@apollo-annotation/shared 0.1.19 → 0.1.21

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Files changed (138) hide show
  1. package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.d.ts +33 -0
  2. package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.js +86 -0
  3. package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.js.map +1 -0
  4. package/dist/Changes/AddAssemblyFromExternalChange.d.ts +34 -0
  5. package/dist/Changes/AddAssemblyFromExternalChange.js +100 -0
  6. package/dist/Changes/AddAssemblyFromExternalChange.js.map +1 -0
  7. package/dist/Changes/AddAssemblyFromFileChange.d.ts +43 -0
  8. package/dist/Changes/AddAssemblyFromFileChange.js +146 -0
  9. package/dist/Changes/AddAssemblyFromFileChange.js.map +1 -0
  10. package/dist/Changes/AddFeatureChange.d.ts +35 -0
  11. package/dist/Changes/AddFeatureChange.js +169 -0
  12. package/dist/Changes/AddFeatureChange.js.map +1 -0
  13. package/dist/Changes/AddFeaturesFromFileChange.d.ts +32 -0
  14. package/dist/Changes/AddFeaturesFromFileChange.js +76 -0
  15. package/dist/Changes/AddFeaturesFromFileChange.js.map +1 -0
  16. package/dist/Changes/AddRefSeqAliasesChange.d.ts +20 -0
  17. package/dist/Changes/AddRefSeqAliasesChange.js +61 -0
  18. package/dist/Changes/AddRefSeqAliasesChange.js.map +1 -0
  19. package/dist/Changes/DeleteAssemblyChange.d.ts +18 -0
  20. package/dist/Changes/DeleteAssemblyChange.js +72 -0
  21. package/dist/Changes/DeleteAssemblyChange.js.map +1 -0
  22. package/dist/Changes/DeleteFeatureChange.d.ts +42 -0
  23. package/dist/Changes/DeleteFeatureChange.js +143 -0
  24. package/dist/Changes/DeleteFeatureChange.js.map +1 -0
  25. package/dist/Changes/DeleteUserChange.d.ts +25 -0
  26. package/dist/Changes/DeleteUserChange.js +53 -0
  27. package/dist/Changes/DeleteUserChange.js.map +1 -0
  28. package/dist/Changes/FeatureAttributeChange.d.ts +31 -0
  29. package/dist/Changes/FeatureAttributeChange.js +112 -0
  30. package/dist/Changes/FeatureAttributeChange.js.map +1 -0
  31. package/dist/Changes/FromFileBaseChange.d.ts +9 -0
  32. package/dist/Changes/FromFileBaseChange.js +187 -0
  33. package/dist/Changes/FromFileBaseChange.js.map +1 -0
  34. package/dist/Changes/ImportJBrowseConfigChange.d.ts +43 -0
  35. package/dist/Changes/ImportJBrowseConfigChange.js +67 -0
  36. package/dist/Changes/ImportJBrowseConfigChange.js.map +1 -0
  37. package/dist/Changes/LocationEndChange.d.ts +32 -0
  38. package/dist/Changes/LocationEndChange.js +129 -0
  39. package/dist/Changes/LocationEndChange.js.map +1 -0
  40. package/dist/Changes/LocationStartChange.d.ts +32 -0
  41. package/dist/Changes/LocationStartChange.js +129 -0
  42. package/dist/Changes/LocationStartChange.js.map +1 -0
  43. package/dist/Changes/StrandChange.d.ts +31 -0
  44. package/dist/Changes/StrandChange.js +114 -0
  45. package/dist/Changes/StrandChange.js.map +1 -0
  46. package/dist/Changes/TypeChange.d.ts +31 -0
  47. package/dist/Changes/TypeChange.js +114 -0
  48. package/dist/Changes/TypeChange.js.map +1 -0
  49. package/dist/Changes/UserChange.d.ts +25 -0
  50. package/dist/Changes/UserChange.js +51 -0
  51. package/dist/Changes/UserChange.js.map +1 -0
  52. package/dist/Changes/index.d.ts +50 -0
  53. package/dist/Changes/index.js +55 -0
  54. package/dist/Changes/index.js.map +1 -0
  55. package/dist/Checks/CDSCheck.d.ts +8 -0
  56. package/dist/Checks/CDSCheck.js +197 -0
  57. package/dist/Checks/CDSCheck.js.map +1 -0
  58. package/dist/Checks/index.d.ts +1 -0
  59. package/dist/Checks/index.js +5 -0
  60. package/dist/Checks/index.js.map +1 -0
  61. package/dist/Common/index.d.ts +1 -0
  62. package/dist/Common/index.js +5 -0
  63. package/dist/Common/index.js.map +1 -0
  64. package/dist/Common/jwtPayload.d.ts +12 -0
  65. package/dist/Common/jwtPayload.js +16 -0
  66. package/dist/Common/jwtPayload.js.map +1 -0
  67. package/dist/GFF3/gff3ToAnnotationFeature.d.ts +3 -0
  68. package/dist/GFF3/gff3ToAnnotationFeature.js +211 -0
  69. package/dist/GFF3/gff3ToAnnotationFeature.js.map +1 -0
  70. package/dist/GFF3/gff3ToAnnotationFeature.test.d.ts +1 -0
  71. package/dist/GFF3/gff3ToAnnotationFeature.test.js +174 -0
  72. package/dist/GFF3/gff3ToAnnotationFeature.test.js.map +1 -0
  73. package/dist/GFF3/gffReservedKeys.d.ts +5 -0
  74. package/dist/GFF3/gffReservedKeys.js +34 -0
  75. package/dist/GFF3/gffReservedKeys.js.map +1 -0
  76. package/dist/GFF3/index.d.ts +2 -0
  77. package/dist/GFF3/index.js +6 -0
  78. package/dist/GFF3/index.js.map +1 -0
  79. package/dist/Messages.d.ts +28 -0
  80. package/dist/Messages.js +3 -0
  81. package/dist/Messages.js.map +1 -0
  82. package/dist/Operations/GetAssembliesOperation.d.ts +13 -0
  83. package/dist/Operations/GetAssembliesOperation.js +20 -0
  84. package/dist/Operations/GetAssembliesOperation.js.map +1 -0
  85. package/dist/Operations/GetFeaturesOperation.d.ts +26 -0
  86. package/dist/Operations/GetFeaturesOperation.js +42 -0
  87. package/dist/Operations/GetFeaturesOperation.js.map +1 -0
  88. package/dist/Operations/index.d.ts +8 -0
  89. package/dist/Operations/index.js +10 -0
  90. package/dist/Operations/index.js.map +1 -0
  91. package/dist/Validations/CoreValidation.d.ts +17 -0
  92. package/dist/Validations/CoreValidation.js +36 -0
  93. package/dist/Validations/CoreValidation.js.map +1 -0
  94. package/dist/Validations/ParentChildValidation.d.ts +17 -0
  95. package/dist/Validations/ParentChildValidation.js +61 -0
  96. package/dist/Validations/ParentChildValidation.js.map +1 -0
  97. package/dist/Validations/Validation.d.ts +27 -0
  98. package/dist/Validations/Validation.js +27 -0
  99. package/dist/Validations/Validation.js.map +1 -0
  100. package/dist/Validations/ValidationSet.d.ts +24 -0
  101. package/dist/Validations/ValidationSet.js +86 -0
  102. package/dist/Validations/ValidationSet.js.map +1 -0
  103. package/dist/Validations/index.d.ts +4 -0
  104. package/dist/Validations/index.js +8 -0
  105. package/dist/Validations/index.js.map +1 -0
  106. package/dist/Validations/soSequenceTypes.d.ts +2 -0
  107. package/dist/Validations/soSequenceTypes.js +1868 -0
  108. package/dist/Validations/soSequenceTypes.js.map +1 -0
  109. package/dist/index.d.ts +8 -0
  110. package/dist/index.js +12 -0
  111. package/dist/index.js.map +1 -0
  112. package/dist/tsconfig.tsbuildinfo +1 -0
  113. package/dist/util.d.ts +4 -0
  114. package/dist/util.js +102 -0
  115. package/dist/util.js.map +1 -0
  116. package/package.json +8 -5
  117. package/src/Changes/AddAssemblyAndFeaturesFromFileChange.ts +10 -6
  118. package/src/Changes/AddAssemblyFromExternalChange.ts +4 -1
  119. package/src/Changes/AddAssemblyFromFileChange.ts +138 -41
  120. package/src/Changes/ImportJBrowseConfigChange.ts +2 -1
  121. package/src/Checks/CDSCheck.ts +202 -252
  122. package/src/GFF3/gff3ToAnnotationFeature.test.ts +165 -5
  123. package/src/GFF3/gff3ToAnnotationFeature.ts +16 -16
  124. package/src/util.ts +1 -0
  125. package/test_data/braker.gff +13 -0
  126. package/test_data/example01.gff3 +26 -0
  127. package/test_data/example01.json +236 -0
  128. package/test_data/example02.json +225 -0
  129. package/test_data/example04.json +225 -0
  130. package/test_data/example05.gff3 +30 -0
  131. package/test_data/example06.gff3 +30 -0
  132. package/test_data/example07.gff3 +30 -0
  133. package/test_data/gene_mrna.gff3 +4 -0
  134. package/test_data/gene_representations.gff3 +1781 -0
  135. package/test_data/one_cds.gff3 +9 -0
  136. package/test_data/one_cds.json +67 -0
  137. package/test_data/two_cds.gff3 +9 -0
  138. package/test_data/two_cds.json +67 -0
@@ -0,0 +1,1868 @@
1
+ "use strict";
2
+ Object.defineProperty(exports, "__esModule", { value: true });
3
+ const soSequenceTypes = [
4
+ '2A_self_cleaving_peptide_region',
5
+ '4_methylcytosine',
6
+ '5S_SINE_retrotransposon',
7
+ '5_carboxylcytosine',
8
+ '5_formylcytosine',
9
+ '5_hydroxymethylcytosine',
10
+ '5_methylcytosine',
11
+ '7SL_SINE_retrotransposon',
12
+ '8_oxoadenine',
13
+ '8_oxoguanine',
14
