@arpproject/recrate 0.1.7 → 0.1.9

package/src/crate-builder/CrateManager/crate-manager.spec.ts

@@ -1,2336 +0,0 @@
-import { describe, test, expect, beforeAll, beforeEach, vi } from "vitest";
-import { CrateManager } from "./crate-manager";
-import { ProfileManager } from "./profile-manager";
-import { readJSON } from "fs-extra";
-import Chance from "chance";
-const chance = Chance();
-import type {
-    CrateManagerType,
-    EntityReference,
-    NormalisedEntityDefinition,
-    NormalisedProfile,
-    ProfileManagerType,
-    UnverifiedCrate,
-    UnverifiedEntityDefinition,
-} from "../types";
-
-describe("Test interacting with the crate", () => {
-    let crate: UnverifiedCrate, cm: CrateManagerType;
-    beforeAll(() => {
-        vi.spyOn(console, "debug").mockImplementation(() => {});
-    });
-    beforeEach(async () => {
-        crate = getBaseCrate();
-        crate["@graph"].push({
-            "@id": "./",
-            "@type": "Dataset",
-            name: "root dataset",
-            text: "something",
-        });
-        cm = new CrateManager({ crate });
-    });
-    test("get root dataset", () => {
-        let rd = cm.getRootDataset();
-        expect(rd["@id"]).toEqual("./");
-    });
-    test("normalising contexts with varying shapes", () => {
-        let context: any = "https://w3id.org/ro/crate/1.1/context";
-        let normalisedContext = cm.__normaliseContext(context);
-        expect(normalisedContext).toEqual(["https://w3id.org/ro/crate/1.1/context"]);
-
-        context = ["https://w3id.org/ro/crate/1.1/context"];
-        normalisedContext = cm.__normaliseContext(context);
-        expect(normalisedContext).toEqual(["https://w3id.org/ro/crate/1.1/context"]);
-
-        context = [
-            "https://w3id.org/ro/crate/1.1/context",
-            { hasPart: "https://schema.org/hasPart" },
-            { schema: "https://schema.org" },
-        ];
-        normalisedContext = cm.__normaliseContext(context);
-        expect(normalisedContext).toEqual([
-            "https://w3id.org/ro/crate/1.1/context",
-            {
-                hasPart: "https://schema.org/hasPart",
-                schema: "https://schema.org",
-            },
-        ]);
-    });
-    test("get context", () => {
-        let context = cm.getContext();
-        expect(context).toEqual(["https://w3id.org/ro/crate/1.1/context"]);
-    });
-    test("set context", () => {
-        cm.setContext({} as any);
-        expect(cm.getContext()).toEqual([]);
-    });
-    test("set profile manager", () => {
-        const profile: any = {
-            metadata: {},
-            classes: {},
-        };
-        const pm: ProfileManagerType = new ProfileManager({ profile }) as ProfileManagerType;
-        expect(pm).toMatchObject({ profile: { metadata: {}, classes: {} } });
-
-        cm.setProfileManager(pm);
-        expect(cm.pm).toMatchObject({ profile: { metadata: {}, classes: {} } });
-    });
-    test(`getting entities from the crate`, () => {
-        // no id provided
-        try {
-            let match = cm.getEntity({} as any);
-        } catch (error) {
-            expect((error as Error).message).toEqual("An id must be provided");
-        }
-
-        // materialise an entity
-        let match = cm.getEntity({ id: chance.url() });
-        expect(match).toMatchObject({ "@type": ["URL"] });
-
-        // matching entity
-        match = cm.getEntity({ id: "./" });
-        expect(match).toMatchObject({
-            "@id": "./",
-            "@type": ["Dataset"],
-            name: "root dataset",
-            text: ["something"],
-        });
-
-        // matching entity - stub only
-        match = cm.getEntity({ id: "./", stub: true });
-        expect(match).toMatchObject({
-            "@id": "./",
-            "@type": ["Dataset"],
-            name: "root dataset",
-        });
-    });
-    test("add a simple entity to the crate", () => {
-        // test 1
-        let entity: UnverifiedEntityDefinition = {
-            "@id": chance.url(),
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let r = cm.addEntity(entity);
-        let ec = cm.exportCrate();
-        expect(ec["@graph"].length).toEqual(3);
-        expect(r).toBeTruthy;
-
-        // test 2
-        entity = {
-            "@id": "something",
-            "@type": "Thing",
-        };
-        r = cm.addEntity(entity);
-        ec = cm.exportCrate();
-        expect(ec["@graph"].length).toEqual(4);
-        expect(r).toBeTruthy;
-
-        // test 3
-        entity = {
-            "@id": "something",
-            "@type": "Person",
-        };
-        r = cm.addEntity(entity);
-        ec = cm.exportCrate();
-        expect(ec["@graph"].length).toEqual(5);
-        expect(r).toBeTruthy;
-
-        // test 4
-        try {
-            entity = {
-                "@id": "http://something.com",
-            };
-            r = cm.addEntity(entity);
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity without defining the type : '@type'.`
-            );
-        }
-
-        // test 5
-        try {
-            entity = {
-                name: "some thing",
-            };
-            r = cm.addEntity({ entity } as UnverifiedEntityDefinition);
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity without an identifier: '@id'.`
-            );
-        }
-
-        // test 6
-        try {
-            entity = {
-                "@id": "./",
-                "@type": "Dataset",
-            };
-            r = cm.addEntity(entity);
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity with id: './' as that will clash with the root dataset.`
-            );
-        }
-
-        // test 7
-        try {
-            entity = {
-                "@id": "#person",
-            };
-            r = cm.addEntity({ entity } as UnverifiedEntityDefinition);
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity without an identifier: '@id'.`
-            );
-        }
-    });
-    test(`prevent adding entities with id's that clash with root dataset or descriptor`, () => {
-        try {
-            cm.addEntity({ "@id": "./", "@type": "Dataset" });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity with id: './' as that will clash with the root dataset.`
-            );
-        }
-        try {
-            cm.addEntity({ "@id": "ro-crate-metadata.json", "@type": "CreativeWork" });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity with id: 'ro-crate-metadata.json' as that will clash with the root descriptor.`
-            );
-        }
-        // ensure it fails even when the type is different
-        try {
-            cm.addEntity({ "@id": "ro-crate-metadata.json", "@type": "Person" });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't add an entity with id: 'ro-crate-metadata.json' as that will clash with the root descriptor.`
-            );
-        }
-    });
-    test("add a simple entity to the crate and export as a template", () => {
-        let entity = {
-            "@id": "#person",
-            "@type": "Person",
-            name: "person",
-            data: "value",
-        };
-        let e = cm.addEntity(entity);
-
-        let template = cm.exportEntityTemplate({ id: e["@id"], resolveDepth: 1 });
-        expect(template).toMatchObject({
-            "@id": "#person",
-            "@type": ["Person"],
-            name: "person",
-            data: "value",
-        });
-    });
-    test(`Ensure no id clashes when entity type is different`, () => {
-        let topic = {
-            "@id": "#1234",
-            "@type": "Topic",
-            name: "topic",
-        };
-        let e = cm.addEntity(topic);
-        expect(e).toEqual({ "@id": "#1234", "@type": ["Topic"], name: "topic" });
-
-        let theme = {
-            "@id": "#1234",
-            "@type": "Theme",
-            name: "theme",
-        };
-        e = cm.addEntity(theme);
-        expect(e).toEqual({ "@id": "#e4", "@type": ["Theme"], name: "theme" });
-
-        e = cm.addEntity(e);
-        expect(e).toMatchObject({ "@id": "#e4", "@type": ["Theme"], name: "theme" });
-    });
-    test("add a complex entity to the crate and export as a template", () => {
-        let entity: UnverifiedEntityDefinition = {
-            "@id": "#person",
-            "@type": "Person",
-            name: "person",
-            data: "value",
-        };
-        let e = cm.addEntity(entity);
-        entity = {
-            "@id": "#organisation",
-            "@type": "Organisation",
-            name: "organisation",
-            ceo: { "@id": "http://person.name" },
-        };
-        e = cm.addEntity(entity);
-        cm.linkEntity({
-            id: "#person",
-            property: "organisation",
-            value: { "@id": "#organisation" },
-        });
-
-        let template = cm.exportEntityTemplate({
-            id: "#person",
-            resolveDepth: 1,
-        });
-        expect(template).toEqual({
-            "@id": "#person",
