@apollo-annotation/shared 0.1.19 → 0.1.21
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.d.ts +33 -0
- package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.js +86 -0
- package/dist/Changes/AddAssemblyAndFeaturesFromFileChange.js.map +1 -0
- package/dist/Changes/AddAssemblyFromExternalChange.d.ts +34 -0
- package/dist/Changes/AddAssemblyFromExternalChange.js +100 -0
- package/dist/Changes/AddAssemblyFromExternalChange.js.map +1 -0
- package/dist/Changes/AddAssemblyFromFileChange.d.ts +43 -0
- package/dist/Changes/AddAssemblyFromFileChange.js +146 -0
- package/dist/Changes/AddAssemblyFromFileChange.js.map +1 -0
- package/dist/Changes/AddFeatureChange.d.ts +35 -0
- package/dist/Changes/AddFeatureChange.js +169 -0
- package/dist/Changes/AddFeatureChange.js.map +1 -0
- package/dist/Changes/AddFeaturesFromFileChange.d.ts +32 -0
- package/dist/Changes/AddFeaturesFromFileChange.js +76 -0
- package/dist/Changes/AddFeaturesFromFileChange.js.map +1 -0
- package/dist/Changes/AddRefSeqAliasesChange.d.ts +20 -0
- package/dist/Changes/AddRefSeqAliasesChange.js +61 -0
- package/dist/Changes/AddRefSeqAliasesChange.js.map +1 -0
- package/dist/Changes/DeleteAssemblyChange.d.ts +18 -0
- package/dist/Changes/DeleteAssemblyChange.js +72 -0
- package/dist/Changes/DeleteAssemblyChange.js.map +1 -0
- package/dist/Changes/DeleteFeatureChange.d.ts +42 -0
- package/dist/Changes/DeleteFeatureChange.js +143 -0
- package/dist/Changes/DeleteFeatureChange.js.map +1 -0
- package/dist/Changes/DeleteUserChange.d.ts +25 -0
- package/dist/Changes/DeleteUserChange.js +53 -0
- package/dist/Changes/DeleteUserChange.js.map +1 -0
- package/dist/Changes/FeatureAttributeChange.d.ts +31 -0
- package/dist/Changes/FeatureAttributeChange.js +112 -0
- package/dist/Changes/FeatureAttributeChange.js.map +1 -0
- package/dist/Changes/FromFileBaseChange.d.ts +9 -0
- package/dist/Changes/FromFileBaseChange.js +187 -0
- package/dist/Changes/FromFileBaseChange.js.map +1 -0
- package/dist/Changes/ImportJBrowseConfigChange.d.ts +43 -0
- package/dist/Changes/ImportJBrowseConfigChange.js +67 -0
- package/dist/Changes/ImportJBrowseConfigChange.js.map +1 -0
- package/dist/Changes/LocationEndChange.d.ts +32 -0
- package/dist/Changes/LocationEndChange.js +129 -0
- package/dist/Changes/LocationEndChange.js.map +1 -0
- package/dist/Changes/LocationStartChange.d.ts +32 -0
- package/dist/Changes/LocationStartChange.js +129 -0
- package/dist/Changes/LocationStartChange.js.map +1 -0
- package/dist/Changes/StrandChange.d.ts +31 -0
- package/dist/Changes/StrandChange.js +114 -0
- package/dist/Changes/StrandChange.js.map +1 -0
- package/dist/Changes/TypeChange.d.ts +31 -0
- package/dist/Changes/TypeChange.js +114 -0
- package/dist/Changes/TypeChange.js.map +1 -0
- package/dist/Changes/UserChange.d.ts +25 -0
- package/dist/Changes/UserChange.js +51 -0
- package/dist/Changes/UserChange.js.map +1 -0
- package/dist/Changes/index.d.ts +50 -0
- package/dist/Changes/index.js +55 -0
- package/dist/Changes/index.js.map +1 -0
- package/dist/Checks/CDSCheck.d.ts +8 -0
- package/dist/Checks/CDSCheck.js +197 -0
- package/dist/Checks/CDSCheck.js.map +1 -0
- package/dist/Checks/index.d.ts +1 -0
- package/dist/Checks/index.js +5 -0
- package/dist/Checks/index.js.map +1 -0
- package/dist/Common/index.d.ts +1 -0
- package/dist/Common/index.js +5 -0
- package/dist/Common/index.js.map +1 -0
- package/dist/Common/jwtPayload.d.ts +12 -0
- package/dist/Common/jwtPayload.js +16 -0
- package/dist/Common/jwtPayload.js.map +1 -0
- package/dist/GFF3/gff3ToAnnotationFeature.d.ts +3 -0
- package/dist/GFF3/gff3ToAnnotationFeature.js +211 -0
- package/dist/GFF3/gff3ToAnnotationFeature.js.map +1 -0
- package/dist/GFF3/gff3ToAnnotationFeature.test.d.ts +1 -0
- package/dist/GFF3/gff3ToAnnotationFeature.test.js +174 -0
- package/dist/GFF3/gff3ToAnnotationFeature.test.js.map +1 -0
- package/dist/GFF3/gffReservedKeys.d.ts +5 -0
- package/dist/GFF3/gffReservedKeys.js +34 -0
- package/dist/GFF3/gffReservedKeys.js.map +1 -0
- package/dist/GFF3/index.d.ts +2 -0
- package/dist/GFF3/index.js +6 -0
- package/dist/GFF3/index.js.map +1 -0
- package/dist/Messages.d.ts +28 -0
- package/dist/Messages.js +3 -0
- package/dist/Messages.js.map +1 -0
- package/dist/Operations/GetAssembliesOperation.d.ts +13 -0
- package/dist/Operations/GetAssembliesOperation.js +20 -0
- package/dist/Operations/GetAssembliesOperation.js.map +1 -0
- package/dist/Operations/GetFeaturesOperation.d.ts +26 -0
- package/dist/Operations/GetFeaturesOperation.js +42 -0
- package/dist/Operations/GetFeaturesOperation.js.map +1 -0
- package/dist/Operations/index.d.ts +8 -0
- package/dist/Operations/index.js +10 -0
- package/dist/Operations/index.js.map +1 -0
- package/dist/Validations/CoreValidation.d.ts +17 -0
- package/dist/Validations/CoreValidation.js +36 -0
- package/dist/Validations/CoreValidation.js.map +1 -0
- package/dist/Validations/ParentChildValidation.d.ts +17 -0
- package/dist/Validations/ParentChildValidation.js +61 -0
- package/dist/Validations/ParentChildValidation.js.map +1 -0
- package/dist/Validations/Validation.d.ts +27 -0
- package/dist/Validations/Validation.js +27 -0
- package/dist/Validations/Validation.js.map +1 -0
- package/dist/Validations/ValidationSet.d.ts +24 -0
- package/dist/Validations/ValidationSet.js +86 -0
- package/dist/Validations/ValidationSet.js.map +1 -0
- package/dist/Validations/index.d.ts +4 -0
- package/dist/Validations/index.js +8 -0
- package/dist/Validations/index.js.map +1 -0
- package/dist/Validations/soSequenceTypes.d.ts +2 -0
- package/dist/Validations/soSequenceTypes.js +1868 -0
- package/dist/Validations/soSequenceTypes.js.map +1 -0
- package/dist/index.d.ts +8 -0
- package/dist/index.js +12 -0
- package/dist/index.js.map +1 -0
- package/dist/tsconfig.tsbuildinfo +1 -0
- package/dist/util.d.ts +4 -0
- package/dist/util.js +102 -0
- package/dist/util.js.map +1 -0
- package/package.json +8 -5
- package/src/Changes/AddAssemblyAndFeaturesFromFileChange.ts +10 -6
- package/src/Changes/AddAssemblyFromExternalChange.ts +4 -1
- package/src/Changes/AddAssemblyFromFileChange.ts +138 -41
- package/src/Changes/ImportJBrowseConfigChange.ts +2 -1
- package/src/Checks/CDSCheck.ts +202 -252
- package/src/GFF3/gff3ToAnnotationFeature.test.ts +165 -5
- package/src/GFF3/gff3ToAnnotationFeature.ts +16 -16
- package/src/util.ts +1 -0
- package/test_data/braker.gff +13 -0
- package/test_data/example01.gff3 +26 -0
- package/test_data/example01.json +236 -0
- package/test_data/example02.json +225 -0
- package/test_data/example04.json +225 -0
- package/test_data/example05.gff3 +30 -0
- package/test_data/example06.gff3 +30 -0
- package/test_data/example07.gff3 +30 -0