+ 'AACCCT_box',
15
+ 'AFLP_fragment',
16
+ 'AP_1_binding_site',
17
+ 'ARIA',
18
+ 'ARRET',
19
+ 'ARS',
20
+ 'ARS_consensus_sequence',
21
+ 'ASPE_primer',
22
+ 'AUG_initiated_uORF',
23
+ 'AU_rich_element',
24
+ 'A_box',
25
+ 'A_box_type_1',
26
+ 'A_box_type_2',
27
+ 'A_minor_RNA_motif',
28
+ 'A_to_C_transversion',
29
+ 'A_to_G_transition',
30
+ 'A_to_T_transversion',
31
+ 'Ace2_UAS',
32
+ 'Alu_deletion',
33
+ 'Alu_insertion',
34
+ 'BAC',
35
+ 'BAC_cloned_genomic_insert',
36
+ 'BAC_end',
37
+ 'BAC_read_contig',
38
+ 'BREd_motif',
39
+ 'BREu_motif',
40
+ 'B_box',
41
+ 'Bel_Pao_LTR_retrotransposon',
42
+ 'Bruno_response_element',
43
+ 'C-D_H_ACA_box_scaRNA',
44
+ 'C-D_H_ACA_box_scaRNA_gene',
45
+ 'CAAT_signal',
46
+ 'CAAX_box',
47
+ 'CACTA_TIR_transposon',
48
+ 'CAGE_cluster',
49
+ 'CAGE_tag',
50
+ 'CArG_box',
51
+ 'CCAAT_motif',
52
+ 'CCA_tail',
53
+ 'CDRE_motif',
54
+ 'CDS',
55
+ 'CDS_extension',
56
+ 'CDS_five_prime_extension',
57
+ 'CDS_fragment',
58
+ 'CDS_independently_known',
59
+ 'CDS_predicted',
60
+ 'CDS_region',
61
+ 'CDS_supported_by_EST_or_cDNA_data',
62
+ 'CDS_supported_by_domain_match_data',
63
+ 'CDS_supported_by_peptide_spectrum_match',
64
+ 'CDS_supported_by_sequence_similarity_data',
65
+ 'CDS_three_prime_extension',
66
+ 'CRE',
67
+ 'CRISPR',
68
+ 'CSL_response_element',
69
+ 'CTCF_binding_site',
70
+ 'CTG_start_codon',
71
+ 'C_D_box_scaRNA',
72
+ 'C_D_box_scaRNA_gene',
73
+ 'C_D_box_snoRNA',
74
+ 'C_D_box_snoRNA_gene',
75
+ 'C_D_box_snoRNA_primary_transcript',
76
+ 'C_box',
77
+ 'C_cluster',
78
+ 'C_gene_segment',
79
+ 'C_region',
80
+ 'C_to_A_transversion',
81
+ 'C_to_G_transversion',
82
+ 'C_to_T_transition',
83
+ 'C_to_T_transition_at_pCpG_site',
84
+ 'ChIP_seq_region',
85
+ 'Copia_LTR_retrotransposon',
86
+ 'CpG_island',
87
+ 'Crick_strand',
88
+ 'Crypton_YR_transposon',
89
+ 'CsrB_RsmB_RNA',
90
+ 'CuRE',
91
+ 'DArT_marker',
92
+ 'DCE',
93
+ 'DCE_SI',
94
+ 'DCE_SII',
95
+ 'DCE_SIII',
96
+ 'DDB_box',
97
+ 'DHU_loop',
98
+ 'DIRS_YR_retrotransposon',
99
+ 'DJ_C_cluster',
100
+ 'DJ_J_C_cluster',
101
+ 'DJ_J_cluster',
102
+ 'DJ_gene_segment',
103
+ 'DMv1_motif',
104
+ 'DMv2_motif',
105
+ 'DMv3_motif',
106
+ 'DMv4_motif',
107
+ 'DMv5_motif',
108
+ 'DNA_aptamer',
109
+ 'DNA_binding_site',
110
+ 'DNA_chromosome',
111
+ 'DNA_constraint_sequence',
112
+ 'DNA_loop',
113
+ 'DNA_loop_anchor',
114
+ 'DNA_motif',
115
+ 'DNA_sequence_secondary_structure',
116
+ 'DNA_transposon',
117
+ 'DNAzyme',
118
+ 'DNaseI_hypersensitive_site',
119
+ 'DPE1_motif',
120
+ 'DPE_motif',
121
+ 'DRE',
122
+ 'DRE_motif',
123
+ 'DSR_motif',
124
+ 'D_DJ_C_cluster',
125
+ 'D_DJ_J_C_cluster',
126
+ 'D_DJ_J_cluster',
127
+ 'D_DJ_cluster',
128
+ 'D_J_C_cluster',
129
+ 'D_J_cluster',
130
+ 'D_cluster',
131
+ 'D_gene_recombination_feature',
132
+ 'D_gene_segment',
133
+ 'D_loop',
134
+ 'DsrA_RNA',
135
+ 'ER_retention_signal',
136
+ 'EST',
137
+ 'EST_match',
138
+ 'E_box_motif',
139
+ 'Endogenous_Retrovirus_LTR_retrotransposon',
140
+ 'FLEX_element',
141
+ 'FRE',
142
+ 'FRT_site',
143
+ 'GAGA_motif',
144
+ 'GATA_box',
145
+ 'GC_rich_promoter_region',
146
+ 'GNA_oligo',
147
+ 'GTT_trinucleotide_repeat',
148
+ 'GT_dinucleotide_repeat',
149
+ 'G_box',
150
+ 'G_quartet',
151
+ 'G_to_A_transition',
152
+ 'G_to_C_transversion',
153
+ 'G_to_T_transversion',
154
+ 'GcvB_RNA',
155
+ 'Gypsy_LTR_retrotransposon',
156
+ 'H2AK5_acetylation_site',
157
+ 'H2AK9_acetylation_site',
158
+ 'H2AZK11_acetylation_site',
159
+ 'H2AZK13_acetylation_site',
160
+ 'H2AZK15_acetylation_site',
161
+ 'H2AZK4_acetylation_site',
162
+ 'H2AZK7_acetylation_site',
163
+ 'H2BK120_acetylation_site',
164
+ 'H2BK12_acetylation_site',
165
+ 'H2BK15_acetylation_site',
166
+ 'H2BK20_acetylation_site',
167
+ 'H2BK5_acetylation_site',
168
+ 'H2BK5_monomethylation_site',
169
+ 'H2B_ubiquitination_site',
170
+ 'H3K14_acetylation_site',
171
+ 'H3K18_acetylation_site',
172
+ 'H3K20_trimethylation_site',
173
+ 'H3K23_acetylation_site',
174
+ 'H3K23_dimethylation_site',
175
+ 'H3K27_acetylation_site',
176
+ 'H3K27_dimethylation_site',
177
+ 'H3K27_methylation_site',
178
+ 'H3K27_monomethylation_site',
179
+ 'H3K27_trimethylation_site',
180
+ 'H3K36_acetylation_site',
181
+ 'H3K36_dimethylation_site',
182
+ 'H3K36_methylation_site',
183
+ 'H3K36_monomethylation_site',
184
+ 'H3K36_trimethylation_site',
185
+ 'H3K4_acetylation_site',
186
+ 'H3K4_dimethylation_site',
187
+ 'H3K4_methylation_site',
188
+ 'H3K4_monomethylation_site',
189
+ 'H3K4_trimethylation',
190
+ 'H3K56_acetylation_site',
191
+ 'H3K79_dimethylation_site',
192
+ 'H3K79_methylation_site',
193
+ 'H3K79_monomethylation_site',
194
+ 'H3K79_trimethylation_site',
195
+ 'H3K9_acetylation_site',
196
+ 'H3K9_dimethylation_site',
197
+ 'H3K9_methylation_site',
198
+ 'H3K9_monomethylation_site',
199
+ 'H3K9_trimethylation_site',
200
+ 'H3R2_dimethylation_site',
201
+ 'H3R2_monomethylation_site',
202
+ 'H4K12_acetylation_site',
203
+ 'H4K16_acetylation_site',
204
+ 'H4K20_monomethylation_site',
205
+ 'H4K4_trimethylation_site',
206
+ 'H4K5_acetylation_site',
207
+ 'H4K8_acetylation_site',
208
+ 'H4K91_acetylation_site',
209
+ 'H4K_acylation_region',
210
+ 'H4R3_dimethylation_site',
211
+ 'HERV_deletion',
212
+ 'HERV_insertion',
213
+ 'HSE',
214
+ 'H_ACA_box_scaRNA',
215
+ 'H_ACA_box_scaRNA_gene',
216
+ 'H_ACA_box_snoRNA',
217
+ 'H_ACA_box_snoRNA_gene',
218
+ 'H_ACA_box_snoRNA_primary_transcript',
219
+ 'H_pseudoknot',
220
+ 'Hoogsteen_base_pair',
221
+ 'I-box',
222
+ 'IG_C_gene',
223
+ 'IG_C_pseudogene',
224
+ 'IG_D_gene',
225
+ 'IG_J_gene',
226
+ 'IG_J_pseudogene',
227
+ 'IG_V_gene',
228
+ 'IG_V_pseudogene',
229
+ 'INR1_motif',
230
+ 'INR_motif',
231
+ 'IRLinv_site',
232
+ 'IRRinv_site',
233
+ 'ISRE',
234
+ 'I_LINE_retrotransposon',
235
+ 'J_C_cluster',
236
+ 'J_cluster',
237
+ 'J_gene_recombination_feature',
238
+ 'J_gene_segment',
239
+ 'J_heptamer',
240
+ 'J_nonamer',
241
+ 'J_spacer',
242
+ 'Jockey_LINE_retrotransposon',
243
+ 'KEN_box',
244
+ 'K_turn_RNA_motif',
245
+ 'L1_LINE_retrotransposon',
246
+ 'LARD',
247
+ 'LINE1_deletion',
248
+ 'LINE1_insertion',
249
+ 'LINE_element',
250
+ 'LNA_oligo',
251
+ 'LOZ1_response_element',
252
+ 'LTR_component',
253
+ 'LTR_retrotransposon',
254
+ 'L_box',
255
+ 'MCB',
256
+ 'MITE',
257
+ 'MNP',
258
+ 'MNV',
259
+ 'MNV_artifact',
260
+ 'MTE',
261
+ 'Mat2P',
262
+ 'Mat3M',
263
+ 'Merlin_TIR_transposon',
264
+ 'MicF_RNA',
265
+ 'Mutator_TIR_transposon',
266
+ 'N2_2_prime_O_dimethylguanosine',
267
+ 'N2_7_2prirme_O_trimethylguanosine',
268
+ 'N2_7_dimethylguanosine',
269
+ 'N2_N2_2_prime_O_trimethylguanosine',
270
+ 'N2_N2_7_trimethylguanosine',
271
+ 'N2_N2_dimethylguanosine',
272
+ 'N2_methylguanosine',
273
+ 'N4_2_prime_O_dimethylcytidine',
274
+ 'N4_N4_2_prime_O_trimethylcytidine',
275
+ 'N4_acetyl_2_prime_O_methylcytidine',
276
+ 'N4_acetylcytidine',
277
+ 'N4_methylcytidine',
278
+ 'N6_2_prime_O_dimethyladenosine',
279
+ 'N6_N6_2_prime_O_trimethyladenosine',
280
+ 'N6_N6_dimethyladenosine',
281
+ 'N6_acetyladenosine',
282
+ 'N6_cis_hydroxyisopentenyl_adenosine',
283
+ 'N6_glycinylcarbamoyladenosine',
284
+ 'N6_hydroxynorvalylcarbamoyladenosine',
285
+ 'N6_isopentenyladenosine',
286
+ 'N6_methyl_N6_threonylcarbamoyladenosine',
287
+ 'N6_methyladenine',
288
+ 'N6_methyladenosine',
289
+ 'N6_threonylcarbamoyladenosine',
290
+ 'NDM2_motif',
291
+ 'NDM3_motif',
292
+ 'NMD_polymorphic_pseudogene_transcript',
293
+ 'NMD_transcript',
294
+ 'NSD_transcript',
295
+ 'N_region',
296
+ 'Ngaro_YR_retrotransposon',
297
+ 'ORF',
298
+ 'Okazaki_fragment',
299
+ 'OxyS_RNA',
300
+ 'PAC',
301
+ 'PAC_end',
302
+ 'PCB',
303
+ 'PCR_product',
304
+ 'PIF_Harbinger_TIR_transposon',
305
+ 'PIP_box',
306
+ 'PNA_oligo',
307
+ 'PSE_motif',
308
+ 'P_TIR_transposon',
309
+ 'Penelope_retrotransposon',
310
+ 'Phage_RNA_Polymerase_Promoter',
311
+ 'Pho7_binding_site',
312
+ 'QTL',
313
+ 'R2_LINE_retrotransposon',
314
+ 'RAPD',
315
+ 'RFLP_fragment',
316
+ 'RH_map',
317
+ 'RNA_6S',
318
+ 'RNA_7SK',
319
+ 'RNA_7SK_gene',
320
+ 'RNA_aptamer',
321
+ 'RNA_chromosome',
322
+ 'RNA_hook_turn',
323
