@applica-software-guru/sdd-core 1.7.0 → 1.8.0

package/dist/remote/api-client.d.ts

@@ -1,5 +1,5 @@
 import type { SDDConfig } from '../types.js';
-import type { RemoteDocResponse, RemoteDocBulkResponse, RemoteCRResponse, RemoteCRBulkResponse, RemoteBugResponse, RemoteBugBulkResponse, RemoteResetResult } from './types.js';
+import type { RemoteDocResponse, RemoteDocBulkResponse, RemoteCRResponse, RemoteCRBulkResponse, RemoteBugResponse, RemoteBugBulkResponse, RemoteDeleteResponse, RemoteResetResult } from './types.js';
 /** Default timeout for remote operations (seconds) */
 export declare const DEFAULT_REMOTE_TIMEOUT = 300;
 export interface ApiClientConfig {
@@ -48,6 +48,12 @@ export declare function pushBugs(config: ApiClientConfig, bugs: Array<{
     severity?: string;
     id?: string;
 }>): Promise<RemoteBugBulkResponse>;
+/** POST /cli/delete-docs */
+export declare function deleteDocs(config: ApiClientConfig, paths: string[]): Promise<RemoteDeleteResponse>;
+/** POST /cli/delete-crs */
+export declare function deleteCRs(config: ApiClientConfig, paths: string[]): Promise<RemoteDeleteResponse>;
+/** POST /cli/delete-bugs */
+export declare function deleteBugs(config: ApiClientConfig, paths: string[]): Promise<RemoteDeleteResponse>;
 /** POST /cli/crs/:crId/applied */
 export declare function markCRAppliedRemote(config: ApiClientConfig, crId: string): Promise<RemoteCRResponse>;
 /** POST /cli/bugs/:bugId/resolved */

package/dist/remote/api-client.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"api-client.d.ts","sourceRoot":"","sources":["../../src/remote/api-client.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE7C,OAAO,KAAK,EACV,iBAAiB,EACjB,qBAAqB,EACrB,gBAAgB,EAChB,oBAAoB,EACpB,iBAAiB,EACjB,qBAAqB,EACrB,oBAAoB,EACpB,iBAAiB,EAClB,MAAM,YAAY,CAAC;AAEpB,sDAAsD;AACtD,eAAO,MAAM,sBAAsB,MAAM,CAAC;AAW1C,MAAM,WAAW,eAAe;IAC9B,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;CACjB;AAED;;GAEG;AACH,wBAAgB,aAAa,CAAC,MAAM,EAAE,SAAS,GAAG,MAAM,GAAG,IAAI,CAI9D;AAED;;;GAGG;AACH;;;;GAIG;AACH,wBAAgB,cAAc,CAAC,MAAM,EAAE,SAAS,EAAE,eAAe,CAAC,EAAE,MAAM,GAAG,eAAe,CAa3F;AA0GD,yBAAyB;AACzB,wBAAsB,QAAQ,CAAC,MAAM,EAAE,eAAe,GAAG,OAAO,CAAC,iBAAiB,EAAE,CAAC,CAEpF;AAED,0BAA0B;AAC1B,wBAAsB,QAAQ,CAC5B,MAAM,EAAE,eAAe,EACvB,SAAS,EAAE,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAA;CAAE,CAAC,GACjE,OAAO,CAAC,qBAAqB,CAAC,CAEhC;AAED,2BAA2B;AAC3B,wBAAsB,eAAe,CAAC,MAAM,EAAE,eAAe,GAAG,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAE1F;AAED,yBAAyB;AACzB,wBAAsB,OAAO,CAC3B,MAAM,EAAE,eAAe,EACvB,cAAc,EAAE,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,EAAE,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,GAChF,OAAO,CAAC,oBAAoB,CAAC,CAE/B;AAED,yBAAyB;AACzB,wBAAsB,aAAa,CAAC,MAAM,EAAE,eAAe,GAAG,OAAO,CAAC,iBAAiB,EAAE,CAAC,CAEzF;AAED,0BAA0B;AAC1B,wBAAsB,QAAQ,CAC5B,MAAM,EAAE,eAAe,EACvB,IAAI,EAAE,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAAC,EAAE,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC,GACzF,OAAO,CAAC,qBAAqB,CAAC,CAEhC;AAED,4BAA4B;AAC5B,wBAAsB,UAAU,CAC9B,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,EAAE,GACd,OAAO,CAAC,oBAAoB,CAAC,CAE/B;AAED,2BAA2B;AAC3B,wBAAsB,SAAS,CAC7B,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,EAAE,GACd,OAAO,CAAC,oBAAoB,CAAC,CAE/B;AAED,4BAA4B;AAC5B,wBAAsB,UAAU,CAC9B,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,EAAE,GACd,OAAO,CAAC,oBAAoB,CAAC,CAE/B;AAED,kCAAkC;AAClC,wBAAsB,mBAAmB,CACvC,MAAM,EAAE,eAAe,EACvB,IAAI,EAAE,MAAM,GACX,OAAO,CAAC,gBAAgB,CAAC,CAE3B;AAED,qCAAqC;AACrC,wBAAsB,qBAAqB,CACzC,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,GACZ,OAAO,CAAC,iBAAiB,CAAC,CAE5B;AAED,wFAAwF;AACxF,wBAAsB,eAAe,CACnC,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,EACb,OAAO,EAAE,MAAM,GACd,OAAO,CAAC,iBAAiB,CAAC,CAE5B;AAED,qFAAqF;AACrF,wBAAsB,cAAc,CAClC,MAAM,EAAE,eAAe,EACvB,IAAI,EAAE,MAAM,EACZ,IAAI,EAAE,MAAM,GACX,OAAO,CAAC,gBAAgB,CAAC,CAE3B;AAED,wFAAwF;AACxF,wBAAsB,eAAe,CACnC,MAAM,EAAE,eAAe,EACvB,KAAK,EAAE,MAAM,EACb,IAAI,EAAE,MAAM,GACX,OAAO,CAAC,iBAAiB,CAAC,CAE5B;AAED,yDAAyD;AACzD,wBAAsB,YAAY,CAChC,MAAM,EAAE,eAAe,EACvB,WAAW,EAAE,MAAM,GAClB,OAAO,CAAC,iBAAiB,CAAC,CAE5B"}

