`${f}
29
- `)}return t.toString().replace(/\s*$/,"")};function p(L,V,w){let y=0;if(!Array.isArray(L))L=Object.values(L).map((n)=>[n]);if(L.forEach((n)=>{y=Math.max(F.stringWidth(w?`${w} ${y0(n[0])}`:y0(n[0]))+n1(n[0]),y)}),V)y=Math.min(y,parseInt((V*0.5).toString(),10));return y}function QD(){let L=D.getDemandedOptions(),V=D.getOptions();(Object.keys(V.alias)||[]).forEach((w)=>{V.alias[w].forEach((y)=>{if(q[y])E.describe(w,q[y]);if(y in L)D.demandOption(w,L[y]);if(V.boolean.includes(y))D.boolean(w);if(V.count.includes(y))D.count(w);if(V.string.includes(y))D.string(w);if(V.normalize.includes(y))D.normalize(w);if(V.array.includes(y))D.array(w);if(V.number.includes(y))D.number(w)})})}let d;E.cacheHelpMessage=function(){d=this.help()},E.clearCachedHelpMessage=function(){d=void 0},E.hasCachedHelpMessage=function(){return!!d};function U(L,V,w,y){let n=[],uD=null;return Object.keys(w).forEach((o)=>{n=n.concat(w[o])}),L.forEach((o)=>{if(uD=[o].concat(V[o]),!uD.some((ED)=>n.indexOf(ED)!==-1))w[y].push(o)}),n}function j(L){return D.getOptions().hiddenOptions.indexOf(L)<0||D.parsed.argv[D.getOptions().showHiddenOpt]}E.showHelp=(L)=>{let V=D.getInternalMethods().getLoggerInstance();if(!L)L="error";(typeof L==="function"?L:V[L])(E.help())},E.functionDescription=(L)=>{return["(",L.name?F.Parser.decamelize(L.name,"-"):u("generated-value"),")"].join("")},E.stringifiedValues=function(V,w){let y="",n=w||", ",uD=[].concat(V);if(!V||!uD.length)return y;return uD.forEach((o)=>{if(y.length)y+=n;y+=JSON.stringify(o)}),y};function S(L,V){let w=`[${u("default:")} `;if(L===void 0&&!V)return null;if(V)w+=V;else switch(typeof L){case"string":w+=`"${L}"`;break;case"object":w+=JSON.stringify(L);break;default:w+=L}return`${w}]`}function l(){if(F.process.stdColumns)return Math.min(80,F.process.stdColumns);else return 80}let g=null;E.version=(L)=>{g=L},E.showVersion=(L)=>{let V=D.getInternalMethods().getLoggerInstance();if(!L)L="error";(typeof L==="function"?L:V[L])(g)},E.reset=function(V){return C=null,Q=!1,z=[],J=!1,_=[],O=[],W=[],q=vD(q,(w)=>!V[w]),E};let ND=[];return E.freeze=function(){ND.push({failMessage:C,failureOutput:Q,usages:z,usageDisabled:J,epilogs:_,examples:O,commands:W,descriptions:q})},E.unfreeze=function(V=!1){let w=ND.pop();if(!w)return;if(V)q={...w.descriptions,...q},W=[...w.commands,...W],z=[...w.usages,...z],O=[...w.examples,...O],_=[...w.epilogs,..._];else({failMessage:C,failureOutput:Q,usages:z,usageDisabled:J,epilogs:_,examples:O,commands:W,descriptions:q}=w)},E}function mF(D){return typeof D==="object"}function b8(D,F){return mF(D)?{text:D.text,indentation:D.indentation+F}:{text:D,indentation:F}}function n1(D){return mF(D)?D.indentation:0}function y0(D){return mF(D)?D.text:D}var t1=`###-begin-{{app_name}}-completions-###
29
+ `)}return t.toString().replace(/\s*$/,"")};function p(L,V,w){let y=0;if(!Array.isArray(L))L=Object.values(L).map((n)=>[n]);if(L.forEach((n)=>{y=Math.max(F.stringWidth(w?`${w} ${y0(n[0])}`:y0(n[0]))+n1(n[0]),y)}),V)y=Math.min(y,parseInt((V*0.5).toString(),10));return y}function QD(){let L=D.getDemandedOptions(),V=D.getOptions();(Object.keys(V.alias)||[]).forEach((w)=>{V.alias[w].forEach((y)=>{if(q[y])E.describe(w,q[y]);if(y in L)D.demandOption(w,L[y]);if(V.boolean.includes(y))D.boolean(w);if(V.count.includes(y))D.count(w);if(V.string.includes(y))D.string(w);if(V.normalize.includes(y))D.normalize(w);if(V.array.includes(y))D.array(w);if(V.number.includes(y))D.number(w)})})}let d;E.cacheHelpMessage=function(){d=this.help()},E.clearCachedHelpMessage=function(){d=void 0},E.hasCachedHelpMessage=function(){return!!d};function U(L,V,w,y){let n=[],uD=null;return Object.keys(w).forEach((o)=>{n=n.concat(w[o])}),L.forEach((o)=>{if(uD=[o].concat(V[o]),!uD.some((ED)=>n.indexOf(ED)!==-1))w[y].push(o)}),n}function j(L){return D.getOptions().hiddenOptions.indexOf(L)<0||D.parsed.argv[D.getOptions().showHiddenOpt]}E.showHelp=(L)=>{let V=D.getInternalMethods().getLoggerInstance();if(!L)L="error";(typeof L==="function"?L:V[L])(E.help())},E.functionDescription=(L)=>{return["(",L.name?F.Parser.decamelize(L.name,"-"):u("generated-value"),")"].join("")},E.stringifiedValues=function(V,w){let y="",n=w||", ",uD=[].concat(V);if(!V||!uD.length)return y;return uD.forEach((o)=>{if(y.length)y+=n;y+=JSON.stringify(o)}),y};function S(L,V){let w=`[${u("default:")} `;if(L===void 0&&!V)return null;if(V)w+=V;else switch(typeof L){case"string":w+=`"${L}"`;break;case"object":w+=JSON.stringify(L);break;default:w+=L}return`${w}]`}function l(){if(F.process.stdColumns)return Math.min(80,F.process.stdColumns);else return 80}let g=null;E.version=(L)=>{g=L},E.showVersion=(L)=>{let V=D.getInternalMethods().getLoggerInstance();if(!L)L="error";(typeof L==="function"?L:V[L])(g)},E.reset=function(V){return C=null,Q=!1,z=[],J=!1,_=[],W=[],Y=[],q=vD(q,(w)=>!V[w]),E};let ND=[];return E.freeze=function(){ND.push({failMessage:C,failureOutput:Q,usages:z,usageDisabled:J,epilogs:_,examples:W,commands:Y,descriptions:q})},E.unfreeze=function(V=!1){let w=ND.pop();if(!w)return;if(V)q={...w.descriptions,...q},Y=[...w.commands,...Y],z=[...w.usages,...z],W=[...w.examples,...W],_=[...w.epilogs,..._];else({failMessage:C,failureOutput:Q,usages:z,usageDisabled:J,epilogs:_,examples:W,commands:Y,descriptions:q}=w)},E}function mF(D){return typeof D==="object"}function b8(D,F){return mF(D)?{text:D.text,indentation:D.indentation+F}:{text:D,indentation:F}}function n1(D){return mF(D)?D.indentation:0}function y0(D){return mF(D)?D.text:D}var t1=`###-begin-{{app_name}}-completions-###
30
30
  #
31
31
  # yargs command completion script
32
32
  #
@@ -82,15 +82,15 @@ else
82
82
  compdef _{{app_name}}_yargs_completions {{app_name}}
83
83
  fi
84
84
  ###-end-{{app_name}}-completions-###
85