-            "@type": ["Person"],
-            name: "person",
-            data: "value",
-            organisation: {
-                "@id": "#organisation",
-                "@type": ["Organisation"],
-                name: "organisation",
-            },
-        });
-    });
-    test(`fail template export - bad resolve depth`, () => {
-        // test bad resolveDepth
-        try {
-            let _template = cm.exportEntityTemplate({
-                id: "#person",
-                resolveDepth: 4,
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(`resolveDepth can only be 0 or 1`);
-        }
-    });
-    test("add a complex entity to the crate", () => {
-        let url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: "a person",
-            text: "some text",
-            author: [{ "@id": url }],
-        };
-        let e = cm.addEntity(entity);
-        let match = cm.getEntity({ id: e["@id"] });
-        expect(match).toMatchObject({
-            "@id": url,
-            "@type": ["Person"],
-            name: "a person",
-            text: ["some text"],
-            author: [{ "@id": url }],
-        });
-    });
-    test("update entity name", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e: NormalisedEntityDefinition = cm.addEntity(entity);
-        expect(e).toBeTruthy;
-
-        let r = cm.updateProperty({
-            id: entity["@id"],
-            idx: 0,
-            property: "name",
-            value: "something else",
-        });
-        expect(r).toBeTruthy;
-        e = cm.getEntity({ id: entity["@id"] }) as NormalisedEntityDefinition;
-        expect(e.name).toEqual("something else");
-    });
-    test("update entity @type", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e: NormalisedEntityDefinition = cm.addEntity(entity);
-        expect(e).toBeTruthy;
-
-        // test 1
-        let r = cm.updateProperty({
-            id: entity["@id"],
-            property: "@type",
-            idx: 0,
-            value: ["Person", "Adult"],
-        });
-        expect(r).toBeTruthy;
-        e = cm.getEntity({ id: entity["@id"] }) as NormalisedEntityDefinition;
-        expect(e["@type"]).toEqual(["Person", "Adult"]);
-
-        // test 2
-        r = cm.updateProperty({
-            id: entity["@id"],
-            property: "@type",
-            value: ["Adult", "Person", "Adult"],
-        });
-        expect(r).toBeTruthy;
-        e = cm.getEntity({ id: entity["@id"] }) as NormalisedEntityDefinition;
-        expect(e["@type"]).toEqual(["Adult", "Person"]);
-    });
-    test("update entity '@id'", () => {
-        crate = getBaseCrate();
-
-        const authorId = "http://schema.org/person";
-        const newAuthorId = "http://schema.org/author";
-        crate["@graph"].push({
-            "@id": "./",
-            "@type": ["Dataset"],
-            name: "rd",
-            author: [{ "@id": authorId }],
-        });
-        crate["@graph"].push({
-            "@id": authorId,
-            "@type": ["Person"],
-            name: "a person",
-            group: [{ "@id": "#g1" }],
-        });
-        crate["@graph"].push({
-            "@id": "#g1",
-            "@type": ["Group"],
-            name: "a group",
-        });
-        cm = new CrateManager({ crate });
-
-        cm.updateProperty({
-            id: authorId,
-            property: "@id",
-            value: newAuthorId,
-        });
-
-        let ec = cm.exportCrate();
-
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": newAuthorId } },
-            {
-                "@id": newAuthorId,
-                "@reverse": {
-                    author: {
-                        "@id": "./",
-                    },
-                },
-            },
-            {
-                "@id": "#g1",
-                "@reverse": {
-                    group: {
-                        "@id": "http://schema.org/author",
-                    },
-                },
-            },
-        ]);
-    });
-    test(`trying to set a property on a non-existent entity`, () => {
-        let result = cm.updateProperty({
-            id: "http://schema.org/person",
-            property: "@id",
-            value: "new",
-        });
-        expect(result).toEqual(undefined);
-    });
-    test("delete an entity", () => {
-        const f1 = cm.addFile("/file1.txt");
-        const f2 = cm.addFile("/file2.txt");
-        let r1 = cm.addEntity({ "@id": "_:r1", "@type": "Relationship", name: "r1" });
-        let r2 = cm.addEntity({ "@id": "_:r2", "@type": "Relationship", name: "r2" });
-
-        // cm.linkEntity({ id: "./", property: "hasPart", value: r1 });
-        // cm.linkEntity({ id: "./", property: "hasPart", value: r2 });
-
-        // delete an entity that is not linked to anything
-        cm.deleteEntity({ id: r1["@id"] });
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file1.txt" },
-            { "@id": "file2.txt" },
-            { "@id": "_:r2" },
-        ]);
-
-        // console.log(JSON.stringify(cm.exportCrate()["@graph"], null, 2));
-
-        // re-add the entity and link a file to it
-        r1 = cm.addEntity({ "@id": "_:r1", "@type": "Relationship", name: "r1" });
-        cm.linkEntity({ id: "./", property: "hasPart", value: r1 });
-        cm.setProperty({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "",
-            value: f1,
-        });
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file1.txt" },
-            { "@id": "file2.txt" },
-            { "@id": "_:r2" },
-            { "@id": "_:r1", object: { "@id": "file1.txt" } },
-        ]);
-
-        // now delete it and check everything else is still there
-        cm.deleteEntity({ id: r1["@id"] });
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file1.txt" },
-            { "@id": "file2.txt" },
-            { "@id": "_:r2" },
-        ]);
-        // console.log(JSON.stringify(cm.exportCrate()["@graph"], null, 2));
-
-        // re-add the entity and link a file to it
-        r1 = cm.addEntity({ "@id": "_:r1", "@type": "Relationship", name: "r1" });
-        // cm.linkEntity({ id: "./", property: "hasPart", value: r1 });
-        cm.setProperty({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "",
-            value: f1,
-        });
-
-        //  link the same file to a different entity
-        cm.setProperty({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "",
-            value: f1,
-        });
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file1.txt" },
-            { "@id": "file2.txt" },
-            { "@id": "_:r2", object: { "@id": "file1.txt" } },
-            { "@id": "_:r1", object: { "@id": "file1.txt" } },
-        ]);
-
-        // now delete it and check everything else is still there
-        cm.deleteEntity({ id: r1["@id"] });
-        // console.log(JSON.stringify(cm.exportCrate()["@graph"], null, 2));
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file1.txt" },
-            { "@id": "file2.txt" },
-            { "@id": "_:r2" },
-        ]);
-    });
-    test("prevent deleting the root dataset and the root descriptor", () => {
-        try {
-            cm.deleteEntity({ id: "./" });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't delete the root dataset or the root descriptor.`
-            );
-        }
-        try {
-            cm.deleteEntity({ id: "ro-crate-metadata.json" });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `You can't delete the root dataset or the root descriptor.`
-            );
-        }
-    });
-    test(`fail - property updates `, () => {
-        // fail updating core property
-        try {
-            cm.setProperty({
-                id: "./",
-                property: "@id",
-                value: "something else",
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `This method does not operate on @id, @type, @reverse, name`
-            );
-        }
-        //  fail bad value
-        try {
-            cm.setProperty({
-                id: "./",
-                property: "new",
-                value: {} as EntityReference,
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `value must be a string, number, boolean or object with '@id'`
-            );
-        }
-        try {
-            cm.setProperty({
-                id: "./",
-                property: "new",
-                value: [] as any,
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `value must be a string, number, boolean or object with '@id'`
-            );
-        }
-        // fail - wrong method
-        try {
-            cm.updateProperty({
-                id: "./",
-                property: "@id",
-                value: [],
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(
-                `'@id' property must be a string or not defined at all`
-            );
-        }
-    });
-    test("adding a property to an entity", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e = cm.addEntity(entity);
-
-        cm.setProperty({
-            id: e["@id"],
