@aroman22/codegraph-vba-darwin-arm64 1.5.2 → 1.6.0

package/lib/dist/mcp/liveness-watchdog.js

@@ -33,7 +33,7 @@ var __importStar = (this && this.__importStar) || (function () {
     };
 })();
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.DEFAULT_WATCHDOG_TIMEOUT_MS = void 0;
+exports.PROGRESS_CAP_MULTIPLIER = exports.DEFAULT_WATCHDOG_TIMEOUT_MS = void 0;
 exports.parseWatchdogTimeoutMs = parseWatchdogTimeoutMs;
 exports.deriveCheckIntervalMs = deriveCheckIntervalMs;
 exports.installMainThreadWatchdog = installMainThreadWatchdog;
@@ -68,16 +68,39 @@ exports.installMainThreadWatchdog = installMainThreadWatchdog;
  * orphan).
  *
  * **Won't fire on real work.** Heavy parsing runs in the parse worker
- * (off-thread) and indexing shells out to a child process, so the daemon's main
- * thread only ever does fast, bounded work. The default timeout is ~300× the
- * 5h #850 wedge shorter, yet far longer than any legitimate main-thread block.
- * Opt out with `CODEGRAPH_NO_WATCHDOG=1`; tune with `CODEGRAPH_WATCHDOG_TIMEOUT_MS`.
+ * (off-thread) and the daemon's indexing shells out to a child process, so the
+ * daemon's main thread only ever does fast, bounded work. The default timeout
+ * is ~300× the 5h #850 wedge shorter, yet far longer than any legitimate
+ * main-thread block. Opt out with `CODEGRAPH_NO_WATCHDOG=1`; tune with
+ * `CODEGRAPH_WATCHDOG_TIMEOUT_MS`.
+ *
+ * **Disk-progress deferral (`progressPaths`).** The CLI `index`/`init` path is
+ * different: it runs the SQLite store on this thread, and one long synchronous
+ * statement on severely degraded storage can block the loop past the timeout
+ * with the process perfectly healthy (#1231: killed a valid index on a
+ * 150-IOPS disk). Heartbeat silence alone cannot tell that apart from a wedge —
+ * but the disk can: a wedged CPU loop makes no forward progress on the DB
+ * files, while a slow store advances them. When the caller supplies
+ * `progressPaths` (the SQLite DB + `-wal`), the child checks them at each
+ * silent timeout: size/mtime advanced ⇒ defer the kill and keep watching;
+ * unchanged ⇒ kill as before. Deferral is bounded by a hard cap
+ * (`PROGRESS_CAP_MULTIPLIER` × timeout) of continuous silence, so a wedge
+ * coinciding with unrelated file activity — or I/O hung beyond all reason —
+ * still dies. A true wedge with no disk progress dies at the base timeout,
+ * exactly as before.
  */
 const fs = __importStar(require("fs"));
 const os = __importStar(require("os"));
 const child_process_1 = require("child_process");
 /** Default: 60s — ~300× shorter than the 5h #850 wedge, far longer than any real main-thread block. */
 exports.DEFAULT_WATCHDOG_TIMEOUT_MS = 60_000;
+/**
+ * Hard cap on disk-progress deferral: after this many timeouts' worth of
+ * CONTINUOUS heartbeat silence the process is killed even if the watched files
+ * keep advancing (a wedge coinciding with unrelated file writes, or I/O hung
+ * beyond any legitimate statement). 10× the 60s default ⇒ 10 minutes.
+ */
+exports.PROGRESS_CAP_MULTIPLIER = 10;
 /** `true` for `1/true/yes/on` (case-insensitive); `false` otherwise. */
 function isEnvTruthy(raw) {
     if (!raw)
@@ -115,15 +138,50 @@ const CHILD_SOURCE = `
 const fs = require('fs');
 const parentPid = Number(process.argv[1]);
 const timeoutMs = Number(process.argv[2]);
+const capMs = Number(process.argv[3]);
+const progressPaths = process.argv.slice(4);
 const secs = Math.round(timeoutMs / 1000);
-const MSG = Buffer.from('[CodeGraph] Main thread unresponsive for ~' + secs + 's — killing the wedged process so a fresh one can start (#850). Disable with CODEGRAPH_NO_WATCHDOG=1.\\n');
-function kill() {
-  try { fs.writeSync(2, MSG); } catch (e) {}
+function kill(extra) {