package/dist/remote/api-client.js

@@ -9,6 +9,9 @@ exports.fetchPendingCRs = fetchPendingCRs;
 exports.pushCRs = pushCRs;
 exports.fetchOpenBugs = fetchOpenBugs;
 exports.pushBugs = pushBugs;
+exports.deleteDocs = deleteDocs;
+exports.deleteCRs = deleteCRs;
+exports.deleteBugs = deleteBugs;
 exports.markCRAppliedRemote = markCRAppliedRemote;
 exports.markBugResolvedRemote = markBugResolvedRemote;
 exports.markDocEnriched = markDocEnriched;
@@ -166,6 +169,18 @@ async function fetchOpenBugs(config) {
 async function pushBugs(config, bugs) {
     return request(config, 'POST', '/cli/push-bugs', { bugs });
 }
+/** POST /cli/delete-docs */
+async function deleteDocs(config, paths) {
+    return request(config, 'POST', '/cli/delete-docs', { paths });
+}
+/** POST /cli/delete-crs */
+async function deleteCRs(config, paths) {
+    return request(config, 'POST', '/cli/delete-crs', { paths });
+}
+/** POST /cli/delete-bugs */
+async function deleteBugs(config, paths) {
+    return request(config, 'POST', '/cli/delete-bugs', { paths });
+}
 /** POST /cli/crs/:crId/applied */
 async function markCRAppliedRemote(config, crId) {
     return request(config, 'POST', `/cli/crs/${crId}/applied`);

package/dist/remote/api-client.js.map

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package/dist/remote/sync-engine.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"sync-engine.d.ts","sourceRoot":"","sources":["../../src/remote/sync-engine.ts"],"names":[],"mappings":"AAYA,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EAEV,kBAAkB,EAClB,kBAAkB,EAClB,iBAAiB,EAElB,MAAM,YAAY,CAAC;AA4EpB,MAAM,WAAW,WAAW;IAC1B,KAAK,CAAC,EAAE,MAAM,EAAE,CAAC;IACjB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,wBAAsB,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,CAqJ3F;AAID,wBAAsB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CAiExF;AAkBD,wBAAsB,iBAAiB,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAsEnG;AAID,wBAAsB,kBAAkB,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAsEpG;AAID,wBAAsB,kBAAkB,CAAC,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAUxH;AAID,wBAAsB,eAAe,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA6BjG"}
+{"version":3,"file":"sync-engine.d.ts","sourceRoot":"","sources":["../../src/remote/sync-engine.ts"],"names":[],"mappings":"AAYA,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EAEV,kBAAkB,EAClB,kBAAkB,EAClB,iBAAiB,EAElB,MAAM,YAAY,CAAC;AA4EpB,MAAM,WAAW,WAAW;IAC1B,KAAK,CAAC,EAAE,MAAM,EAAE,CAAC;IACjB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAaD,wBAAsB,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,CA4M3F;AAID,wBAAsB,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CA2FxF;AAkBD,wBAAsB,iBAAiB,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAsFnG;AAID,wBAAsB,kBAAkB,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAsFpG;AAID,wBAAsB,kBAAkB,CAAC,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAexH;AAID,wBAAsB,eAAe,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAoCjG"}