- `;class r1{constructor(D,F,u,E){var B,C,$;this.yargs=D,this.usage=F,this.command=u,this.shim=E,this.completionKey="get-yargs-completions",this.aliases=null,this.customCompletionFunction=null,this.indexAfterLastReset=0,this.zshShell=($=((B=this.shim.getEnv("SHELL"))===null||B===void 0?void 0:B.includes("zsh"))||((C=this.shim.getEnv("ZSH_NAME"))===null||C===void 0?void 0:C.includes("zsh")))!==null&&$!==void 0?$:!1}defaultCompletion(D,F,u,E){let B=this.command.getCommandHandlers();for(let $=0,X=D.length;$<X;++$)if(B[D[$]]&&B[D[$]].builder){let Q=B[D[$]].builder;if(k0(Q)){this.indexAfterLastReset=$+1;let z=this.yargs.getInternalMethods().reset();return Q(z,!0),z.argv}}let C=[];this.commandCompletions(C,D,u),this.optionCompletions(C,D,F,u),this.choicesFromOptionsCompletions(C,D,F,u),this.choicesFromPositionalsCompletions(C,D,F,u),E(null,C)}commandCompletions(D,F,u){let 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B=this.yargs.getGroups()[this.usage.getPositionalGroupName()]||[],C=Math.max(this.indexAfterLastReset,this.yargs.getInternalMethods().getContext().commands.length+1),$=B[u._.length-C-1];if(!$)return;let X=this.yargs.getOptions().choices[$]||[];for(let Q of X)if(Q.startsWith(E))D.push(Q.replace(/:/g,"\\:"))}getPreviousArgChoices(D){if(D.length<1)return;let F=D[D.length-1],u="";if(!F.startsWith("-")&&D.length>1)u=F,F=D[D.length-2];if(!F.startsWith("-"))return;let E=F.replace(/^-+/,""),B=this.yargs.getOptions(),C=[E,...this.yargs.getAliases()[E]||[]],$;for(let X of C)if(Object.prototype.hasOwnProperty.call(B.key,X)&&Array.isArray(B.choices[X])){$=B.choices[X];break}if($)return $.filter((X)=>!u||X.startsWith(u))}previousArgHasChoices(D){let F=this.getPreviousArgChoices(D);return F!==void 0&&F.length>0}argsContainKey(D,F,u){let E=(B)=>D.indexOf((/^[^0-9]$/.test(B)?"-":"--")+B)!==-1;if(E(F))return!0;if(u&&E(`no-${F}`))return!0;if(this.aliases){for(let B of this.aliases[F])if(E(B))return!0}return!1}completeOptionKey(D,F,u,E){var B,C,$,X;let Q=D;if(this.zshShell){let W=this.usage.getDescriptions(),q=(C=(B=this===null||this===void 0?void 0:this.aliases)===null||B===void 0?void 0:B[D])===null||C===void 0?void 0:C.find((P)=>{let c=W[P];return typeof c==="string"&&c.length>0}),_=q?W[q]:void 0,H=(X=($=W[D])!==null&&$!==void 0?$:_)!==null&&X!==void 0?X:"";Q=`${D.replace(/:/g,"\\:")}:${H.replace("__yargsString__:","").replace(/(\r\n|\n|\r)/gm," ")}`}let z=(W)=>/^--/.test(W),J=(W)=>/^[^0-9]$/.test(W),O=!z(u)&&J(D)?"-":"--";if(F.push(O+Q),E)F.push(O+"no-"+Q)}customCompletion(D,F,u,E){if(OD(this.customCompletionFunction,null,this.shim),P8(this.customCompletionFunction)){let B=this.customCompletionFunction(u,F);if(s(B))return B.then((C)=>{this.shim.process.nextTick(()=>{E(null,C)})}).catch((C)=>{this.shim.process.nextTick(()=>{E(C,void 0)})});return E(null,B)}else if(S8(this.customCompletionFunction))return this.customCompletionFunction(u,F,(B=E)=>this.defaultCompletion(D,F,u,B),(B)=>{E(null,B)});else return this.customCompletionFunction(u,F,(B)=>{E(null,B)})}getCompletion(D,F){let u=D.length?D[D.length-1]:"",E=this.yargs.parse(D,!0),B=this.customCompletionFunction?(C)=>this.customCompletion(D,C,u,F):(C)=>this.defaultCompletion(D,C,u,F);return s(E)?E.then(B):B(E)}generateCompletionScript(D,F){let u=this.zshShell?s1:t1,E=this.shim.path.basename(D);if(D.match(/\.js$/))D=`./${D}`;return u=u.replace(/{{app_name}}/g,E),u=u.replace(/{{completion_command}}/g,F),u.replace(/{{app_path}}/g,D)}registerFunction(D){this.customCompletionFunction=D}setParsed(D){this.aliases=D.aliases}}function a1(D,F,u,E){return new r1(D,F,u,E)}function P8(D){return D.length<3}function S8(D){return D.length>3}function e1(D,F){if(D.length===0)return F.length;if(F.length===0)return D.length;let u=[],E;for(E=0;E<=F.length;E++)u[E]=[E];let B;for(B=0;B<=D.length;B++)u[0][B]=B;for(E=1;E<=F.length;E++)for(B=1;B<=D.length;B++)if(F.charAt(E-1)===D.charAt(B-1))u[E][B]=u[E-1][B-1];else if(E>1&&B>1&&F.charAt(E-2)===D.charAt(B-1)&&F.charAt(E-1)===D.charAt(B-2))u[E][B]=u[E-2][B-2]+1;else u[E][B]=Math.min(u[E-1][B-1]+1,Math.min(u[E][B-1]+1,u[E-1][B]+1));return u[F.length][D.length]}var D3=["$0","--","_"];function F3(D,F,u){let E=u.y18n.__,B=u.y18n.__n,C={};C.nonOptionCount=function(O){let W=D.getDemandedCommands(),_=O._.length+(O["--"]?O["--"].length:0)-D.getInternalMethods().getContext().commands.length;if(W._&&(_<W._.min||_>W._.max)){if(_<W._.min)if(W._.minMsg!==void 0)F.fail(W._.minMsg?W._.minMsg.replace(/\$0/g,_.toString()).replace(/\$1/,W._.min.toString()):null);else F.fail(B("Not enough non-option arguments: got %s, need at least %s","Not enough non-option arguments: got %s, need at least %s",_,_.toString(),W._.min.toString()));else if(_>W._.max)if(W._.maxMsg!==void 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85
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B;for(B=0;B<=D.length;B++)u[0][B]=B;for(E=1;E<=F.length;E++)for(B=1;B<=D.length;B++)if(F.charAt(E-1)===D.charAt(B-1))u[E][B]=u[E-1][B-1];else if(E>1&&B>1&&F.charAt(E-2)===D.charAt(B-1)&&F.charAt(E-1)===D.charAt(B-2))u[E][B]=u[E-2][B-2]+1;else u[E][B]=Math.min(u[E-1][B-1]+1,Math.min(u[E][B-1]+1,u[E-1][B]+1));return u[F.length][D.length]}var D3=["$0","--","_"];function F3(D,F,u){let E=u.y18n.__,B=u.y18n.__n,C={};C.nonOptionCount=function(W){let Y=D.getDemandedCommands(),_=W._.length+(W["--"]?W["--"].length:0)-D.getInternalMethods().getContext().commands.length;if(Y._&&(_<Y._.min||_>Y._.max)){if(_<Y._.min)if(Y._.minMsg!==void 0)F.fail(Y._.minMsg?Y._.minMsg.replace(/\$0/g,_.toString()).replace(/\$1/,Y._.min.toString()):null);else F.fail(B("Not enough non-option arguments: got %s, need at least %s","Not enough non-option arguments: got %s, need at least %s",_,_.toString(),Y._.min.toString()));else if(_>Y._.max)if(Y._.maxMsg!==void 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86
86
  ${_.join(`
87