+  try { fs.writeSync(2, Buffer.from('[CodeGraph] Main thread unresponsive for ~' + secs + 's' + (extra || '') + ' — killing the wedged process so a fresh one can start (#850). Disable with CODEGRAPH_NO_WATCHDOG=1.\\n')); } catch (e) {}
   try { process.kill(parentPid, 'SIGKILL'); } catch (e) {}
   process.exit(0);
 }
-let timer = setTimeout(kill, timeoutMs);
-process.stdin.on('data', () => { clearTimeout(timer); timer = setTimeout(kill, timeoutMs); });
+// Fingerprint of the watched files (size + mtime). A change between checks is
+// forward disk progress — a slow synchronous SQLite statement, not a wedge.
+function snap() {
+  let s = '';
+  for (const p of progressPaths) {
+    try { const st = fs.statSync(p); s += st.size + ':' + st.mtimeMs + ';'; } catch (e) { s += 'x;'; }
+  }
+  return s;
+}
+let lastSnap = progressPaths.length ? snap() : '';
+let lastSnapAt = Date.now();
+let silentSince = null; // start of the current continuous-silence episode
+function onTimeout() {
+  if (!progressPaths.length) return kill('');
+  const now = Date.now();
+  if (silentSince === null) silentSince = now - timeoutMs; // silence began ~one timeout ago
+  const cur = snap();
+  if (cur !== lastSnap && now - silentSince < capMs) {
+    // The event loop is blocked but the DB files are advancing: a legitimate
+    // long store on slow storage. Defer, re-baseline, keep watching.
+    lastSnap = cur;
+    timer = setTimeout(onTimeout, timeoutMs);
+    return;
+  }
+  kill(cur !== lastSnap ? ' despite ongoing disk activity (hard cap ' + Math.round(capMs / 1000) + 's reached)' : '');
+}
+let timer = setTimeout(onTimeout, timeoutMs);
+process.stdin.on('data', () => {
+  silentSince = null;
+  // Keep the baseline fresh while healthy (throttled — a stat per second).
+  if (progressPaths.length) {
+    const t = Date.now();
+    if (t - lastSnapAt >= 1000) { lastSnap = snap(); lastSnapAt = t; }
+  }
+  clearTimeout(timer); timer = setTimeout(onTimeout, timeoutMs);
+});
 process.stdin.on('end', () => process.exit(0));   // parent closed the pipe (exited) -> no orphan
 process.stdin.on('error', () => process.exit(0)); // pipe broke -> parent gone
 process.stdin.resume();
@@ -134,17 +192,19 @@ process.stdin.resume();
  * (degraded, never throws — a missing watchdog must never keep a process from
  * starting).
  */
-function installMainThreadWatchdog() {
+function installMainThreadWatchdog(options = {}) {
     if (isEnvTruthy(process.env.CODEGRAPH_NO_WATCHDOG))
         return null;
     const timeoutMs = parseWatchdogTimeoutMs(process.env.CODEGRAPH_WATCHDOG_TIMEOUT_MS);
     const checkMs = deriveCheckIntervalMs(timeoutMs);
+    const capMs = timeoutMs * exports.PROGRESS_CAP_MULTIPLIER;
+    const progressPaths = options.progressPaths ?? [];
     let child;
     try {
         // No execArgv inheritance (unlike Worker), so the child carries none of our
         // V8 flags — it runs no WASM and needs none. stderr inherits the parent's
         // fd 2 so the kill notice lands wherever the parent logs (daemon.log).
-        child = (0, child_process_1.spawn)(process.execPath, ['-e', CHILD_SOURCE, String(process.pid), String(timeoutMs)], {
+        child = (0, child_process_1.spawn)(process.execPath, ['-e', CHILD_SOURCE, String(process.pid), String(timeoutMs), String(capMs), ...progressPaths], {
             stdio: ['pipe', 'ignore', 'inherit'],
             windowsHide: true,
             // The watchdog touches no files; keep its cwd off the project/temp dir
@@ -185,7 +245,7 @@ function installMainThreadWatchdog() {
         stdin.unref?.();
     }
     catch { /* ignore */ }
-    debug(`armed (child pid ${child.pid ?? '?'}): timeoutMs=${timeoutMs} checkMs=${checkMs}`);
+    debug(`armed (child pid ${child.pid ?? '?'}): timeoutMs=${timeoutMs} checkMs=${checkMs} progressPaths=${progressPaths.length}`);
     let stopped = false;
     return {
         stop() {