package/dist/remote/sync-engine.js

@@ -88,6 +88,9 @@ function extractBody(rawMarkdown) {
     const parsed = (0, gray_matter_1.default)(rawMarkdown);
     return parsed.content.trim();
 }
+function isReseedPush(state, options) {
+    return state.needsReseed === true && !(options?.paths && options.paths.length > 0);
+}
 async function pushToRemote(root, options) {
     const config = await (0, config_manager_js_1.readConfig)(root);
     const api = (0, api_client_js_1.buildApiConfig)(config, options?.timeout);
@@ -96,6 +99,7 @@ async function pushToRemote(root, options) {
         state.changeRequests = {};
     if (!state.bugs)
         state.bugs = {};
+    const reseedPush = isReseedPush(state, options);
     let totalCreated = 0;
     let totalUpdated = 0;
     const allPushed = [];
@@ -104,9 +108,14 @@ async function pushToRemote(root, options) {
     const toPush = files.filter((f) => {
         if (options?.paths && options.paths.length > 0)
             return options.paths.includes(f.relativePath);
+        if (reseedPush)
+            return true;
         if (options?.all)
             return true;
-        return f.frontmatter.status !== 'synced';
+        const tracked = state.documents[normalizePath(f.relativePath)];
+        if (!tracked)
+            return true;
+        return tracked.localHash !== f.hash;
     });
     if (toPush.length > 0) {
         const documents = toPush.map((f) => ({
@@ -116,7 +125,7 @@ async function pushToRemote(root, options) {
         }));
         const result = await (0, api_client_js_1.pushDocs)(api, documents);
         for (const doc of result.documents) {
-            const localPath = doc.path;
+            const localPath = normalizePath(doc.path);
             const absPath = (0, node_path_1.resolve)(root, localPath);
             const rawContent = (0, node_fs_1.existsSync)(absPath) ? await (0, promises_1.readFile)(absPath, 'utf-8') : '';
             state.documents[localPath] = {
@@ -126,29 +135,31 @@ async function pushToRemote(root, options) {
                 lastSynced: new Date().toISOString(),
             };
         }
-        // Mark local files as synced (drafts are excluded — they need AI enrichment first)
-        for (const f of toPush) {
-            if (f.frontmatter.status === 'draft')
-                continue;
-            const absPath = (0, node_path_1.resolve)(root, f.relativePath);
-            const content = await (0, promises_1.readFile)(absPath, 'utf-8');
-            const updated = content.replace(/^status:\s*(new|changed)/m, 'status: synced');
-            if (updated !== content) {
-                await (0, promises_1.writeFile)(absPath, updated, 'utf-8');
-            }
-        }
         totalCreated += result.created;
         totalUpdated += result.updated;
         allPushed.push(...toPush.map((f) => f.relativePath));
     }
     // ── Change Requests ────────────────────────────────────────────────────
     const crFiles = await (0, cr_parser_js_1.parseAllCRFiles)(root);
+    const crHashes = new Map();
+    for (const cr of crFiles) {
+        const absPath = (0, node_path_1.resolve)(root, cr.relativePath);
+        const raw = (0, node_fs_1.existsSync)(absPath) ? await (0, promises_1.readFile)(absPath, 'utf-8') : '';
+        crHashes.set(normalizePath(cr.relativePath), sha256(raw));
+    }
     const crsToPush = crFiles.filter((cr) => {
         if (options?.paths && options.paths.length > 0)
             return options.paths.includes(cr.relativePath);
+        if (reseedPush)
+            return true;
         if (options?.all)
             return true;
-        return cr.frontmatter.status !== 'applied';
+        const key = normalizePath(cr.relativePath);
+        const tracked = state.changeRequests[key];
+        const localHash = crHashes.get(key);
+        if (!tracked || !localHash)
+            return true;
+        return tracked.localHash !== localHash;
     });
     if (crsToPush.length > 0) {
         const crPayload = crsToPush.map((cr) => {
@@ -180,12 +191,25 @@ async function pushToRemote(root, options) {
     }
     // ── Bugs ───────────────────────────────────────────────────────────────
     const bugFiles = await (0, bug_parser_js_1.parseAllBugFiles)(root);
+    const bugHashes = new Map();
+    for (const bug of bugFiles) {
+        const absPath = (0, node_path_1.resolve)(root, bug.relativePath);
+        const raw = (0, node_fs_1.existsSync)(absPath) ? await (0, promises_1.readFile)(absPath, 'utf-8') : '';
+        bugHashes.set(normalizePath(bug.relativePath), sha256(raw));
+    }
     const bugsToPush = bugFiles.filter((bug) => {
         if (options?.paths && options.paths.length > 0)
             return options.paths.includes(bug.relativePath);
+        if (reseedPush)
+            return true;
         if (options?.all)
             return true;
-        return bug.frontmatter.status !== 'resolved';
+        const key = normalizePath(bug.relativePath);
+        const tracked = state.bugs[key];
+        const localHash = bugHashes.get(key);
+        if (!tracked || !localHash)
+            return true;
+        return tracked.localHash !== localHash;
     });
     if (bugsToPush.length > 0) {
         const bugPayload = bugsToPush.map((bug) => {
@@ -215,13 +239,43 @@ async function pushToRemote(root, options) {
         totalUpdated += bugResult.updated;
         allPushed.push(...bugsToPush.map((bug) => bug.relativePath));
     }
+    // ── Detect local deletions (tracked in state but missing from disk) ──
+    const allDeleted = [];
+    const deletedDocPaths = Object.keys(state.documents).filter((p) => !(0, node_fs_1.existsSync)((0, node_path_1.resolve)(root, p)));
+    if (deletedDocPaths.length > 0) {
+        await (0, api_client_js_1.deleteDocs)(api, deletedDocPaths);
+        for (const p of deletedDocPaths) {
+            delete state.documents[p];
+        }
+        allDeleted.push(...deletedDocPaths);
+    }
+    const deletedCRPaths = Object.keys(state.changeRequests).filter((p) => !(0, node_fs_1.existsSync)((0, node_path_1.resolve)(root, p)));
+    if (deletedCRPaths.length > 0) {
+        await (0, api_client_js_1.deleteCRs)(api, deletedCRPaths);
+        for (const p of deletedCRPaths) {
+            delete state.changeRequests[p];
+        }
+        allDeleted.push(...deletedCRPaths);
+    }
+    const deletedBugPaths = Object.keys(state.bugs).filter((p) => !(0, node_fs_1.existsSync)((0, node_path_1.resolve)(root, p)));
+    if (deletedBugPaths.length > 0) {
+        await (0, api_client_js_1.deleteBugs)(api, deletedBugPaths);
+        for (const p of deletedBugPaths) {
+            delete state.bugs[p];
+        }
+        allDeleted.push(...deletedBugPaths);
+    }
     // ── Finalize ───────────────────────────────────────────────────────────
     state.lastPush = new Date().toISOString();
+    if (reseedPush) {
+        state.needsReseed = false;
+    }
     await (0, state_js_1.writeRemoteState)(root, state);
     return {
         created: totalCreated,
         updated: totalUpdated,
         pushed: allPushed,
+        deleted: allDeleted,
     };
 }
 // ─── Pull Documents ──────────────────────────────────────────────────────
@@ -232,7 +286,35 @@ async function pullFromRemote(root, timeout) {
     const state = await (0, state_js_1.readRemoteState)(root);
     const created = [];
     const updated = [];
+    const deleted = [];
     const conflicts = [];
+    // Detect remote deletions: tracked locally but not in remote response
+    const remotePathSet = new Set(remoteDocs.map((d) => d.path));
+    for (const [localPath, tracked] of Object.entries(state.documents)) {
+        if (!remotePathSet.has(localPath)) {
+            // File was deleted on remote — check if locally modified
+            const absPath = (0, node_path_1.resolve)(root, localPath);
+            if ((0, node_fs_1.existsSync)(absPath)) {