- `)}`:"";F.fail(B("Missing required argument: %s","Missing required arguments: %s",Object.keys(q).length,Object.keys(q).join(", ")+H))}},C.unknownArguments=function(O,W,q,_,H=!0){var P;let c=D.getInternalMethods().getCommandInstance().getCommands(),p=[],QD=D.getInternalMethods().getContext();if(Object.keys(O).forEach((d)=>{if(!D3.includes(d)&&!Object.prototype.hasOwnProperty.call(q,d)&&!Object.prototype.hasOwnProperty.call(D.getInternalMethods().getParseContext(),d)&&!C.isValidAndSomeAliasIsNotNew(d,W))p.push(d)}),H&&(QD.commands.length>0||c.length>0||_))O._.slice(QD.commands.length).forEach((d)=>{if(!c.includes(""+d))p.push(""+d)});if(H){let U=((P=D.getDemandedCommands()._)===null||P===void 0?void 0:P.max)||0,j=QD.commands.length+U;if(j<O._.length)O._.slice(j).forEach((S)=>{if(S=String(S),!QD.commands.includes(S)&&!p.includes(S))p.push(S)})}if(p.length)F.fail(B("Unknown argument: %s","Unknown arguments: %s",p.length,p.map((d)=>d.trim()?d:`"${d}"`).join(", ")))},C.unknownCommands=function(O){let W=D.getInternalMethods().getCommandInstance().getCommands(),q=[],_=D.getInternalMethods().getContext();if(_.commands.length>0||W.length>0)O._.slice(_.commands.length).forEach((H)=>{if(!W.includes(""+H))q.push(""+H)});if(q.length>0)return F.fail(B("Unknown command: %s","Unknown commands: %s",q.length,q.join(", "))),!0;else return!1},C.isValidAndSomeAliasIsNotNew=function(O,W){if(!Object.prototype.hasOwnProperty.call(W,O))return!1;let q=D.parsed.newAliases;return[O,...W[O]].some((_)=>!Object.prototype.hasOwnProperty.call(q,_)||!q[O])},C.limitedChoices=function(O){let W=D.getOptions(),q={};if(!Object.keys(W.choices).length)return;Object.keys(O).forEach((P)=>{if(D3.indexOf(P)===-1&&Object.prototype.hasOwnProperty.call(W.choices,P))[].concat(O[P]).forEach((c)=>{if(W.choices[P].indexOf(c)===-1&&c!==void 0)q[P]=(q[P]||[]).concat(c)})});let _=Object.keys(q);if(!_.length)return;let H=E("Invalid values:");_.forEach((P)=>{H+=`
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- ${E("Argument: %s, Given: %s, Choices: %s",P,F.stringifiedValues(q[P]),F.stringifiedValues(W.choices[P]))}`}),F.fail(H)};let $={};C.implies=function(O,W){if(N("<string|object> [array|number|string]",[O,W],arguments.length),typeof O==="object")Object.keys(O).forEach((q)=>{C.implies(q,O[q])});else{if(D.global(O),!$[O])$[O]=[];if(Array.isArray(W))W.forEach((q)=>C.implies(O,q));else OD(W,void 0,u),$[O].push(W)}},C.getImplied=function(){return $};function X(J,O){let W=Number(O);if(O=isNaN(W)?O:W,typeof O==="number")O=J._.length>=O;else if(O.match(/^--no-.+/))O=O.match(/^--no-(.+)/)[1],O=!Object.prototype.hasOwnProperty.call(J,O);else O=Object.prototype.hasOwnProperty.call(J,O);return O}C.implications=function(O){let W=[];if(Object.keys($).forEach((q)=>{let _=q;($[q]||[]).forEach((H)=>{let P=_,c=H;if(P=X(O,P),H=X(O,H),P&&!H)W.push(` ${_} -> ${c}`)})}),W.length){let q=`${E("Implications failed:")}
89
- `;W.forEach((_)=>{q+=_}),F.fail(q)}};let Q={};C.conflicts=function(O,W){if(N("<string|object> [array|string]",[O,W],arguments.length),typeof O==="object")Object.keys(O).forEach((q)=>{C.conflicts(q,O[q])});else{if(D.global(O),!Q[O])Q[O]=[];if(Array.isArray(W))W.forEach((q)=>C.conflicts(O,q));else Q[O].push(W)}},C.getConflicting=()=>Q,C.conflicting=function(O){if(Object.keys(O).forEach((W)=>{if(Q[W])Q[W].forEach((q)=>{if(q&&O[W]!==void 0&&O[q]!==void 0)F.fail(E("Arguments %s and %s are mutually exclusive",W,q))})}),D.getInternalMethods().getParserConfiguration()["strip-dashed"])Object.keys(Q).forEach((W)=>{Q[W].forEach((q)=>{if(q&&O[u.Parser.camelCase(W)]!==void 0&&O[u.Parser.camelCase(q)]!==void 0)F.fail(E("Arguments %s and %s are mutually exclusive",W,q))})})},C.recommendCommands=function(O,W){W=W.sort((P,c)=>c.length-P.length);let _=null,H=1/0;for(let P=0,c;(c=W[P])!==void 0;P++){let p=e1(O,c);if(p<=3&&p<H)H=p,_=c}if(_)F.fail(E("Did you mean %s?",_))},C.reset=function(O){return 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C.dependencies=Iu(C.dependencies),C.dependencies=C.dependencies.filter((X)=>X.url!==E.url),C}catch(E){return console.warn(`Failed to transform extension ${D.name}: ${E}`),null}}function xu(D,F,u,E){let B=[];if(F)B.push(F);if(u)B.push(...$6(u));if(E)B.push(...f2(E));let C={};for(let X of B){if(X.url===D.url)continue;C[X.url]=X}let $=Object.values(C).sort((X,Q)=>X.name.localeCompare(Q.name));return $.length>0?$:void 0}async function Pu(D,F){let u=wD(F),E;if(F.base&&F.type!=="Element"){let z=D.resolveFs(D.ensureCanonicalUrl(F.base));E=wD(z)}let B=await JF(D,F,[],F.elements),C=await v2(F,D,F.package_meta),$=xu(u,E,B,C),X={identifier:u,base:E,fields:B,nested:C,description:F.description,dependencies:$},Q=await S2(F,D);return[X,...Q]}async function X6(D,F){let u=[],E=wD(F);if(E.kind==="profile"){let B=await D6(D,F);u.push(B);let C=await S2(F,D);return u.push(...C),u}if(E.kind==="value-set"||F.kind==="value-set"){let B=await wu(F,D,F.package_meta);if(B)u.push(B);return u}if(Tu(F,E)){let B=await bu(F,D,F.package_meta);if(B)u.push(B);return u}return await Pu(D,F)}async function Su(D,F){try{let u=await F.resolve(D);if(!u||u.resourceType!=="CodeSystem")return;let E=[],B=(C,$)=>{for(let X of C)if(E.push({system:$,code:X.code,display:X.display}),X.concept)B(X.concept,$)};if(u.concept)B(u.concept,D);return E}catch{return}}async function Z6(D,F){let u=[];if(D.concept){for(let E of D.concept)u.push({system:D.system,code:E.code,display:E.display});return u}if(D.system&&!D.filter){let E=await Su(D.system,F);if(E)u.push(...E)}if(D.valueSet)for(let E of D.valueSet)try{let B=await F.resolve(E);if(B){let C=await Q6(B,F);if(C)u.push(...C)}}catch{}return u}async function Q6(D,F){try{let u=[];if(D.compose){if(D.compose.include)for(let E of D.compose.include){let B=await Z6(E,F);u.push(...B)}if(D.compose.exclude){let E=new Set;for(let B of D.compose.exclude){let C=await Z6(B,F);for(let $ of C)E.add(`${$.system}|${$.code}`)}return u.filter((B)=>!E.has(`${B.system}|${B.code}`))}}return u.length>0?u:void 0}catch(u){console.error("Error extracting ValueSet concepts:",u);return}}async function z6(D,F,u){let