-            property: "author",
-            value: "something else",
-        });
-        e = cm.getEntity({ id: e["@id"] }) as NormalisedEntityDefinition;
-        expect(e.author.length).toEqual(1);
-        expect(e.author[0]).toEqual("something else");
-    });
-    test("a sequence of operations around adding and manipulating properties on an entity", () => {
-        cm.setProperty({ id: "./", property: "new", value: "some text" });
-        const authorId = chance.url();
-        cm.setProperty({ id: "./", property: "author", value: { "@id": authorId } });
-        cm.setProperty({ id: "./", property: "author", value: "text" });
-        cm.setProperty({ id: "./", property: "author", value: 3 });
-
-        let entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            new: ["some text"],
-            author: [{ "@id": authorId }, "text", 3],
-        });
-        // console.log(entity);
-
-        entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            new: ["some text"],
-            author: [{ "@id": authorId }, "text", 3],
-        });
-
-        cm.updateProperty({ id: "./", property: "author", idx: 1, value: "new" });
-        entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            author: [{ "@id": authorId }, "new", 3],
-        });
-
-        cm.setProperty({ id: "./", property: "author", value: 3 });
-        cm.updateProperty({ id: "./", property: "author", idx: 1, value: "new" });
-        entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            author: [{ "@id": authorId }, "new", 3, 3],
-        });
-        // console.log(entity);
-    });
-    test("delete a instance of data attached to a property", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-            text: "some text",
-        };
-        let e = cm.addEntity(entity);
-        e = cm.getEntity({ id: e["@id"] }) as NormalisedEntityDefinition;
-
-        cm.deleteProperty({
-            id: e["@id"],
-            property: "text",
-            idx: 0,
-        });
-
-        e = cm.getEntity({ id: e["@id"] }) as NormalisedEntityDefinition;
-        expect(e).not.toHaveProperty("text");
-    });
-    test("delete all data connected to a property", () => {
-        let entity: UnverifiedEntityDefinition = {
-            "@id": "#person1",
-            "@type": "Person",
-            name: "person1",
-            text: ["some text", "some other text"],
-        };
-        let e1 = cm.addEntity(entity);
-        e1 = cm.getEntity({ id: e1["@id"] }) as NormalisedEntityDefinition;
-
-        // link it to another entity
-        entity = {
-            "@id": "#person2",
-            "@type": "Person",
-            name: "person2",
-        };
-        let e2 = cm.addEntity(entity);
-        e2 = cm.getEntity({ id: e2["@id"] }) as NormalisedEntityDefinition;
-
-        cm.linkEntity({ id: e1["@id"], property: "knows", value: e2 });
-
-        let crate = cm.exportCrate();
-        expect(crate["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-            },
-            {
-                "@id": "#person1",
-                "@type": "Person",
-                name: "person1",
-                text: ["some text", "some other text"],
-                knows: { "@id": "#person2" },
-            },
-            {
-                "@id": "#person2",
-                "@type": "Person",
-                name: "person2",
-            },
-        ]);
-
-        // delete a property without associations
-        cm.deleteProperty({
-            id: e1["@id"],
-            property: "text",
-        });
-
-        e1 = cm.getEntity({ id: e1["@id"] }) as NormalisedEntityDefinition;
-        expect(e1).not.toHaveProperty("text");
-
-        // ensure it doesn't fail when that same prop doesn't exist
-        cm.deleteProperty({
-            id: e1["@id"],
-            property: "text",
-        });
-        e1 = cm.getEntity({ id: e1["@id"] }) as NormalisedEntityDefinition;
-        expect(e1).not.toHaveProperty("text");
-
-        expect(crate["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-            },
-            {
-                "@id": "#person1",
-                "@type": "Person",
-                name: "person1",
-                knows: { "@id": "#person2" },
-            },
-            {
-                "@id": "#person2",
-                "@type": "Person",
-                name: "person2",
-            },
-        ]);
-
-        // delete a property with associations
-        cm.deleteProperty({
-            id: e1["@id"],
-            property: "knows",
-        });
-        e1 = cm.getEntity({ id: e1["@id"] }) as NormalisedEntityDefinition;
-        expect(e1).not.toHaveProperty("text");
-
-        crate = cm.exportCrate();
-        expect(crate["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-            },
-            {
-                "@id": "#person1",
-            },
-            {
-                "@id": "#person2",
-            },
-        ]);
-    });
-    test("a sequence of operations around deleting a property on an entity", () => {
-        cm.setProperty({ id: "./", property: "new", value: "some text" });
-        const authorId = chance.url();
-        cm.setProperty({ id: "./", property: "author", value: { "@id": authorId } });
-        cm.setProperty({ id: "./", property: "author", value: "text" });
-        cm.setProperty({ id: "./", property: "author", value: 3 });
-
-        let entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            new: ["some text"],
-            author: [{ "@id": authorId }, "text", 3],
-        });
-
-        cm.deleteProperty({ id: "./", property: "author", idx: 1 });
-        entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            author: [{ "@id": authorId }, 3],
-        });
-
-        cm.setProperty({ id: "./", property: "author", value: 3 });
-        entity = cm.getEntity({ id: "./" });
-        cm.deleteProperty({ id: "./", property: "author", idx: 0 });
-        cm.deleteProperty({ id: "./", property: "author", idx: 1 });
-        entity = cm.getEntity({ id: "./" });
-        expect(entity).toMatchObject({
-            "@id": "./",
-            author: [3],
-        });
-    });
-    test("link two entities", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-            text: "some text",
-        };
-        let e = cm.addEntity(entity);
-
-        cm.linkEntity({
-            id: "./",
-            property: "author",
-            value: { "@id": e["@id"] },
-        });
-
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-                author: {
-                    "@id": e["@id"],
-                },
-            },
-            {
-                "@id": e["@id"],
-                "@reverse": {
-                    author: {
-                        "@id": "./",
-                    },
-                },
-            },
-        ]);
-    });
-    test("unlink two entities", () => {
-        const url = chance.url();
-        let entity = {
-            "@id": url,
-            "@type": "Person",
-            name: chance.sentence(),
-            text: "some text",
-        };
-        let e = cm.addEntity(entity);
-
-        cm.linkEntity({
-            id: "./",
-            property: "author",
-            value: { "@id": e["@id"] },
-        });
-
-        cm.unlinkEntity({
-            id: "./",
-            property: "author",
-            value: {
-                "@id": e["@id"],
-            },
-        });
-
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": url },
-        ]);
-        expect(ec["@graph"][1]).not.toHaveProperty("author");
-    });
-    test("fail - fail linking / unlinking entities", () => {
-        try {
-            cm.linkEntity({
-                id: "./",
-                property: "author",
-                value: "string" as any,
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(`value must be an object with '@id' defined`);
-        }
-
-        try {
-            cm.unlinkEntity({
-                id: "./",
-                property: "author",
-                value: "string" as any,
-            });
-        } catch (error) {
-            expect((error as Error).message).toEqual(`value must be an object with '@id' defined`);
-        }
-    });
-    test("linking / unlinking two entities and handling inverse property associations", () => {
-        const profile: NormalisedProfile = {
-            metadata: {} as any,
-            classes: [] as any,
-            propertyAssociations: [
-                {
-                    property: "keywords",
-                    propertyId: "https://schema.org/keywords",
-                    inverse: {
-                        property: "isKeywordOf",
-                        propertyId: "https://schema.org/isKeywordOf",
-                    },
-                },
-                {
-                    property: "hasMember",
-                    propertyId: "https://schema.org/hasMember",
-                    inverse: {
-                        property: "isMemberOf",