- package/test_data/gene_mrna.gff3 +4 -0
- package/test_data/gene_representations.gff3 +1781 -0
- package/test_data/one_cds.gff3 +9 -0
- package/test_data/one_cds.json +67 -0
- package/test_data/two_cds.gff3 +9 -0
- package/test_data/two_cds.json +67 -0
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"use strict";
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Object.defineProperty(exports, "__esModule", { value: true });
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const soSequenceTypes = [
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'2A_self_cleaving_peptide_region',
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'4_methylcytosine',
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'5S_SINE_retrotransposon',
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'5_carboxylcytosine',
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'5_formylcytosine',
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'5_hydroxymethylcytosine',
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'5_methylcytosine',
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'7SL_SINE_retrotransposon',
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'8_oxoadenine',
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'8_oxoguanine',
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'AACCCT_box',
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'AFLP_fragment',
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'AP_1_binding_site',
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'ARIA',
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'ARRET',
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'ARS',
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'ARS_consensus_sequence',
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'ASPE_primer',
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'AUG_initiated_uORF',
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'AU_rich_element',
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'A_box',
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'A_box_type_1',
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'A_box_type_2',
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'A_minor_RNA_motif',
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'A_to_C_transversion',
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'A_to_G_transition',
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'A_to_T_transversion',
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'Ace2_UAS',
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'Alu_deletion',
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'Alu_insertion',
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'BAC',
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'BAC_cloned_genomic_insert',
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'BAC_end',
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'BAC_read_contig',
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'BREd_motif',
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'BREu_motif',
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'B_box',
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'Bel_Pao_LTR_retrotransposon',
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'Bruno_response_element',
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'C-D_H_ACA_box_scaRNA',
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'C-D_H_ACA_box_scaRNA_gene',
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'CAAT_signal',
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'CAAX_box',
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'CACTA_TIR_transposon',
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'CAGE_cluster',
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'CAGE_tag',
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'CArG_box',
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'CCAAT_motif',
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'CCA_tail',
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'CDRE_motif',
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'CDS',
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'CDS_extension',
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'CDS_five_prime_extension',
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'CDS_fragment',
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'CDS_independently_known',
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'CDS_predicted',
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'CDS_region',
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'CDS_supported_by_EST_or_cDNA_data',
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'CDS_supported_by_domain_match_data',
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'CDS_supported_by_peptide_spectrum_match',
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'CDS_supported_by_sequence_similarity_data',
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'CDS_three_prime_extension',
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'CRE',
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'CRISPR',
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'CSL_response_element',
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'CTCF_binding_site',
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'CTG_start_codon',
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'C_D_box_scaRNA',
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'C_D_box_scaRNA_gene',
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'C_D_box_snoRNA',
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'C_D_box_snoRNA_gene',
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'C_D_box_snoRNA_primary_transcript',
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'C_box',
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'C_cluster',
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'C_gene_segment',
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'C_region',
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'C_to_A_transversion',
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'C_to_G_transversion',
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'C_to_T_transition',
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'C_to_T_transition_at_pCpG_site',
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'ChIP_seq_region',
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'Copia_LTR_retrotransposon',
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'CpG_island',
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'Crick_strand',
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'Crypton_YR_transposon',