B={identifier:I0(D.url,D,u)};if(D.description)B.description=D.description;let C=await Q6(D,F);if(C&&C.length>0)B.concept=C;else if(D.compose)B.compose=D.compose;if(D.compose){let $=[],X=(Q)=>{for(let z of Q){if(z.system)$.push({kind:"value-set",package:u?.name||"undefined",version:u?.version||"undefined",name:z.system.split("/").pop()||"unknown",url:z.system});if(z.valueSet)for(let J of z.valueSet)$.push(I0(J,void 0,u))}};if(D.compose.include)X(D.compose.include);if(D.compose.exclude)X(D.compose.exclude)}return B}class gD{manager;options;cacheConfig;cache;logger;constructor(D={},F){this.options={verbose:!1,...D},this.manager=D.manager||pD({packages:[],workingDir:"tmp/fhir"}),this.cacheConfig=F,this.logger=D.logger||jD({verbose:this.options.verbose,prefix:"TypeSchema"})}async initializeCache(){if(this.cacheConfig&&!this.cache)this.cache=new $0(this.cacheConfig),await this.cache.initialize()}async registerFromPackageMetas(D){let F=D.map((u)=>`${u.name}${u.version}`);return this.logger.step(`Loading FHIR packages: ${F.join(", ")}`),await this.manager.init(),e3(this.manager)}generateFhirSchemas(D){this.logger.progress(`Converting ${D.length} StructureDefinitions to FHIRSchemas`);let F=this.applyStructureDefinitionTreeshaking(D),u=[],E=0,B=0;for(let C of F)try{let $=L0(C);u.push($),E++,this.logger.debug(`Converted StructureDefinition: ${C.name||C.id} (${C.resourceType})`)}catch($){B++,this.logger.warn(`Failed to convert StructureDefinition ${C.name||C.id}: ${$ instanceof Error?$.message:String($)}`)}return this.logger.success(`FHIR Schema conversion completed: ${E}/${F.length} successful, ${B} failed`),u}async generateValueSetSchemas(D,F){if(D.length>0)this.logger.debug(`${D.length} ValueSets available for enum extraction`);let u=[];if(D.length>0){this.logger.progress(`Converting ${D.length} ValueSets to TypeSchema`);let E=0,B=0;for(let C of D)try{let $=await z6(C,this.manager,F);if($)u.push($),E++,this.logger.debug(`Converted ValueSet: ${C.name||C.id}`)}catch($){B++,this.logger.warn(`Failed to convert ValueSet ${C.name||C.id}: ${$ instanceof Error?$.message:String($)}`)}this.logger.success(`ValueSet conversion completed: ${E}/${D.length} successful, ${B} failed`)}return u}async generateFromPackage(D,F){if(await this.initializeCache(),this.cache&&!(this.cacheConfig?.forceRegenerate??!1)){let C=this.cache.getByPackage(D);if(C.length>0)return this.logger.info(`Using cached TypeSchemas for package: ${D} (${C.length} schemas)`),C}let u={name:D,version:F||"latest"},E=await this.registerFromPackageMetas([u]),B=[...(await Promise.all(E.allFs().map(async(C)=>await X6(E,C)))).flat(),...await this.generateValueSetSchemas(E.allVs(),u)];if(this.cache)for(let C of B)await this.cache.set(C);return B}applyStructureDefinitionTreeshaking(D){let F=this.options.treeshake;if(!F||F.length===0)return D;this.logger.info(`Applying treeshaking filter for ResourceTypes: ${F.join(", ")}`);let u=new Map,E=new Map,B=new Map;for(let z of D){let J=z.name||z.id;if(J)u.set(J,z),E.set(J,new Set),B.set(J,new Set)}for(let z of D){let J=z.name||z.id;if(!J)continue;let{realDeps:W,refTargets:Y}=this.extractStructureDefinitionDependenciesWithReferences(z);E.set(J,new Set(W)),B.set(J,new Set(Y))}let C=new Set;for(let z of F)if(u.has(z))C.add(z);else this.logger.warn(`ResourceType '${z}' not found in structure definitions`);let $=(z,J=new Set)=>{if(J.has(z)||!E.has(z))return;J.add(z);let W=E.get(z)||new Set;for(let Y of Array.from(W))if(u.has(Y))C.add(Y),$(Y,J)};for(let z of Array.from(C))$(z);let X=D.filter((z)=>{let J=z.name||z.id;return J&&C.has(J)}),Q=new Set;for(let z of D){let J=z.name||z.id;if(J&&!C.has(J)){if(Array.from(B.values()).some((Y)=>Y.has(J)))Q.add(J)}}if(Q.size>0)this.logger.info(`Excluded reference-only targets: ${Array.from(Q).join(", ")}`);return this.logger.success(`Treeshaking completed: kept ${X.length}/${D.length} structure definitions`),X}extractStructureDefinitionDependenciesWithReferences(D){let F=new Set,u=new Set;if(D.baseDefinition){let E=this.extractResourceNameFromUrl(D.baseDefinition);if(E)F.add(E)}if(D.snapshot?.element||D.differential?.element){let E=D.snapshot?.element||D.differential?.element;for(let B of E)if(B.type)for(let C of B.type){if(C.code){if(F.add(C.code),C.code==="Reference"&&C.targetProfile)for(let $ of C.targetProfile){let X=this.extractResourceNameFromUrl($);if(X)u.add(X)}}if(C.profile)for(let $ of C.profile){let X=this.extractResourceNameFromUrl($);if(X)F.add(X)}}}return{realDeps:Array.from(F),refTargets:Array.from(u)}}extractResourceNameFromUrl(D){let F=D.match(/\/([^/]+)$/);return F?F[1]??null:null}}import{readFile as vu}from"node:fs/promises";class w0{options;constructor(D={}){this.options={format:"auto",validate:!0,strict:!1,...D}}async parseFromFile(D){let F=await vu(D,"utf-8"),u=this.options.format==="auto"?this.detectFormat(F,D):this.options.format;return this.parseFromString(F,u)}async parseFromString(D,F){let u=F||this.detectFormat(D),E;if(u==="ndjson")E=this.parseNDJSON(D);else E=this.parseJSON(D);if(this.options.validate)this.validateSchemas(E);return E}async parseFromFiles(D){let F=[];for(let u of D){let E=await this.parseFromFile(u);F.push(...E)}return F}parseSchema(D){if(!D.identifier)throw Error("TypeSchema must have an identifier");if(!this.isValidIdentifier(D.identifier))throw Error("TypeSchema identifier is invalid");return D}findByIdentifier(D,F){return D.filter((u)=>this.matchesIdentifier(u.identifier,F))}findByUrl(D,F){return D.find((u)=>u.identifier.url===F)}findByKind(D,F){return D.filter((u)=>u.identifier.kind===F)}findByPackage(D,F){return D.filter((u)=>u.identifier.package===F)}detectFormat(D,F){if(F){if(F.endsWith(".ndjson"))return"ndjson";if(F.endsWith(".json"))return"json"}let u=D.trim();if(u.includes(`
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  `)){let E=u.split(`