-                        propertyId: "https://schema.org/isMemberOf",
-                    },
-                },
-            ],
-        };
-
-        const pm = new ProfileManager({ profile }) as ProfileManagerType;
-        cm.setProfileManager(pm);
-
-        let entity = {
-            "@id": "#term",
-            "@type": "DefinedTerm",
-            name: "a term",
-        };
-        const e = cm.addEntity(entity);
-
-        // link to root dataset and check
-        cm.linkEntity({
-            id: "./",
-            property: "keywords",
-            propertyId: "http://schema.org/keywords",
-            value: { "@id": e["@id"] },
-        });
-        let crate = cm.exportCrate();
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-        expect(crate["@graph"][1]).toMatchObject({
-            "@id": "./",
-            keywords: {
-                "@id": "#term",
-            },
-            "@reverse": {
-                isKeywordOf: {
-                    "@id": "#term",
-                },
-            },
-        });
-        expect(crate["@graph"][2]).toMatchObject({
-            "@id": "#term",
-            isKeywordOf: {
-                "@id": "./",
-            },
-            "@reverse": {
-                keywords: {
-                    "@id": "./",
-                },
-            },
-        });
-
-        cm.unlinkEntity({
-            id: "./",
-            property: "keywords",
-            value: { "@id": e["@id"] },
-        });
-        crate = cm.exportCrate();
-        expect(crate["@graph"][1]).toMatchObject({
-            "@id": "./",
-            "@reverse": {},
-        });
-        expect(crate["@graph"][2]).toMatchObject({
-            "@id": "#term",
-            "@reverse": {},
-        });
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-    });
-    test("more complex:: linking / unlinking two entities and handling inverse property associations", () => {
-        const profile = {
-            metadata: {} as any,
-            classes: [] as any,
-            propertyAssociations: [
-                {
-                    property: "keywords",
-                    propertyId: "https://schema.org/keywords",
-                    inverse: {
-                        property: "isKeywordOf",
-                        propertyId: "https://schema.org/isKeywordOf",
-                    },
-                },
-                {
-                    property: "hasMember",
-                    propertyId: "https://schema.org/hasMember",
-                    inverse: {
-                        property: "isMemberOf",
-                        propertyId: "https://schema.org/isMemberOf",
-                    },
-                },
-            ],
-        };
-
-        const pm = new ProfileManager({ profile }) as ProfileManagerType;
-        cm.setProfileManager(pm);
-
-        let entity = {
-            "@id": "#term",
-            "@type": "DefinedTerm",
-            name: "a term",
-        };
-        const e = cm.addEntity(entity);
-
-        // link to root dataset and check
-        cm.linkEntity({
-            id: "./",
-            property: "keywords",
-            propertyId: "http://schema.org/keywords",
-            value: { "@id": e["@id"] },
-        });
-        let crate = cm.exportCrate();
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-        expect(crate["@context"][1]).toMatchObject({
-            isKeywordOf: "https://schema.org/isKeywordOf",
-        });
-        expect(crate["@graph"][1].keywords).toEqual({ "@id": "#term" });
-        expect((crate["@graph"][1]["@reverse"] as any).isKeywordOf).toEqual({ "@id": "#term" });
-        expect(crate["@graph"][2].isKeywordOf).toEqual({ "@id": "./" });
-        expect((crate["@graph"][2]["@reverse"] as any).keywords).toEqual({ "@id": "./" });
-
-        // link to itself and check
-        cm.linkEntity({
-            id: e["@id"],
-            property: "keywords",
-            value: { "@id": e["@id"] },
-        });
-        crate = cm.exportCrate();
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-        expect(crate["@graph"][2]).toMatchObject({
-            isKeywordOf: [{ "@id": "./" }, { "@id": "#term" }],
-            keywords: { "@id": "#term" },
-            "@reverse": {
-                keywords: [{ "@id": "./" }, { "@id": "#term" }],
-                isKeywordOf: { "@id": "#term" },
-            },
-        });
-
-        // link to root dataset via an inverse association
-        cm.linkEntity({
-            id: e["@id"],
-            property: "isMemberOf",
-            value: { "@id": "./" },
-        });
-        crate = cm.exportCrate();
-
-        expect(crate["@graph"][2]).toMatchObject({
-            isMemberOf: { "@id": "./" },
-            "@reverse": {
-                keywords: [{ "@id": "./" }, { "@id": "#term" }],
-                isKeywordOf: { "@id": "#term" },
-                hasMember: { "@id": "./" },
-            },
-        });
-        expect(crate["@graph"][1]).toMatchObject({
-            hasMember: { "@id": "#term" },
-            "@reverse": { isMemberOf: { "@id": "#term" } },
-        });
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-
-        cm.unlinkEntity({
-            id: e["@id"],
-            property: "keywords",
-            value: {
-                "@id": e["@id"],
-            },
-        });
-        crate = cm.exportCrate();
-        // console.log(JSON.stringify(crate["@graph"][1], null, 2));
-        // console.log(JSON.stringify(crate["@graph"], null, 2));
-        expect(crate["@graph"][1]).toMatchObject({
-            "@id": "./",
-            "@type": "Dataset",
-            keywords: {
-                "@id": "#term",
-            },
-            hasMember: {
-                "@id": "#term",
-            },
-            "@reverse": {
-                about: {
-                    "@id": "ro-crate-metadata.json",
-                },
-                isKeywordOf: {
-                    "@id": "#term",
-                },
-                isMemberOf: {
-                    "@id": "#term",
-                },
-            },
-        });
-        expect(crate["@graph"][2]).toMatchObject({
-            "@id": "#term",
-            "@type": "DefinedTerm",
-            name: "a term",
-            isKeywordOf: {
-                "@id": "./",
-            },
-            isMemberOf: {
-                "@id": "./",
-            },
-            "@reverse": {
-                keywords: {
-                    "@id": "./",
-                },
-                hasMember: {
-                    "@id": "./",
-                },
-            },
-        });
-
-        // cm.deleteEntity({ id: e["@id"] });
-
-        // console.log("BEFORE");
-        // crate = cm.exportCrate();
-        // // console.log(JSON.stringify(crate["@graph"], null, 2));
-        // expect(crate["@graph"].length).toEqual(2);
-
-        // // add it back in and link it to root dataset via keywords
-        // cm.addEntity(entity);
-        // cm.linkEntity({
-        //     id: "./",
-        //     property: "keywords",
-        //     value: { "@id": e["@id"] },
-        // });
-        // crate = cm.exportCrate();
-        // // console.log(JSON.stringify(crate["@graph"], null, 2));
-
-        // // now unlink from the root dataset via keywords prop
-        // cm.unlinkEntity({
-        //     id: "./",
-        //     property: "keywords",
-        //     value: {
-        //         "@id": e["@id"],
-        //     },
-        // });
-        // crate = cm.exportCrate();
-        // expect(crate["@graph"][2]).toMatchObject({
-        //     "@id": "#term",
-        //     "@type": "DefinedTerm",
-        //     name: "a term",
-        //     "@reverse": {},
-        // });
-    });
-    test("a sequence of complex '@id' updates across the crate", () => {
-        let entity = {
-            "@id": "an id",
-            "@type": "Person",
-            name: "person",
-        };
-        let e1 = cm.addEntity(entity);
-        cm.linkEntity({ id: "./", property: "author", value: { "@id": e1["@id"] } });
-
-        e1 = cm.getEntity({ id: e1["@id"] }) as NormalisedEntityDefinition;
-        expect(e1).toMatchObject({ "@id": "#an%20id", "@type": ["Person"], name: "person" });
-
-        let entityChild = {
-            "@id": "child id",
-            "@type": "Person",
-            name: "child",
-        };
-        let e2 = cm.addEntity(entityChild);
-        cm.linkEntity({ id: "#an%20id", property: "child", value: { "@id": e2["@id"] } });
-        e2 = cm.getEntity({ id: e2["@id"] }) as NormalisedEntityDefinition;
-        expect(e2).toMatchObject({ "@id": "#child%20id", "@type": ["Person"], name: "child" });
-
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "#an%20id" } },
-            {
-                "@id": "#an%20id",
-                child: {
-                    "@id": "#child%20id",
-                },
-                "@reverse": {
-                    author: {