+ 'RNA_internal_loop',
324
+ 'RNA_junction_loop',
325
+ 'RNA_motif',
326
+ 'RNA_polymerase_III_TATA_box',
327
+ 'RNA_polymerase_II_TATA_box',
328
+ 'RNA_sequence_secondary_structure',
329
+ 'RNA_stability_element',
330
+ 'RNA_thermometer',
331
+ 'RNAi_reagent',
332
+ 'RNApol_III_promoter',
333
+ 'RNApol_III_promoter_type_1',
334
+ 'RNApol_III_promoter_type_2',
335
+ 'RNApol_III_promoter_type_3',
336
+ 'RNApol_II_core_promoter',
337
+ 'RNApol_II_promoter',
338
+ 'RNApol_I_promoter',
339
+ 'RNase_MRP_RNA',
340
+ 'RNase_MRP_RNA_gene',
341
+ 'RNase_P_RNA',
342
+ 'RNase_P_RNA_gene',
343
+ 'RRE_RNA',
344
+ 'RR_tract',
345
+ 'RST',
346
+ 'RST_match',
347
+ 'RTE_LINE_retrotransposon',
348
+ 'R_GNA_oligo',
349
+ 'R_LTR_region',
350
+ 'R_five_prime_LTR_region',
351
+ 'R_three_prime_LTR_region',
352
+ 'Retrovirus_LTR_retrotransposon',
353
+ 'Robertsonian_fusion',
354
+ 'RprA_RNA',
355
+ 'SAGE_tag',
356
+ 'SECIS_element',
357
+ 'SHP_box',
358
+ 'SINE_element',
359
+ 'SL10_acceptor_site',
360
+ 'SL11_acceptor_site',
361
+ 'SL12_acceptor_site',
362
+ 'SL1_acceptor_site',
363
+ 'SL2_acceptor_site',
364
+ 'SL3_acceptor_site',
365
+ 'SL4_acceptor_site',
366
+ 'SL5_acceptor_site',
367
+ 'SL6_acceptor_site',
368
+ 'SL7_acceptor_site',
369
+ 'SL8_acceptor_site',
370
+ 'SL9_acceptor_site',
371
+ 'SNP',
372
+ 'SNV',
373
+ 'SNV_artifact',
374
+ 'SP6_RNA_Polymerase_Promoter',
375
+ 'SRP_RNA',
376
+ 'SRP_RNA_gene',
377
+ 'SRP_RNA_primary_transcript',
378
+ 'STREP_motif',
379
+ 'STS',
380
+ 'STS_map',
381
+ 'SUMO_interaction_motif',
382
+ 'SVA_deletion',
383
+ 'SVA_insertion',
384
+ 'S_GNA_oligo',
385
+ 'S_region',
386
+ 'Sap1_recognition_motif',
387
+ 'Shine_Dalgarno_sequence',
388
+ 'T3_RNA_Polymerase_Promoter',
389
+ 'T7_RNA_Polymerase_Promoter',
390
+ 'TATA_box',
391
+ 'TCS_element',
392
+ 'TCT_motif',
393
+ 'TERRA',
394
+ 'TFRS_collection',
395
+ 'TFRS_module',
396
+ 'TF_binding_site',
397
+ 'TNA_oligo',
398
+ 'TRIM',
399
+ 'TR_C_Gene',
400
+ 'TR_D_Gene',
401
+ 'TR_J_Gene',
402
+ 'TR_J_pseudogene',
403
+ 'TR_V_Gene',
404
+ 'TR_V_pseudogene',
405
+ 'TR_box',
406
+ 'TSS',
407
+ 'T_cell_receptor_gene',
408
+ 'T_cell_receptor_pseudogene',
409
+ 'T_loop',
410
+ 'T_to_A_transversion',
411
+ 'T_to_C_transition',
412
+ 'T_to_G_transversion',
413
+ 'Tc1_Mariner_TIR_transposon',
414
+ 'Transib_TIR_transposon',
415
+ 'U11_snRNA',
416
+ 'U12_intron',
417
+ 'U12_snRNA',
418
+ 'U14_snoRNA',
419
+ 'U14_snoRNA_gene',
420
+ 'U14_snoRNA_primary_transcript',
421
+ 'U1_snRNA',
422
+ 'U2_intron',
423
+ 'U2_snRNA',
424
+ 'U3_LTR_region',
425
+ 'U3_five_prime_LTR_region',
426
+ 'U3_snoRNA',
427
+ 'U3_snoRNA_gene',
428
+ 'U3_three_prime_LTR_region',
429
+ 'U4_snRNA',
430
+ 'U4atac_snRNA',
431
+ 'U5_LTR_region',
432
+ 'U5_five_prime_LTR_region',
433
+ 'U5_snRNA',
434
+ 'U5_three_prime_LTR_region',
435
+ 'U6_snRNA',
436
+ 'U6atac_snRNA',
437
+ 'U7_snRNA',
438
+ 'UAA_stop_codon_signal',
439
+ 'UAG_stop_codon_signal',
440
+ 'UGA_stop_codon_signal',
441
+ 'UNAAAC_motif',
442
+ 'UPD',
443
+ 'UST',
444
+ 'UST_match',
445
+ 'UTR',
446
+ 'UTR_intron',
447
+ 'UTR_region',
448
+ 'U_box',
449
+ 'VDJ_C_cluster',
450
+ 'VDJ_J_C_cluster',
451
+ 'VDJ_J_cluster',
452
+ 'VDJ_gene_segment',
453
+ 'VD_gene_segment',
454
+ 'VJ_C_cluster',
455
+ 'VJ_J_C_cluster',
456
+ 'VJ_J_cluster',
457
+ 'VJ_gene_segment',
458
+ 'V_DJ_C_cluster',
459
+ 'V_DJ_J_C_cluster',
460
+ 'V_DJ_J_cluster',
461
+ 'V_DJ_cluster',
462
+ 'V_D_DJ_C_cluster',
463
+ 'V_D_DJ_J_C_cluster',
464
+ 'V_D_DJ_J_cluster',
465
+ 'V_D_DJ_cluster',
466
+ 'V_D_J_C_cluster',
467
+ 'V_D_J_cluster',
468
+ 'V_J_C_cluster',
469
+ 'V_J_cluster',
470
+ 'V_VDJ_C_cluster',
471
+ 'V_VDJ_J_C_cluster',
472
+ 'V_VDJ_J_cluster',
473
+ 'V_VDJ_cluster',
474
+ 'V_VJ_C_cluster',
475
+ 'V_VJ_J_C_cluster',
476
+ 'V_VJ_J_cluster',
477
+ 'V_VJ_cluster',
478
+ 'V_cluster',
479
+ 'V_gene_recombination_feature',
480
+ 'V_gene_segment',
481
+ 'V_heptamer',
482
+ 'V_nonamer',
483
+ 'V_region',
484
+ 'V_spacer',
485
+ 'Viper_YR_retrotransposon',
486
+ 'WC_base_pair',
487
+ 'W_region',
488
+ 'Watson_strand',
489
+ 'X_element',
490
+ 'X_element_combinatorial_repeat',
491
+ 'X_region',
492
+ 'YAC',
493
+ 'YAC_end',
494
+ 'YR_retrotransposon',
495
+ 'Y_RNA',
496
+ 'Y_RNA_gene',
497
+ 'Y_RNA_primary_transcript',
498
+ 'Y_prime_element',
499
+ 'Y_region',
500
+ 'Z1_region',
501
+ 'Z2_region',
502
+ 'Zas1_recognition_motif',
503
+ 'aberrant_processed_transcript',
504
+ 'accessible_DNA_region',
505
+ 'active_peptide',
506
+ 'adaptive_island',
507
+ 'alanine',
508
+ 'alanine_tRNA_primary_transcript',
509
+ 'alanyl_tRNA',
510
+ 'allelic_pseudogene',
511
+ 'allelic_pseudogenic_rRNA',
512
+ 'allelic_pseudogenic_tRNA',
513
+ 'allelically_excluded_gene',
514
+ 'alpha_beta_motif',
515
+ 'alpha_helix',
516
+ 'alternate_sequence_site',
517
+ 'alternatively_spliced_transcript',
518
+ 'amber_stop_codon',
519
+ 'ambisense_ssRNA_viral_sequence',
520
+ 'amino_acid',
521
+ 'amplification_origin',
522
+ 'anchor_binding_site',
523
+ 'anchor_region',
524
+ 'androgen_response_element',
525
+ 'anti_ARRET',
526
+ 'anticodon',
527
+ 'anticodon_loop',
528
+ 'antiparallel_beta_strand',
529
+ 'antisense_RNA',
530
+ 'antisense_lncRNA',
531
+ 'antisense_lncRNA_gene',
532
+ 'antisense_primary_transcript',
533
+ 'apicoplast_chromosome',
534
+ 'apicoplast_gene',
535
+ 'aptamer',
536
+ 'archaeal_intron',
537
+ 'archaeosine',
538
+ 'arginine',
539
+ 'arginine_tRNA_primary_transcript',
540
+ 'arginyl_tRNA',
541
+ 'asparagine',
542
+ 'asparagine_tRNA_primary_transcript',
543
+ 'asparaginyl_tRNA',
544
+ 'aspartic_acid',
545
+ 'aspartic_acid_tRNA_primary_transcript',
546
+ 'aspartyl_tRNA',
547
+ 'assembly',
548
+ 'assembly_component',
549
+ 'assembly_error_correction',
550
+ 'asx_motif',
551
+ 'asx_turn',
552
+ 'asx_turn_left_handed_type_one',
553
+ 'asx_turn_left_handed_type_two',
554
+ 'asx_turn_right_handed_type_one',
555
+ 'asx_turn_right_handed_type_two',
556
+ 'asymmetric_RNA_internal_loop',
557
+ 'attB_site',
558
+ 'attC_site',
559
+ 'attCtn_site',
560
+ 'attI_site',
561
+ 'attL_site',
562
+ 'attP_site',
563
+ 'attR_site',
564
+ 'attenuator',
565
+ 'autocatalytically_spliced_intron',
566
+ 'bacterial_RNApol_promoter',
567
+ 'bacterial_RNApol_promoter_sigma54_element',
568
+ 'bacterial_RNApol_promoter_sigma_70_element',
569
+ 'bacterial_RNApol_promoter_sigma_ecf_element',
570
+ 'bacterial_terminator',
571
+ 'base',
572
+ 'base_call_error_correction',
573
+ 'base_pair',
574
+ 'beta_bulge',
575
+ 'beta_bulge_loop',
576
+ 'beta_bulge_loop_five',
577
+ 'beta_bulge_loop_six',
578
+ 'beta_strand',
579
+ 'beta_turn',
580
+ 'beta_turn_left_handed_type_one',
581
+ 'beta_turn_left_handed_type_two',
582
+ 'beta_turn_right_handed_type_one',
583
+ 'beta_turn_right_handed_type_two',
584
+ 'beta_turn_type_eight',
585
+ 'beta_turn_type_six',
586
+ 'beta_turn_type_six_a',
587
+ 'beta_turn_type_six_a_one',
588
+ 'beta_turn_type_six_a_two',
589
+ 'beta_turn_type_six_b',
590
+ 'bidirectional_promoter',
591
+ 'bidirectional_promoter_lncRNA',
592
+ 'binding_site',
593
+ 'biochemical_region_of_peptide',
594
+ 'biological_region',
595
+ 'biomaterial_region',
596
+ 'biosynthetic_gene_cluster',
597
+ 'blocked_reading_frame',
598
+ 'blunt_end_restriction_enzyme_cleavage_junction',
599
+ 'blunt_end_restriction_enzyme_cleavage_site',
600
+ 'boundary_element',
601
+ 'branch_site',
602
+ 'cDNA_clone',
603
+ 'cDNA_match',
604
+ 'c_terminal_region',
605
+ 'candidate_gene',
606
+ 'canonical_five_prime_splice_site',
607
+ 'canonical_three_prime_splice_site',
608
+ 'cap',
609
+ 'capped_mRNA',
610
+ 'capped_primary_transcript',
611
+ 'cassette_pseudogene',
612
+ 'catalytic_residue',
613
+ 'catmat_left_handed_four',
614
+ 'catmat_left_handed_three',
615
+ 'catmat_right_handed_four',
616
+ 'catmat_right_handed_three',
617
+ 'central_hydrophobic_region_of_signal_peptide',
618
+ 'centromere',
619
+ 'centromere_DNA_Element_I',
620
+ 'centromere_DNA_Element_II',
621
+ 'centromere_DNA_Element_III',
622
+ 'centromeric_repeat',
623
+ 'chimeric_cDNA_clone',
624
+ 'chloroplast_DNA_read',
625