+                const localRaw = await (0, promises_1.readFile)(absPath, 'utf-8');
+                const localHash = sha256(localRaw);
+                if (localHash !== tracked.localHash) {
+                    // Locally modified but deleted on remote → conflict
+                    conflicts.push({
+                        path: localPath,
+                        localVersion: tracked.remoteVersion.toString(),
+                        remoteVersion: 0,
+                        reason: 'File modified locally but deleted on remote',
+                    });
+                }
+                else {
+                    // Not modified locally → safe to delete
+                    await (0, promises_1.unlink)(absPath);
+                    deleted.push(localPath);
+                }
+            }
+            delete state.documents[localPath];
+        }
+    }
     for (const doc of remoteDocs) {
         const localPath = doc.path;
         const absPath = (0, node_path_1.resolve)(root, localPath);
@@ -272,9 +354,7 @@ async function pullFromRemote(root, timeout) {
             }
             else {
                 // Only remote body changed — surgically replace body, preserve frontmatter
-                const newStatus = doc.status === 'draft' ? 'draft' : 'synced';
-                let updatedContent = replaceBody(localRaw, doc.content);
-                updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+                const updatedContent = replaceBody(localRaw, doc.content);
                 await (0, promises_1.writeFile)(absPath, updatedContent, 'utf-8');
                 updated.push(localPath);
                 updateDocState(state, doc, localPath, updatedContent);
@@ -283,7 +363,7 @@ async function pullFromRemote(root, timeout) {
     }
     state.lastPull = new Date().toISOString();
     await (0, state_js_1.writeRemoteState)(root, state);
-    return { created, updated, conflicts };
+    return { created, updated, deleted, conflicts };
 }
 function updateDocState(state, doc, localPath, markdownContent) {
     state.documents[localPath] = {
@@ -308,6 +388,23 @@ async function pullCRsFromRemote(root, timeout) {
     }
     let created = 0;
     let updated = 0;
+    let deletedCount = 0;
+    // Detect remote deletions: tracked locally but not in remote response
+    const remoteCRIdSet = new Set(remoteCRs.map((cr) => cr.id));
+    for (const [localPath, tracked] of Object.entries(state.changeRequests)) {
+        if (!remoteCRIdSet.has(tracked.remoteId)) {
+            const absPath = (0, node_path_1.resolve)(root, localPath);
+            if ((0, node_fs_1.existsSync)(absPath)) {
+                const localRaw = await (0, promises_1.readFile)(absPath, 'utf-8');
+                const localHash = sha256(localRaw);
+                if (localHash === tracked.localHash) {
+                    await (0, promises_1.unlink)(absPath);
+                    deletedCount++;
+                }
+            }
+            delete state.changeRequests[localPath];
+        }
+    }
     for (const cr of remoteCRs) {
         const localPath = cr.path ?? idToPath.get(cr.id) ?? `change-requests/CR-${cr.id.substring(0, 8)}.md`;
         const absPath = (0, node_path_1.resolve)(root, localPath);
@@ -330,9 +427,7 @@ async function pullCRsFromRemote(root, timeout) {
                 continue;
             }
             // Body changed — update body, preserve frontmatter
-            const newStatus = cr.status === 'draft' ? 'draft' : 'pending';
-            let updatedContent = replaceBody(localRaw, cr.body);
-            updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+            const updatedContent = replaceBody(localRaw, cr.body);
             await (0, promises_1.writeFile)(absPath, updatedContent, 'utf-8');
             updated++;
             state.changeRequests[normalizePath(localPath)] = {
@@ -355,7 +450,7 @@ async function pullCRsFromRemote(root, timeout) {
         }
     }
     await (0, state_js_1.writeRemoteState)(root, state);
-    return { created, updated };
+    return { created, updated, deleted: deletedCount };
 }
 // ─── Pull Bugs ───────────────────────────────────────────────────────────
 async function pullBugsFromRemote(root, timeout) {
@@ -372,6 +467,23 @@ async function pullBugsFromRemote(root, timeout) {
     }
     let created = 0;
     let updated = 0;
+    let deletedCount = 0;
+    // Detect remote deletions: tracked locally but not in remote response
+    const remoteBugIdSet = new Set(remoteBugs.map((b) => b.id));
+    for (const [localPath, tracked] of Object.entries(state.bugs)) {
+        if (!remoteBugIdSet.has(tracked.remoteId)) {
+            const absPath = (0, node_path_1.resolve)(root, localPath);
+            if ((0, node_fs_1.existsSync)(absPath)) {
+                const localRaw = await (0, promises_1.readFile)(absPath, 'utf-8');
+                const localHash = sha256(localRaw);
+                if (localHash === tracked.localHash) {
+                    await (0, promises_1.unlink)(absPath);
+                    deletedCount++;
+                }
+            }
+            delete state.bugs[localPath];
+        }
+    }
     for (const bug of remoteBugs) {
         const localPath = bug.path ?? idToPath.get(bug.id) ?? `bugs/BUG-${bug.id.substring(0, 8)}.md`;
         const absPath = (0, node_path_1.resolve)(root, localPath);
@@ -394,9 +506,7 @@ async function pullBugsFromRemote(root, timeout) {
                 continue;
             }
             // Body changed — update body, preserve frontmatter
-            const newStatus = bug.status === 'draft' ? 'draft' : 'open';
-            let updatedContent = replaceBody(localRaw, bug.body);
-            updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+            const updatedContent = replaceBody(localRaw, bug.body);
             await (0, promises_1.writeFile)(absPath, updatedContent, 'utf-8');
             updated++;
             state.bugs[normalizePath(localPath)] = {
@@ -419,15 +529,20 @@ async function pullBugsFromRemote(root, timeout) {
         }
     }
     await (0, state_js_1.writeRemoteState)(root, state);
-    return { created, updated };
+    return { created, updated, deleted: deletedCount };
 }
 // ─── Reset Remote ────────────────────────────────────────────────────────
 async function resetRemoteProject(root, confirmSlug, timeout) {
     const config = await (0, config_manager_js_1.readConfig)(root);
     const api = (0, api_client_js_1.buildApiConfig)(config, timeout);
     const result = await (0, api_client_js_1.resetProject)(api, confirmSlug);
-    // Clear local remote state so stale mappings don't linger
-    await (0, state_js_1.writeRemoteState)(root, { documents: {} });
+    // Clear local remote state and mark the project for a full reseed on the next push.
+    await (0, state_js_1.writeRemoteState)(root, {
+        needsReseed: true,
+        documents: {},
+        changeRequests: {},
+        bugs: {},
+    });
     return result;
 }
 // ─── Remote Status ───────────────────────────────────────────────────────
@@ -437,7 +552,15 @@ async function getRemoteStatus(root, timeout) {
         return { configured: false, url: null, connected: false, localPending: 0, remoteDocs: 0 };
     }
     const files = await (0, story_parser_js_1.parseAllStoryFiles)(root);
-    const localPending = files.filter((f) => f.frontmatter.status !== 'synced').length;
+    const state = await (0, state_js_1.readRemoteState)(root);
+    const localPending = state.needsReseed
+        ? files.length
+        : files.filter((f) => {
+            const tracked = state.documents[normalizePath(f.relativePath)];
+            if (!tracked)
+                return true;
+            return tracked.localHash !== f.hash;
+        }).length;
     try {
         const api = (0, api_client_js_1.buildApiConfig)(config, timeout);
         const docs = await (0, api_client_js_1.pullDocs)(api);