-                        "@id": "./",
-                    },
-                },
-            },
-            {
-                "@id": "#child%20id",
-                "@reverse": {
-                    child: {
-                        "@id": "#an%20id",
-                    },
-                },
-            },
-        ]);
-
-        // change the id to #a new id
-        cm.updateProperty({ id: e1["@id"], property: "@id", value: "a new id" });
-        ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "#a%20new%20id" } },
-            {
-                "@id": "#a%20new%20id",
-            },
-            {
-                "@id": "#child%20id",
-                "@reverse": {
-                    child: {
-                        "@id": "#a%20new%20id",
-                    },
-                },
-            },
-        ]);
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-
-        // change the id to http://schema.org/person
-        cm.updateProperty({
-            id: "#a%20new%20id",
-            property: "@id",
-            value: "http://schema.org/person",
-        });
-        ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "http://schema.org/person" } },
-            {
-                "@id": "http://schema.org/person",
-            },
-            {
-                "@id": "#child%20id",
-                "@reverse": {
-                    child: {
-                        "@id": "http://schema.org/person",
-                    },
-                },
-            },
-        ]);
-
-        // change the id to #a new id
-        cm.updateProperty({
-            id: "http://schema.org/person",
-            property: "@id",
-            value: "a new id",
-        });
-        ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "#a%20new%20id" } },
-            {
-                "@id": "#a%20new%20id",
-            },
-            {
-                "@id": "#child%20id",
-                "@reverse": {
-                    child: {
-                        "@id": "#a%20new%20id",
-                    },
-                },
-            },
-        ]);
-
-        // change the id to http://schema.org/person
-        cm.updateProperty({
-            id: "#a%20new%20id",
-            property: "@id",
-            value: "http://schema.org/person",
-        });
-        ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "http://schema.org/person" } },
-            {
-                "@id": "http://schema.org/person",
-            },
-            {
-                "@id": "#child%20id",
-                "@reverse": {
-                    child: {
-                        "@id": "http://schema.org/person",
-                    },
-                },
-            },
-        ]);
-    });
-    test("adding a property that is a link to another entity in the crate", () => {
-        crate = getBaseCrate();
-        crate["@graph"].push({
-            "@id": "./",
-            "@type": "Dataset",
-            name: "rd",
-        });
-        crate["@graph"].push({
-            "@id": "#person",
-            "@type": "Person",
-            name: "author",
-        });
-
-        let cm = new CrateManager({ crate });
-        cm.setProperty({ id: "./", property: "author", value: { "@id": "#person" } });
-
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "#person" } },
-            { "@id": "#person", "@reverse": { author: { "@id": "./" } } },
-        ]);
-    });
-    test("adding a property that is not a link to another entity in the crate", () => {
-        crate = getBaseCrate();
-        crate["@graph"].push({
-            "@id": "./",
-            "@type": "Dataset",
-            name: "rd",
-        });
-
-        let cm = new CrateManager({ crate });
-        cm.setProperty({ id: "./", property: "author", value: { "@id": "#person" } });
-
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": "#person" } },
-        ]);
-    });
-    test("add an entity to the crate and then get it back", () => {
-        let entity = {
-            "@id": chance.url(),
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e = cm.addEntity(entity);
-        let match = cm.getEntity({ id: entity["@id"] });
-        expect(match).toMatchObject(e);
-    });
-    test("find entities by id, type, name", () => {
-        let id = chance.url();
-        let name = chance.sentence();
-        let entity = {
-            "@id": id,
-            "@type": "Person",
-            name: name,
-        };
-        let e = cm.addEntity(entity);
-        let match = [...cm.getEntities({ query: id })];
-        expect(match.length).toEqual(1);
-
-        match = [...cm.getEntities({ query: id, type: "Person" })];
-        expect(match.length).toEqual(1);
-
-        match = [...cm.getEntities({ query: name.slice(0, 3), type: "Person" })];
-        expect(match.length).toEqual(1);
-
-        match = [...cm.getEntities({ type: "Pers" })];
-        expect(match.length).toEqual(1);
-
-        match = [
-            ...cm.getEntities({
-                limit: 0,
-                type: "Perso",
-                query: name.slice(0, 3),
-            }),
-        ];
-        expect(match.length).toEqual(1);
-
-        try {
-            [...cm.getEntities({ query: {} as any })];
-        } catch (error) {
-            expect((error as Error).message).toEqual(`query must be a string`);
-        }
-        try {
-            [...cm.getEntities({ type: {} as any })];
-        } catch (error) {
-            expect((error as Error).message).toEqual(`type must be a string`);
-        }
-    });
-    test("add an entity then delete it and confirm it's gone", () => {
-        let entity = {
-            "@id": chance.url(),
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e = cm.addEntity(entity);
-        cm.deleteEntity({ id: e["@id"] });
-        let match = cm.getEntity({ id: entity["@id"] });
-        expect(match).toBeUndefined;
-    });
-    test("exporting a simple crate file without unlinked entities", async () => {
-        let crate = getBaseCrate();
-        crate = addRootDataset({ crate });
-
-        let cm = new CrateManager({ crate });
-        let entity = {
-            "@id": chance.url(),
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        let e = cm.addEntity(entity);
-        cm.deleteEntity({ id: e["@id"] });
-
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-            },
-        ]);
-    });
-    test("crate exporting", async () => {
-        let crate = getBaseCrate();
-        crate = addRootDataset({ crate });
-
-        let cm = new CrateManager({ crate });
-
-        // export base crate
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([{ "@id": "ro-crate-metadata.json" }, { "@id": "./" }]);
-
-        // add entity and export
-        let entity = {
-            "@id": chance.url(),
-            "@type": "Person",
-            name: chance.sentence(),
-        };
-        cm.addEntity(entity);
-        ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": entity["@id"] },
-        ]);
-
-        // link ./ -> entity and export
-        cm.setProperty({ id: "./", property: "author", value: entity });
-        ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", author: { "@id": entity["@id"] } },
-            { "@id": entity["@id"], "@reverse": { author: { "@id": "./" } } },
-        ]);
-
-        // link entity -> ./ and export - ie ensure it can handle circular refs
-        cm.setProperty({ id: entity["@id"], property: "isAuthorOf", value: { "@id": "./" } });
-        ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./", "@reverse": { isAuthorOf: { "@id": entity["@id"] } } },
-            { "@id": entity["@id"], isAuthorOf: { "@id": "./" } },
-        ]);
-    });
-    test("fail flattening", () => {
-        try {
-            let flattened = cm.flatten([] as any);
-        } catch (error) {
-            expect((error as Error).message).toEqual(`flatten only takes an object.`);
-        }
-    });
-    test(`should be able to flatten a complex entity - like one coming from a datapack`, async () => {
-        const json = {
-            "@id": "http://some.thing",
-            "@type": "Thing",
-            name: "level1",
-            level: {
-                "@id": "http://2.some.thing",
-                "@type": "Thing",
-                name: "level2",
-                level: {
-                    "@id": "http://3.some.thing",
-                    "@type": "Thing",
-                    name: "level3",
-                },
-                other: [
-                    {
-                        "@id": "http://4.some.thing",
-                        "@type": "Thing",
-                        name: "level4",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                        "@type": "Thing",
-                        name: "level5",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                        "@type": "Thing",
-                        name: "level5",
-                    },
-                ],
-            },