+ 'chloroplast_chromosome',
626
+ 'chromatin_regulatory_region',
627
+ 'chromoplast_chromosome',
628
+ 'chromoplast_gene',
629
+ 'chromosomal_regulatory_element',
630
+ 'chromosomal_structural_element',
631
+ 'chromosomal_translocation',
632
+ 'chromosome',
633
+ 'chromosome_arm',
634
+ 'chromosome_band',
635
+ 'chromosome_breakage_sequence',
636
+ 'chromosome_breakpoint',
637
+ 'chromosome_part',
638
+ 'circular_double_stranded_DNA_chromosome',
639
+ 'circular_double_stranded_RNA_chromosome',
640
+ 'circular_mRNA',
641
+ 'circular_ncRNA',
642
+ 'circular_plasmid',
643
+ 'circular_single_stranded_DNA_chromosome',
644
+ 'circular_single_stranded_RNA_chromosome',
645
+ 'cis_acting_homologous_chromosome_pairing_region',
646
+ 'cis_regulatory_frameshift_element',
647
+ 'cis_regulatory_module',
648
+ 'cis_splice_site',
649
+ 'class_II_RNA',
650
+ 'class_I_RNA',
651
+ 'cleaved_for_gpi_anchor_region',
652
+ 'cleaved_initiator_methionine',
653
+ 'cleaved_peptide_region',
654
+ 'clip',
655
+ 'clone',
656
+ 'clone_end',
657
+ 'clone_insert',
658
+ 'clone_insert_end',
659
+ 'clone_insert_start',
660
+ 'cloned_cDNA_insert',
661
+ 'cloned_genomic_insert',
662
+ 'cloned_region',
663
+ 'coding_conserved_region',
664
+ 'coding_end',
665
+ 'coding_exon',
666
+ 'coding_region_of_exon',
667
+ 'coding_start',
668
+ 'coding_transcript_with_retained_intron',
669
+ 'codon',
670
+ 'coiled_coil',
671
+ 'cointegrated_plasmid',
672
+ 'common_fragile_site',
673
+ 'complex_chromosomal_rearrangement',
674
+ 'complex_operon',
675
+ 'complex_regulon',
676
+ 'complex_structural_alteration',
677
+ 'complex_substitution',
678
+ 'compositionally_biased_region_of_peptide',
679
+ 'conformational_switch',
680
+ 'conjugative_transposon',
681
+ 'consensus_AFLP_fragment',
682
+ 'consensus_gDNA',
683
+ 'consensus_mRNA',
684
+ 'consensus_region',
685
+ 'conserved_region',
686
+ 'constitutive_promoter',
687
+ 'contig',
688
+ 'contig_collection',
689
+ 'contig_read',
690
+ 'copy_number_gain',
691
+ 'copy_number_loss',
692
+ 'copy_number_variation',
693
+ 'core_eukaryotic_promoter_element',
694
+ 'core_prokaryotic_promoter_element',
695
+ 'core_promoter_element',
696
+ 'core_viral_promoter_element',
697
+ 'cosmid',
698
+ 'cross_genome_match',
699
+ 'cryptic_gene',
700
+ 'cryptic_promoter',
701
+ 'cryptic_prophage',
702
+ 'cryptic_splice_site',
703
+ 'cryptogene',
704
+ 'ct_gene',
705
+ 'cyanelle_chromosome',
706
+ 'cyanelle_gene',
707
+ 'cyclic_translocation',
708
+ 'cysteine',
709
+ 'cysteine_tRNA_primary_transcript',
710
+ 'cysteinyl_tRNA',
711
+ 'cytoplasmic_polypeptide_region',
712
+ 'cytosolic_16S_rRNA',
713
+ 'cytosolic_18S_rRNA',
714
+ 'cytosolic_23S_rRNA',
715
+ 'cytosolic_25S_rRNA',
716
+ 'cytosolic_28S_rRNA',
717
+ 'cytosolic_2S_rRNA',
718
+ 'cytosolic_5S_rRNA',
719
+ 'cytosolic_5_8S_rRNA',
720
+ 'cytosolic_LSU_rRNA',
721
+ 'cytosolic_LSU_rRNA_gene',
722
+ 'cytosolic_SSU_rRNA',
723
+ 'cytosolic_SSU_rRNA_gene',
724
+ 'cytosolic_rRNA',
725
+ 'cytosolic_rRNA_16S_gene',
726
+ 'cytosolic_rRNA_18S_gene',
727
+ 'cytosolic_rRNA_23S_gene',
728
+ 'cytosolic_rRNA_25S_gene',
729
+ 'cytosolic_rRNA_28S_gene',
730
+ 'cytosolic_rRNA_2S_gene',
731
+ 'cytosolic_rRNA_5S_gene',
732
+ 'cytosolic_rRNA_5_8S_gene',
733
+ 'cytosolic_rRNA_gene',
734
+ 'dCAPS_primer',
735
+ 'databank_entry',
736
+ 'decayed_exon',
737
+ 'defective_conjugative_transposon',
738
+ 'deficient_translocation',
739
+ 'deletion',
740
+ 'deletion_artifact',
741
+ 'deletion_breakpoint',
742
+ 'deletion_junction',
743
+ 'delins',
744
+ 'destruction_box',
745
+ 'dg_repeat',
746
+ 'dh_repeat',
747
+ 'dicistronic_mRNA',
748
+ 'dicistronic_primary_transcript',
749
+ 'dicistronic_transcript',
750
+ 'dif_site',
751
+ 'dihydrouridine',
752
+ 'dinucleotide_repeat_microsatellite_feature',
753
+ 'direct_repeat',
754
+ 'direct_tandem_duplication',
755
+ 'disabled_reading_frame',
756
+ 'dispersed_repeat',
757
+ 'distal_duplication',
758
+ 'distal_promoter_element',
759
+ 'distant_three_prime_recoding_signal',
760
+ 'double_stranded_DNA_chromosome',
761
+ 'double_stranded_RNA_chromosome',
762
+ 'ds_DNA_viral_sequence',
763
+ 'ds_RNA_viral_sequence',
764
+ 'ds_oligo',
765
+ 'duplicated_pseudogene',
766
+ 'duplication',
767
+ 'duplication_artifact',
768
+ 'dye_terminator_read',
769
+ 'early_origin_of_replication',
770
+ 'edited_CDS',
771
+ 'edited_mRNA',
772
+ 'edited_transcript',
773
+ 'edited_transcript_by_A_to_I_substitution',
774
+ 'edited_transcript_feature',
775
+ 'editing_block',
776
+ 'editing_domain',
777
+ 'endogenous_retroviral_gene',
778
+ 'endonuclease_spliced_intron',
779
+ 'endosomal_localization_signal',
780
+ 'engineered_episome',
781
+ 'engineered_foreign_gene',
782
+ 'engineered_foreign_region',
783
+ 'engineered_foreign_repetitive_element',
784
+ 'engineered_foreign_transposable_element',
785
+ 'engineered_foreign_transposable_element_gene',
786
+ 'engineered_fusion_gene',
787
+ 'engineered_gene',
788
+ 'engineered_insert',
789
+ 'engineered_plasmid',
790
+ 'engineered_region',
791
+ 'engineered_rescue_region',
792
+ 'engineered_tag',
793
+ 'engineered_transposable_element',
794
+ 'enhancer',
795
+ 'enhancerRNA',
796
+ 'enhancer_binding_site',
797
+ 'enhancer_blocking_element',
798
+ 'enhancer_bound_by_factor',
799
+ 'enhancer_trap_construct',
800
+ 'enzymatic_RNA',
801
+ 'enzymatic_RNA_gene',
802
+ 'epigenetically_modified_gene',
803
+ 'epigenetically_modified_region',
804
+ 'epigenomically_modified_region',
805
+ 'episome',
806
+ 'epitope',
807
+ 'epoxyqueuosine',
808
+ 'eukaryotic_promoter',
809
+ 'eukaryotic_terminator',
810
+ 'exemplar_mRNA',
811
+ 'exon',
812
+ 'exon_junction',
813
+ 'exon_of_single_exon_gene',
814
+ 'exon_region',
815
+ 'exonic_splice_enhancer',
816
+ 'exonic_splicing_silencer',
817
+ 'experimental_feature',
818
+ 'experimental_result_region',
819
+ 'experimentally_defined_binding_region',
820
+ 'expressed_sequence_assembly',
821
+ 'expressed_sequence_match',
822
+ 'extended_cis_splice_site',
823
+ 'extended_intronic_splice_region',
824
+ 'external_transcribed_spacer_region',
825
+ 'extrachromosomal_mobile_genetic_element',
826
+ 'extramembrane_polypeptide_region',
827
+ 'fingerprint_map',
828
+ 'five_aminomethyl_two_thiouridine',
829
+ 'five_carbamoylmethyl_two_prime_O_methyluridine',
830
+ 'five_carbamoylmethyluridine',
831
+ 'five_carboxyhydroxymethyl_uridine',
832
+ 'five_carboxyhydroxymethyl_uridine_methyl_ester',
833
+ 'five_carboxymethylaminomethyl_two_prime_O_methyluridine',
834
+ 'five_carboxymethylaminomethyl_two_thiouridine',
835
+ 'five_carboxymethylaminomethyluridine',
836
+ 'five_carboxymethyluridine',
837
+ 'five_formyl_two_prime_O_methylcytidine',
838
+ 'five_formylcytidine',
839
+ 'five_hydroxymethylcytidine',
840
+ 'five_hydroxyuridine',
841
+ 'five_isopentenylaminomethyl_two_prime_O_methyluridine',
842
+ 'five_isopentenylaminomethyl_two_thiouridine',
843
+ 'five_isopentenylaminomethyl_uridine',
844
+ 'five_methoxycarbonylmethyl_two_prime_O_methyluridine',
845
+ 'five_methoxycarbonylmethyl_two_thiouridine',
846
+ 'five_methoxycarbonylmethyluridine',
847
+ 'five_methoxyuridine',
848
+ 'five_methyl_2_thiouridine',
849
+ 'five_methylaminomethyl_two_selenouridine',
850
+ 'five_methylaminomethyl_two_thiouridine',
851
+ 'five_methylaminomethyluridine',
852
+ 'five_methylcytidine',
853
+ 'five_methyldihydrouridine',
854
+ 'five_methyluridine',
855
+ 'five_prime_D_heptamer',
856
+ 'five_prime_D_nonamer',
857
+ 'five_prime_D_recombination_signal_sequence',
858
+ 'five_prime_D_spacer',
859
+ 'five_prime_EST',
860
+ 'five_prime_LTR',
861
+ 'five_prime_LTR_component',
862
+ 'five_prime_RST',
863
+ 'five_prime_UST',
864
+ 'five_prime_UTR',
865
+ 'five_prime_UTR_intron',
866
+ 'five_prime_cis_splice_site',
867
+ 'five_prime_clip',
868
+ 'five_prime_coding_exon',
869
+ 'five_prime_coding_exon_coding_region',
870
+ 'five_prime_coding_exon_noncoding_region',
871
+ 'five_prime_flanking_region',
872
+ 'five_prime_intron',
873
+ 'five_prime_noncoding_exon',
874
+ 'five_prime_open_reading_frame',
875
+ 'five_prime_recoding_site',
876