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'CsrB_RsmB_RNA',
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'CuRE',
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'DArT_marker',
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'DCE',
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'DCE_SI',
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'DCE_SII',
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'DCE_SIII',
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'DDB_box',
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'DHU_loop',
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'DIRS_YR_retrotransposon',
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'DJ_C_cluster',
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'DJ_J_C_cluster',
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'DJ_J_cluster',
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'DJ_gene_segment',
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'DMv1_motif',
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'DMv2_motif',
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'DMv3_motif',
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'DMv4_motif',
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'DMv5_motif',
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'DNA_aptamer',
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'DNA_binding_site',
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'DNA_chromosome',
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'DNA_constraint_sequence',
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'DNA_loop',
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'DNA_loop_anchor',
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'DNA_motif',
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'DNA_sequence_secondary_structure',
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'DNA_transposon',
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'DNAzyme',
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'DNaseI_hypersensitive_site',
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'DPE1_motif',
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'DPE_motif',
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'DRE',
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'DRE_motif',
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'DSR_motif',
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'D_DJ_C_cluster',
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'D_DJ_J_C_cluster',
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'D_DJ_J_cluster',
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'D_DJ_cluster',
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'D_J_C_cluster',
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'D_J_cluster',
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'D_cluster',
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'D_gene_recombination_feature',
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'D_gene_segment',
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'D_loop',
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'DsrA_RNA',
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'ER_retention_signal',
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'EST',
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'EST_match',
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'E_box_motif',
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'Endogenous_Retrovirus_LTR_retrotransposon',
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'FLEX_element',
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'FRE',
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'FRT_site',
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'GAGA_motif',
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'GATA_box',
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'GC_rich_promoter_region',
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'GNA_oligo',
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'GTT_trinucleotide_repeat',
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'GT_dinucleotide_repeat',
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'G_box',
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'G_quartet',
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'G_to_A_transition',
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'G_to_C_transversion',
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'G_to_T_transversion',
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'GcvB_RNA',
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'Gypsy_LTR_retrotransposon',
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'H2AK5_acetylation_site',
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'H2AK9_acetylation_site',
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'H2AZK11_acetylation_site',
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'H2AZK13_acetylation_site',
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'H2AZK15_acetylation_site',
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'H2AZK4_acetylation_site',
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'H2AZK7_acetylation_site',
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'H2BK120_acetylation_site',
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'H2BK12_acetylation_site',
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'H2BK15_acetylation_site',
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'H2BK20_acetylation_site',
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'H2BK5_acetylation_site',
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'H2BK5_monomethylation_site',
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'H2B_ubiquitination_site',
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'H3K14_acetylation_site',
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'H3K18_acetylation_site',
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'H3K20_trimethylation_site',
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'H3K23_acetylation_site',
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'H3K23_dimethylation_site',
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'H3K27_acetylation_site',
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'H3K27_dimethylation_site',
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'H3K27_methylation_site',
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'H3K27_monomethylation_site',
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'H3K27_trimethylation_site',
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'H3K36_acetylation_site',