package/lib/dist/mcp/liveness-watchdog.js.map

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package/lib/dist/mcp/proxy.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"proxy.d.ts","sourceRoot":"","sources":["../../src/mcp/proxy.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;GAkBG;AAGH,OAAO,KAAK,GAAG,MAAM,KAAK,CAAC;AAE3B,OAAO,EAAqB,WAAW,EAAwB,MAAM,UAAU,CAAC;AAUhF,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAc1C;;;GAGG;AACH,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,MAAM,EAAE,KAAK,EAAE,WAAW,GAAG,IAAI,CAK9E;AAED,MAAM,WAAW,WAAW;IAC1B;;;;;OAKG;IACH,OAAO,EAAE,SAAS,GAAG,iBAAiB,CAAC;IACvC,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,QAAQ,CAC5B,UAAU,EAAE,MAAM,EAClB,eAAe,GAAE,MAAgC,GAChD,OAAO,CAAC,WAAW,CAAC,CAqCtB;AAED;;;;;GAKG;AACH,wBAAsB,gBAAgB,CACpC,UAAU,EAAE,MAAM,EAClB,eAAe,GAAE,MAAgC,GAChD,OAAO,CAAC,GAAG,CAAC,MAAM,GAAG,kBAAkB,GAAG,IAAI,CAAC,CAgCjD;AAsBD;+DAC+D;AAC/D,MAAM,WAAW,kBAAkB;IACjC;yFACqF;IACrF,eAAe,IAAI,OAAO,CAAC,GAAG,CAAC,MAAM,GAAG,IAAI,CAAC,CAAC;IAC9C;6EACyE;IACzE,UAAU,IAAI,SAAS,CAAC;IACxB,wDAAwD;IACxD,IAAI,EAAE,MAAM,CAAC;CACd;AAED;;;;;;;;;;;;GAYG;AACH,wBAAsB,sBAAsB,CAAC,IAAI,EAAE,kBAAkB,GAAG,OAAO,CAAC,IAAI,CAAC,CAoMpF"}