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package/dist/remote/types.d.ts

@@ -76,15 +76,22 @@ export interface RemoteEntityState {
 export interface RemoteState {
     lastPull?: string;
     lastPush?: string;
+    needsReseed?: boolean;
     documents: Record<string, RemoteDocState>;
     changeRequests?: Record<string, RemoteEntityState>;
     bugs?: Record<string, RemoteEntityState>;
 }
+/** Response from delete endpoints */
+export interface RemoteDeleteResponse {
+    deleted: number;
+    paths: string[];
+}
 /** Result of a push operation */
 export interface PushResult {
     created: number;
     updated: number;
     pushed: string[];
+    deleted: string[];
 }
 /** A conflict detected during pull */
 export interface PullConflict {
@@ -97,12 +104,14 @@ export interface PullConflict {
 export interface PullResult {
     created: string[];
     updated: string[];
+    deleted: string[];
     conflicts: PullConflict[];
 }
 /** Result of a pull CRs/Bugs operation */
 export interface PullEntitiesResult {
     created: number;
     updated: number;
+    deleted: number;
 }
 /** Result of remote status check */
 export interface RemoteStatusResult {

package/dist/remote/types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../src/remote/types.ts"],"names":[],"mappings":"AAAA,sDAAsD;AACtD,MAAM,WAAW,iBAAiB;IAChC,EAAE,EAAE,MAAM,CAAC;IACX,UAAU,EAAE,MAAM,CAAC;IACnB,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,gBAAgB,EAAE,MAAM,GAAG,IAAI,CAAC;IAChC,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,kDAAkD;AAClD,MAAM,WAAW,qBAAqB;IACpC,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,iBAAiB,EAAE,CAAC;CAChC;AAED,4DAA4D;AAC5D,MAAM,WAAW,gBAAgB;IAC/B,EAAE,EAAE,MAAM,CAAC;IACX,UAAU,EAAE,MAAM,CAAC;IACnB,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,YAAY,EAAE,MAAM,EAAE,GAAG,IAAI,CAAC;IAC9B,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,iDAAiD;AACjD,MAAM,WAAW,iBAAiB;IAChC,EAAE,EAAE,MAAM,CAAC;IACX,UAAU,EAAE,MAAM,CAAC;IACnB,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,iDAAiD;AACjD,MAAM,WAAW,oBAAoB;IACnC,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,eAAe,EAAE,gBAAgB,EAAE,CAAC;CACrC;AAED,kDAAkD;AAClD,MAAM,WAAW,qBAAqB;IACpC,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,iBAAiB,EAAE,CAAC;CAC3B;AAED,4CAA4C;AAC5C,MAAM,WAAW,cAAc;IAC7B,QAAQ,EAAE,MAAM,CAAC;IACjB,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,MAAM,CAAC;IAClB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,sDAAsD;AACtD,MAAM,WAAW,iBAAiB;IAChC,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,0CAA0C;AAC1C,MAAM,WAAW,WAAW;IAC1B,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,cAAc,CAAC,CAAC;IAC1C,cAAc,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAAC;IACnD,IAAI,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAAC;CAC1C;AAED,qCAAqC;AACrC,MAAM,WAAW,oBAAoB;IACnC,OAAO,EAAE,MAAM,CAAC;IAChB,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED,iCAAiC;AACjC,MAAM,WAAW,UAAU;IACzB,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,OAAO,EAAE,MAAM,EAAE,CAAC;CACnB;AAED,sCAAsC;AACtC,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC;IACb,YAAY,EAAE,MAAM,CAAC;IACrB,aAAa,EAAE,MAAM,CAAC;IACtB,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,iCAAiC;AACjC,MAAM,WAAW,UAAU;IACzB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,SAAS,EAAE,YAAY,EAAE,CAAC;CAC3B;AAED,0CAA0C;AAC1C,MAAM,WAAW,kBAAkB;IACjC,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,oCAAoC;AACpC,MAAM,WAAW,kBAAkB;IACjC,UAAU,EAAE,OAAO,CAAC;IACpB,GAAG,EAAE,MAAM,GAAG,IAAI,CAAC;IACnB,SAAS,EAAE,OAAO,CAAC;IACnB,YAAY,EAAE,MAAM,CAAC;IACrB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,uCAAuC;AACvC,MAAM,WAAW,iBAAiB;IAChC,OAAO,EAAE,MAAM,CAAC;IAChB,iBAAiB,EAAE,MAAM,CAAC;IAC1B,uBAAuB,EAAE,MAAM,CAAC;IAChC,YAAY,EAAE,MAAM,CAAC;IACrB,gBAAgB,EAAE,MAAM,CAAC;IACzB,qBAAqB,EAAE,MAAM,CAAC;CAC/B"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@applica-software-guru/sdd-core",
-  "version": "1.7.0",
+  "version": "1.8.0",
   "description": "Core library for Story Driven Development",
   "author": "Bruno Fortunato <bruno.fortunato@applica.guru>",
   "main": "dist/index.js",

package/src/remote/api-client.ts

@@ -7,6 +7,7 @@ import type {
   RemoteCRBulkResponse,
   RemoteBugResponse,
   RemoteBugBulkResponse,
+  RemoteDeleteResponse,
   RemoteResetResult,
 } from './types.js';
 
@@ -204,6 +205,30 @@ export async function pushBugs(
   return request<RemoteBugBulkResponse>(config, 'POST', '/cli/push-bugs', { bugs });
 }
 
+/** POST /cli/delete-docs */
+export async function deleteDocs(
+  config: ApiClientConfig,
+  paths: string[],
+): Promise<RemoteDeleteResponse> {
+  return request<RemoteDeleteResponse>(config, 'POST', '/cli/delete-docs', { paths });
+}
+
+/** POST /cli/delete-crs */
+export async function deleteCRs(
+  config: ApiClientConfig,
+  paths: string[],
+): Promise<RemoteDeleteResponse> {
+  return request<RemoteDeleteResponse>(config, 'POST', '/cli/delete-crs', { paths });
+}
+
+/** POST /cli/delete-bugs */
+export async function deleteBugs(
+  config: ApiClientConfig,
+  paths: string[],
+): Promise<RemoteDeleteResponse> {
+  return request<RemoteDeleteResponse>(config, 'POST', '/cli/delete-bugs', { paths });
+}
+
 /** POST /cli/crs/:crId/applied */
 export async function markCRAppliedRemote(
   config: ApiClientConfig,

package/src/remote/sync-engine.ts

@@ -1,4 +1,4 @@
-import { readFile, writeFile, mkdir } from 'node:fs/promises';
+import { readFile, writeFile, mkdir, unlink } from 'node:fs/promises';
 import { existsSync } from 'node:fs';
 import { resolve, dirname, posix } from 'node:path';
 import { createHash } from 'node:crypto';
@@ -8,7 +8,7 @@ import { readConfig } from '../config/config-manager.js';
 import { parseAllStoryFiles } from '../parser/story-parser.js';
 import { parseAllCRFiles } from '../parser/cr-parser.js';
 import { parseAllBugFiles } from '../parser/bug-parser.js';
-import { buildApiConfig, pullDocs, pushDocs, pushCRs, pushBugs, fetchPendingCRs, fetchOpenBugs, resetProject } from './api-client.js';
+import { buildApiConfig, pullDocs, pushDocs, pushCRs, pushBugs, deleteDocs, deleteCRs, deleteBugs, fetchPendingCRs, fetchOpenBugs, resetProject } from './api-client.js';
 import { readRemoteState, writeRemoteState } from './state.js';
 import type {
   PushResult,
@@ -100,12 +100,24 @@ export interface PushOptions {
   timeout?: number;
 }
 
+function isReseedPush(state: RemoteStatusTrackingState, options?: PushOptions): boolean {
+  return state.needsReseed === true && !(options?.paths && options.paths.length > 0);
+}
+
+type RemoteStatusTrackingState = {
+  needsReseed?: boolean;
+  documents: Record<string, { remoteId: string; remoteVersion: number; localHash: string; lastSynced: string }>;
+  changeRequests?: Record<string, { remoteId: string; localHash: string; lastSynced: string }>;
+  bugs?: Record<string, { remoteId: string; localHash: string; lastSynced: string }>;
+};
+
 export async function pushToRemote(root: string, options?: PushOptions): Promise<PushResult> {
   const config = await readConfig(root);
   const api = buildApiConfig(config, options?.timeout);
   const state = await readRemoteState(root);
   if (!state.changeRequests) state.changeRequests = {};
   if (!state.bugs) state.bugs = {};
+  const reseedPush = isReseedPush(state, options);
 
   let totalCreated = 0;
   let totalUpdated = 0;
@@ -115,8 +127,11 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
   const files = await parseAllStoryFiles(root);
   const toPush = files.filter((f) => {
     if (options?.paths && options.paths.length > 0) return options.paths.includes(f.relativePath);
+    if (reseedPush) return true;
     if (options?.all) return true;
-    return f.frontmatter.status !== 'synced';
+    const tracked = state.documents[normalizePath(f.relativePath)];
+    if (!tracked) return true;
+    return tracked.localHash !== f.hash;
   });
 
   if (toPush.length > 0) {
@@ -129,7 +144,7 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
     const result = await pushDocs(api, documents);
 
     for (const doc of result.documents) {
-      const localPath = doc.path;
+      const localPath = normalizePath(doc.path);
       const absPath = resolve(root, localPath);
       const rawContent = existsSync(absPath) ? await readFile(absPath, 'utf-8') : '';
       state.documents[localPath] = {
@@ -140,17 +155,6 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
       };
     }
 