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'H3K36_dimethylation_site',
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'H3K36_methylation_site',
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'H3K36_monomethylation_site',
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'H3K36_trimethylation_site',
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'H3K4_acetylation_site',
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'H3K4_dimethylation_site',
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'H3K4_methylation_site',
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'H3K4_monomethylation_site',
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'H3K4_trimethylation',
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'H3K56_acetylation_site',
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'H3K79_dimethylation_site',
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'H3K79_methylation_site',
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'H3K79_monomethylation_site',
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'H3K79_trimethylation_site',
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'H3K9_acetylation_site',
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'H3K9_dimethylation_site',
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'H3K9_methylation_site',
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'H3K9_monomethylation_site',
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'H3K9_trimethylation_site',
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'H3R2_dimethylation_site',
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'H3R2_monomethylation_site',
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'H4K12_acetylation_site',
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'H4K16_acetylation_site',
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'H4K20_monomethylation_site',
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'H4K4_trimethylation_site',
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'H4K5_acetylation_site',
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|
+
'H4K8_acetylation_site',
|
|
208
|
+
'H4K91_acetylation_site',
|
|
209
|
+
'H4K_acylation_region',
|
|
210
|
+
'H4R3_dimethylation_site',
|
|
211
|
+
'HERV_deletion',
|
|
212
|
+
'HERV_insertion',
|
|
213
|
+
'HSE',
|
|
214
|
+
'H_ACA_box_scaRNA',
|
|
215
|
+
'H_ACA_box_scaRNA_gene',
|
|
216
|
+
'H_ACA_box_snoRNA',
|
|
217
|
+
'H_ACA_box_snoRNA_gene',
|
|
218
|
+
'H_ACA_box_snoRNA_primary_transcript',
|
|
219
|
+
'H_pseudoknot',
|
|
220
|
+
'Hoogsteen_base_pair',
|
|
221
|
+
'I-box',
|
|
222
|
+
'IG_C_gene',
|
|
223
|
+
'IG_C_pseudogene',
|
|
224
|
+
'IG_D_gene',
|
|
225
|
+
'IG_J_gene',
|
|
226
|
+
'IG_J_pseudogene',
|
|
227
|
+
'IG_V_gene',
|
|
228
|
+
'IG_V_pseudogene',
|
|
229
|
+
'INR1_motif',
|
|
230
|
+
'INR_motif',
|
|
231
|
+
'IRLinv_site',
|
|
232
|
+
'IRRinv_site',
|
|
233
|
+
'ISRE',
|
|
234
|
+
'I_LINE_retrotransposon',
|
|
235
|
+
'J_C_cluster',
|
|
236
|
+
'J_cluster',
|
|
237
|
+
'J_gene_recombination_feature',
|
|
238
|
+
'J_gene_segment',
|
|
239
|
+
'J_heptamer',
|
|
240
|
+
'J_nonamer',
|
|
241
|
+
'J_spacer',
|
|
242
|
+
'Jockey_LINE_retrotransposon',
|
|
243
|
+
'KEN_box',
|
|
244
|
+
'K_turn_RNA_motif',
|
|
245
|
+
'L1_LINE_retrotransposon',
|
|
246
|
+
'LARD',
|
|
247
|
+
'LINE1_deletion',
|
|
248
|
+
'LINE1_insertion',
|
|
249
|
+
'LINE_element',
|
|
250
|
+
'LNA_oligo',
|
|
251
|
+
'LOZ1_response_element',
|
|
252
|
+
'LTR_component',
|
|
253
|
+
'LTR_retrotransposon',
|
|
254
|
+
'L_box',
|
|
255
|
+
'MCB',
|
|
256
|
+
'MITE',
|
|
257
|
+
'MNP',
|
|
258
|
+
'MNV',
|
|
259
|
+
'MNV_artifact',
|
|
260
|
+
'MTE',
|
|
261
|
+
'Mat2P',
|
|
262
|
+
'Mat3M',
|
|
263
|
+
'Merlin_TIR_transposon',
|
|
264
|
+
'MicF_RNA',
|
|
265
|
+
'Mutator_TIR_transposon',
|
|
266
|
+
'N2_2_prime_O_dimethylguanosine',
|
|
267
|
+
'N2_7_2prirme_O_trimethylguanosine',
|
|
268
|
+
'N2_7_dimethylguanosine',
|
|
269
|
+
'N2_N2_2_prime_O_trimethylguanosine',
|
|
270
|
+
'N2_N2_7_trimethylguanosine',
|
|
271
|
+
'N2_N2_dimethylguanosine',
|
|
272
|
+
'N2_methylguanosine',
|
|
273
|
+
'N4_2_prime_O_dimethylcytidine',
|
|
274
|
+
'N4_N4_2_prime_O_trimethylcytidine',
|
|
275
|
+
'N4_acetyl_2_prime_O_methylcytidine',
|
|
276
|
+
'N4_acetylcytidine',
|
|
277
|
+
'N4_methylcytidine',
|
|
278
|
+
'N6_2_prime_O_dimethyladenosine',
|
|
279
|
+
'N6_N6_2_prime_O_trimethyladenosine',
|
|
280
|
+
'N6_N6_dimethyladenosine',
|
|
281
|
+
'N6_acetyladenosine',
|
|
282
|
+
'N6_cis_hydroxyisopentenyl_adenosine',
|
|
283
|
+
'N6_glycinylcarbamoyladenosine',
|
|
284
|
+
'N6_hydroxynorvalylcarbamoyladenosine',
|
|
285
|
+
'N6_isopentenyladenosine',
|
|
286
|
+
'N6_methyl_N6_threonylcarbamoyladenosine',
|
|
287
|
+
'N6_methyladenine',
|
|
288
|
+
'N6_methyladenosine',
|
|
289
|
+
'N6_threonylcarbamoyladenosine',
|
|
290
|
+
'NDM2_motif',
|
|
291
|
+
'NDM3_motif',
|
|
292
|
+
'NMD_polymorphic_pseudogene_transcript',
|
|
293
|
+
'NMD_transcript',
|
|
294
|
+
'NSD_transcript',
|
|
295
|
+
'N_region',
|
|
296
|
+
'Ngaro_YR_retrotransposon',
|
|
297
|
+
'ORF',
|
|
298
|
+
'Okazaki_fragment',
|
|
299
|
+
'OxyS_RNA',
|
|
300
|
+
'PAC',
|
|
301
|
+
'PAC_end',
|
|
302
|
+
'PCB',
|
|
303
|
+
'PCR_product',
|
|
304
|
+
'PIF_Harbinger_TIR_transposon',
|
|
305
|
+
'PIP_box',
|
|
306
|
+
'PNA_oligo',
|
|
307
|
+
'PSE_motif',
|
|
308
|
+
'P_TIR_transposon',
|
|
309
|
+
'Penelope_retrotransposon',
|
|
310
|
+
'Phage_RNA_Polymerase_Promoter',
|
|
311
|
+
'Pho7_binding_site',
|
|
312
|
+
'QTL',
|
|
313
|
+
'R2_LINE_retrotransposon',
|
|
314
|
+
'RAPD',
|
|
315
|
+
'RFLP_fragment',
|
|
316
|
+
'RH_map',
|
|
317
|
+
'RNA_6S',
|
|
318
|
+
'RNA_7SK',
|
|
319
|
+
'RNA_7SK_gene',
|
|
320
|
+
'RNA_aptamer',
|
|
321
|
+
'RNA_chromosome',
|
|
322
|
+
'RNA_hook_turn',
|
|
323
|
+
'RNA_internal_loop',
|
|
324
|
+
'RNA_junction_loop',
|
|
325
|
+
'RNA_motif',
|
|
326
|
+
'RNA_polymerase_III_TATA_box',
|
|
327
|
+
'RNA_polymerase_II_TATA_box',
|
|
328
|
+
'RNA_sequence_secondary_structure',
|
|
329
|
+
'RNA_stability_element',
|
|
330
|
+
'RNA_thermometer',
|
|
331
|
+
'RNAi_reagent',
|
|
332
|
+
'RNApol_III_promoter',
|
|
333
|
+
'RNApol_III_promoter_type_1',
|
|
334
|
+
'RNApol_III_promoter_type_2',
|
|
335
|
+
'RNApol_III_promoter_type_3',
|
|
336
|
+
'RNApol_II_core_promoter',
|
|
337
|
+
'RNApol_II_promoter',
|
|
338
|
+
'RNApol_I_promoter',
|
|
339
|
+
'RNase_MRP_RNA',
|
|
340
|
+
'RNase_MRP_RNA_gene',
|
|
341
|
+
'RNase_P_RNA',
|
|
342
|
+
'RNase_P_RNA_gene',
|
|
343
|
+
'RRE_RNA',
|
|
344
|
+
'RR_tract',
|
|
345
|
+
'RST',
|
|
346
|
+
'RST_match',
|
|
347
|
+
'RTE_LINE_retrotransposon',