package/lib/dist/mcp/proxy.js

@@ -60,7 +60,9 @@ const fs = __importStar(require("fs"));
 const net = __importStar(require("net"));
 const wasm_runtime_flags_1 = require("../extraction/wasm-runtime-flags");
 const daemon_1 = require("./daemon");
+const early_ppid_1 = require("./early-ppid");
 const ppid_watchdog_1 = require("./ppid-watchdog");
+const startup_handshake_1 = require("./startup-handshake");
 const stdin_teardown_1 = require("./stdin-teardown");
 const version_1 = require("./version");
 const session_1 = require("./session");
@@ -183,7 +185,7 @@ function sendClientHello(socket) {
     const clientHello = {
         codegraph_client: 1,
         pid: process.pid,
-        hostPid: parseHostPpid(process.env[wasm_runtime_flags_1.HOST_PPID_ENV]) ?? process.ppid,
+        hostPid: parseHostPpid(process.env[wasm_runtime_flags_1.HOST_PPID_ENV]) ?? early_ppid_1.EARLY_PPID,
     };
     try {
         socket.write(JSON.stringify(clientHello) + '\n');
@@ -291,6 +293,8 @@ async function runLocalHandshakeProxy(deps) {
     const routeToDaemon = (line) => {
         if (daemonStatus === 'ready' && daemonSocket) {
             trackInflight(line);
+            if (process.env.CODEGRAPH_MCP_DEBUG)
+                process.stderr.write(`[mcp-debug] proxy->daemon ${line.slice(0, 80)}\n`);
             try {
                 daemonSocket.write(line.endsWith('\n') ? line : line + '\n');
             }
@@ -300,6 +304,8 @@ async function runLocalHandshakeProxy(deps) {
             void handleLocally(line);
         }
         else {
+            if (process.env.CODEGRAPH_MCP_DEBUG)
+                process.stderr.write(`[mcp-debug] proxy-buffer(${daemonStatus}) ${line.slice(0, 80)}\n`);
             pending.push(line);
         }
     };
@@ -331,7 +337,7 @@ async function runLocalHandshakeProxy(deps) {
                         version: typeof initParams.clientInfo.version === 'string' ? initParams.clientInfo.version : undefined,
                     };
                 }
-                writeClient({ jsonrpc: '2.0', id: msg.id, result: { protocolVersion: session_1.PROTOCOL_VERSION, capabilities: { tools: {} }, serverInfo: session_1.SERVER_INFO, instructions: server_instructions_1.SERVER_INSTRUCTIONS } });
+                writeClient({ jsonrpc: '2.0', id: msg.id, result: { protocolVersion: session_1.PROTOCOL_VERSION, capabilities: { tools: {} }, serverInfo: session_1.SERVER_INFO, instructions: (0, session_1.initializeInstructions)(server_instructions_1.SERVER_INSTRUCTIONS) } });
                 routeToDaemon(line); // prime the daemon so it resolves the project (its reply is suppressed below)
             }
             else if (msg.method === 'tools/list') {
@@ -359,6 +365,16 @@ async function runLocalHandshakeProxy(deps) {
     // busy-spinning the event loop (#799).
     (0, stdin_teardown_1.treatStdinFailureAsShutdown)(shutdown);
     startPpidWatchdogNoSocket(shutdown);
+    // Backstop for a launch abandoned before any of the above can see it: killed
+    // launcher + held-open pipes + reparent that beat the EARLY_PPID capture
+    // (#1185). A server that never receives a single byte isn't serving anyone.
+    // Armed after the stdin 'data' consumer above so no bytes are emitted while
+    // only the backstop's listener exists.
+    (0, startup_handshake_1.armStartupHandshakeTimeout)(() => {
+        process.stderr.write('[CodeGraph MCP] No MCP traffic since startup; assuming an abandoned launch and shutting down (#1185). ' +
+            'Tune with CODEGRAPH_STARTUP_HANDSHAKE_TIMEOUT_MS (0 disables).\n');
+        shutdown();
+    });
     // ---- daemon connection (background) ----
     let socket = null;
     try {
@@ -388,6 +404,8 @@ async function runLocalHandshakeProxy(deps) {
                     resp = JSON.parse(line);
                 }
                 catch { /* not JSON — relay verbatim */ }
+                if (process.env.CODEGRAPH_MCP_DEBUG)
+                    process.stderr.write(`[mcp-debug] daemon->proxy ${line.slice(0, 80)}\n`);
                 if (resp && resp.id !== undefined && ('result' in resp || 'error' in resp)) {
                     inflight.delete(resp.id); // answered — no longer in flight
                     // Suppress the daemon's reply to the initialize we forwarded to prime it
@@ -422,6 +440,8 @@ async function runLocalHandshakeProxy(deps) {
         socket.on('error', onDaemonLost);
         for (const line of pending) {
             trackInflight(line);
+            if (process.env.CODEGRAPH_MCP_DEBUG)
+                process.stderr.write(`[mcp-debug] proxy-flush ${line.slice(0, 80)}\n`);
             try {
                 socket.write(line + '\n');
             }
@@ -445,7 +465,10 @@ function startPpidWatchdogNoSocket(onDeath) {
     const pollMs = parsePollMs(process.env.CODEGRAPH_PPID_POLL_MS);
     if (pollMs <= 0)
         return;
-    const originalPpid = process.ppid;
+    // Baseline from the CLI entry's earliest capture, not process.ppid here —
+    // a launcher killed during our first ~100ms would otherwise leave the
+    // baseline at 1 and blind the divergence check forever (#1185).
+    const originalPpid = early_ppid_1.EARLY_PPID;
     const hostPpid = parseHostPpid(process.env[wasm_runtime_flags_1.HOST_PPID_ENV]);
     const timer = setInterval(() => {
         const reason = (0, ppid_watchdog_1.supervisionLostReason)({
@@ -588,7 +611,10 @@ function startPpidWatchdog(socket) {
     const pollMs = parsePollMs(process.env.CODEGRAPH_PPID_POLL_MS);
     if (pollMs <= 0)
         return;
-    const originalPpid = process.ppid;
+    // Baseline from the CLI entry's earliest capture, not process.ppid here —
+    // a launcher killed during our first ~100ms would otherwise leave the
+    // baseline at 1 and blind the divergence check forever (#1185).
+    const originalPpid = early_ppid_1.EARLY_PPID;
     const hostPpid = parseHostPpid(process.env[wasm_runtime_flags_1.HOST_PPID_ENV]);
     const timer = setInterval(() => {
         const reason = (0, ppid_watchdog_1.supervisionLostReason)({

package/lib/dist/mcp/proxy.js.map

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package/lib/dist/mcp/query-pool.d.ts

@@ -81,6 +81,20 @@ export declare class QueryPool {
      * degrades to today's behavior instead of failing tool calls.
      */
     get healthy(): boolean;
+    /**
+     * True once at least one worker has completed its cold start (posted the
+     * 'ready' handshake). Until then the ToolHandler serves calls IN-PROCESS:
+     * a worker cold start is a full module load + DB open — seconds normally,
+     * tens of seconds on a loaded machine — and a call queued behind it gets
+     * nothing until the 45s busy backstop. The daemon's very first tool call
+     * hitting that window was the recurring #662 test flake (and a real
+     * first-call stall for agents). The pool exists for CONCURRENT load, which
+     * by definition arrives after warm-up; the pre-pool in-process path is
+     * strictly better while nothing is warm. Stays true for the pool's
+     * lifetime — later crash-respawn gaps are covered by retry + backstop.
+     */
+    get ready(): boolean;
+    private everReady;
     private spawnOne;
     private onMessage;
     private onWorkerGone;

package/lib/dist/mcp/query-pool.d.ts.map

@@ -1 +1 @@
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package/lib/dist/mcp/query-pool.js