-        };
-        let flattened = cm.flatten(json);
-        // console.log(JSON.stringify(flattened, null, 2));
-
-        expect(flattened).toMatchObject([
-            {
-                "@id": "http://some.thing",
-                "@type": "Thing",
-                name: "level1",
-                level: [
-                    {
-                        "@id": "http://2.some.thing",
-                    },
-                ],
-            },
-            {
-                "@id": "http://2.some.thing",
-                "@type": "Thing",
-                name: "level2",
-                level: [
-                    {
-                        "@id": "http://3.some.thing",
-                    },
-                ],
-                other: [
-                    {
-                        "@id": "http://4.some.thing",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                    },
-                ],
-            },
-            {
-                "@id": "http://3.some.thing",
-                "@type": "Thing",
-                name: "level3",
-            },
-            {
-                "@id": "http://4.some.thing",
-                "@type": "Thing",
-                name: "level4",
-            },
-            {
-                "@id": "http://5.some.thing",
-                "@type": "Thing",
-                name: "level5",
-            },
-            {
-                "@id": "http://5.some.thing",
-                "@type": "Thing",
-                name: "level5",
-            },
-        ]);
-
-        cm.ingestAndLink({
-            id: "./",
-            property: "language",
-            propertyId: "https://schema.org/languageId",
-            json,
-        });
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-                language: {
-                    "@id": "http://some.thing",
-                },
-            },
-            {
-                "@id": "http://some.thing",
-                name: "level1",
-                level: {
-                    "@id": "http://2.some.thing",
-                },
-                "@reverse": {
-                    language: { "@id": "./" },
-                },
-            },
-            {
-                "@id": "http://2.some.thing",
-                name: "level2",
-                level: {
-                    "@id": "http://3.some.thing",
-                },
-                other: [
-                    {
-                        "@id": "http://4.some.thing",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                    },
-                    {
-                        "@id": "http://5.some.thing",
-                    },
-                ],
-                "@reverse": {
-                    level: { "@id": "http://some.thing" },
-                },
-            },
-            {
-                "@id": "http://3.some.thing",
-                name: "level3",
-                "@reverse": {
-                    level: { "@id": "http://2.some.thing" },
-                },
-            },
-            {
-                "@id": "http://4.some.thing",
-                name: "level4",
-                "@reverse": {
-                    other: { "@id": "http://2.some.thing" },
-                },
-            },
-            {
-                "@id": "http://5.some.thing",
-                name: "level5",
-                "@reverse": {
-                    other: { "@id": "http://2.some.thing" },
-                },
-            },
-        ]);
-    });
-    test(`it should handle ingesting json objects with text arrays`, async () => {
-        let json = {
-            "@id": "http://some.thing",
-            "@type": "Thing",
-            alternateName: ["name1", "name2", "name3"],
-        };
-        cm.ingestAndLink({
-            id: "./",
-            property: "language",
-            propertyId: "https://schema.org/languageId",
-            json,
-        });
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-                language: {
-                    "@id": "http://some.thing",
-                },
-            },
-            {
-                "@id": "http://some.thing",
-                "@reverse": {
-                    language: {
-                        "@id": "./",
-                    },
-                },
-            },
-        ]);
-    });
-    test(`it should handle ingesting json objects whilst ignoring empty properties`, async () => {
-        let json = {
-            "@id": "http://some.thing",
-            "@type": "Thing",
-            alternateName: "",
-        };
-        cm.ingestAndLink({
-            id: "./",
-            property: "language",
-            propertyId: "https://schema.org/languageId",
-            json,
-        });
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-                language: {
-                    "@id": "http://some.thing",
-                },
-            },
-            {
-                "@id": "http://some.thing",
-                "@reverse": {
-                    language: {
-                        "@id": "./",
-                    },
-                },
-            },
-        ]);
-        expect(ec["@graph"][2]).not.toHaveProperty("alternateName");
-    });
-    test(`it should be able to handle self links`, async () => {
-        const json = {
-            "@id": "http://some.thing",
-            "@type": "Thing",
-            name: "level1",
-            level: {
-                "@id": "http://some.thing",
-                "@type": "Thing",
-                name: "level2",
-            },
-        };
-        cm.ingestAndLink({
-            id: "./",
-            property: "author",
-            propertyId: "https://schema.org/author",
-            json,
-        });
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-
-        // delete the author property from the root dataset
-        cm.deleteProperty({
-            id: "./",
-            property: "author",
-            idx: 0,
-        });
-
-        ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec["@graph"], null, 2));
-
-        expect(ec["@graph"].length).toEqual(3);
-        expect(ec["@graph"]).toMatchObject([
-            {
-                "@id": "ro-crate-metadata.json",
-            },
-            {
-                "@id": "./",
-                "@type": "Dataset",
-            },
-            {
-                "@id": "http://some.thing",
-                level: {
-                    "@id": "http://some.thing",
-                },
-            },
-        ]);
-    });
-    test(`it should be able to ingest a complex entity, unlink it, and remove all descendants`, async () => {
-        const json = {
-            "@id": "http://some.thing",
-            "@type": "Thing",
-            name: "level1",
-            level: {
-                "@id": "http://some.other.thing",
-                "@type": "Thing",
-                name: "level2",
-            },
-        };
-        cm.ingestAndLink({
-            id: "./",
-            property: "author",
-            propertyId: "https://schema.org/author",
-            json,
-        });
-
-        // delete the author property from the root dataset
-        cm.deleteProperty({
-            id: "./",
-            property: "author",
-            idx: 0,
-        });
-
-        cm.purgeUnlinkedEntities();
-        let ec = cm.exportCrate();
-        expect(ec["@graph"]).toMatchObject([{ "@id": "ro-crate-metadata.json" }, { "@id": "./" }]);
-    });
-    test(`check purging unlinked nodes; confirm it handles linking type entities like relationships`, () => {
-        // add a blank node not linked to anything
-        cm.addBlankNode("Relationship");
-
-        // and an entity linked to root dataset
-        cm.ingestAndLink({
-            id: "./",
-            property: "people",
-            propertyId: "https://schema.org/author",
-            json: { "@id": "#1", "@type": "Person", name: "#1" },
-        });
-
-        // confirm they are both there
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "_:Relationship1" },
-            { "@id": "#1" },
-        ]);
-
-        // purge unlinked and confirm blank node gone
-        cm.purgeUnlinkedEntities();
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "#1" },
-        ]);
-
-        // re add blank node and link to the entity in the graph
-        const e = cm.addBlankNode("Relationship");
-        cm.setProperty({
-            id: e["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": "#1" },
-        });
-        // console.log(cm.exportCrate()["@graph"]);
-        cm.purgeUnlinkedEntities();
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "#1" },
-            { "@id": "_:Relationship2" },
-        ]);
-        // console.log(cm.exportCrate()["@graph"]);
-    });
-    test("resolve entity associations", async () => {
-        crate = getBaseCrate();
-        crate["@graph"].push({
-            "@id": "./",
-            "@type": "Dataset",
-            name: "root dataset",