|
|
348
|
+
'R_GNA_oligo',
|
|
349
|
+
'R_LTR_region',
|
|
350
|
+
'R_five_prime_LTR_region',
|
|
351
|
+
'R_three_prime_LTR_region',
|
|
352
|
+
'Retrovirus_LTR_retrotransposon',
|
|
353
|
+
'Robertsonian_fusion',
|
|
354
|
+
'RprA_RNA',
|
|
355
|
+
'SAGE_tag',
|
|
356
|
+
'SECIS_element',
|
|
357
|
+
'SHP_box',
|
|
358
|
+
'SINE_element',
|
|
359
|
+
'SL10_acceptor_site',
|
|
360
|
+
'SL11_acceptor_site',
|
|
361
|
+
'SL12_acceptor_site',
|
|
362
|
+
'SL1_acceptor_site',
|
|
363
|
+
'SL2_acceptor_site',
|
|
364
|
+
'SL3_acceptor_site',
|
|
365
|
+
'SL4_acceptor_site',
|
|
366
|
+
'SL5_acceptor_site',
|
|
367
|
+
'SL6_acceptor_site',
|
|
368
|
+
'SL7_acceptor_site',
|
|
369
|
+
'SL8_acceptor_site',
|
|
370
|
+
'SL9_acceptor_site',
|
|
371
|
+
'SNP',
|
|
372
|
+
'SNV',
|
|
373
|
+
'SNV_artifact',
|
|
374
|
+
'SP6_RNA_Polymerase_Promoter',
|
|
375
|
+
'SRP_RNA',
|
|
376
|
+
'SRP_RNA_gene',
|
|
377
|
+
'SRP_RNA_primary_transcript',
|
|
378
|
+
'STREP_motif',
|
|
379
|
+
'STS',
|
|
380
|
+
'STS_map',
|
|
381
|
+
'SUMO_interaction_motif',
|
|
382
|
+
'SVA_deletion',
|
|
383
|
+
'SVA_insertion',
|
|
384
|
+
'S_GNA_oligo',
|
|
385
|
+
'S_region',
|
|
386
|
+
'Sap1_recognition_motif',
|
|
387
|
+
'Shine_Dalgarno_sequence',
|
|
388
|
+
'T3_RNA_Polymerase_Promoter',
|
|
389
|
+
'T7_RNA_Polymerase_Promoter',
|
|
390
|
+
'TATA_box',
|
|
391
|
+
'TCS_element',
|
|
392
|
+
'TCT_motif',
|
|
393
|
+
'TERRA',
|
|
394
|
+
'TFRS_collection',
|
|
395
|
+
'TFRS_module',
|
|
396
|
+
'TF_binding_site',
|
|
397
|
+
'TNA_oligo',
|
|
398
|
+
'TRIM',
|
|
399
|
+
'TR_C_Gene',
|
|
400
|
+
'TR_D_Gene',
|
|
401
|
+
'TR_J_Gene',
|
|
402
|
+
'TR_J_pseudogene',
|
|
403
|
+
'TR_V_Gene',
|
|
404
|
+
'TR_V_pseudogene',
|
|
405
|
+
'TR_box',
|
|
406
|
+
'TSS',
|
|
407
|
+
'T_cell_receptor_gene',
|
|
408
|
+
'T_cell_receptor_pseudogene',
|
|
409
|
+
'T_loop',
|
|
410
|
+
'T_to_A_transversion',
|
|
411
|
+
'T_to_C_transition',
|
|
412
|
+
'T_to_G_transversion',
|
|
413
|
+
'Tc1_Mariner_TIR_transposon',
|
|
414
|
+
'Transib_TIR_transposon',
|
|
415
|
+
'U11_snRNA',
|
|
416
|
+
'U12_intron',
|
|
417
|
+
'U12_snRNA',
|
|
418
|
+
'U14_snoRNA',
|
|
419
|
+
'U14_snoRNA_gene',
|
|
420
|
+
'U14_snoRNA_primary_transcript',
|
|
421
|
+
'U1_snRNA',
|
|
422
|
+
'U2_intron',
|
|
423
|
+
'U2_snRNA',
|
|
424
|
+
'U3_LTR_region',
|
|
425
|
+
'U3_five_prime_LTR_region',
|
|
426
|
+
'U3_snoRNA',
|
|
427
|
+
'U3_snoRNA_gene',
|
|
428
|
+
'U3_three_prime_LTR_region',
|
|
429
|
+
'U4_snRNA',
|
|
430
|
+
'U4atac_snRNA',
|
|
431
|
+
'U5_LTR_region',
|
|
432
|
+
'U5_five_prime_LTR_region',
|
|
433
|
+
'U5_snRNA',
|
|
434
|
+
'U5_three_prime_LTR_region',
|
|
435
|
+
'U6_snRNA',
|
|
436
|
+
'U6atac_snRNA',
|
|
437
|
+
'U7_snRNA',
|
|
438
|
+
'UAA_stop_codon_signal',
|
|
439
|
+
'UAG_stop_codon_signal',
|
|
440
|
+
'UGA_stop_codon_signal',
|
|
441
|
+
'UNAAAC_motif',
|
|
442
|
+
'UPD',
|
|
443
|
+
'UST',
|
|
444
|
+
'UST_match',
|
|
445
|
+
'UTR',
|
|
446
|
+
'UTR_intron',
|
|
447
|
+
'UTR_region',
|
|
448
|
+
'U_box',
|
|
449
|
+
'VDJ_C_cluster',
|
|
450
|
+
'VDJ_J_C_cluster',
|
|
451
|
+
'VDJ_J_cluster',
|
|
452
|
+
'VDJ_gene_segment',
|
|
453
|
+
'VD_gene_segment',
|
|
454
|
+
'VJ_C_cluster',
|
|
455
|
+
'VJ_J_C_cluster',
|
|
456
|
+
'VJ_J_cluster',
|
|
457
|
+
'VJ_gene_segment',
|
|
458
|
+
'V_DJ_C_cluster',
|
|
459
|
+
'V_DJ_J_C_cluster',
|
|
460
|
+
'V_DJ_J_cluster',
|
|
461
|
+
'V_DJ_cluster',
|
|
462
|
+
'V_D_DJ_C_cluster',
|
|
463
|
+
'V_D_DJ_J_C_cluster',
|
|
464
|
+
'V_D_DJ_J_cluster',
|
|
465
|
+
'V_D_DJ_cluster',
|
|
466
|
+
'V_D_J_C_cluster',
|
|
467
|
+
'V_D_J_cluster',
|
|
468
|
+
'V_J_C_cluster',
|
|
469
|
+
'V_J_cluster',
|
|
470
|
+
'V_VDJ_C_cluster',
|
|
471
|
+
'V_VDJ_J_C_cluster',
|
|
472
|
+
'V_VDJ_J_cluster',
|
|
473
|
+
'V_VDJ_cluster',
|
|
474
|
+
'V_VJ_C_cluster',
|
|
475
|
+
'V_VJ_J_C_cluster',
|
|
476
|
+
'V_VJ_J_cluster',
|
|
477
|
+
'V_VJ_cluster',
|
|
478
|
+
'V_cluster',
|
|
479
|
+
'V_gene_recombination_feature',
|
|
480
|
+
'V_gene_segment',
|
|
481
|
+
'V_heptamer',
|
|
482
|
+
'V_nonamer',
|
|
483
|
+
'V_region',
|
|
484
|
+
'V_spacer',
|
|
485
|
+
'Viper_YR_retrotransposon',
|
|
486
|
+
'WC_base_pair',
|
|
487
|
+
'W_region',
|
|
488
|
+
'Watson_strand',
|
|
489
|
+
'X_element',
|
|
490
|
+
'X_element_combinatorial_repeat',
|
|
491
|
+
'X_region',
|
|
492
|
+
'YAC',
|
|
493
|
+
'YAC_end',
|
|
494
|
+
'YR_retrotransposon',
|
|
495
|
+
'Y_RNA',
|
|
496
|
+
'Y_RNA_gene',
|
|
497
|
+
'Y_RNA_primary_transcript',
|
|
498
|
+
'Y_prime_element',
|
|
499
|
+
'Y_region',
|
|
500
|
+
'Z1_region',
|
|
501
|
+
'Z2_region',
|
|
502
|
+
'Zas1_recognition_motif',
|
|
503
|
+
'aberrant_processed_transcript',
|
|
504
|
+
'accessible_DNA_region',
|
|
505
|
+
'active_peptide',
|
|
506
|
+
'adaptive_island',
|
|
507
|
+
'alanine',
|
|
508
|
+
'alanine_tRNA_primary_transcript',
|
|
509
|
+
'alanyl_tRNA',
|
|
510
|
+
'allelic_pseudogene',
|
|
511
|
+
'allelic_pseudogenic_rRNA',
|
|
512
|
+
'allelic_pseudogenic_tRNA',
|
|
513
|
+
'allelically_excluded_gene',
|
|
514
|
+
'alpha_beta_motif',
|
|
515
|
+
'alpha_helix',
|
|
516
|
+
'alternate_sequence_site',
|
|
517
|
+
'alternatively_spliced_transcript',
|
|
518
|
+
'amber_stop_codon',
|
|
519
|
+
'ambisense_ssRNA_viral_sequence',
|
|
520
|
+
'amino_acid',
|
|
521
|
+
'amplification_origin',
|
|
522
|
+
'anchor_binding_site',
|
|
523
|
+
'anchor_region',
|
|
524
|
+
'androgen_response_element',
|
|
525
|
+
'anti_ARRET',
|
|
526
|
+
'anticodon',
|
|
527
|
+
'anticodon_loop',
|
|
528
|
+
'antiparallel_beta_strand',
|
|
529
|
+
'antisense_RNA',
|
|
530
|
+
'antisense_lncRNA',
|
|
531
|
+
'antisense_lncRNA_gene',
|
|
532
|
+
'antisense_primary_transcript',
|
|
533
|
+
'apicoplast_chromosome',
|
|
534
|
+
'apicoplast_gene',
|
|
535
|
+
'aptamer',
|
|
536
|
+
'archaeal_intron',
|
|
537
|
+
'archaeosine',
|
|
538
|
+
'arginine',
|
|
539
|
+
'arginine_tRNA_primary_transcript',
|
|
540
|
+
'arginyl_tRNA',
|
|
541
|
+
'asparagine',
|
|
542
|
+
'asparagine_tRNA_primary_transcript',
|
|
543
|
+
'asparaginyl_tRNA',
|
|
544
|
+
'aspartic_acid',
|
|
545
|
+
'aspartic_acid_tRNA_primary_transcript',
|
|
546
|
+
'aspartyl_tRNA',
|
|
547
|
+
'assembly',
|
|
548
|
+
'assembly_component',
|
|
549
|
+
'assembly_error_correction',
|
|
550
|
+
'asx_motif',
|
|
551
|
+
'asx_turn',
|
|
552
|
+
'asx_turn_left_handed_type_one',
|
|
553
|
+
'asx_turn_left_handed_type_two',
|
|
554
|
+
'asx_turn_right_handed_type_one',
|
|
555
|
+
'asx_turn_right_handed_type_two',
|
|
556
|
+
'asymmetric_RNA_internal_loop',
|
|
557
|
+
'attB_site',
|
|
558
|
+
'attC_site',
|
|
559
|
+
'attCtn_site',
|
|
560
|
+
'attI_site',
|
|
561
|
+
'attL_site',
|
|
562
|
+
'attP_site',
|
|
563
|
+
'attR_site',
|