-    // Mark local files as synced (drafts are excluded — they need AI enrichment first)
-    for (const f of toPush) {
-      if (f.frontmatter.status === 'draft') continue;
-      const absPath = resolve(root, f.relativePath);
-      const content = await readFile(absPath, 'utf-8');
-      const updated = content.replace(/^status:\s*(new|changed)/m, 'status: synced');
-      if (updated !== content) {
-        await writeFile(absPath, updated, 'utf-8');
-      }
-    }
-
     totalCreated += result.created;
     totalUpdated += result.updated;
     allPushed.push(...toPush.map((f) => f.relativePath));
@@ -158,10 +162,21 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
 
   // ── Change Requests ────────────────────────────────────────────────────
   const crFiles = await parseAllCRFiles(root);
+  const crHashes = new Map<string, string>();
+  for (const cr of crFiles) {
+    const absPath = resolve(root, cr.relativePath);
+    const raw = existsSync(absPath) ? await readFile(absPath, 'utf-8') : '';
+    crHashes.set(normalizePath(cr.relativePath), sha256(raw));
+  }
   const crsToPush = crFiles.filter((cr) => {
     if (options?.paths && options.paths.length > 0) return options.paths.includes(cr.relativePath);
+    if (reseedPush) return true;
     if (options?.all) return true;
-    return cr.frontmatter.status !== 'applied';
+    const key = normalizePath(cr.relativePath);
+    const tracked = state.changeRequests![key];
+    const localHash = crHashes.get(key);
+    if (!tracked || !localHash) return true;
+    return tracked.localHash !== localHash;
   });
 
   if (crsToPush.length > 0) {
@@ -200,10 +215,21 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
 
   // ── Bugs ───────────────────────────────────────────────────────────────
   const bugFiles = await parseAllBugFiles(root);
+  const bugHashes = new Map<string, string>();
+  for (const bug of bugFiles) {
+    const absPath = resolve(root, bug.relativePath);
+    const raw = existsSync(absPath) ? await readFile(absPath, 'utf-8') : '';
+    bugHashes.set(normalizePath(bug.relativePath), sha256(raw));
+  }
   const bugsToPush = bugFiles.filter((bug) => {
     if (options?.paths && options.paths.length > 0) return options.paths.includes(bug.relativePath);
+    if (reseedPush) return true;
     if (options?.all) return true;
-    return bug.frontmatter.status !== 'resolved';
+    const key = normalizePath(bug.relativePath);
+    const tracked = state.bugs![key];
+    const localHash = bugHashes.get(key);
+    if (!tracked || !localHash) return true;
+    return tracked.localHash !== localHash;
   });
 
   if (bugsToPush.length > 0) {
@@ -240,14 +266,54 @@ export async function pushToRemote(root: string, options?: PushOptions): Promise
     allPushed.push(...bugsToPush.map((bug) => bug.relativePath));
   }
 
+  // ── Detect local deletions (tracked in state but missing from disk) ──
+  const allDeleted: string[] = [];
+
+  const deletedDocPaths = Object.keys(state.documents).filter(
+    (p) => !existsSync(resolve(root, p)),
+  );
+  if (deletedDocPaths.length > 0) {
+    await deleteDocs(api, deletedDocPaths);
+    for (const p of deletedDocPaths) {
+      delete state.documents[p];
+    }
+    allDeleted.push(...deletedDocPaths);
+  }
+
+  const deletedCRPaths = Object.keys(state.changeRequests!).filter(
+    (p) => !existsSync(resolve(root, p)),
+  );
+  if (deletedCRPaths.length > 0) {
+    await deleteCRs(api, deletedCRPaths);
+    for (const p of deletedCRPaths) {
+      delete state.changeRequests![p];
+    }
+    allDeleted.push(...deletedCRPaths);
+  }
+
+  const deletedBugPaths = Object.keys(state.bugs!).filter(
+    (p) => !existsSync(resolve(root, p)),
+  );
+  if (deletedBugPaths.length > 0) {
+    await deleteBugs(api, deletedBugPaths);
+    for (const p of deletedBugPaths) {
+      delete state.bugs![p];
+    }
+    allDeleted.push(...deletedBugPaths);
+  }
+
   // ── Finalize ───────────────────────────────────────────────────────────
   state.lastPush = new Date().toISOString();
+  if (reseedPush) {
+    state.needsReseed = false;
+  }
   await writeRemoteState(root, state);
 
   return {
     created: totalCreated,
     updated: totalUpdated,
     pushed: allPushed,
+    deleted: allDeleted,
   };
 }
 
@@ -262,8 +328,36 @@ export async function pullFromRemote(root: string, timeout?: number): Promise<Pu
 
   const created: string[] = [];
   const updated: string[] = [];
+  const deleted: string[] = [];
   const conflicts: PullConflict[] = [];
 
+  // Detect remote deletions: tracked locally but not in remote response
+  const remotePathSet = new Set(remoteDocs.map((d) => d.path));
+  for (const [localPath, tracked] of Object.entries(state.documents)) {
+    if (!remotePathSet.has(localPath)) {
+      // File was deleted on remote — check if locally modified
+      const absPath = resolve(root, localPath);
+      if (existsSync(absPath)) {
+        const localRaw = await readFile(absPath, 'utf-8');
+        const localHash = sha256(localRaw);
+        if (localHash !== tracked.localHash) {
+          // Locally modified but deleted on remote → conflict
+          conflicts.push({
+            path: localPath,
+            localVersion: tracked.remoteVersion.toString(),
+            remoteVersion: 0,
+            reason: 'File modified locally but deleted on remote',
+          });
+        } else {
+          // Not modified locally → safe to delete
+          await unlink(absPath);
+          deleted.push(localPath);
+        }
+      }
+      delete state.documents[localPath];
+    }
+  }
+
   for (const doc of remoteDocs) {
     const localPath = doc.path;
     const absPath = resolve(root, localPath);
@@ -304,9 +398,7 @@ export async function pullFromRemote(root: string, timeout?: number): Promise<Pu
         });
       } else {
         // Only remote body changed — surgically replace body, preserve frontmatter
-        const newStatus = doc.status === 'draft' ? 'draft' : 'synced';
-        let updatedContent = replaceBody(localRaw, doc.content);
-        updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+        const updatedContent = replaceBody(localRaw, doc.content);
         await writeFile(absPath, updatedContent, 'utf-8');
         updated.push(localPath);
         updateDocState(state, doc, localPath, updatedContent);
@@ -317,7 +409,7 @@ export async function pullFromRemote(root: string, timeout?: number): Promise<Pu
   state.lastPull = new Date().toISOString();
   await writeRemoteState(root, state);
 