+ 'five_prime_restriction_enzyme_junction',
877
+ 'five_prime_sticky_end_restriction_enzyme_cleavage_site',
878
+ 'five_prime_terminal_inverted_repeat',
879
+ 'five_taurinomethyl_two_thiouridine',
880
+ 'five_taurinomethyluridine',
881
+ 'five_two_prime_O_dimethylcytidine',
882
+ 'five_two_prime_O_dimethyluridine',
883
+ 'flanking_region',
884
+ 'flanking_repeat',
885
+ 'flanking_three_prime_quadruplet_recoding_signal',
886
+ 'floxed_gene',
887
+ 'foldback_element',
888
+ 'foreign_gene',
889
+ 'foreign_transposable_element',
890
+ 'forkhead_motif',
891
+ 'forward_primer',
892
+ 'fosmid',
893
+ 'four_bp_start_codon',
894
+ 'four_demethylwyosine',
895
+ 'four_thiouridine',
896
+ 'fragile_site',
897
+ 'fragment_assembly',
898
+ 'functional_candidate_gene',
899
+ 'functional_gene_region',
900
+ 'fusion_gene',
901
+ 'gRNA_gene',
902
+ 'galactosyl_queuosine',
903
+ 'gamma_turn',
904
+ 'gamma_turn_classic',
905
+ 'gamma_turn_inverse',
906
+ 'gap',
907
+ 'gene',
908
+ 'gene_array',
909
+ 'gene_cassette',
910
+ 'gene_cassette_array',
911
+ 'gene_component_region',
912
+ 'gene_fragment',
913
+ 'gene_group',
914
+ 'gene_member_region',
915
+ 'gene_rearranged_at_DNA_level',
916
+ 'gene_segment',
917
+ 'gene_silenced_by_DNA_methylation',
918
+ 'gene_silenced_by_DNA_modification',
919
+ 'gene_silenced_by_RNA_interference',
920
+ 'gene_silenced_by_histone_deacetylation',
921
+ 'gene_silenced_by_histone_methylation',
922
+ 'gene_silenced_by_histone_modification',
923
+ 'gene_subarray',
924
+ 'gene_trap_construct',
925
+ 'gene_with_dicistronic_mRNA',
926
+ 'gene_with_dicistronic_primary_transcript',
927
+ 'gene_with_dicistronic_transcript',
928
+ 'gene_with_edited_transcript',
929
+ 'gene_with_mRNA_recoded_by_translational_bypass',
930
+ 'gene_with_mRNA_with_frameshift',
931
+ 'gene_with_non_canonical_start_codon',
932
+ 'gene_with_polyadenylated_mRNA',
933
+ 'gene_with_polycistronic_transcript',
934
+ 'gene_with_recoded_mRNA',
935
+ 'gene_with_start_codon_CUG',
936
+ 'gene_with_stop_codon_read_through',
937
+ 'gene_with_stop_codon_redefined_as_pyrrolysine',
938
+ 'gene_with_stop_codon_redefined_as_selenocysteine',
939
+ 'gene_with_trans_spliced_transcript',
940
+ 'gene_with_transcript_with_translational_frameshift',
941
+ 'genetic_marker',
942
+ 'genomic_DNA_contig',
943
+ 'genomic_DNA_read',
944
+ 'genomic_clone',
945
+ 'genomic_island',
946
+ 'genomically_contaminated_cDNA_clone',
947
+ 'glutamic_acid',
948
+ 'glutamic_acid_tRNA_primary_transcript',
949
+ 'glutamine',
950
+ 'glutamine_tRNA_primary_transcript',
951
+ 'glutaminyl_tRNA',
952
+ 'glutamyl_tRNA',
953
+ 'glycine',
954
+ 'glycine_tRNA_primary_transcript',
955
+ 'glycyl_tRNA',
956
+ 'golden_path',
957
+ 'golden_path_fragment',
958
+ 'group_1_intron_homing_endonuclease_target_region',
959
+ 'group_IIA_intron',
960
+ 'group_IIB_intron',
961
+ 'group_IIC_intron',
962
+ 'group_III_intron',
963
+ 'group_II_intron',
964
+ 'group_I_intron',
965
+ 'guide_RNA',
966
+ 'guide_RNA_region',
967
+ 'hAT_TIR_transposon',
968
+ 'hammerhead_ribozyme',
969
+ 'haplotype_block',
970
+ 'helitron',
971
+ 'helix_turn_helix',
972
+ 'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene',
973
+ 'heritable_phenotypic_marker',
974
+ 'high_identity_region',
975
+ 'histidine',
976
+ 'histidine_tRNA_primary_transcript',
977
+ 'histidyl_tRNA',
978
+ 'histone_2AZ_acetylation_site',
979
+ 'histone_2A_acetylation_site',
980
+ 'histone_2B_acetylation_site',
981
+ 'histone_3_acetylation_site',
982
+ 'histone_4_acetylation_site',
983
+ 'histone_acetylation_site',
984
+ 'histone_acylation_region',
985
+ 'histone_binding_site',
986
+ 'histone_methylation_site',
987
+ 'histone_modification',
988
+ 'histone_ubiqitination_site',
989
+ 'homing_endonuclease_binding_site',
990
+ 'homol_D_box',
991
+ 'homol_E_box',
992
+ 'homologous_chromosome_recognition_and_pairing_locus',
993
+ 'homologous_region',
994
+ 'hpRNA',
995
+ 'hpRNA_gene',
996
+ 'hydrophobic_region_of_peptide',
997
+ 'hydroxywybutosine',
998
+ 'iDNA',
999
+ 'i_motif',
1000
+ 'immature_peptide_region',
1001
+ 'immunoglobulin_gene',
1002
+ 'immunoglobulin_pseudogene',
1003
+ 'immunoglobulin_region',
1004
+ 'imprinting_control_region',
1005
+ 'indel_artifact',
1006
+ 'inducible_promoter',
1007
+ 'inert_DNA_spacer',
1008
+ 'inosine',
1009
+ 'insertion',
1010
+ 'insertion_artifact',
1011
+ 'insertion_breakpoint',
1012
+ 'insertion_sequence',
1013
+ 'insertion_site',
1014
+ 'insulator',
1015
+ 'insulator_binding_site',
1016
+ 'integrated_mobile_genetic_element',
1017
+ 'integrated_plasmid',
1018
+ 'integration_excision_site',
1019
+ 'integron',
1020
+ 'intein',
1021
+ 'intein_encoding_region',
1022
+ 'interband',
1023
+ 'interchromosomal_breakpoint',
1024
+ 'interchromosomal_translocation',
1025
+ 'intergenic_region',
1026
+ 'interior_coding_exon',
1027
+ 'interior_exon',
1028
+ 'interior_intron',
1029
+ 'intermediate_element',
1030
+ 'internal_Shine_Dalgarno_sequence',
1031
+ 'internal_UTR',
1032
+ 'internal_eliminated_sequence',
1033
+ 'internal_guide_sequence',
1034
+ 'internal_ribosome_entry_site',
1035
+ 'internal_transcribed_spacer_region',
1036
+ 'intrachromosomal_breakpoint',
1037
+ 'intrachromosomal_translocation',
1038
+ 'intramembrane_polypeptide_region',
1039
+ 'intrinsically_unstructured_polypeptide_region',
1040
+ 'introgressed_chromosome_region',
1041
+ 'intron',
1042
+ 'intron_base_5',
1043
+ 'intron_domain',
1044
+ 'intronic_regulatory_region',
1045
+ 'intronic_splice_enhancer',
1046
+ 'intronic_splicing_silencer',
1047
+ 'invalidated_cDNA_clone',
1048
+ 'inversion',
1049
+ 'inversion_breakpoint',
1050
+ 'inversion_cum_translocation',
1051
+ 'inversion_site',
1052
+ 'inversion_site_part',
1053
+ 'inverted_intrachromosomal_transposition',
1054
+ 'inverted_repeat',
1055
+ 'inverted_tandem_duplication',
1056
+ 'iron_repressed_GATA_element',
1057
+ 'iron_responsive_element',
1058
+ 'isoleucine',
1059
+ 'isoleucine_tRNA_primary_transcript',
1060
+ 'isoleucyl_tRNA',
1061
+ 'isomiR',
1062
+ 'isowyosine',
1063
+ 'junction',
1064
+ 'kinetoplast_gene',
1065
+ 'knob',
1066
+ 'kozak_sequence',
1067
+ 'lambda_vector',
1068
+ 'lariat_intron',
1069
+ 'late_origin_of_replication',
1070
+ 'left_handed_peptide_helix',
1071
+ 'leucine',
1072
+ 'leucine_tRNA_primary_transcript',
1073
+ 'leucoplast_chromosome',
1074
+ 'leucoplast_gene',
1075
+ 'leucyl_tRNA',
1076
+ 'ligand_binding_site',
1077
+ 'ligation_based_read',
1078
+ 'lincRNA',
1079
+ 'lincRNA_gene',
1080
+ 'linear_double_stranded_DNA_chromosome',
1081
+ 'linear_double_stranded_RNA_chromosome',
1082
+ 'linear_plasmid',
1083
+ 'linear_single_stranded_DNA_chromosome',
1084
+ 'linear_single_stranded_RNA_chromosome',
1085
+ 'linkage_group',
1086
+ 'lipoprotein_signal_peptide',
1087
+ 'lncRNA',
1088
+ 'lncRNA_gene',
1089
+ 'lncRNA_primary_transcript',
1090
+ 'lncRNA_with_retained_intron',
1091
+ 'loR',
1092
+ 'locus_control_region',
1093
+ 'long_terminal_repeat',
1094
+ 'long_terminal_repeat_transcript',
1095
+ 'loop',
1096
+ 'low_complexity_region',
1097
+ 'loxP_site',
1098
+ 'lysidine',
1099
+ 'lysine',
1100
+ 'lysine_tRNA_primary_transcript',
1101
+ 'lysosomal_localization_signal',
1102
+ 'lysyl_tRNA',
1103
+ 'mRNA',
1104
+ 'mRNA_contig',
1105
+ 'mRNA_read',
1106
+ 'mRNA_recoded_by_codon_redefinition',
1107
+ 'mRNA_recoded_by_translational_bypass',
1108
+ 'mRNA_region',
1109
+ 'mRNA_with_frameshift',
1110
+ 'mRNA_with_minus_1_frameshift',
1111
+ 'mRNA_with_minus_2_frameshift',
1112
+ 'mRNA_with_plus_1_frameshift',
1113
+ 'mRNA_with_plus_2_frameshift',
1114
+ 'macronuclear_chromosome',
1115
+ 'macronucleus_destined_segment',
1116
+ 'major_TSS',
1117
+ 'mannosyl_queuosine',
1118
+ 'match',
1119
+ 'match_part',
1120
+ 'maternal_uniparental_disomy',
1121
+ 'maternally_imprinted_gene',
1122
+ 'mathematically_defined_repeat',
1123
+ 'mating_type_M_box',
1124
+ 'mating_type_region',
1125
+ 'mating_type_region_motif',
1126
+ 'mating_type_region_replication_fork_barrier',
1127
+ 'matrix_attachment_site',
1128
+ 'mature_protein_region',
1129
+ 'mature_protein_region_of_CDS',
1130