|
564
|
+
'attenuator',
|
|
565
|
+
'autocatalytically_spliced_intron',
|
|
566
|
+
'bacterial_RNApol_promoter',
|
|
567
|
+
'bacterial_RNApol_promoter_sigma54_element',
|
|
568
|
+
'bacterial_RNApol_promoter_sigma_70_element',
|
|
569
|
+
'bacterial_RNApol_promoter_sigma_ecf_element',
|
|
570
|
+
'bacterial_terminator',
|
|
571
|
+
'base',
|
|
572
|
+
'base_call_error_correction',
|
|
573
|
+
'base_pair',
|
|
574
|
+
'beta_bulge',
|
|
575
|
+
'beta_bulge_loop',
|
|
576
|
+
'beta_bulge_loop_five',
|
|
577
|
+
'beta_bulge_loop_six',
|
|
578
|
+
'beta_strand',
|
|
579
|
+
'beta_turn',
|
|
580
|
+
'beta_turn_left_handed_type_one',
|
|
581
|
+
'beta_turn_left_handed_type_two',
|
|
582
|
+
'beta_turn_right_handed_type_one',
|
|
583
|
+
'beta_turn_right_handed_type_two',
|
|
584
|
+
'beta_turn_type_eight',
|
|
585
|
+
'beta_turn_type_six',
|
|
586
|
+
'beta_turn_type_six_a',
|
|
587
|
+
'beta_turn_type_six_a_one',
|
|
588
|
+
'beta_turn_type_six_a_two',
|
|
589
|
+
'beta_turn_type_six_b',
|
|
590
|
+
'bidirectional_promoter',
|
|
591
|
+
'bidirectional_promoter_lncRNA',
|
|
592
|
+
'binding_site',
|
|
593
|
+
'biochemical_region_of_peptide',
|
|
594
|
+
'biological_region',
|
|
595
|
+
'biomaterial_region',
|
|
596
|
+
'biosynthetic_gene_cluster',
|
|
597
|
+
'blocked_reading_frame',
|
|
598
|
+
'blunt_end_restriction_enzyme_cleavage_junction',
|
|
599
|
+
'blunt_end_restriction_enzyme_cleavage_site',
|
|
600
|
+
'boundary_element',
|
|
601
|
+
'branch_site',
|
|
602
|
+
'cDNA_clone',
|
|
603
|
+
'cDNA_match',
|
|
604
|
+
'c_terminal_region',
|
|
605
|
+
'candidate_gene',
|
|
606
|
+
'canonical_five_prime_splice_site',
|
|
607
|
+
'canonical_three_prime_splice_site',
|
|
608
|
+
'cap',
|
|
609
|
+
'capped_mRNA',
|
|
610
|
+
'capped_primary_transcript',
|
|
611
|
+
'cassette_pseudogene',
|
|
612
|
+
'catalytic_residue',
|
|
613
|
+
'catmat_left_handed_four',
|
|
614
|
+
'catmat_left_handed_three',
|
|
615
|
+
'catmat_right_handed_four',
|
|
616
|
+
'catmat_right_handed_three',
|
|
617
|
+
'central_hydrophobic_region_of_signal_peptide',
|
|
618
|
+
'centromere',
|
|
619
|
+
'centromere_DNA_Element_I',
|
|
620
|
+
'centromere_DNA_Element_II',
|
|
621
|
+
'centromere_DNA_Element_III',
|
|
622
|
+
'centromeric_repeat',
|
|
623
|
+
'chimeric_cDNA_clone',
|
|
624
|
+
'chloroplast_DNA_read',
|
|
625
|
+
'chloroplast_chromosome',
|
|
626
|
+
'chromatin_regulatory_region',
|
|
627
|
+
'chromoplast_chromosome',
|
|
628
|
+
'chromoplast_gene',
|
|
629
|
+
'chromosomal_regulatory_element',
|
|
630
|
+
'chromosomal_structural_element',
|
|
631
|
+
'chromosomal_translocation',
|
|
632
|
+
'chromosome',
|
|
633
|
+
'chromosome_arm',
|
|
634
|
+
'chromosome_band',
|
|
635
|
+
'chromosome_breakage_sequence',
|
|
636
|
+
'chromosome_breakpoint',
|
|
637
|
+
'chromosome_part',
|
|
638
|
+
'circular_double_stranded_DNA_chromosome',
|
|
639
|
+
'circular_double_stranded_RNA_chromosome',
|
|
640
|
+
'circular_mRNA',
|
|
641
|
+
'circular_ncRNA',
|
|
642
|
+
'circular_plasmid',
|
|
643
|
+
'circular_single_stranded_DNA_chromosome',
|
|
644
|
+
'circular_single_stranded_RNA_chromosome',
|
|
645
|
+
'cis_acting_homologous_chromosome_pairing_region',
|
|
646
|
+
'cis_regulatory_frameshift_element',
|
|
647
|
+
'cis_regulatory_module',
|
|
648
|
+
'cis_splice_site',
|
|
649
|
+
'class_II_RNA',
|
|
650
|
+
'class_I_RNA',
|
|
651
|
+
'cleaved_for_gpi_anchor_region',
|
|
652
|
+
'cleaved_initiator_methionine',
|
|
653
|
+
'cleaved_peptide_region',
|
|
654
|
+
'clip',
|
|
655
|
+
'clone',
|
|
656
|
+
'clone_end',
|
|
657
|
+
'clone_insert',
|
|
658
|
+
'clone_insert_end',
|
|
659
|
+
'clone_insert_start',
|
|
660
|
+
'cloned_cDNA_insert',
|
|
661
|
+
'cloned_genomic_insert',
|
|
662
|
+
'cloned_region',
|
|
663
|
+
'coding_conserved_region',
|
|
664
|
+
'coding_end',
|
|
665
|
+
'coding_exon',
|
|
666
|
+
'coding_region_of_exon',
|
|
667
|
+
'coding_start',
|
|
668
|
+
'coding_transcript_with_retained_intron',
|
|
669
|
+
'codon',
|
|
670
|
+
'coiled_coil',
|
|
671
|
+
'cointegrated_plasmid',
|
|
672
|
+
'common_fragile_site',
|
|
673
|
+
'complex_chromosomal_rearrangement',
|
|
674
|
+
'complex_operon',
|
|
675
|
+
'complex_regulon',
|
|
676
|
+
'complex_structural_alteration',
|
|
677
|
+
'complex_substitution',
|
|
678
|
+
'compositionally_biased_region_of_peptide',
|
|
679
|
+
'conformational_switch',
|
|
680
|
+
'conjugative_transposon',
|
|
681
|
+
'consensus_AFLP_fragment',
|
|
682
|
+
'consensus_gDNA',
|
|
683
|
+
'consensus_mRNA',
|
|
684
|
+
'consensus_region',
|
|
685
|
+
'conserved_region',
|
|
686
|
+
'constitutive_promoter',
|
|
687
|
+
'contig',
|
|
688
|
+
'contig_collection',
|
|
689
|
+
'contig_read',
|
|
690
|
+
'copy_number_gain',
|
|
691
|
+
'copy_number_loss',
|
|
692
|
+
'copy_number_variation',
|
|
693
|
+
'core_eukaryotic_promoter_element',
|
|
694
|
+
'core_prokaryotic_promoter_element',
|
|
695
|
+
'core_promoter_element',
|
|
696
|
+
'core_viral_promoter_element',
|
|
697
|
+
'cosmid',
|
|
698
|
+
'cross_genome_match',
|
|
699
|
+
'cryptic_gene',
|
|
700
|
+
'cryptic_promoter',
|
|
701
|
+
'cryptic_prophage',
|
|
702
|
+
'cryptic_splice_site',
|
|
703
|
+
'cryptogene',
|
|
704
|
+
'ct_gene',
|
|
705
|
+
'cyanelle_chromosome',
|
|
706
|
+
'cyanelle_gene',
|
|
707
|
+
'cyclic_translocation',
|
|
708
|
+
'cysteine',
|
|
709
|
+
'cysteine_tRNA_primary_transcript',
|
|
710
|
+
'cysteinyl_tRNA',
|
|
711
|
+
'cytoplasmic_polypeptide_region',
|
|
712
|
+
'cytosolic_16S_rRNA',
|
|
713
|
+
'cytosolic_18S_rRNA',
|
|
714
|
+
'cytosolic_23S_rRNA',
|
|
715
|
+
'cytosolic_25S_rRNA',
|
|
716
|
+
'cytosolic_28S_rRNA',
|
|
717
|
+
'cytosolic_2S_rRNA',
|
|
718
|
+
'cytosolic_5S_rRNA',
|
|
719
|
+
'cytosolic_5_8S_rRNA',
|
|
720
|
+
'cytosolic_LSU_rRNA',
|
|
721
|
+
'cytosolic_LSU_rRNA_gene',
|
|
722
|
+
'cytosolic_SSU_rRNA',
|
|
723
|
+
'cytosolic_SSU_rRNA_gene',
|
|
724
|
+
'cytosolic_rRNA',
|
|
725
|
+
'cytosolic_rRNA_16S_gene',
|
|
726
|
+
'cytosolic_rRNA_18S_gene',
|
|
727
|
+
'cytosolic_rRNA_23S_gene',
|
|
728
|
+
'cytosolic_rRNA_25S_gene',
|
|
729
|
+
'cytosolic_rRNA_28S_gene',
|
|
730
|
+
'cytosolic_rRNA_2S_gene',
|
|
731
|
+
'cytosolic_rRNA_5S_gene',
|
|
732
|
+
'cytosolic_rRNA_5_8S_gene',
|
|
733
|
+
'cytosolic_rRNA_gene',
|
|
734
|
+
'dCAPS_primer',
|
|
735
|
+
'databank_entry',
|
|
736
|
+
'decayed_exon',
|
|
737
|
+
'defective_conjugative_transposon',
|
|
738
|
+
'deficient_translocation',
|
|
739
|
+
'deletion',
|
|
740
|
+
'deletion_artifact',
|
|
741
|
+
'deletion_breakpoint',
|
|
742
|
+
'deletion_junction',
|
|
743
|
+
'delins',
|
|
744
|
+
'destruction_box',
|
|
745
|
+
'dg_repeat',
|
|
746
|
+
'dh_repeat',
|
|
747
|
+
'dicistronic_mRNA',
|
|
748
|
+