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  `).filter((B)=>B.trim());if(E.length>1)try{if(E[0])JSON.parse(E[0]);return"ndjson"}catch{}}return"json"}parseNDJSON(D){let F=[],u=D.split(`
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  `).filter((E)=>E.trim());for(let E of u)try{let B=JSON.parse(E);F.push(this.parseSchema(B))}catch(B){if(this.options.strict)throw Error(`Failed to parse NDJSON line: ${B}`)}return F}parseJSON(D){try{let F=JSON.parse(D);if(Array.isArray(F))return F.map((u)=>this.parseSchema(u));else return[this.parseSchema(F)]}catch(F){throw Error(`Failed to parse JSON: ${F}`)}}validateSchemas(D){for(let F of D){if(!F.identifier)throw Error("Schema missing identifier");if(!this.isValidIdentifier(F.identifier))throw Error(`Invalid identifier in schema: ${JSON.stringify(F.identifier)}`)}}isValidIdentifier(D){return typeof D==="object"&&D!==null&&typeof D.kind==="string"&&typeof D.package==="string"&&typeof D.version==="string"&&typeof D.name==="string"&&typeof D.url==="string"}matchesIdentifier(D,F){return(!F.kind||D.kind===F.kind)&&(!F.package||D.package===F.package)&&(!F.version||D.version===F.version)&&(!F.name||D.name===F.name)&&(!F.url||D.url===F.url)}}b0();class d2{options;constructor(D){this.options=D}handleError(D,F){if(D instanceof LD)this.handleGeneratorError(D,F);else this.handleUnknownError(D,F)}handleBatchErrors(D){let F=D.filter((E)=>E instanceof LD),u=D.filter((E)=>!(E instanceof LD));if(F.length>0)this.reportBatchErrors(F);u.forEach((E)=>{this.handleUnknownError(E)})}handleGeneratorError(D,F){switch(this.options.outputFormat){case"json":this.reportErrorAsJson(D);break;case"structured":this.reportErrorStructured(D);break;default:this.reportErrorToConsole(D)}}handleUnknownError(D,F){if(this.options.logger.error("Unexpected error occurred:",D),this.options.verbose){if(console.error(`
@@ -136,8 +136,8 @@ export default defineConfig({
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  typescript: {
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  generateIndex: true
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  }
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- });`),process.exit(1)}let E=await MF(F),B=D.verbose??E.verbose??!1,C=jD({verbose:B,prefix:"Generate"});try{if(B2("Starting generation from config"),B)C.info(`Config file: ${u}`),C.info(`Output directory: ${E.outputDir||"./generated"}`),C.info(`Packages: ${E.packages?.length||0}`),C.info(`Files: ${E.files?.length||0}`),C.info(`TypeScript generation: ${E.typescript?"enabled":"disabled"}`);let $=new qF({outputDir:E.outputDir||"./generated",verbose:B,overwrite:E.overwrite??!0,validate:E.validate??!0,cache:E.cache??!0,typeSchemaConfig:E.typeSchema,logger:C});if(E.packages&&E.packages.length>0){C.info(`Loading packages from config: ${E.packages.join(", ")}`);for(let Q of E.packages){let[z,J]=Q.includes("@")?Q.split("@"):[Q,void 0];$.fromPackage(z,J)}}else if(E.files&&E.files.length>0){C.info(`Loading files from config: ${E.files.join(", ")}`);for(let Q of E.files)$.fromFiles(Q)}else throw Error("No data source specified in config. Please configure 'packages' or 'files' in your config file.");if(E.typescript){if(B)C.info("Configuring TypeScript generation from config"),C.debug(`Module format: ${E.typescript.moduleFormat||"esm"}`),C.debug(`Generate index: ${E.typescript.generateIndex??!0}`),C.debug(`Include docs: ${E.typescript.includeDocuments??!1}`),C.debug(`Naming convention: ${E.typescript.namingConvention||"PascalCase"}`);$.typescript(E.typescript)}if(!E.typescript)throw Error("No generators configured. Please enable 'typescript' in your config file.");if(B)$.onProgress((Q,z,J,O)=>{let W=Math.round(z/J*100);C.progress(`[${Q}] ${W}% - ${O||"Processing..."}`)});C.step("Executing generation...");let X=await $.generate();if(X.success){if(r0(`Generated ${X.filesGenerated.length} files in ${X.duration.toFixed(2)}ms`),C.dim(`Output directory: ${X.outputDir}`),X.warnings.length>0)for(let Q of X.warnings)E2(Q)}else{VD(`Generation failed with ${X.errors.length} errors`);for(let Q of X.errors)C.dim(` ${Q}`);process.exit(1)}}catch($){VD("Generation failed with unexpected error",$ instanceof Error?$:Error(String($))),process.exit(1)}}};async function iu(D){for(let F of _F){let u=nu(D,F);if(ou(u))return u}return null}import{mkdir as tu,writeFile as su}from"node:fs/promises";import{dirname as ru}from"node:path";var U6={command:"generate <packages..>",describe:"Generate TypeSchema files from FHIR packages",builder:{packages:{type:"string",array:!0,demandOption:!0,describe:"FHIR packages to process (e.g., hl7.fhir.r4.core@4.0.1)"},output:{alias:"o",type:"string",describe:"Output file or directory",default:"./schemas.ndjson"},format:{alias:"f",type:"string",choices:["ndjson","json"],default:"ndjson",describe:"Output format for TypeSchema files"},treeshake:{alias:"t",type:"string",array:!0,describe:"Only generate TypeSchemas for specific ResourceTypes (treeshaking)"},singleFile:{alias:"s",type:"boolean",default:!1,describe:"Generate single TypeSchema file instead of multiple files (NDJSON format)"},verbose:{alias:"v",type:"boolean",default:!1,describe:"Enable verbose output"}},handler:async(D)=>{let F=jD({verbose:D.verbose,prefix:"TypeSchema"});try{let u=await MF(process.cwd());F.step("Generating TypeSchema from FHIR packages"),F.info(`Packages: ${D.packages.join(", ")}`),F.info(`Output: ${D.output}`);let E=D.singleFile!==void 0?D.singleFile:u.typeSchema?.singleFile??!1,B=E?"ndjson":D.format;F.debug(`Format: ${B}${E&&D.format==="json"?" (forced from json due to singleFile)":""}`);let C=D.treeshake&&D.treeshake.length>0?D.treeshake:u.typeSchema?.treeshake;if(C&&C.length>0)F.info(`Treeshaking enabled for ResourceTypes: ${C.join(", ")}`);if(E)F.info("Single file output enabled (NDJSON format)");let $=Date.now(),X=new gD({verbose:D.verbose,treeshake:C}),Q=[];for(let W of D.packages){let[q,_]=W.includes("@")?W.split("@"):[W,void 0];F.progress(`Processing package: ${q}${_?`@${_}`:""}`);let H=await X.generateFromPackage(q,_);Q.push(...H)}if(Q.length===0)throw Error("No schemas were generated from the specified packages");let z=D.output;await tu(ru(z),{recursive:!0});let J;if(B==="json")J=JSON.stringify(Q,null,2);else J=Q.map((W)=>JSON.stringify(W)).join(`