@@ -160,6 +160,22 @@ class QueryPool {
     get healthy() {
         return !this.destroyed && this.totalCrashes < CRASH_BUDGET;
     }
+    /**
+     * True once at least one worker has completed its cold start (posted the
+     * 'ready' handshake). Until then the ToolHandler serves calls IN-PROCESS:
+     * a worker cold start is a full module load + DB open — seconds normally,
+     * tens of seconds on a loaded machine — and a call queued behind it gets
+     * nothing until the 45s busy backstop. The daemon's very first tool call
+     * hitting that window was the recurring #662 test flake (and a real
+     * first-call stall for agents). The pool exists for CONCURRENT load, which
+     * by definition arrives after warm-up; the pre-pool in-process path is
+     * strictly better while nothing is warm. Stays true for the pool's
+     * lifetime — later crash-respawn gaps are covered by retry + backstop.
+     */
+    get ready() {
+        return this.everReady && !this.destroyed;
+    }
+    everReady = false;
     spawnOne() {
         if (this.destroyed || this.workers.size >= this.maxSize)
             return;
@@ -185,6 +201,8 @@ class QueryPool {
             this.pendingWorkers.delete(w);
             if (m.ok === false)
                 this.totalCrashes++; // hard open failure
+            else
+                this.everReady = true;
             this.idle.push(w);
             this.drain();
             return;