+ 'mature_transcript',
1131
+ 'mature_transcript_region',
1132
+ 'maxicircle',
1133
+ 'maxicircle_gene',
1134
+ 'meiotic_recombination_region',
1135
+ 'membrane_peptide_loop',
1136
+ 'membrane_structure',
1137
+ 'metabolic_island',
1138
+ 'metal_binding_site',
1139
+ 'methionine',
1140
+ 'methionine_tRNA_primary_transcript',
1141
+ 'methionyl_tRNA',
1142
+ 'methylated_DNA_base_feature',
1143
+ 'methylated_adenine',
1144
+ 'methylated_cytosine',
1145
+ 'methylation_guide_snoRNA',
1146
+ 'methylation_guide_snoRNA_gene',
1147
+ 'methylation_guide_snoRNA_primary_transcript',
1148
+ 'methylinosine',
1149
+ 'methylwyosine',
1150
+ 'miRNA',
1151
+ 'miRNA_antiguide',
1152
+ 'miRNA_gene',
1153
+ 'miRNA_loop',
1154
+ 'miRNA_primary_transcript',
1155
+ 'miRNA_primary_transcript_region',
1156
+ 'miRNA_stem',
1157
+ 'miRNA_target_site',
1158
+ 'miR_encoding_Y_RNA_primary_transcript',
1159
+ 'miR_encoding_lncRNA_primary_transcript',
1160
+ 'miR_encoding_shRNA_primary_transcript',
1161
+ 'miR_encoding_snoRNA_primary_transcript',
1162
+ 'miR_encoding_tRNA_primary_transcript',
1163
+ 'miR_encoding_vaultRNA_primary_transcript',
1164
+ 'miRtron',
1165
+ 'microarray_oligo',
1166
+ 'micronuclear_chromosome',
1167
+ 'microsatellite',
1168
+ 'mini_exon_donor_RNA',
1169
+ 'mini_gene',
1170
+ 'minicircle',
1171
+ 'minicircle_gene',
1172
+ 'minisatellite',
1173
+ 'minor_TSS',
1174
+ 'minus_10_signal',
1175
+ 'minus_12_signal',
1176
+ 'minus_1_translational_frameshift',
1177
+ 'minus_24_signal',
1178
+ 'minus_2_translational_frameshift',
1179
+ 'minus_35_signal',
1180
+ 'mitochondrial_DNA_read',
1181
+ 'mitochondrial_D_loop',
1182
+ 'mitochondrial_chromosome',
1183
+ 'mitochondrial_contig',
1184
+ 'mitochondrial_control_region',
1185
+ 'mitochondrial_supercontig',
1186
+ 'mitochondrial_targeting_signal',
1187
+ 'mitotic_recombination_region',
1188
+ 'moR',
1189
+ 'mobile_element_deletion',
1190
+ 'mobile_element_insertion',
1191
+ 'mobile_genetic_element',
1192
+ 'mobile_intron',
1193
+ 'modified_DNA_base',
1194
+ 'modified_L_alanine',
1195
+ 'modified_L_arginine',
1196
+ 'modified_L_asparagine',
1197
+ 'modified_L_aspartic_acid',
1198
+ 'modified_L_cysteine',
1199
+ 'modified_L_glutamic_acid',
1200
+ 'modified_L_glutamine',
1201
+ 'modified_L_histidine',
1202
+ 'modified_L_isoleucine',
1203
+ 'modified_L_leucine',
1204
+ 'modified_L_lysine',
1205
+ 'modified_L_methionine',
1206
+ 'modified_L_phenylalanine',
1207
+ 'modified_L_proline',
1208
+ 'modified_L_selenocysteine',
1209
+ 'modified_L_serine',
1210
+ 'modified_L_threonine',
1211
+ 'modified_L_tryptophan',
1212
+ 'modified_L_tyrosine',
1213
+ 'modified_L_valine',
1214
+ 'modified_RNA_base_feature',
1215
+ 'modified_adenine',
1216
+ 'modified_adenosine',
1217
+ 'modified_amino_acid_feature',
1218
+ 'modified_cytidine',
1219
+ 'modified_cytosine',
1220
+ 'modified_glycine',
1221
+ 'modified_guanine',
1222
+ 'modified_guanosine',
1223
+ 'modified_inosine',
1224
+ 'modified_uridine',
1225
+ 'molecular_contact_region',
1226
+ 'monocistronic_mRNA',
1227
+ 'monocistronic_primary_transcript',
1228
+ 'monocistronic_transcript',
1229
+ 'monomeric_repeat',
1230
+ 'morpholino_oligo',
1231
+ 'mt_LSU_rRNA',
1232
+ 'mt_LSU_rRNA_gene',
1233
+ 'mt_SSU_rRNA',
1234
+ 'mt_SSU_rRNA_gene',
1235
+ 'mt_gene',
1236
+ 'mt_rRNA',
1237
+ 'mt_rRNA_gene',
1238
+ 'mt_tRNA',
1239
+ 'multiplexing_sequence_identifier',
1240
+ 'mutated_variant_site',
1241
+ 'mutational_hotspot',
1242
+ 'n_terminal_region',
1243
+ 'natural_plasmid',
1244
+ 'natural_transposable_element',
1245
+ 'natural_variant_site',
1246
+ 'ncRNA',
1247
+ 'ncRNA_gene',
1248
+ 'nc_conserved_region',
1249
+ 'nc_primary_transcript',
1250
+ 'negative_sense_ssRNA_viral_sequence',
1251
+ 'negatively_autoregulated_gene',
1252
+ 'nested_repeat',
1253
+ 'nested_tandem_repeat',
1254
+ 'nested_transposon',
1255
+ 'no_output',
1256
+ 'no_sequence_alteration',
1257
+ 'non_AUG_initiated_uORF',
1258
+ 'non_LTR_retrotransposon',
1259
+ 'non_LTR_retrotransposon_polymeric_tract',
1260
+ 'non_adjacent_residues',
1261
+ 'non_allelic_homologous_recombination_region',
1262
+ 'non_canonical_five_prime_splice_site',
1263
+ 'non_canonical_start_codon',
1264
+ 'non_canonical_three_prime_splice_site',
1265
+ 'non_complimentary_stem',
1266
+ 'non_cytoplasmic_polypeptide_region',
1267
+ 'non_processed_pseudogene',
1268
+ 'non_terminal_residue',
1269
+ 'non_transcribed_region',
1270
+ 'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene',
1271
+ 'noncoding_exon',
1272
+ 'noncoding_region_of_exon',
1273
+ 'novel_sequence_insertion',
1274
+ 'nuclear_chromosome',
1275
+ 'nuclear_export_signal',
1276
+ 'nuclear_gene',
1277
+ 'nuclear_localization_signal',
1278
+ 'nuclear_mt_pseudogene',
1279
+ 'nuclear_rim_localization_signal',
1280
+ 'nuclease_binding_site',
1281
+ 'nuclease_hypersensitive_site',
1282
+ 'nuclease_sensitive_site',
1283
+ 'nucleomorph_gene',
1284
+ 'nucleomorphic_chromosome',
1285
+ 'nucleotide_binding_site',
1286
+ 'nucleotide_cleavage_site',
1287
+ 'nucleotide_match',
1288
+ 'nucleotide_motif',
1289
+ 'nucleotide_to_protein_binding_site',
1290
+ 'ochre_stop_codon',
1291
+ 'octamer_motif',
1292
+ 'oligo',
1293
+ 'oligo_U_tail',
1294
+ 'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine',
1295
+ 'one_methyladenosine',
1296
+ 'one_methylguanosine',
1297
+ 'one_methylinosine',
1298
+ 'one_methylpseudouridine',
1299
+ 'one_two_prime_O_dimethyladenosine',
1300
+ 'one_two_prime_O_dimethylguanosine',
1301
+ 'one_two_prime_O_dimethylinosine',
1302
+ 'opal_stop_codon',
1303
+ 'open_chromatin_region',
1304
+ 'operator',
1305
+ 'operon',
1306
+ 'oriC',
1307
+ 'oriT',
1308
+ 'oriV',
1309
+ 'origin_of_replication',
1310
+ 'orphan_CDS',
1311
+ 'orthologous_region',
1312
+ 'outron',
1313
+ 'overlapping_EST_set',
1314
+ 'overlapping_feature_set',
1315
+ 'paired_end_fragment',
1316
+ 'parallel_beta_strand',
1317
+ 'paralogous_region',
1318
+ 'partial_genomic_sequence_assembly',
1319
+ 'partially_processed_cDNA_clone',
1320
+ 'paternal_uniparental_disomy',
1321
+ 'paternally_imprinted_gene',
1322
+ 'pathogenic_island',
1323
+ 'peptide_coil',
1324
+ 'peptide_helix',
1325
+ 'peptide_localization_signal',
1326
+ 'peroxywybutosine',
1327
+ 'phage_sequence',
1328
+ 'phagemid',
1329
+ 'phenylalanine',
1330
+ 'phenylalanine_tRNA_primary_transcript',
1331
+ 'phenylalanyl_tRNA',
1332
+ 'pheromone_response_element',
1333
+ 'phosphorylation_site',
1334
+ 'piRNA',
1335
+ 'piRNA_gene',
1336
+ 'pi_helix',
1337
+ 'piggyBac_TIR_transposon',
1338
+ 'plasmid',
1339
+ 'plasmid_gene',
1340
+ 'plasmid_vector',
1341
+ 'plastid_LSU_rRNA',
1342
+ 'plastid_LSU_rRNA_gene',
1343
+ 'plastid_SSU_rRNA',
1344
+ 'plastid_SSU_rRNA_gene',
1345
+ 'plastid_gene',
1346
+ 'plastid_rRNA',
1347
+ 'plastid_rRNA_gene',
1348
+ 'plus_1_translational_frameshift',
1349
+ 'plus_2_translational_frameshift',
1350
+ 'point_centromere',
1351
+ 'point_mutation',
1352
+ 'polinton',
1353
+ 'polyA_primed_cDNA_clone',
1354
+ 'polyA_sequence',
1355
+ 'polyA_signal_sequence',
1356
+ 'polyA_site',
1357
+ 'polyA_site_cluster',
1358
+ 'polyadenylated_mRNA',
1359
+ 'polycistronic_mRNA',
1360
+ 'polycistronic_primary_transcript',
1361
+ 'polycistronic_transcript',
1362
+ 'polymerase_synthesis_read',
1363
+ 'polymorphic_pseudogene',
1364
+ 'polymorphic_pseudogene_processed_transcript',
1365
+ 'polymorphic_pseudogene_with_retained_intron',
1366
+ 'polypeptide',
1367
+ 'polypeptide_DNA_contact',
1368
+ 'polypeptide_binding_motif',
1369
+ 'polypeptide_calcium_ion_contact_site',
1370
+ 'polypeptide_catalytic_motif',
1371
+ 'polypeptide_cobalt_ion_contact_site',
1372
+ 'polypeptide_conserved_motif',
1373
+ 'polypeptide_conserved_region',
1374
+ 'polypeptide_copper_ion_contact_site',
1375
+ 'polypeptide_domain',
1376
+ 'polypeptide_iron_ion_contact_site',
1377
+ 'polypeptide_ligand_contact',
1378
+ 'polypeptide_magnesium_ion_contact_site',
1379
+ 'polypeptide_manganese_ion_contact_site',
1380
+ 'polypeptide_metal_contact',
1381
+ 'polypeptide_molybdenum_ion_contact_site',
1382
+ 'polypeptide_motif',
1383