-  return { created, updated, conflicts };
+  return { created, updated, deleted, conflicts };
 }
 
 function updateDocState(
@@ -352,6 +444,24 @@ export async function pullCRsFromRemote(root: string, timeout?: number): Promise
 
   let created = 0;
   let updated = 0;
+  let deletedCount = 0;
+
+  // Detect remote deletions: tracked locally but not in remote response
+  const remoteCRIdSet = new Set(remoteCRs.map((cr) => cr.id));
+  for (const [localPath, tracked] of Object.entries(state.changeRequests!)) {
+    if (!remoteCRIdSet.has(tracked.remoteId)) {
+      const absPath = resolve(root, localPath);
+      if (existsSync(absPath)) {
+        const localRaw = await readFile(absPath, 'utf-8');
+        const localHash = sha256(localRaw);
+        if (localHash === tracked.localHash) {
+          await unlink(absPath);
+          deletedCount++;
+        }
+      }
+      delete state.changeRequests![localPath];
+    }
+  }
 
   for (const cr of remoteCRs) {
     const localPath = cr.path ?? idToPath.get(cr.id) ?? `change-requests/CR-${cr.id.substring(0, 8)}.md`;
@@ -378,9 +488,7 @@ export async function pullCRsFromRemote(root: string, timeout?: number): Promise
       }
 
       // Body changed — update body, preserve frontmatter
-      const newStatus = cr.status === 'draft' ? 'draft' : 'pending';
-      let updatedContent = replaceBody(localRaw, cr.body);
-      updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+      const updatedContent = replaceBody(localRaw, cr.body);
       await writeFile(absPath, updatedContent, 'utf-8');
       updated++;
 
@@ -405,7 +513,7 @@ export async function pullCRsFromRemote(root: string, timeout?: number): Promise
   }
 
   await writeRemoteState(root, state);
-  return { created, updated };
+  return { created, updated, deleted: deletedCount };
 }
 
 // ─── Pull Bugs ───────────────────────────────────────────────────────────
@@ -426,6 +534,24 @@ export async function pullBugsFromRemote(root: string, timeout?: number): Promis
 
   let created = 0;
   let updated = 0;
+  let deletedCount = 0;
+
+  // Detect remote deletions: tracked locally but not in remote response
+  const remoteBugIdSet = new Set(remoteBugs.map((b) => b.id));
+  for (const [localPath, tracked] of Object.entries(state.bugs!)) {
+    if (!remoteBugIdSet.has(tracked.remoteId)) {
+      const absPath = resolve(root, localPath);
+      if (existsSync(absPath)) {
+        const localRaw = await readFile(absPath, 'utf-8');
+        const localHash = sha256(localRaw);
+        if (localHash === tracked.localHash) {
+          await unlink(absPath);
+          deletedCount++;
+        }
+      }
+      delete state.bugs![localPath];
+    }
+  }
 
   for (const bug of remoteBugs) {
     const localPath = bug.path ?? idToPath.get(bug.id) ?? `bugs/BUG-${bug.id.substring(0, 8)}.md`;
@@ -452,9 +578,7 @@ export async function pullBugsFromRemote(root: string, timeout?: number): Promis
       }
 
       // Body changed — update body, preserve frontmatter
-      const newStatus = bug.status === 'draft' ? 'draft' : 'open';
-      let updatedContent = replaceBody(localRaw, bug.body);
-      updatedContent = updatedContent.replace(/^status:\s*.+/m, `status: ${newStatus}`);
+      const updatedContent = replaceBody(localRaw, bug.body);
       await writeFile(absPath, updatedContent, 'utf-8');
       updated++;
 
@@ -479,7 +603,7 @@ export async function pullBugsFromRemote(root: string, timeout?: number): Promis
   }
 
   await writeRemoteState(root, state);
-  return { created, updated };
+  return { created, updated, deleted: deletedCount };
 }
 
 // ─── Reset Remote ────────────────────────────────────────────────────────
@@ -490,8 +614,13 @@ export async function resetRemoteProject(root: string, confirmSlug: string, time
 
   const result = await resetProject(api, confirmSlug);
 
-  // Clear local remote state so stale mappings don't linger
-  await writeRemoteState(root, { documents: {} });
+  // Clear local remote state and mark the project for a full reseed on the next push.
+  await writeRemoteState(root, {
+    needsReseed: true,
+    documents: {},
+    changeRequests: {},
+    bugs: {},
+  });
 
   return result;
 }
@@ -506,7 +635,14 @@ export async function getRemoteStatus(root: string, timeout?: number): Promise<R
   }
 
   const files = await parseAllStoryFiles(root);
-  const localPending = files.filter((f) => f.frontmatter.status !== 'synced').length;
+  const state = await readRemoteState(root);
+  const localPending = state.needsReseed
+    ? files.length
+    : files.filter((f) => {
+      const tracked = state.documents[normalizePath(f.relativePath)];
+      if (!tracked) return true;
+      return tracked.localHash !== f.hash;
+    }).length;
 
   try {
     const api = buildApiConfig(config, timeout);

package/src/remote/types.ts

@@ -84,16 +84,24 @@ export interface RemoteEntityState {
 export interface RemoteState {
   lastPull?: string;
   lastPush?: string;
+  needsReseed?: boolean;
   documents: Record<string, RemoteDocState>;
   changeRequests?: Record<string, RemoteEntityState>;
   bugs?: Record<string, RemoteEntityState>;
 }
 
+/** Response from delete endpoints */
+export interface RemoteDeleteResponse {
+  deleted: number;
+  paths: string[];
+}
+
 /** Result of a push operation */
 export interface PushResult {
   created: number;
   updated: number;
   pushed: string[];
+  deleted: string[];
 }
 
 /** A conflict detected during pull */
@@ -108,6 +116,7 @@ export interface PullConflict {
 export interface PullResult {
   created: string[];
   updated: string[];
+  deleted: string[];
   conflicts: PullConflict[];
 }
 
@@ -115,6 +124,7 @@ export interface PullResult {
 export interface PullEntitiesResult {
   created: number;
   updated: number;
+  deleted: number;
 }
 
 /** Result of remote status check */

package/tests/sync-engine.test.ts

@@ -4,6 +4,7 @@ import { existsSync } from 'node:fs';
 import { tmpdir } from 'node:os';
 import { join } from 'node:path';
 import { execSync } from 'node:child_process';
+import { createHash } from 'node:crypto';
 import { SDD } from '../src/sdd.js';
 import { readRemoteState } from '../src/remote/state.js';
 import type { RemoteDocResponse, RemoteDocBulkResponse, RemoteCRResponse, RemoteBugResponse } from '../src/remote/types.js';
@@ -12,6 +13,10 @@ function git(cmd: string, cwd: string): string {
   return execSync(`git ${cmd}`, { cwd, encoding: 'utf-8', stdio: ['pipe', 'pipe', 'pipe'] }).trim();
 }
 
+function sha256(content: string): string {
+  return createHash('sha256').update(content, 'utf-8').digest('hex');
+}
+
 const VISION_MD = `---
 title: "Product Vision"
 status: new
@@ -43,6 +48,67 @@ function makeDocResponse(overrides: Partial<RemoteDocResponse> = {}): RemoteDocR
   };
 }
 