package/lib/dist/mcp/query-pool.js.map

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+{"version":3,"file":"query-pool.js","sourceRoot":"","sources":["../../src/mcp/query-pool.ts"],"names":[],"mappings":";AAAA;;;;;;;;;;;;;;;;;;;;;;;GAuBG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAuFH,0CAOC;AA5FD,mDAAwC;AACxC,2CAA6B;AAC7B,uCAAyB;AAGzB,mFAAmF;AACnF,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,iBAAiB,CAAC,CAAC;AAgB5D,0EAA0E;AAC1E,MAAM,uBAAuB,GAAG,MAAM,CAAC,CAAC,wCAAwC;AAEhF,gEAAgE;AAChE,MAAM,aAAa,GAAG,EAAE,CAAC;AAEzB;;;;;GAKG;AACH,MAAM,YAAY,GAAG,EAAE,CAAC;AAExB;;;;;;;GAOG;AACH,MAAM,oBAAoB,GAAG,CAAC,CAAC;AAkC/B;;;;;;GAMG;AACH,SAAgB,eAAe,CAAC,MAA0B,EAAE,QAAgB;IAC1E,IAAI,MAAM,KAAK,SAAS,IAAI,MAAM,KAAK,EAAE,EAAE,CAAC;QAC1C,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC;QACzB,IAAI,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC;YAAE,OAAO,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC;QAChF,uDAAuD;IACzD,CAAC;IACD,OAAO,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,QAAQ,GAAG,CAAC,EAAE,aAAa,CAAC,CAAC,CAAC;AAC5D,CAAC;AAED,SAAS,oBAAoB;IAC3B,MAAM,GAAG,GAAG,OAAO,CAAC,GAAG,CAAC,+BAA+B,CAAC;IACxD,IAAI,GAAG,KAAK,SAAS,IAAI,GAAG,KAAK,EAAE;QAAE,OAAO,uBAAuB,CAAC;IACpE,MAAM,CAAC,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC;IACtB,IAAI,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,IAAI;QAAE,OAAO,uBAAuB,CAAC;IACpE,OAAO,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;AACvB,CAAC;AAED,mFAAmF;AACnF,SAAS,YAAY,CAAC,QAAgB;IACpC,MAAM,IAAI,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,QAAQ,GAAG,IAAI,CAAC,CAAC,CAAC;IACtD,OAAO;QACL,OAAO,EAAE,CAAC;gBACR,IAAI,EAAE,MAAM;gBACZ,IAAI,EACF,mFAAmF,IAAI,mBAAmB;oBAC1G,sHAAsH;oBACtH,oEAAoE;aACvE,CAAC;KACH,CAAC;AACJ,CAAC;AAED,MAAa,SAAS;IACZ,IAAI,GAAiB,EAAE,CAAC;IACxB,KAAK,GAAU,EAAE,CAAC;IAClB,QAAQ,GAAG,IAAI,GAAG,EAAmB,CAAC;IACtC,OAAO,GAAG,IAAI,GAAG,EAAc,CAAC;IACxC,2EAA2E;IAC3E,4EAA4E;IAC5E,8EAA8E;IAC9E,6EAA6E;IAC7E,sCAAsC;IAC9B,cAAc,GAAG,IAAI,GAAG,EAAc,CAAC;IACvC,MAAM,GAAG,CAAC,CAAC;IACX,YAAY,GAAG,CAAC,CAAC;IACjB,SAAS,GAAG,KAAK,CAAC;IACT,IAAI,CAAS;IACb,OAAO,CAAS;IAChB,aAAa,CAAS;IACtB,UAAU,CAAS;IACnB,YAAY,CAAmB;IAEhD,YAAY,IAAsB;QAChC,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC;QACtB,IAAI,CAAC,OAAO,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,EAAE,CAAC,IAAI,EAAE,CAAC,MAAM,GAAG,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC,CAAC;QACpG,IAAI,CAAC,aAAa,GAAG,IAAI,CAAC,aAAa,IAAI,oBAAoB,EAAE,CAAC;QAClE,IAAI,CAAC,UAAU,GAAG,IAAI,CAAC,UAAU,IAAI,CAAC,CAAC;QACvC,IAAI,CAAC,YAAY,GAAG,IAAI,CAAC,YAAY,IAAI,CAAC,GAAG,EAAE,CAAC,IAAI,uBAAM,CAAC,WAAW,EAAE,EAAE,UAAU,EAAE,EAAE,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,CAAC;QAC9G,IAAI,CAAC,QAAQ,EAAE,CAAC,CAAC,kDAAkD;IACrE,CAAC;IAED,0CAA0C;IAC1C,IAAI,IAAI,KAAa,OAAO,IAAI,CAAC,OAAO,CAAC,CAAC,CAAC;IAE3C,4CAA4C;IAC5C,IAAI,WAAW,KAAa,OAAO,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC;IAEvD;;;;OAIG;IACH,IAAI,OAAO;QACT,OAAO,CAAC,IAAI,CAAC,SAAS,IAAI,IAAI,CAAC,YAAY,GAAG,YAAY,CAAC;IAC7D,CAAC;IAED;;;;;;;;;;;OAWG;IACH,IAAI,KAAK;QACP,OAAO,IAAI,CAAC,SAAS,IAAI,CAAC,IAAI,CAAC,SAAS,CAAC;IAC3C,CAAC;IACO,SAAS,GAAG,KAAK,CAAC;IAElB,QAAQ;QACd,IAAI,IAAI,CAAC,SAAS,IAAI,IAAI,CAAC,OAAO,CAAC,IAAI,IAAI,IAAI,CAAC,OAAO;YAAE,OAAO;QAChE,IAAI,CAAa,CAAC;QAClB,IAAI,CAAC;YACH,CAAC,GAAG,IAAI,CAAC,YAAY,EAAE,CAAC;QAC1B,CAAC;QAAC,MAAM,CAAC;YACP,IAAI,CAAC,YAAY,EAAE,CAAC,CAAC,oCAAoC;YACzD,OAAO;QACT,CAAC;QACD,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QACpB,IAAI,CAAC,cAAc,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QAC3B,CAAC,CAAC,EAAE,CAAC,SAAS,EAAE,CAAC,CAAC,EAAE,EAAE,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,CAAkB,CAAC,CAAC,CAAC;QACtE,CAAC,CAAC,EAAE,CAAC,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC;QAC1C,CAAC,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,IAAI,EAAE,EAAE,GAAG,IAAI,IAAI,KAAK,CAAC;YAAE,IAAI,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IACpE,CAAC;IAEO,SAAS,CAAC,CAAa,EAAE,CAAgB;QAC/C,IAAI,CAAC,CAAC;YAAE,OAAO;QACf,IAAI,CAAC,CAAC,IAAI,KAAK,OAAO,EAAE,CAAC;YACvB,IAAI,CAAC,cAAc,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;YAC9B,IAAI,CAAC,CAAC,EAAE,KAAK,KAAK;gBAAE,IAAI,CAAC,YAAY,EAAE,CAAC,CAAC,oBAAoB;;gBACxD,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC;YAC3B,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAClB,IAAI,CAAC,KAAK,EAAE,CAAC;YACb,OAAO;QACT,CAAC;QACD,IAAI,CAAC,CAAC,IAAI,KAAK,QAAQ,EAAE,CAAC;YACxB,MAAM,GAAG,GAAG,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;YACjC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;YACxB,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAClB,IAAI,GAAG;gBAAE,IAAI,CAAC,MAAM,CAAC,GAAG,EAAE,CAAC,CAAC,MAAM,IAAI,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC;YACvD,IAAI,CAAC,KAAK,EAAE,CAAC;QACf,CAAC;IACH,CAAC;IAED,+EAA+E;IAC/E,wEAAwE;IACxE,gDAAgD;IACxC,YAAY,CAAC,CAAa;QAChC,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC;YAAE,OAAO,CAAC,yCAAyC;QAC3E,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;QACvB,IAAI,CAAC,cAAc,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;QAC9B,IAAI,CAAC,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC;QAC7C,IAAI,CAAC,YAAY,EAAE,CAAC;QACpB,MAAM,GAAG,GAAG,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;QACjC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;QACxB,IAAI,CAAC;YAAC,KAAK,CAAC,CAAC,SAAS,EAAE,CAAC;QAAC,CAAC;QAAC,MAAM,CAAC,CAAC,kBAAkB,CAAC,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package/lib/dist/mcp/session.d.ts