'dicistronic_primary_transcript',
|
|
749
|
+
'dicistronic_transcript',
|
|
750
|
+
'dif_site',
|
|
751
|
+
'dihydrouridine',
|
|
752
|
+
'dinucleotide_repeat_microsatellite_feature',
|
|
753
|
+
'direct_repeat',
|
|
754
|
+
'direct_tandem_duplication',
|
|
755
|
+
'disabled_reading_frame',
|
|
756
|
+
'dispersed_repeat',
|
|
757
|
+
'distal_duplication',
|
|
758
|
+
'distal_promoter_element',
|
|
759
|
+
'distant_three_prime_recoding_signal',
|
|
760
|
+
'double_stranded_DNA_chromosome',
|
|
761
|
+
'double_stranded_RNA_chromosome',
|
|
762
|
+
'ds_DNA_viral_sequence',
|
|
763
|
+
'ds_RNA_viral_sequence',
|
|
764
|
+
'ds_oligo',
|
|
765
|
+
'duplicated_pseudogene',
|
|
766
|
+
'duplication',
|
|
767
|
+
'duplication_artifact',
|
|
768
|
+
'dye_terminator_read',
|
|
769
|
+
'early_origin_of_replication',
|
|
770
|
+
'edited_CDS',
|
|
771
|
+
'edited_mRNA',
|
|
772
|
+
'edited_transcript',
|
|
773
|
+
'edited_transcript_by_A_to_I_substitution',
|
|
774
|
+
'edited_transcript_feature',
|
|
775
|
+
'editing_block',
|
|
776
|
+
'editing_domain',
|
|
777
|
+
'endogenous_retroviral_gene',
|
|
778
|
+
'endonuclease_spliced_intron',
|
|
779
|
+
'endosomal_localization_signal',
|
|
780
|
+
'engineered_episome',
|
|
781
|
+
'engineered_foreign_gene',
|
|
782
|
+
'engineered_foreign_region',
|
|
783
|
+
'engineered_foreign_repetitive_element',
|
|
784
|
+
'engineered_foreign_transposable_element',
|
|
785
|
+
'engineered_foreign_transposable_element_gene',
|
|
786
|
+
'engineered_fusion_gene',
|
|
787
|
+
'engineered_gene',
|
|
788
|
+
'engineered_insert',
|
|
789
|
+
'engineered_plasmid',
|
|
790
|
+
'engineered_region',
|
|
791
|
+
'engineered_rescue_region',
|
|
792
|
+
'engineered_tag',
|
|
793
|
+
'engineered_transposable_element',
|
|
794
|
+
'enhancer',
|
|
795
|
+
'enhancerRNA',
|
|
796
|
+
'enhancer_binding_site',
|
|
797
|
+
'enhancer_blocking_element',
|
|
798
|
+
'enhancer_bound_by_factor',
|
|
799
|
+
'enhancer_trap_construct',
|
|
800
|
+
'enzymatic_RNA',
|
|
801
|
+
'enzymatic_RNA_gene',
|
|
802
|
+
'epigenetically_modified_gene',
|
|
803
|
+
'epigenetically_modified_region',
|
|
804
|
+
'epigenomically_modified_region',
|
|
805
|
+
'episome',
|
|
806
|
+
'epitope',
|
|
807
|
+
'epoxyqueuosine',
|
|
808
|
+
'eukaryotic_promoter',
|
|
809
|
+
'eukaryotic_terminator',
|
|
810
|
+
'exemplar_mRNA',
|
|
811
|
+
'exon',
|
|
812
|
+
'exon_junction',
|
|
813
|
+
'exon_of_single_exon_gene',
|
|
814
|
+
'exon_region',
|
|
815
|
+
'exonic_splice_enhancer',
|
|
816
|
+
'exonic_splicing_silencer',
|
|
817
|
+
'experimental_feature',
|
|
818
|
+
'experimental_result_region',
|
|
819
|
+
'experimentally_defined_binding_region',
|
|
820
|
+
'expressed_sequence_assembly',
|
|
821
|
+
'expressed_sequence_match',
|
|
822
|
+
'extended_cis_splice_site',
|
|
823
|
+
'extended_intronic_splice_region',
|
|
824
|
+
'external_transcribed_spacer_region',
|
|
825
|
+
'extrachromosomal_mobile_genetic_element',
|
|
826
|
+
'extramembrane_polypeptide_region',
|
|
827
|
+
'fingerprint_map',
|
|
828
|
+
'five_aminomethyl_two_thiouridine',
|
|
829
|
+
'five_carbamoylmethyl_two_prime_O_methyluridine',
|
|
830
|
+
'five_carbamoylmethyluridine',
|
|
831
|
+
'five_carboxyhydroxymethyl_uridine',
|
|
832
|
+
'five_carboxyhydroxymethyl_uridine_methyl_ester',
|
|
833
|
+
'five_carboxymethylaminomethyl_two_prime_O_methyluridine',
|
|
834
|
+
'five_carboxymethylaminomethyl_two_thiouridine',
|
|
835
|
+
'five_carboxymethylaminomethyluridine',
|
|
836
|
+
'five_carboxymethyluridine',
|
|
837
|
+
'five_formyl_two_prime_O_methylcytidine',
|
|
838
|
+
'five_formylcytidine',
|
|
839
|
+
'five_hydroxymethylcytidine',
|
|
840
|
+
'five_hydroxyuridine',
|
|
841
|
+
'five_isopentenylaminomethyl_two_prime_O_methyluridine',
|
|
842
|
+
'five_isopentenylaminomethyl_two_thiouridine',
|
|
843
|
+
'five_isopentenylaminomethyl_uridine',
|
|
844
|
+
'five_methoxycarbonylmethyl_two_prime_O_methyluridine',
|
|
845
|
+
'five_methoxycarbonylmethyl_two_thiouridine',
|
|
846
|
+
'five_methoxycarbonylmethyluridine',
|
|
847
|
+
'five_methoxyuridine',
|
|
848
|
+
'five_methyl_2_thiouridine',
|
|
849
|
+
'five_methylaminomethyl_two_selenouridine',
|
|
850
|
+
'five_methylaminomethyl_two_thiouridine',
|
|
851
|
+
'five_methylaminomethyluridine',
|
|
852
|
+
'five_methylcytidine',
|
|
853
|
+
'five_methyldihydrouridine',
|
|
854
|
+
'five_methyluridine',
|
|
855
|
+
'five_prime_D_heptamer',
|
|
856
|
+
'five_prime_D_nonamer',
|
|
857
|
+
'five_prime_D_recombination_signal_sequence',
|
|
858
|
+
'five_prime_D_spacer',
|
|
859
|
+
'five_prime_EST',
|
|
860
|
+
'five_prime_LTR',
|
|
861
|
+
'five_prime_LTR_component',
|
|
862
|
+
'five_prime_RST',
|
|
863
|
+
'five_prime_UST',
|
|
864
|
+
'five_prime_UTR',
|
|
865
|
+
'five_prime_UTR_intron',
|
|
866
|
+
'five_prime_cis_splice_site',
|
|
867
|
+
'five_prime_clip',
|
|
868
|
+
'five_prime_coding_exon',
|
|
869
|
+
'five_prime_coding_exon_coding_region',
|
|
870
|
+
'five_prime_coding_exon_noncoding_region',
|
|
871
|
+
'five_prime_flanking_region',
|
|
872
|
+
'five_prime_intron',
|
|
873
|
+
'five_prime_noncoding_exon',
|
|
874
|
+
'five_prime_open_reading_frame',
|
|
875
|
+
'five_prime_recoding_site',
|
|
876
|
+
'five_prime_restriction_enzyme_junction',
|
|
877
|
+
'five_prime_sticky_end_restriction_enzyme_cleavage_site',
|
|
878
|
+
'five_prime_terminal_inverted_repeat',
|
|
879
|
+
'five_taurinomethyl_two_thiouridine',
|
|
880
|
+
'five_taurinomethyluridine',
|
|
881
|
+
'five_two_prime_O_dimethylcytidine',
|
|
882
|
+
'five_two_prime_O_dimethyluridine',
|
|
883
|
+
'flanking_region',
|
|
884
|
+
'flanking_repeat',
|
|
885
|
+
'flanking_three_prime_quadruplet_recoding_signal',
|
|
886
|
+
'floxed_gene',
|
|
887
|
+
'foldback_element',
|
|
888
|
+
'foreign_gene',
|
|
889
|
+
'foreign_transposable_element',
|
|
890
|
+
'forkhead_motif',
|
|
891
|
+
'forward_primer',
|
|
892
|
+
'fosmid',
|
|
893
|
+
'four_bp_start_codon',
|
|
894
|
+
'four_demethylwyosine',
|
|
895
|
+
'four_thiouridine',
|
|
896
|
+
'fragile_site',
|
|
897
|
+
'fragment_assembly',
|
|
898
|
+
'functional_candidate_gene',
|
|
899
|
+
'functional_gene_region',
|
|
900
|
+
'fusion_gene',
|
|
901
|
+
'gRNA_gene',
|
|
902
|
+
'galactosyl_queuosine',
|
|
903
|
+
'gamma_turn',
|
|
904
|
+
'gamma_turn_classic',
|
|
905
|
+
'gamma_turn_inverse',
|
|
906
|
+
'gap',
|
|
907
|
+
'gene',
|
|
908
|
+
'gene_array',
|
|
909
|
+
'gene_cassette',
|
|
910
|
+
'gene_cassette_array',
|
|
911
|
+
'gene_component_region',
|
|
912
|
+
'gene_fragment',
|
|
913
|
+
'gene_group',
|
|
914
|
+
'gene_member_region',
|
|
915
|
+
'gene_rearranged_at_DNA_level',
|
|
916
|
+
'gene_segment',
|
|
917
|
+
'gene_silenced_by_DNA_methylation',
|
|
918
|
+