+function makeCRResponse(overrides: Partial<RemoteCRResponse> = {}): RemoteCRResponse {
+  return {
+    id: 'cr-001',
+    project_id: 'proj-001',
+    path: 'change-requests/CR-001.md',
+    title: 'Add auth flow',
+    body: '## Description\n\nAdd JWT authentication.\n',
+    status: 'pending',
+    author_id: 'user-1',
+    assignee_id: null,
+    target_files: null,
+    closed_at: null,
+    created_at: '2026-01-01T00:00:00.000Z',
+    updated_at: '2026-01-01T00:00:00.000Z',
+    ...overrides,
+  };
+}
+
+function makeBugResponse(overrides: Partial<RemoteBugResponse> = {}): RemoteBugResponse {
+  return {
+    id: 'bug-001',
+    project_id: 'proj-001',
+    path: 'bugs/BUG-001.md',
+    title: 'Search returns stale results',
+    body: '## Steps\n\n1. Search for a term\n2. Results are outdated\n',
+    status: 'open',
+    severity: 'major',
+    author_id: 'user-1',
+    assignee_id: null,
+    closed_at: null,
+    created_at: '2026-02-01T00:00:00.000Z',
+    updated_at: '2026-02-01T00:00:00.000Z',
+    ...overrides,
+  };
+}
+
+const APPLIED_CR = `---
+title: "Add auth flow"
+status: applied
+author: "user"
+created-at: "2026-01-01T00:00:00.000Z"
+---
+
+## Description
+
+Add JWT authentication.
+`;
+
+const RESOLVED_BUG = `---
+title: "Search returns stale results"
+status: resolved
+author: "user"
+created-at: "2026-02-01T00:00:00.000Z"
+---
+
+## Steps
+
+1. Search for a term
+2. Results are outdated
+`;
+
 describe('Sync engine - push', () => {
   let tempDir: string;
   let sdd: SDD;
@@ -67,7 +133,7 @@ describe('Sync engine - push', () => {
     await rm(tempDir, { recursive: true });
   });
 
-  it('pushes pending files and marks them synced', async () => {
+  it('pushes pending files and preserves local frontmatter status', async () => {
     await writeFile(join(tempDir, 'product/vision.md'), VISION_MD, 'utf-8');
 
     const pushResponse: RemoteDocBulkResponse = {
@@ -87,9 +153,9 @@ describe('Sync engine - push', () => {
     expect(result.updated).toBe(0);
     expect(result.pushed).toContain('product/vision.md');
 
-    // Local file should now be synced
+    // Push should not mutate markdown frontmatter status
     const content = await readFile(join(tempDir, 'product/vision.md'), 'utf-8');
-    expect(content).toContain('status: synced');
+    expect(content).toContain('status: new');
 
     // Remote state should be updated
     const state = await readRemoteState(tempDir);
@@ -101,6 +167,20 @@ describe('Sync engine - push', () => {
   it('skips synced files when no paths specified', async () => {
     await writeFile(join(tempDir, 'product/vision.md'), VISION_SYNCED, 'utf-8');
 
+    const { writeRemoteState } = await import('../src/remote/state.js');
+    await writeRemoteState(tempDir, {
+      documents: {
+        'product/vision.md': {
+          remoteId: 'doc-001',
+          remoteVersion: 1,
+          localHash: sha256(VISION_SYNCED),
+          lastSynced: '2026-01-01T00:00:00.000Z',
+        },
+      },
+      changeRequests: {},
+      bugs: {},
+    });
+
     const result = await sdd.push();
     expect(result.pushed).toHaveLength(0);
   });
@@ -123,6 +203,77 @@ describe('Sync engine - push', () => {
     expect(result.pushed).toContain('product/vision.md');
     expect(result.updated).toBe(1);
   });
+
+  it('repopulates remote from local files after a remote reset', async () => {
+    await writeFile(join(tempDir, 'product/vision.md'), VISION_SYNCED, 'utf-8');
+    await mkdir(join(tempDir, 'change-requests'), { recursive: true });
+    await writeFile(join(tempDir, 'change-requests/CR-001.md'), APPLIED_CR, 'utf-8');
+    await mkdir(join(tempDir, 'bugs'), { recursive: true });
+    await writeFile(join(tempDir, 'bugs/BUG-001.md'), RESOLVED_BUG, 'utf-8');
+
+    globalThis.fetch = vi.fn()
+      .mockResolvedValueOnce({
+        ok: true,
+        status: 200,
+        json: async () => ({
+          message: 'Remote project reset.',
+          deleted_documents: 4,
+          deleted_change_requests: 2,
+          deleted_bugs: 1,
+          deleted_comments: 0,
+          deleted_notifications: 0,
+        }),
+      })
+      .mockResolvedValueOnce({
+        ok: true,
+        status: 200,
+        json: async () => ({
+          created: 1,
+          updated: 0,
+          documents: [makeDocResponse()],
+        }),
+      })
+      .mockResolvedValueOnce({
+        ok: true,
+        status: 200,
+        json: async () => ({
+          created: 1,
+          updated: 0,
+          change_requests: [makeCRResponse()],
+        }),
+      })
+      .mockResolvedValueOnce({
+        ok: true,
+        status: 200,
+        json: async () => ({
+          created: 1,
+          updated: 0,
+          bugs: [makeBugResponse()],
+        }),
+      });
+
+    await sdd.remoteReset('test-project');
+
+    const resetState = await readRemoteState(tempDir);
+    expect(resetState.needsReseed).toBe(true);
+    expect(resetState.documents).toEqual({});
+    expect(resetState.changeRequests).toEqual({});
+    expect(resetState.bugs).toEqual({});
+
+    const result = await sdd.push();
+
+    expect(result.created).toBe(3);
+    expect(result.updated).toBe(0);
+    expect(result.pushed).toContain('product/vision.md');
+    expect(result.pushed).toContain('change-requests/CR-001.md');
+    expect(result.pushed).toContain('bugs/BUG-001.md');
+
+    const state = await readRemoteState(tempDir);
+    expect(state.needsReseed).toBe(false);
+    expect(state.documents['product/vision.md']?.remoteId).toBe('doc-001');
+    expect(state.changeRequests?.['change-requests/CR-001.md']?.remoteId).toBe('cr-001');
+    expect(state.bugs?.['bugs/BUG-001.md']?.remoteId).toBe('bug-001');
+  });
 });
 
 describe('Sync engine - pull', () => {
@@ -505,9 +656,9 @@ Easypick is a marketplace for on-demand services.
     });
     await sdd.push();
 
-    // Read file after push (status changed to synced)
+    // Read file after push (status is preserved)
     const afterPush = await readFile(join(tempDir, 'product/vision.md'), 'utf-8');
-    expect(afterPush).toContain('status: synced');
+    expect(afterPush).toContain('status: new');
 
     // Pull — server returns same content, higher version
     globalThis.fetch = vi.fn().mockResolvedValue({