-            text: "something",
-        });
-        cm = new CrateManager({ crate });
-        let profile = await readJSON("./src/examples/profile/profile-with-resolve.json");
-
-        let entity: any = {
-            "@id": "#createAction1",
-            "@type": ["CreateAction"],
-            name: "A very long named create action to demonstrate what happens with display of long names",
-            object: { "@id": "#person2" },
-            participant: { "@id": "#participant1" },
-            agent: { "@id": "#agent1" },
-        };
-        let associations = cm.resolveLinkedEntityAssociations({ entity, profile });
-        expect(associations).toMatchObject([
-            {
-                property: "object",
-                "@id": "#person2",
-            },
-            {
-                property: "participant",
-                "@id": "#participant1",
-            },
-            {
-                property: "agent",
-                "@id": "#agent1",
-            },
-        ]);
-
-        entity = {
-            "@id": "#relationship",
-            "@type": ["Relationship", "RelatedEntity"],
-            source: [{ "@id": "#person1" }, { "@id": "#person2" }],
-            target: { "@id": "#thing1" } as any,
-        };
-        associations = cm.resolveLinkedEntityAssociations({ entity, profile });
-        expect(associations).toMatchObject([
-            {
-                property: "source",
-                "@id": "#person1",
-            },
-            {
-                property: "source",
-                "@id": "#person2",
-            },
-            {
-                property: "target",
-                "@id": "#thing1",
-            },
-        ]);
-    });
-    test(`context handling - pass in context to be used as is`, () => {
-        cm = new CrateManager({
-            crate,
-            context: "https://www.researchobject.org/ro-crate/1.1/context.jsonld",
-        });
-        let context = cm.getContext();
-        // console.log(context);
-        expect(context).toEqual(["https://www.researchobject.org/ro-crate/1.1/context.jsonld"]);
-
-        cm = new CrateManager({
-            crate,
-            context: ["https://www.researchobject.org/ro-crate/1.1/context.jsonld"],
-        });
-        context = cm.getContext();
-        expect(context).toEqual(["https://www.researchobject.org/ro-crate/1.1/context.jsonld"]);
-
-        cm = new CrateManager({
-            crate,
-            context: [
-                "https://w3id.org/ro/crate/1.1/context",
-                { foaf: "http://xmlns.com/foaf/0.1" },
-                { dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/" },
-            ],
-        });
-        context = cm.getContext();
-        expect(context).toEqual([
-            "https://w3id.org/ro/crate/1.1/context",
-            {
-                foaf: "http://xmlns.com/foaf/0.1",
-                dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-            },
-        ]);
-    });
-    test(`context handling - adding properties to the crate`, () => {
-        crate["@context"] = [
-            "https://w3id.org/ro/crate/1.1/context",
-            "https://my.domain.com/ontology",
-            { foaf: "http://xmlns.com/foaf/0.1/" },
-            { dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/" },
-            {
-                somePropertyInYourDomain:
-                    "https://your.domain/path/to/definition#somePropertyInYourDomain",
-            },
-        ];
-        let cm = new CrateManager({ crate });
-        let context = cm.getContext();
-        // console.log(context);
-        expect(context).toMatchObject([
-            "https://w3id.org/ro/crate/1.1/context",
-            "https://my.domain.com/ontology",
-            {
-                foaf: "http://xmlns.com/foaf/0.1/",
-                dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-                somePropertyInYourDomain:
-                    "https://your.domain/path/to/definition#somePropertyInYourDomain",
-            },
-        ]);
-
-        // property already defined in context - not added
-        cm.setProperty({
-            id: "./",
-            property: "model",
-            propertyId: "http://schema.org/Person",
-            value: { "@id": "#model" },
-        });
-        context = cm.getContext();
-        // console.log(context);
-        expect(context).toMatchObject([
-            "https://w3id.org/ro/crate/1.1/context",
-            "https://my.domain.com/ontology",
-            {
-                foaf: "http://xmlns.com/foaf/0.1/",
-                dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-                somePropertyInYourDomain:
-                    "https://your.domain/path/to/definition#somePropertyInYourDomain",
-            },
-        ]);
-
-        // property not defined - is added
-        cm.setProperty({
-            id: "./",
-            property: "model",
-            propertyId: "http://www.w3.org/ns/prov#actedOnBehalfOf",
-            value: { "@id": "#model" },
-        });
-        context = cm.getContext();
-        // console.log(context);
-        expect(context).toMatchObject([
-            "https://w3id.org/ro/crate/1.1/context",
-            "https://my.domain.com/ontology",
-            {
-                foaf: "http://xmlns.com/foaf/0.1/",
-                dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-                somePropertyInYourDomain:
-                    "https://your.domain/path/to/definition#somePropertyInYourDomain",
-                model: "http://www.w3.org/ns/prov#actedOnBehalfOf",
-            },
-        ]);
-
-        // property now defined - not re-added
-        cm.setProperty({
-            id: "./",
-            property: "model",
-            propertyId: "http://www.w3.org/ns/prov#actedOnBehalfOf",
-            value: { "@id": "#model" },
-        });
-        context = cm.getContext();
-        expect(context).toMatchObject([
-            "https://w3id.org/ro/crate/1.1/context",
-            "https://my.domain.com/ontology",
-            {
-                foaf: "http://xmlns.com/foaf/0.1/",
-                dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-                somePropertyInYourDomain:
-                    "https://your.domain/path/to/definition#somePropertyInYourDomain",
-                model: "http://www.w3.org/ns/prov#actedOnBehalfOf",
-            },
-        ]);
-
-        let ec = cm.exportCrate();
-        // console.log(JSON.stringify(ec, null, 2));
-        expect(ec).toMatchObject({
-            "@context": [
-                "https://w3id.org/ro/crate/1.1/context",
-                "https://my.domain.com/ontology",
-                {
-                    foaf: "http://xmlns.com/foaf/0.1/",
-                    dcterms: "https://www.dublincore.org/specifications/dublin-core/dcmi-terms/",
-                    somePropertyInYourDomain:
-                        "https://your.domain/path/to/definition#somePropertyInYourDomain",
-                    model: "http://www.w3.org/ns/prov#actedOnBehalfOf",
-                },
-            ],
-            "@graph": [
-                {
-                    "@id": "ro-crate-metadata.json",
-                },
-                {
-                    "@id": "./",
-                    "@type": "Dataset",
-                    model: {
-                        "@id": "#model",
-                    },
-                },
-            ],
-        });
-    });
-    test(`storing / removing entity types for lookups`, () => {
-        let cm = new CrateManager({ crate });
-
-        expect(cm.entityTypes).toEqual({ CreativeWork: 1, Dataset: 1 });
-        expect(cm.getEntityTypes()).toEqual(["CreativeWork", "Dataset"]);
-
-        let entity = {
-            "@id": "file1.jpg",
-            "@type": "File",
-            name: "file1.jpg",
-        };
-        let r = cm.addEntity(entity);
-        expect(cm.getEntityTypes()).toEqual(["CreativeWork", "Dataset", "File"]);
-
-        cm.updateProperty({ id: r["@id"], property: "@type", idx: 0, value: "Cow" });
-        expect(cm.getEntityTypes()).toEqual(["Cow", "CreativeWork", "Dataset"]);
-
-        cm.deleteEntity({ id: r["@id"] });
-        expect(cm.getEntityTypes()).toEqual(["CreativeWork", "Dataset"]);
-    });
-    test("test creating blank nodes", () => {
-        let cm = new CrateManager({ crate });
-
-        let e = cm.addBlankNode("Relationship");
-        expect(e).toEqual({
-            "@id": "_:Relationship1",
-            "@type": ["Relationship"],
-            name: "_:Relationship1",
-        });
-
-        e = cm.addBlankNode("Relationship");
-        expect(e).toEqual({
-            "@id": "_:Relationship2",
-            "@type": ["Relationship"],
-            name: "_:Relationship2",
-        });
-
-        e = cm.addBlankNode("GeoShape");
-        expect(e).toEqual({
-            "@id": "_:GeoShape1",
-            "@type": ["GeoShape"],
-            name: "_:GeoShape1",
-        });
-