@@ -21,6 +21,20 @@ export declare const SERVER_INFO: {
     name: string;
     version: string;
 };
+/**
+ * Instructions for the `initialize` response, with the update-availability
+ * notice appended when one is known (#1243). Exported so the proxy's local
+ * handshake sends the IDENTICAL payload — same convention as SERVER_INFO.
+ * `getUpdateNotice` is a memoized synchronous cache read, so the #172
+ * respond-fast contract holds; when no notice exists the instructions are
+ * byte-identical to the bare constants.
+ *
+ * Test-authoring note: on a machine whose real `~/.codegraph` cache knows a
+ * newer release, spawned servers append the notice — a test asserting exact
+ * instructions equality must set `CODEGRAPH_NO_UPDATE_CHECK=1` in the spawn
+ * env or it will fail only in the weeks after a release ships.
+ */
+export declare function initializeInstructions(base: string, notice?: string | null): string;
 /** MCP Protocol Version (latest the server claims). */
 export declare const PROTOCOL_VERSION = "2024-11-05";
 export interface MCPSessionOptions {

package/lib/dist/mcp/session.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"session.d.ts","sourceRoot":"","sources":["../../src/mcp/session.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAGH,OAAO,EAAuC,gBAAgB,EAAc,MAAM,aAAa,CAAC;AAChG,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAOrC;;;GAGG;AAGH,eAAO,MAAM,WAAW;;;CAGvB,CAAC;AAEF,uDAAuD;AACvD,eAAO,MAAM,gBAAgB,eAAe,CAAC;AAmC7C,MAAM,WAAW,iBAAiB;IAChC;;;;OAIG;IACH,mBAAmB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CACrC;AAED;;;GAGG;AACH,qBAAa,UAAU;IASnB,OAAO,CAAC,SAAS;IACjB,OAAO,CAAC,MAAM;IAThB,OAAO,CAAC,mBAAmB,CAAS;IACpC,kFAAkF;IAClF,OAAO,CAAC,UAAU,CAAyB;IAC3C,OAAO,CAAC,cAAc,CAAS;IAC/B,OAAO,CAAC,cAAc,CAA8B;IACpD,OAAO,CAAC,mBAAmB,CAAgB;gBAGjC,SAAS,EAAE,gBAAgB,EAC3B,MAAM,EAAE,SAAS,EACzB,IAAI,GAAE,iBAAsB;IAK9B;;;OAGG;IACH,KAAK,IAAI,IAAI;IAIb;;;OAGG;IACH,IAAI,IAAI,IAAI;IAIZ,kEAAkE;IAClE,YAAY,IAAI,gBAAgB;YAIlB,aAAa;YA0Cb,gBAAgB;YA0DhB,eAAe;YAkBf,eAAe;IAiC7B;;;;;;;OAOG;YACW,iBAAiB;IAyB/B;;;OAGG;YACW,aAAa;CAgB5B"}
+{"version":3,"file":"session.d.ts","sourceRoot":"","sources":["../../src/mcp/session.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAGH,OAAO,EAAuC,gBAAgB,EAAc,MAAM,aAAa,CAAC;AAChG,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AAQrC;;;GAGG;AAGH,eAAO,MAAM,WAAW;;;CAGvB,CAAC;AAEF;;;;;;;;;;;;GAYG;AACH,wBAAgB,sBAAsB,CAAC,IAAI,EAAE,MAAM,EAAE,MAAM,GAAE,MAAM,GAAG,IAAwB,GAAG,MAAM,CAMtG;AAED,uDAAuD;AACvD,eAAO,MAAM,gBAAgB,eAAe,CAAC;AAmC7C,MAAM,WAAW,iBAAiB;IAChC;;;;OAIG;IACH,mBAAmB,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CACrC;AAED;;;GAGG;AACH,qBAAa,UAAU;IASnB,OAAO,CAAC,SAAS;IACjB,OAAO,CAAC,MAAM;IAThB,OAAO,CAAC,mBAAmB,CAAS;IACpC,kFAAkF;IAClF,OAAO,CAAC,UAAU,CAAyB;IAC3C,OAAO,CAAC,cAAc,CAAS;IAC/B,OAAO,CAAC,cAAc,CAA8B;IACpD,OAAO,CAAC,mBAAmB,CAAgB;gBAGjC,SAAS,EAAE,gBAAgB,EAC3B,MAAM,EAAE,SAAS,EACzB,IAAI,GAAE,iBAAsB;IAK9B;;;OAGG;IACH,KAAK,IAAI,IAAI;IAIb;;;OAGG;IACH,IAAI,IAAI,IAAI;IAIZ,kEAAkE;IAClE,YAAY,IAAI,gBAAgB;YAIlB,aAAa;YA0Cb,gBAAgB;YA0DhB,eAAe;YAkBf,eAAe;IAoC7B;;;;;;;OAOG;YACW,iBAAiB;IAyB/B;;;OAGG;YACW,aAAa;CAgB5B"}