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- `);await su(z,J,"utf-8");let O=Date.now()-$;if(X2(`Generated ${Q.length} TypeSchema definitions`,O,{schemas:Q.length}),F.dim(`Output: ${z}`),D.verbose){F.debug("Generated schemas:");let W=Q.map((q)=>`${q.identifier?.name||"Unknown"} (${q.identifier?.kind||"unknown"})`);C0(W)}}catch(u){F.error("Failed to generate TypeSchema",u instanceof Error?u:Error(String(u))),process.exit(1)}}};var j6={command:"typeschema [subcommand]",describe:"TypeSchema operations - generate, validate and merge schemas",builder:(D)=>{return D.command(U6).help().example("$0 typeschema generate hl7.fhir.r4.core@4.0.1","Generate TypeSchema from FHIR R4 core package")},handler:(D)=>{if(!D.subcommand&&D._.length===1){a0("Available typeschema subcommands:"),C0(["generate Generate TypeSchema files from FHIR packages"]),console.log(`
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+ });`),process.exit(1)}let E=await MF(F),B=D.verbose??E.verbose??!1,C=jD({verbose:B,prefix:"Generate"});try{if(B2("Starting generation from config"),B)C.info(`Config file: ${u}`),C.info(`Output directory: ${E.outputDir||"./generated"}`),C.info(`Packages: ${E.packages?.length||0}`),C.info(`Files: ${E.files?.length||0}`),C.info(`TypeScript generation: ${E.typescript?"enabled":"disabled"}`);let $=new qF({outputDir:E.outputDir||"./generated",verbose:B,overwrite:E.overwrite??!0,validate:E.validate??!0,cache:E.cache??!0,typeSchemaConfig:E.typeSchema,logger:C});if(E.packages&&E.packages.length>0){C.info(`Loading packages from config: ${E.packages.join(", ")}`);for(let Q of E.packages){let[z,J]=Q.includes("@")?Q.split("@"):[Q,void 0];$.fromPackage(z,J)}}else if(E.files&&E.files.length>0){C.info(`Loading files from config: ${E.files.join(", ")}`);for(let Q of E.files)$.fromFiles(Q)}else throw Error("No data source specified in config. Please configure 'packages' or 'files' in your config file.");if(E.typescript){if(B)C.info("Configuring TypeScript generation from config"),C.debug(`Module format: ${E.typescript.moduleFormat||"esm"}`),C.debug(`Generate index: ${E.typescript.generateIndex??!0}`),C.debug(`Include docs: ${E.typescript.includeDocuments??!1}`),C.debug(`Naming convention: ${E.typescript.namingConvention||"PascalCase"}`);$.typescript(E.typescript)}if(!E.typescript)throw Error("No generators configured. Please enable 'typescript' in your config file.");if(B)$.onProgress((Q,z,J,W)=>{let Y=Math.round(z/J*100);C.progress(`[${Q}] ${Y}% - ${W||"Processing..."}`)});C.step("Executing generation...");let X=await $.generate();if(X.success){if(r0(`Generated ${X.filesGenerated.length} files in ${X.duration.toFixed(2)}ms`),C.dim(`Output directory: ${X.outputDir}`),X.warnings.length>0)for(let Q of X.warnings)E2(Q)}else{VD(`Generation failed with ${X.errors.length} errors`);for(let Q of X.errors)C.dim(` ${Q}`);process.exit(1)}}catch($){VD("Generation failed with unexpected error",$ instanceof Error?$:Error(String($))),process.exit(1)}}};async function iu(D){for(let F of _F){let u=nu(D,F);if(ou(u))return u}return null}import{mkdir as tu,writeFile as su}from"node:fs/promises";import{dirname as ru}from"node:path";var U6={command:"generate <packages..>",describe:"Generate TypeSchema files from FHIR packages",builder:{packages:{type:"string",array:!0,demandOption:!0,describe:"FHIR packages to process (e.g., hl7.fhir.r4.core@4.0.1)"},output:{alias:"o",type:"string",describe:"Output file or directory",default:"./schemas.ndjson"},format:{alias:"f",type:"string",choices:["ndjson","json"],default:"ndjson",describe:"Output format for TypeSchema files"},treeshake:{alias:"t",type:"string",array:!0,describe:"Only generate TypeSchemas for specific ResourceTypes (treeshaking)"},singleFile:{alias:"s",type:"boolean",default:!1,describe:"Generate single TypeSchema file instead of multiple files (NDJSON format)"},verbose:{alias:"v",type:"boolean",default:!1,describe:"Enable verbose output"}},handler:async(D)=>{let F=jD({verbose:D.verbose,prefix:"TypeSchema"});try{let u=await MF(process.cwd());F.step("Generating TypeSchema from FHIR packages"),F.info(`Packages: ${D.packages.join(", ")}`),F.info(`Output: ${D.output}`);let E=D.singleFile!==void 0?D.singleFile:u.typeSchema?.singleFile??!1,B=E?"ndjson":D.format;F.debug(`Format: ${B}${E&&D.format==="json"?" (forced from json due to singleFile)":""}`);let C=D.treeshake&&D.treeshake.length>0?D.treeshake:u.typeSchema?.treeshake;if(C&&C.length>0)F.info(`Treeshaking enabled for ResourceTypes: ${C.join(", ")}`);if(E)F.info("Single file output enabled (NDJSON format)");let $=Date.now(),X=new gD({verbose:D.verbose,treeshake:C}),Q=[];for(let Y of D.packages){let[q,_]=Y.includes("@")?Y.split("@"):[Y,void 0];F.progress(`Processing package: ${q}${_?`@${_}`:""}`);let H=await X.generateFromPackage(q,_);Q.push(...H)}if(Q.length===0)throw Error("No schemas were generated from the specified packages");let z=D.output;await tu(ru(z),{recursive:!0});let J;if(B==="json")J=JSON.stringify(Q,null,2);else J=Q.map((Y)=>JSON.stringify(Y)).join(`
140
+ `);await su(z,J,"utf-8");let W=Date.now()-$;if(X2(`Generated ${Q.length} TypeSchema definitions`,W,{schemas:Q.length}),F.dim(`Output: ${z}`),D.verbose){F.debug("Generated schemas:");let Y=Q.map((q)=>`${q.identifier?.name||"Unknown"} (${q.identifier?.kind||"unknown"})`);C0(Y)}}catch(u){F.error("Failed to generate TypeSchema",u instanceof Error?u:Error(String(u))),process.exit(1)}}};var j6={command:"typeschema [subcommand]",describe:"TypeSchema operations - generate, validate and merge schemas",builder:(D)=>{return D.command(U6).help().example("$0 typeschema generate hl7.fhir.r4.core@4.0.1","Generate TypeSchema from FHIR R4 core package")},handler:(D)=>{if(!D.subcommand&&D._.length===1){a0("Available typeschema subcommands:"),C0(["generate Generate TypeSchema files from FHIR packages"]),console.log(`