-        e = cm.addBlankNode("CreateAction");
-        expect(e).toEqual({
-            "@id": "_:CreateAction1",
-            "@type": ["CreateAction"],
-            name: "_:CreateAction1",
-        });
-
-        // ensure we don't clash with pre-existing blank nodes
-        e = cm.addBlankNode("Relationship");
-        expect(e).toMatchObject({
-            "@id": "_:Relationship3",
-            "@type": ["Relationship"],
-            name: "_:Relationship3",
-        });
-    });
-    test(`test locating entities - strict matching`, () => {
-        let cm = new CrateManager({ crate });
-
-        const r1 = cm.addBlankNode("Relationship");
-        const r2 = cm.addBlankNode("Relationship");
-        const e1 = cm.addEntity({ "@id": "/a/b/file1.txt", "@type": "File", name: "/file1.txt" });
-        const e2 = cm.addEntity({ "@id": "/file2.txt", "@type": "File", name: "/file2.txt" });
-        const e3 = cm.addFile("/a/c/d/file.png");
-        const e4 = cm.addFile("/a/c/d/file with spaces.png");
-
-        // link e1 and e2 entities to r1
-        cm.linkEntity({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e1["@id"] },
-        });
-
-        cm.linkEntity({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e2["@id"] },
-        });
-
-        // link all of the entities to r2
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e2["@id"] },
-        });
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e3["@id"] },
-        });
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e4["@id"] },
-        });
-
-        // console.log(JSON.stringify(cm.exportCrate()["@graph"], null, 2));
-
-        // won't find a matching entity
-        let matches = cm.locateEntity({ entityIds: ["file1.txt", "/file2.txt"] });
-        expect(matches).toEqual(undefined);
-
-        // will not find a matching entity - not an exact match
-        matches = cm.locateEntity({ entityIds: ["/file1.txt"] });
-        expect(matches).toEqual(undefined);
-
-        // will find a matching entity - an exact match
-        matches = cm.locateEntity({ entityIds: ["/a/b/file1.txt", "/file2.txt"] });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship1",
-                "@type": ["Relationship"],
-                name: "_:Relationship1",
-            },
-        ]);
-
-        // will find a matching entity - an exact match
-        matches = cm.locateEntity({ entityIds: ["/file2.txt", "/a/b/file1.txt"] });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship1",
-                "@type": ["Relationship"],
-                name: "_:Relationship1",
-            },
-        ]);
-
-        // will not find a matching entity - no match
-        matches = cm.locateEntity({ entityIds: ["/file2.pdf", "/file1.txt"] });
-        expect(matches).toEqual(undefined);
-
-        // will find a matching entity - an exact match
-        matches = cm.locateEntity({
-            entityIds: ["a/c/d/file.png", "/file2.txt", "a/c/d/file with spaces.png"],
-        });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship2",
-                "@type": ["Relationship"],
-                name: "_:Relationship2",
-            },
-        ]);
-
-        matches = cm.locateEntity({
-            entityIds: ["/file2.txt", "a/c/d/file.png", "a/c/d/file with spaces.png"],
-        });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship2",
-                "@type": ["Relationship"],
-                name: "_:Relationship2",
-            },
-        ]);
-
-        matches = cm.locateEntity({
-            entityIds: ["/file2.txt", "a/c/d/file.png", "a/c/d/file with spaces.png"],
-        });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship2",
-                "@type": ["Relationship"],
-                name: "_:Relationship2",
-            },
-        ]);
-    });
-    test(`test locating entities - subset matching`, () => {
-        let cm = new CrateManager({ crate });
-
-        const r1 = cm.addBlankNode("Relationship");
-        const r2 = cm.addBlankNode("Relationship");
-        const e1 = cm.addEntity({ "@id": "/a/b/file1.txt", "@type": "File", name: "/file1.txt" });
-        const e2 = cm.addEntity({ "@id": "/file2.txt", "@type": "File", name: "/file2.txt" });
-        const e3 = cm.addFile("/a/c/d/file.png");
-        const e4 = cm.addFile("/a/c/d/file with spaces.png");
-
-        // link e1 and e2 entities to r1
-        cm.linkEntity({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e1["@id"] },
-        });
-
-        cm.linkEntity({
-            id: r1["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e2["@id"] },
-        });
-
-        // link e2, e3 and e4 to r2
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e2["@id"] },
-        });
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e3["@id"] },
-        });
-        cm.linkEntity({
-            id: r2["@id"],
-            property: "object",
-            propertyId: "https://schema.org/object",
-            value: { "@id": e4["@id"] },
-        });
-
-        // console.log(JSON.stringify(cm.exportCrate()["@graph"], null, 2));
-
-        // won't find a matching entity
-        let matches = cm.locateEntity({ entityIds: ["file1.txt", "/file2.txt"] });
-        expect(matches).toEqual(undefined);
-
-        // will find a matching entity - subset match
-        matches = cm.locateEntity({ entityIds: ["/file2.txt"], strict: false });
-        expect(matches).toMatchObject([{ "@id": "_:Relationship1" }, { "@id": "_:Relationship2" }]);
-
-        // will find a matching entity - an exact match
-        matches = cm.locateEntity({ entityIds: ["/a/b/file1.txt", "/file2.txt"], strict: false });
-        expect(matches).toMatchObject([
-            {
-                "@id": "_:Relationship1",
-            },
-        ]);
-    });
-    test("add files and folders to the crate", () => {
-        let e = cm.addFile("/file.txt");
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file.txt", "@type": "File" },
-        ]);
-        expect(e).toEqual({ "@id": "file.txt", "@type": ["File"], name: "file.txt" });
-
-        e = cm.addFolder("images");
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file.txt", "@type": "File" },
-            { "@id": "images/", "@type": "Dataset" },
-        ]);
-        expect(e).toEqual({ "@id": "images/", "@type": ["Dataset"], name: "images/" });
-
-        cm.addFile("/folder/file.txt");
-        // console.log(cm.exportCrate()["@graph"]);
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file.txt", "@type": "File" },
-            { "@id": "images/", "@type": "Dataset" },
-            { "@id": "folder/", "@type": "Dataset" },
-            { "@id": "folder/file.txt", "@type": "File" },
-        ]);
-
-        cm.addFile("/a/b/c/d/file.png");
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file.txt", "@type": "File" },
-            { "@id": "images/", "@type": "Dataset" },
-            { "@id": "folder/", "@type": "Dataset" },
-            { "@id": "folder/file.txt", "@type": "File" },
-            { "@id": "a/", "@type": "Dataset" },
-            { "@id": "a/b/", "@type": "Dataset" },
-            { "@id": "a/b/c/", "@type": "Dataset" },
-            { "@id": "a/b/c/d/", "@type": "Dataset" },
-            { "@id": "a/b/c/d/file.png", "@type": "File" },
-        ]);
-
-        e = cm.addFolder("/a/j/f/g");
-        // console.log(JSON.ddstringify(cm.exportCrate()["@graph"], null, 2));
-        expect(cm.exportCrate()["@graph"]).toMatchObject([
-            { "@id": "ro-crate-metadata.json" },
-            { "@id": "./" },
-            { "@id": "file.txt", "@type": "File" },
-            { "@id": "images/", "@type": "Dataset" },
-            { "@id": "folder/", "@type": "Dataset" },
-            { "@id": "folder/file.txt", "@type": "File" },
-            { "@id": "a/", "@type": "Dataset" },
-            { "@id": "a/b/", "@type": "Dataset" },
-            { "@id": "a/b/c/", "@type": "Dataset" },
-            { "@id": "a/b/c/d/", "@type": "Dataset" },
-            { "@id": "a/b/c/d/file.png", "@type": "File" },
-            { "@id": "a/j/", "@type": "Dataset" },
-            { "@id": "a/j/f/", "@type": "Dataset" },
-            { "@id": "a/j/f/g/", "@type": "Dataset" },
-        ]);
-        expect(e).toEqual({ "@id": "a/j/f/g/", "@type": ["Dataset"], name: "a/j/f/g/" });
-    });
-});
-
-function getBaseCrate(): UnverifiedCrate {
-    return {
-        "@context": ["https://w3id.org/ro/crate/1.1/context"],
-        "@graph": [
-            {
-                "@id": "ro-crate-metadata.json",
-                "@type": "CreativeWork",
-                conformsTo: {
-                    "@id": "https://w3id.org/ro/crate/1.1/context",
-                },
-                about: {
-                    "@id": "./",
-                },
-            },
-        ],
-    };
-}
-
-function addRootDataset({ crate }: { crate: UnverifiedCrate }) {
-    crate["@graph"].push({
-        "@id": "./",
-        "@type": "Dataset",
-        name: "Dataset",
-    });
-    return crate;
-}