+ 'polypeptide_nest_left_right_motif',
1384
+ 'polypeptide_nest_motif',
1385
+ 'polypeptide_nest_right_left_motif',
1386
+ 'polypeptide_nickel_ion_contact_site',
1387
+ 'polypeptide_region',
1388
+ 'polypeptide_repeat',
1389
+ 'polypeptide_secondary_structure',
1390
+ 'polypeptide_sequencing_information',
1391
+ 'polypeptide_structural_motif',
1392
+ 'polypeptide_structural_region',
1393
+ 'polypeptide_tungsten_ion_contact_site',
1394
+ 'polypeptide_turn_motif',
1395
+ 'polypeptide_variation_site',
1396
+ 'polypeptide_zinc_ion_contact_site',
1397
+ 'polypyrimidine_tract',
1398
+ 'positional_candidate_gene',
1399
+ 'positive_sense_ssRNA_viral_sequence',
1400
+ 'positively_autoregulated_gene',
1401
+ 'possible_assembly_error',
1402
+ 'possible_base_call_error',
1403
+ 'post_translationally_modified_region',
1404
+ 'post_translationally_regulated_gene',
1405
+ 'pre_edited_mRNA',
1406
+ 'pre_edited_region',
1407
+ 'pre_miRNA',
1408
+ 'predicted_gene',
1409
+ 'predicted_transcript',
1410
+ 'presence_absence_variation',
1411
+ 'priRNA',
1412
+ 'primary_transcript',
1413
+ 'primary_transcript_region',
1414
+ 'primer',
1415
+ 'primer_binding_site',
1416
+ 'primer_match',
1417
+ 'probe',
1418
+ 'processed_pseudogene',
1419
+ 'processed_pseudogenic_rRNA',
1420
+ 'processed_pseudogenic_tRNA',
1421
+ 'processed_transcript',
1422
+ 'prokaryotic_promoter',
1423
+ 'proline',
1424
+ 'proline_tRNA_primary_transcript',
1425
+ 'prolyl_tRNA',
1426
+ 'promoter',
1427
+ 'promoter_element',
1428
+ 'promoter_flanking_region',
1429
+ 'promoter_targeting_sequence',
1430
+ 'promoter_trap_construct',
1431
+ 'propeptide',
1432
+ 'propeptide_cleavage_site',
1433
+ 'propeptide_region_of_CDS',
1434
+ 'prophage',
1435
+ 'proplastid_gene',
1436
+ 'protease_site',
1437
+ 'protein_binding_site',
1438
+ 'protein_coding_gene',
1439
+ 'protein_coding_primary_transcript',
1440
+ 'protein_hmm_match',
1441
+ 'protein_match',
1442
+ 'protein_protein_contact',
1443
+ 'protein_stability_element',
1444
+ 'proviral_gene',
1445
+ 'proviral_region',
1446
+ 'proximal_promoter_element',
1447
+ 'pseudogene',
1448
+ 'pseudogene_by_unequal_crossing_over',
1449
+ 'pseudogene_processed_transcript',
1450
+ 'pseudogenic_CDS',
1451
+ 'pseudogenic_exon',
1452
+ 'pseudogenic_gene_segment',
1453
+ 'pseudogenic_rRNA',
1454
+ 'pseudogenic_region',
1455
+ 'pseudogenic_tRNA',
1456
+ 'pseudogenic_transcript',
1457
+ 'pseudogenic_transcript_with_retained_intron',
1458
+ 'pseudoknot',
1459
+ 'pseudouridine',
1460
+ 'pseudouridylation_guide_snoRNA',
1461
+ 'pseudouridylation_guide_snoRNA_gene',
1462
+ 'pumilio_response_element',
1463
+ 'purine_to_pyrimidine_transversion',
1464
+ 'purine_transition',
1465
+ 'pyrimidine_to_purine_transversion',
1466
+ 'pyrimidine_transition',
1467
+ 'pyrosequenced_read',
1468
+ 'pyrrolysine',
1469
+ 'pyrrolysine_tRNA_primary_transcript',
1470
+ 'pyrrolysyl_tRNA',
1471
+ 'queuosine',
1472
+ 'rDNA_intergenic_spacer_element',
1473
+ 'rDNA_replication_fork_barrier',
1474
+ 'rRNA',
1475
+ 'rRNA_21S_gene',
1476
+ 'rRNA_cleavage_RNA',
1477
+ 'rRNA_cleavage_snoRNA_primary_transcript',
1478
+ 'rRNA_gene',
1479
+ 'rRNA_large_subunit_primary_transcript',
1480
+ 'rRNA_primary_transcript',
1481
+ 'rRNA_primary_transcript_region',
1482
+ 'rRNA_small_subunit_primary_transcript',
1483
+ 'rare_fragile_site',
1484
+ 'rasiRNA',
1485
+ 'read',
1486
+ 'read_pair',
1487
+ 'reading_frame',
1488
+ 'reagent',
1489
+ 'rearrangement_region',
1490
+ 'reciprocal_chromosomal_translocation',
1491
+ 'recoded_codon',
1492
+ 'recoded_mRNA',
1493
+ 'recoding_pseudoknot',
1494
+ 'recoding_stimulatory_region',
1495
+ 'recombination_enhancer',
1496
+ 'recombination_feature',
1497
+ 'recombination_feature_of_rearranged_gene',
1498
+ 'recombination_hotspot',
1499
+ 'recombination_regulatory_region',
1500
+ 'recombination_signal_sequence',
1501
+ 'recombinationally_inverted_gene',
1502
+ 'recombinationally_rearranged_gene',
1503
+ 'recombinationally_rearranged_vertebrate_immune_system_gene',
1504
+ 'recursive_splice_site',
1505
+ 'ref_miRNA',
1506
+ 'region',
1507
+ 'regional_centromere',
1508
+ 'regional_centromere_central_core',
1509
+ 'regional_centromere_inner_repeat_region',
1510
+ 'regional_centromere_outer_repeat_region',
1511
+ 'regional_centromere_outer_repeat_transcript',
1512
+ 'regulatory_promoter_element',
1513
+ 'regulatory_region',
1514
+ 'regulon',
1515
+ 'remark',
1516
+ 'repeat_component',
1517
+ 'repeat_fragment',
1518
+ 'repeat_instability_region',
1519
+ 'repeat_region',
1520
+ 'repeat_unit',
1521
+ 'replication_regulatory_region',
1522
+ 'replication_start_site',
1523
+ 'replicon',
1524
+ 'rescue_gene',
1525
+ 'rescue_mini_gene',
1526
+ 'rescue_region',
1527
+ 'resolution_site',
1528
+ 'response_element',
1529
+ 'restriction_enzyme_assembly_scar',
1530
+ 'restriction_enzyme_binding_site',
1531
+ 'restriction_enzyme_cleavage_junction',
1532
+ 'restriction_enzyme_five_prime_single_strand_overhang',
1533
+ 'restriction_enzyme_recognition_site',
1534
+ 'restriction_enzyme_region',
1535
+ 'restriction_enzyme_single_strand_overhang',
1536
+ 'restriction_enzyme_three_prime_single_strand_overhang',
1537
+ 'restriction_fragment',
1538
+ 'retinoic_acid_responsive_element',
1539
+ 'retrogene',
1540
+ 'retron',
1541
+ 'retrotransposon',
1542
+ 'reverse_Hoogsteen_base_pair',
1543
+ 'reverse_primer',
1544
+ 'rho_dependent_bacterial_terminator',
1545
+ 'rho_independent_bacterial_terminator',
1546
+ 'ribonuclease_site',
1547
+ 'ribosome_entry_site',
1548
+ 'riboswitch',
1549
+ 'ribothymidine',
1550
+ 'ribozyme',
1551
+ 'ribozyme_gene',
1552
+ 'right_handed_peptide_helix',
1553
+ 'sORF',
1554
+ 'sarcin_like_RNA_motif',
1555
+ 'satellite_DNA',
1556
+ 'sbRNA',
1557
+ 'sbRNA_gene',
1558
+ 'scRNA',
1559
+ 'scRNA_gene',
1560
+ 'scRNA_primary_transcript',
1561
+ 'scaRNA',
1562
+ 'scaRNA_gene',
1563
+ 'schellmann_loop',
1564
+ 'schellmann_loop_seven',
1565
+ 'schellmann_loop_six',
1566
+ 'selection_marker',
1567
+ 'selenocysteine',
1568
+ 'selenocysteine_tRNA_primary_transcript',
1569
+ 'selenocysteinyl_tRNA',
1570
+ 'self_cleaving_ribozyme',
1571
+ 'sense_intronic_ncRNA',
1572
+ 'sense_intronic_ncRNA_gene',
1573
+ 'sense_overlap_ncRNA',
1574
+ 'sense_overlap_ncRNA_gene',
1575
+ 'sequence_alteration',
1576
+ 'sequence_alteration_artifact',
1577
+ 'sequence_assembly',
1578
+ 'sequence_comparison',
1579
+ 'sequence_conflict',
1580
+ 'sequence_difference',
1581
+ 'sequence_feature',
1582
+ 'sequence_length_alteration',
1583
+ 'sequence_motif',
1584
+ 'sequence_rearrangement_feature',
1585
+ 'sequence_secondary_structure',
1586
+ 'sequence_uncertainty',
1587
+ 'sequencing_primer',
1588
+ 'serine',
1589
+ 'serine_tRNA_primary_transcript',
1590
+ 'serine_threonine_motif',
1591
+ 'serine_threonine_staple_motif',
1592
+ 'serine_threonine_turn',
1593
+ 'seryl_tRNA',
1594
+ 'seven_aminomethyl_seven_deazaguanosine',
1595
+ 'seven_cyano_seven_deazaguanosine',
1596
+ 'seven_deazaguanosine',
1597
+ 'seven_methylguanine',
1598
+ 'seven_methylguanosine',
1599
+ 'sgRNA',
1600
+ 'shRNA',
1601
+ 'shRNA_primary_transcript',
1602
+ 'shadow_enhancer',
1603
+ 'short_tandem_repeat_variation',
1604
+ 'siRNA',
1605
+ 'signal_anchor',
1606
+ 'signal_peptide',
1607
+ 'signal_peptide_region_of_CDS',
1608
+ 'signature',
1609
+ 'silenced_gene',
1610
+ 'silencer',
1611
+ 'silent_mating_type_cassette_array',
1612
+ 'simple_operon',
1613
+ 'simple_regulon',
1614
+ 'simple_sequence_length_variation',
1615
+ 'single_strand_restriction_enzyme_cleavage_site',
1616
+ 'single_stranded_DNA_chromosome',
1617
+ 'single_stranded_RNA_chromosome',
1618
+ 'sisRNA',
1619
+ 'site_specific_recombination_target_region',
1620
+ 'smFISH_probe',
1621
+ 'small_regulatory_ncRNA',
1622
+ 'snRNA',
1623
+ 'snRNA_gene',
1624
+ 'snRNA_primary_transcript',
1625
+ 'sncRNA',
1626
+ 'sncRNA_gene',
1627
+ 'snoRNA',
1628
+ 'snoRNA_gene',
1629
+ 'snoRNA_primary_transcript',
1630
+ 'solo_LTR',
1631
+ 'sonicate_fragment',
1632
+ 'specific_recombination_site',
1633
+ 'splice_enhancer',
1634
+ 'splice_junction',
1635
+ 'splice_region',