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  Use 'atomic-codegen typeschema <subcommand> --help' for more information about a subcommand.`),console.log(`
142
142
  Examples:`),C0(["atomic-codegen typeschema generate hl7.fhir.r4.core@4.0.1 -o schemas.ndjson","atomic-codegen typeschema validate schemas.ndjson","atomic-codegen typeschema merge schema1.ndjson schema2.ndjson -o merged.ndjson"]);return}if(D.subcommand&&!["generate","validate","merge"].includes(D.subcommand))VD(`Unknown typeschema subcommand: ${D.subcommand}
143
143
  `),a0("Available typeschema subcommands:"),C0(["generate Generate TypeSchema files from FHIR packages","validate Validate TypeSchema files for correctness and consistency","merge Merge multiple TypeSchema files into a single file"]),console.log(`
package/dist/typeschema/core/field-builder.js CHANGED
@@ -126,7 +126,7 @@ export const buildReferences = (element, register, _packageInfo) => {
126
126
  return undefined;
127
127
  return element.refers.map((ref) => {
128
128
  const curl = register.ensureCanonicalUrl(ref);
129
- const fs = register.resolveFS(curl);
129
+ const fs = register.resolveFs(curl);
130
130
  return mkIdentifier(fs);
131
131
  });
132
132
  };
package/dist/typeschema/core/transformer.d.ts CHANGED
@@ -6,6 +6,5 @@
6
6
  import type { FHIRSchemaElement } from "@atomic-ehr/fhirschema";
7
7
  import type { Register } from "@typeschema/register";
8
8
  import type { RichFHIRSchema, TypeSchema, TypeSchemaField } from "@typeschema/types";
9
- import type { PackageMeta } from "../types";
10
- export declare function transformElements(fhirSchema: RichFHIRSchema, parentPath: string[], elements: Record<string, FHIRSchemaElement> | undefined, register: Register, packageInfo?: PackageMeta): Promise<Record<string, TypeSchemaField> | undefined>;
9
+ export declare function transformElements(register: Register, fhirSchema: RichFHIRSchema, parentPath: string[], elements: Record<string, FHIRSchemaElement> | undefined): Promise<Record<string, TypeSchemaField> | undefined>;
11
10
  export declare function transformFHIRSchema(register: Register, fhirSchema: RichFHIRSchema): Promise<TypeSchema[]>;
package/dist/typeschema/core/transformer.js CHANGED
@@ -8,22 +8,19 @@ import { collectBindingSchemas } from "./binding";
8
8
  import { buildField, getElementHierarchy, isNestedElement, mergeElementHierarchy, mkNestedField, } from "./field-builder";
9
9
  import { mkIdentifier } from "./identifier";
10
10
  import { buildNestedTypes, extractNestedDependencies } from "./nested-types";
11
- export async function transformElements(fhirSchema, parentPath, elements, register, packageInfo) {
12
- const fields = {};
11
+ export async function transformElements(register, fhirSchema, parentPath, elements) {
13
12
  if (!elements)
14
13
  return undefined;
14
+ const fields = {};
15
15
  for (const [key, element] of Object.entries(elements)) {
16
16
  const path = [...parentPath, key];
17
- // Get element snapshot from hierarchy
18
17
  const hierarchy = getElementHierarchy(fhirSchema, path, register);
19
18
  const snapshot = hierarchy.length > 0 ? mergeElementHierarchy(hierarchy) : element;
20
19
  if (isNestedElement(snapshot)) {
21
- // Reference to nested type
22
- fields[key] = mkNestedField(fhirSchema, path, snapshot, register, packageInfo);
20
+ fields[key] = mkNestedField(fhirSchema, path, snapshot, register, fhirSchema.package_meta);
23
21
  }
24
22
  else {
25
- // Regular field
26
- fields[key] = await buildField(fhirSchema, path, snapshot, register, packageInfo);
23
+ fields[key] = buildField(fhirSchema, path, snapshot, register, fhirSchema.package_meta);
27
24
  }
28
25
  }
29
26
  return fields;
@@ -159,7 +156,7 @@ async function transformExtension(fhirSchema, register, packageInfo) {
159
156
  }
160
157
  // Transform elements into fields if present
161
158
  if (fhirSchema.elements) {
162
- const fields = await transformElements(fhirSchema, [], fhirSchema.elements, register, packageInfo);
159
+ const fields = await transformElements(register, fhirSchema, [], fhirSchema.elements);
163
160
  if (fields && Object.keys(fields).length > 0) {
164
161
  extensionSchema.fields = fields;
165
162
  extensionSchema.dependencies.push(...extractFieldDependencies(fields));
@@ -203,33 +200,29 @@ async function transformResource(register, fhirSchema) {
203
200
  const identifier = mkIdentifier(fhirSchema);
204
201
  let base;
205
202
  if (fhirSchema.base && fhirSchema.type !== "Element") {
206
- const curl = register.ensureCanonicalUrl(fhirSchema.base);
207
- const baseFS = register.resolveFS(curl);
208
- base = mkIdentifier(baseFS);
203
+ const baseFs = register.resolveFs(register.ensureCanonicalUrl(fhirSchema.base));
204
+ base = mkIdentifier(baseFs);
209
205
  }
210
- const fields = await transformElements(fhirSchema, [], fhirSchema.elements, register, fhirSchema.package_meta);
206
+ const fields = await transformElements(register, fhirSchema, [], fhirSchema.elements);
211
207
  const nested = await buildNestedTypes(fhirSchema, register, fhirSchema.package_meta);
212
208
  const dependencies = extractDependencies(identifier, base, fields, nested);
213
- const results = [
214
- {
215
- identifier,
216
- base,
217
- fields,
218
- nested,
219
- description: fhirSchema.description,
220
- dependencies,
221
- },
222
- ];
209
+ const typeSchema = {
210
+ identifier,
211
+ base,
212
+ fields,
213
+ nested,
214
+ description: fhirSchema.description,
215
+ dependencies,
216
+ };
223
217
  const bindingSchemas = await collectBindingSchemas(fhirSchema, register);
224
- results.push(...bindingSchemas);