package/lib/dist/mcp/session.js

@@ -47,6 +47,7 @@ var __importStar = (this && this.__importStar) || (function () {
 })();
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.MCPSession = exports.PROTOCOL_VERSION = exports.SERVER_INFO = void 0;
+exports.initializeInstructions = initializeInstructions;
 const path = __importStar(require("path"));
 const transport_1 = require("./transport");
 const tools_1 = require("./tools");
@@ -54,6 +55,7 @@ const server_instructions_1 = require("./server-instructions");
 const version_1 = require("./version");
 const directory_1 = require("../directory");
 const telemetry_1 = require("../telemetry");
+const update_check_1 = require("../upgrade/update-check");
 /**
  * MCP Server Info — kept on the session because some clients log it. The
  * version tracks the real package version (was a hard-coded '0.1.0').
@@ -64,6 +66,25 @@ exports.SERVER_INFO = {
     name: 'codegraph-vba',
     version: version_1.CodeGraphPackageVersion,
 };
+/**
+ * Instructions for the `initialize` response, with the update-availability
+ * notice appended when one is known (#1243). Exported so the proxy's local
+ * handshake sends the IDENTICAL payload — same convention as SERVER_INFO.
+ * `getUpdateNotice` is a memoized synchronous cache read, so the #172
+ * respond-fast contract holds; when no notice exists the instructions are
+ * byte-identical to the bare constants.
+ *
+ * Test-authoring note: on a machine whose real `~/.codegraph` cache knows a
+ * newer release, spawned servers append the notice — a test asserting exact
+ * instructions equality must set `CODEGRAPH_NO_UPDATE_CHECK=1` in the spawn
+ * env or it will fail only in the weeks after a release ships.
+ */
+function initializeInstructions(base, notice = (0, update_check_1.getUpdateNotice)()) {
+    if (!notice)
+        return base;
+    return (`${base}\n\n---\n${notice} This server keeps running the old version until ` +
+        `the user upgrades — mention it when convenient; do not run the upgrade yourself.`);
+}
 /** MCP Protocol Version (latest the server claims). */
 exports.PROTOCOL_VERSION = '2024-11-05';
 /**
@@ -220,7 +241,7 @@ class MCPSession {
             protocolVersion: exports.PROTOCOL_VERSION,
             capabilities: { tools: {} },
             serverInfo: exports.SERVER_INFO,
-            instructions: indexed ? server_instructions_1.SERVER_INSTRUCTIONS : server_instructions_1.SERVER_INSTRUCTIONS_NO_ROOT_INDEX,
+            instructions: initializeInstructions(indexed ? server_instructions_1.SERVER_INSTRUCTIONS : server_instructions_1.SERVER_INSTRUCTIONS_NO_ROOT_INDEX),
         });
         if (explicitPath) {
             // Kick off engine init in the background. If another session in the
@@ -259,8 +280,14 @@ class MCPSession {
             this.transport.sendError(request.id, transport_1.ErrorCodes.InvalidParams, `Unknown tool: ${toolName}`);
             return;
         }
+        if (process.env.CODEGRAPH_MCP_DEBUG)
+            process.stderr.write(`[mcp-debug] toolsCall ${toolName} id=${String(request.id)} pre-init\n`);
         await this.retryInitIfNeeded();
+        if (process.env.CODEGRAPH_MCP_DEBUG)
+            process.stderr.write(`[mcp-debug] toolsCall ${toolName} id=${String(request.id)} dispatch\n`);
         const result = await this.engine.getToolHandler().execute(toolName, toolArgs);
+        if (process.env.CODEGRAPH_MCP_DEBUG)
+            process.stderr.write(`[mcp-debug] toolsCall ${toolName} id=${String(request.id)} done\n`);
         this.transport.sendResult(request.id, result);
         // After the reply is on the wire — telemetry must never delay a tool
         // response (in-memory increment only; see src/telemetry).

package/lib/dist/mcp/session.js.map

@@ -1 +1 @@
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