1636
+ 'splice_site',
1637
+ 'spliced_leader_RNA',
1638
+ 'spliceosomal_intron',
1639
+ 'spliceosomal_intron_region',
1640
+ 'splicing_regulatory_region',
1641
+ 'spot_42_RNA',
1642
+ 'spurious_protein',
1643
+ 'ss_RNA_viral_sequence',
1644
+ 'ss_oligo',
1645
+ 'st_turn_left_handed_type_one',
1646
+ 'st_turn_left_handed_type_two',
1647
+ 'st_turn_right_handed_type_one',
1648
+ 'st_turn_right_handed_type_two',
1649
+ 'start_codon',
1650
+ 'stem',
1651
+ 'stem_loop',
1652
+ 'stem_loop_region',
1653
+ 'sterol_regulatory_element',
1654
+ 'sticky_end_restriction_enzyme_cleavage_site',
1655
+ 'stop_codon',
1656
+ 'stop_codon_read_through',
1657
+ 'stop_codon_redefined_as_pyrrolysine',
1658
+ 'stop_codon_redefined_as_selenocysteine',
1659
+ 'stop_codon_signal',
1660
+ 'structural_alteration',
1661
+ 'substitution',
1662
+ 'substitution_artifact',
1663
+ 'subtelomere',
1664
+ 'sugar_edge_base_pair',
1665
+ 'supercontig',
1666
+ 'symbiosis_island',
1667
+ 'symmetric_RNA_internal_loop',
1668
+ 'syntenic_region',
1669
+ 'synthetic_oligo',
1670
+ 'tRNA',
1671
+ 'tRNA_SINE_retrotransposon',
1672
+ 'tRNA_gene',
1673
+ 'tRNA_intron',
1674
+ 'tRNA_primary_transcript',
1675
+ 'tRNA_region',
1676
+ 'tag',
1677
+ 'tandem_duplication',
1678
+ 'tandem_repeat',
1679
+ 'target_site_duplication',
1680
+ 'targeting_vector',
1681
+ 'tasiRNA',
1682
+ 'tasiRNA_primary_transcript',
1683
+ 'teb1_recognition_motif',
1684
+ 'telomerase_RNA',
1685
+ 'telomerase_RNA_gene',
1686
+ 'telomere',
1687
+ 'telomeric_D_loop',
1688
+ 'telomeric_repeat',
1689
+ 'telomeric_transcript',
1690
+ 'template_region',
1691
+ 'terminal_inverted_repeat',
1692
+ 'terminal_inverted_repeat_element',
1693
+ 'terminal_repeat',
1694
+ 'terminator',
1695
+ 'terminator_of_type_2_RNApol_III_promoter',
1696
+ 'tetraloop',
1697
+ 'tetranucleotide_repeat_microsatellite_feature',
1698
+ 'three_methylcytidine',
1699
+ 'three_methylpseudouridine',
1700
+ 'three_methyluridine',
1701
+ 'three_prime_D_heptamer',
1702
+ 'three_prime_D_nonamer',
1703
+ 'three_prime_D_recombination_signal_sequence',
1704
+ 'three_prime_D_spacer',
1705
+ 'three_prime_EST',
1706
+ 'three_prime_LTR',
1707
+ 'three_prime_LTR_component',
1708
+ 'three_prime_RACE_clone',
1709
+ 'three_prime_RST',
1710
+ 'three_prime_UST',
1711
+ 'three_prime_UTR',
1712
+ 'three_prime_UTR_intron',
1713
+ 'three_prime_cis_splice_site',
1714
+ 'three_prime_clip',
1715
+ 'three_prime_coding_exon',
1716
+ 'three_prime_coding_exon_coding_region',
1717
+ 'three_prime_coding_exon_noncoding_region',
1718
+ 'three_prime_flanking_region',
1719
+ 'three_prime_intron',
1720
+ 'three_prime_noncoding_exon',
1721
+ 'three_prime_overlapping_ncrna',
1722
+ 'three_prime_recoding_site',
1723
+ 'three_prime_repeat_recoding_signal',
1724
+ 'three_prime_restriction_enzyme_junction',
1725
+ 'three_prime_stem_loop_structure',
1726
+ 'three_prime_sticky_end_restriction_enzyme_cleavage_site',
1727
+ 'three_prime_terminal_inverted_repeat',
1728
+ 'three_ten_helix',
1729
+ 'three_three_amino_three_carboxypropyl_uridine',
1730
+ 'three_two_prime_O_dimethyluridine',
1731
+ 'threonine',
1732
+ 'threonine_tRNA_primary_transcript',
1733
+ 'threonyl_tRNA',
1734
+ 'tiling_path',
1735
+ 'tiling_path_clone',
1736
+ 'tiling_path_fragment',
1737
+ 'tmRNA',
1738
+ 'tmRNA_acceptor_piece',
1739
+ 'tmRNA_coding_piece',
1740
+ 'tmRNA_gene',
1741
+ 'tmRNA_primary_transcript',
1742
+ 'tmRNA_region',
1743
+ 'tnaORF',
1744
+ 'topologically_associated_domain',
1745
+ 'topologically_associated_domain_boundary',
1746
+ 'topologically_defined_region',
1747
+ 'trans_splice_acceptor_site',
1748
+ 'trans_splice_donor_site',
1749
+ 'trans_splice_junction',
1750
+ 'trans_splice_site',
1751
+ 'trans_spliced_mRNA',
1752
+ 'trans_spliced_transcript',
1753
+ 'transcribed_cluster',
1754
+ 'transcribed_fragment',
1755
+ 'transcribed_processed_pseudogene',
1756
+ 'transcribed_spacer_region',
1757
+ 'transcribed_unitary_pseudogene',
1758
+ 'transcribed_unprocessed_pseudogene',
1759
+ 'transcript',
1760
+ 'transcript_bound_by_nucleic_acid',
1761
+ 'transcript_bound_by_protein',
1762
+ 'transcript_region',
1763
+ 'transcript_with_translational_frameshift',
1764
+ 'transcription_end_site',
1765
+ 'transcription_factor_regulatory_site',
1766
+ 'transcription_pause_site',
1767
+ 'transcription_start_cluster',
1768
+ 'transcription_termination_signal',
1769
+ 'transcription_unit',
1770
+ 'transcriptional_cis_regulatory_region',
1771
+ 'transgene',
1772
+ 'transgenic_insertion',
1773
+ 'transgenic_transposable_element',
1774
+ 'transit_peptide',
1775
+ 'transit_peptide_region_of_CDS',
1776
+ 'transition',
1777
+ 'translated_nucleotide_match',
1778
+ 'translated_processed_pseudogene',
1779
+ 'translated_unprocessed_pseudogene',
1780
+ 'translation_regulatory_region',
1781
+ 'translational_frameshift',
1782
+ 'translationally_regulated_gene',
1783
+ 'translocation',
1784
+ 'translocation_breakpoint',
1785
+ 'translocation_element',
1786
+ 'transmembrane_helix',
1787
+ 'transmembrane_polypeptide_region',
1788
+ 'transposable_element',
1789
+ 'transposable_element_CDS',
1790
+ 'transposable_element_flanking_region',
1791
+ 'transposable_element_gene',
1792
+ 'transposable_element_insertion_site',
1793
+ 'transposable_element_pseudogene',
1794
+ 'transposon_fragment',
1795
+ 'transversion',
1796
+ 'trinucleotide_repeat_microsatellite_feature',
1797
+ 'tryptophan',
1798
+ 'tryptophan_tRNA_primary_transcript',
1799
+ 'tryptophanyl_tRNA',
1800
+ 'twintron',
1801
+ 'two_methyladenosine',
1802
+ 'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine',
1803
+ 'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine',
1804
+ 'two_methylthio_N6_isopentenyladenosine',
1805
+ 'two_methylthio_N6_methyladenosine',
1806
+ 'two_methylthio_N6_threonyl_carbamoyladenosine',
1807
+ 'two_prime_O_methyladenosine',
1808
+ 'two_prime_O_methylcytidine',
1809
+ 'two_prime_O_methylguanosine',
1810
+ 'two_prime_O_methylinosine',
1811
+ 'two_prime_O_methylpseudouridine',
1812
+ 'two_prime_O_methyluridine',
1813
+ 'two_prime_O_ribosyladenosine_phosphate',
1814
+ 'two_prime_O_ribosylguanosine_phosphate',
1815
+ 'two_thio_two_prime_O_methyluridine',
1816
+ 'two_thiocytidine',
1817
+ 'two_thiouridine',
1818
+ 'tyrosine',
1819
+ 'tyrosine_tRNA_primary_transcript',
1820
+ 'tyrosyl_tRNA',
1821
+ 'uORF',
1822
+ 'ultracontig',
1823
+ 'unassigned_supercontig',
1824
+ 'unconfirmed_transcript',
1825
+ 'undermodified_hydroxywybutosine',
1826
+ 'unedited_region',
1827
+ 'unigene_cluster',
1828
+ 'unit_of_gene_expression',
1829
+ 'unitary_pseudogene',
1830
+ 'unitary_pseudogenic_rRNA',
1831
+ 'unitary_pseudogenic_tRNA',
1832
+ 'unprocessed_pseudogenic_rRNA',
1833
+ 'unprocessed_pseudogenic_tRNA',
1834
+ 'unspecified_indel',
1835
+ 'untranslated_region_polycistronic_mRNA',
1836
+ 'upstream_AUG_codon',
1837
+ 'uridine_five_oxyacetic_acid',
1838
+ 'uridine_five_oxyacetic_acid_methyl_ester',
1839
+ 'vacuolar_sorting_signal',
1840
+ 'validated_cDNA_clone',
1841
+ 'valine',
1842
+ 'valine_tRNA_primary_transcript',
1843
+ 'valyl_tRNA',
1844
+ 'vaultRNA_primary_transcript',
1845
+ 'vault_RNA',
1846
+ 'vault_RNA_gene',
1847
+ 'vector_replicon',
1848
+ 'vertebrate_immune_system_gene',
1849
+ 'vertebrate_immune_system_gene_recombination_feature',
1850
+ 'vertebrate_immune_system_gene_recombination_signal_feature',
1851
+ 'vertebrate_immune_system_gene_recombination_spacer',
1852
+ 'vertebrate_immune_system_pseudogene',
1853
+ 'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster',
1854
+ 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster',
1855
+ 'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment',
1856
+ 'vertebrate_immunoglobulin_T_cell_receptor_segment',
1857
+ 'viral_promoter',
1858
+ 'viral_sequence',
1859
+ 'virtual_sequence',
1860
+ 'wild_type_rescue_gene',
1861
+ 'wobble_base_pair',
1862
+ 'wybutosine',
1863
+ 'wyosine',
1864
+ 'zinc_finger_binding_site',
1865
+ 'zinc_repressed_element',
1866
+ ];
1867
+ exports.default = soSequenceTypes;
1868
+ //# sourceMappingURL=soSequenceTypes.js.map