225
- return results;
218
+ return [typeSchema, ...bindingSchemas];
226
219
  }
227
220
  export async function transformFHIRSchema(register, fhirSchema) {
228
221
  const results = [];
229
222
  const identifier = mkIdentifier(fhirSchema);
230
223
  // Handle profiles with specialized processor
231
224
  if (identifier.kind === "profile") {
232
- const profileSchema = await transformProfile(fhirSchema, register);
225
+ const profileSchema = await transformProfile(register, fhirSchema);
233
226
  results.push(profileSchema);
234
227
  // Collect binding schemas for profiles too
235
228
  const bindingSchemas = await collectBindingSchemas(fhirSchema, register);
package/dist/typeschema/generator.js CHANGED
@@ -111,8 +111,8 @@ export class TypeSchemaGenerator {
111
111
  };
112
112
  const register = await this.registerFromPackageMetas([packageInfo]);
113
113
  const allSchemas = [
114
- ...(await Promise.all(register.allFS().map(async (fs) => await transformFHIRSchema(register, fs)))).flat(),
115
- ...(await this.generateValueSetSchemas(register.allVS(), packageInfo)),
114
+ ...(await Promise.all(register.allFs().map(async (fs) => await transformFHIRSchema(register, fs)))).flat(),
115
+ ...(await this.generateValueSetSchemas(register.allVs(), packageInfo)),
116
116
  ];
117
117
  if (this.cache) {
118
118
  for (const schema of allSchemas) {
package/dist/typeschema/profile/processor.d.ts CHANGED
@@ -11,4 +11,4 @@ import type { TypeSchemaForProfile } from "../types";
11
11
  * Transform a FHIR profile to TypeSchema format
12
12
  * Profiles are treated as specialized resources that extend base resources
13
13
  */
14
- export declare function transformProfile(fhirSchema: RichFHIRSchema, register: Register): Promise<TypeSchemaForProfile>;
14
+ export declare function transformProfile(register: Register, fhirSchema: RichFHIRSchema): Promise<TypeSchemaForProfile>;
package/dist/typeschema/profile/processor.js CHANGED
@@ -10,7 +10,7 @@ import { transformElements } from "../core/transformer";
10
10
  * Transform a FHIR profile to TypeSchema format
11
11
  * Profiles are treated as specialized resources that extend base resources
12
12
  */
13
- export async function transformProfile(fhirSchema, register) {
13
+ export async function transformProfile(register, fhirSchema) {
14
14
  // Build profile identifier
15
15
  const identifier = mkIdentifier(fhirSchema);
16
16
  const packageInfo = fhirSchema.package_meta;
@@ -54,7 +54,7 @@ export async function transformProfile(fhirSchema, register) {
54
54
  }
55
55
  // Process profile fields from differential elements
56
56
  if (fhirSchema.elements) {
57
- const fields = await transformElements(fhirSchema, [], fhirSchema.elements, register, packageInfo);
57
+ const fields = await transformElements(register, fhirSchema, [], fhirSchema.elements);
58
58
  if (fields && Object.keys(fields).length > 0) {
59
59
  profileSchema.fields = fields;
60
60
  }
package/dist/typeschema/register.d.ts CHANGED
@@ -3,13 +3,14 @@ import type { FHIRSchema, StructureDefinition } from "@atomic-ehr/fhirschema";
3
3
  import type { CodegenLogger } from "@root/utils/codegen-logger";
4
4
  import { type PackageMeta, type RichFHIRSchema } from "@typeschema/types";
5
5
  export type Register = {
6
- appendFS(fs: FHIRSchema): void;
6
+ appendFs(fs: FHIRSchema): void;
7
7
  ensureCanonicalUrl(canonicalUrl: string): string;
8
- resolveSD(canonicalUrl: string): StructureDefinition | undefined;
9
- resolveFS(canonicalUrl: string): RichFHIRSchema | undefined;
10
- allSD(): StructureDefinition[];
11
- allFS(): RichFHIRSchema[];
12
- allVS(): any[];
8
+ resolveSd(canonicalUrl: string): StructureDefinition | undefined;
9
+ resolveFs(canonicalUrl: string): RichFHIRSchema | undefined;
10
+ resolveFSGenealogy(canonicalUrl: string): RichFHIRSchema[] | undefined;
11
+ allSd(): StructureDefinition[];
12
+ allFs(): RichFHIRSchema[];
13
+ allVs(): any[];
13
14
  complexTypeDict(): Record<string, RichFHIRSchema>;
14
15
  } & ReturnType<typeof CanonicalManager>;
15
16
  export declare const registerFromManager: (manager: ReturnType<typeof CanonicalManager>, logger?: CodegenLogger, packageInfo?: PackageMeta) => Promise<Register>;
package/dist/typeschema/register.js CHANGED
@@ -38,17 +38,29 @@ export const registerFromManager = async (manager, logger, packageInfo) => {
38
38
  complexTypes[fs.url] = fs;
39
39
  }
40
40
  }
41
+ const resolveFSGenealogy = (canonicalUrl) => {
42
+ let fs = fhirSchemas[canonicalUrl];
43
+ if (!fs)
44
+ return undefined;
45
+ const genealogy = [fs];
46
+ while (fs && fs.base) {
47
+ fs = fhirSchemas[fs.base];
48
+ genealogy.push(fs);
49
+ }
50
+ return genealogy;
51
+ };
41
52
  return {
42
53
  ...manager,
43
- appendFS(fs) {
54
+ appendFs(fs) {
44
55
  fhirSchemas[fs.url] = enrichFHIRSchema(fs);
45
56
  },
46
- resolveFS: (canonicalUrl) => fhirSchemas[canonicalUrl],
57
+ resolveFs: (canonicalUrl) => fhirSchemas[canonicalUrl],
58
+ resolveFSGenealogy: resolveFSGenealogy,
47
59
  ensureCanonicalUrl: (canonicalUrl) => nameDict[canonicalUrl] || canonicalUrl,
48
- allSD: () => Object.values(structureDefinitions),
49
- resolveSD: (canonicalUrl) => structureDefinitions[canonicalUrl],
50
- allFS: () => Object.values(fhirSchemas),
51
- allVS: () => Object.values(valueSets),
60
+ allSd: () => Object.values(structureDefinitions),
61
+ resolveSd: (canonicalUrl) => structureDefinitions[canonicalUrl],
62
+ allFs: () => Object.values(fhirSchemas),
63
+ allVs: () => Object.values(valueSets),
52
64
  complexTypeDict: () => complexTypes,
53
65
  };
54
66
  };
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@atomic-ehr/codegen",
3
- "version": "0.0.1-canary.20250930075344.1c0b689",
3
+ "version": "0.0.1-canary.20250930124137.175bd5f",
4
4
  "description": "Code generation tools for FHIR resources and TypeSchema definitions",
5
5
  "keywords": [
6
6
  "fhir",