'gene_silenced_by_DNA_modification',
|
|
919
|
+
'gene_silenced_by_RNA_interference',
|
|
920
|
+
'gene_silenced_by_histone_deacetylation',
|
|
921
|
+
'gene_silenced_by_histone_methylation',
|
|
922
|
+
'gene_silenced_by_histone_modification',
|
|
923
|
+
'gene_subarray',
|
|
924
|
+
'gene_trap_construct',
|
|
925
|
+
'gene_with_dicistronic_mRNA',
|
|
926
|
+
'gene_with_dicistronic_primary_transcript',
|
|
927
|
+
'gene_with_dicistronic_transcript',
|
|
928
|
+
'gene_with_edited_transcript',
|
|
929
|
+
'gene_with_mRNA_recoded_by_translational_bypass',
|
|
930
|
+
'gene_with_mRNA_with_frameshift',
|
|
931
|
+
'gene_with_non_canonical_start_codon',
|
|
932
|
+
'gene_with_polyadenylated_mRNA',
|
|
933
|
+
'gene_with_polycistronic_transcript',
|
|
934
|
+
'gene_with_recoded_mRNA',
|
|
935
|
+
'gene_with_start_codon_CUG',
|
|
936
|
+
'gene_with_stop_codon_read_through',
|
|
937
|
+
'gene_with_stop_codon_redefined_as_pyrrolysine',
|
|
938
|
+
'gene_with_stop_codon_redefined_as_selenocysteine',
|
|
939
|
+
'gene_with_trans_spliced_transcript',
|
|
940
|
+
'gene_with_transcript_with_translational_frameshift',
|
|
941
|
+
'genetic_marker',
|
|
942
|
+
'genomic_DNA_contig',
|
|
943
|
+
'genomic_DNA_read',
|
|
944
|
+
'genomic_clone',
|
|
945
|
+
'genomic_island',
|
|
946
|
+
'genomically_contaminated_cDNA_clone',
|
|
947
|
+
'glutamic_acid',
|
|
948
|
+
'glutamic_acid_tRNA_primary_transcript',
|
|
949
|
+
'glutamine',
|
|
950
|
+
'glutamine_tRNA_primary_transcript',
|
|
951
|
+
'glutaminyl_tRNA',
|
|
952
|
+
'glutamyl_tRNA',
|
|
953
|
+
'glycine',
|
|
954
|
+
'glycine_tRNA_primary_transcript',
|
|
955
|
+
'glycyl_tRNA',
|
|
956
|
+
'golden_path',
|
|
957
|
+
'golden_path_fragment',
|
|
958
|
+
'group_1_intron_homing_endonuclease_target_region',
|
|
959
|
+
'group_IIA_intron',
|
|
960
|
+
'group_IIB_intron',
|
|
961
|
+
'group_IIC_intron',
|
|
962
|
+
'group_III_intron',
|
|
963
|
+
'group_II_intron',
|
|
964
|
+
'group_I_intron',
|
|
965
|
+
'guide_RNA',
|
|
966
|
+
'guide_RNA_region',
|
|
967
|
+
'hAT_TIR_transposon',
|
|
968
|
+
'hammerhead_ribozyme',
|
|
969
|
+
'haplotype_block',
|
|
970
|
+
'helitron',
|
|
971
|
+
'helix_turn_helix',
|
|
972
|
+
'heptamer_of_recombination_feature_of_vertebrate_immune_system_gene',
|
|
973
|
+
'heritable_phenotypic_marker',
|
|
974
|
+
'high_identity_region',
|
|
975
|
+
'histidine',
|
|
976
|
+
'histidine_tRNA_primary_transcript',
|
|
977
|
+
'histidyl_tRNA',
|
|
978
|
+
'histone_2AZ_acetylation_site',
|
|
979
|
+
'histone_2A_acetylation_site',
|
|
980
|
+
'histone_2B_acetylation_site',
|
|
981
|
+
'histone_3_acetylation_site',
|
|
982
|
+
'histone_4_acetylation_site',
|
|
983
|
+
'histone_acetylation_site',
|
|
984
|
+
'histone_acylation_region',
|
|
985
|
+
'histone_binding_site',
|
|
986
|
+
'histone_methylation_site',
|
|
987
|
+
'histone_modification',
|
|
988
|
+
'histone_ubiqitination_site',
|
|
989
|
+
'homing_endonuclease_binding_site',
|
|
990
|
+
'homol_D_box',
|
|
991
|
+
'homol_E_box',
|
|
992
|
+
'homologous_chromosome_recognition_and_pairing_locus',
|
|
993
|
+
'homologous_region',
|
|
994
|
+
'hpRNA',
|
|
995
|
+
'hpRNA_gene',
|
|
996
|
+
'hydrophobic_region_of_peptide',
|
|
997
|
+
'hydroxywybutosine',
|
|
998
|
+
'iDNA',
|
|
999
|
+
'i_motif',
|
|
1000
|
+
'immature_peptide_region',
|
|
1001
|
+
'immunoglobulin_gene',
|
|
1002
|
+
'immunoglobulin_pseudogene',
|
|
1003
|
+
'immunoglobulin_region',
|
|
1004
|
+
'imprinting_control_region',
|
|
1005
|
+
'indel_artifact',
|
|
1006
|
+
'inducible_promoter',
|
|
1007
|
+
'inert_DNA_spacer',
|
|
1008
|
+
'inosine',
|
|
1009
|
+
'insertion',
|
|
1010
|
+
'insertion_artifact',
|
|
1011
|
+
'insertion_breakpoint',
|
|
1012
|
+
'insertion_sequence',
|
|
1013
|
+
'insertion_site',
|
|
1014
|
+
'insulator',
|
|
1015
|
+
'insulator_binding_site',
|
|
1016
|
+
'integrated_mobile_genetic_element',
|
|
1017
|
+
'integrated_plasmid',
|
|
1018
|
+
'integration_excision_site',
|
|
1019
|
+
'integron',
|
|
1020
|
+
'intein',
|
|
1021
|
+
'intein_encoding_region',
|
|
1022
|
+
'interband',
|
|
1023
|
+
'interchromosomal_breakpoint',
|
|
1024
|
+
'interchromosomal_translocation',
|
|
1025
|
+
'intergenic_region',
|
|
1026
|
+
'interior_coding_exon',
|
|
1027
|
+
'interior_exon',
|
|
1028
|
+
'interior_intron',
|
|
1029
|
+
'intermediate_element',
|
|
1030
|
+
'internal_Shine_Dalgarno_sequence',
|
|
1031
|
+
'internal_UTR',
|
|
1032
|
+
'internal_eliminated_sequence',
|
|
1033
|
+
'internal_guide_sequence',
|
|
1034
|
+
'internal_ribosome_entry_site',
|
|
1035
|
+
'internal_transcribed_spacer_region',
|
|
1036
|
+
'intrachromosomal_breakpoint',
|
|
1037
|
+
'intrachromosomal_translocation',
|
|
1038
|
+
'intramembrane_polypeptide_region',
|
|
1039
|
+
'intrinsically_unstructured_polypeptide_region',
|
|
1040
|
+
'introgressed_chromosome_region',
|
|
1041
|
+
'intron',
|
|
1042
|
+
'intron_base_5',
|
|
1043
|
+
'intron_domain',
|
|
1044
|
+
'intronic_regulatory_region',
|
|
1045
|
+
'intronic_splice_enhancer',
|
|
1046
|
+
'intronic_splicing_silencer',
|
|
1047
|
+
'invalidated_cDNA_clone',
|
|
1048
|
+
'inversion',
|
|
1049
|
+
'inversion_breakpoint',
|
|
1050
|
+
'inversion_cum_translocation',
|
|
1051
|
+
'inversion_site',
|
|
1052
|
+
'inversion_site_part',
|
|
1053
|
+
'inverted_intrachromosomal_transposition',
|
|
1054
|
+
'inverted_repeat',
|
|
1055
|
+
'inverted_tandem_duplication',
|
|
1056
|
+
'iron_repressed_GATA_element',
|
|
1057
|
+
'iron_responsive_element',
|
|
1058
|
+
'isoleucine',
|
|
1059
|
+
'isoleucine_tRNA_primary_transcript',
|
|
1060
|
+
'isoleucyl_tRNA',
|
|
1061
|
+
'isomiR',
|
|
1062
|
+
'isowyosine',
|
|
1063
|
+
'junction',
|
|
1064
|
+
'kinetoplast_gene',
|
|
1065
|
+
'knob',
|
|
1066
|
+
'kozak_sequence',
|
|
1067
|
+
'lambda_vector',
|
|
1068
|
+
'lariat_intron',
|
|
1069
|
+
'late_origin_of_replication',
|
|
1070
|
+
'left_handed_peptide_helix',
|
|
1071
|
+
'leucine',
|
|
1072
|
+
'leucine_tRNA_primary_transcript',
|
|
1073
|
+
'leucoplast_chromosome',
|
|
1074
|
+
'leucoplast_gene',
|
|
1075
|
+
'leucyl_tRNA',
|
|
1076
|
+
'ligand_binding_site',
|
|
1077
|
+
'ligation_based_read',
|
|
1078
|
+
'lincRNA',
|
|
1079
|
+
'lincRNA_gene',
|
|
1080
|
+
'linear_double_stranded_DNA_chromosome',
|
|
1081
|
+
'linear_double_stranded_RNA_chromosome',
|
|
1082
|
+
'linear_plasmid',
|
|
1083
|
+
'linear_single_stranded_DNA_chromosome',
|
|
1084
|
+
'linear_single_stranded_RNA_chromosome',
|
|
1085
|
+
'linkage_group',
|
|
1086
|
+
'lipoprotein_signal_peptide',
|
|
1087
|
+
'lncRNA',
|
|
1088
|
+
'lncRNA_gene',
|
|
1089
|
+
'lncRNA_primary_transcript',
|
|
1090
|
+
'lncRNA_with_retained_intron',
|
|
1091
|
+
'loR',
|
|
1092
|
+
'locus_control_region',
|
|
1093
|
+
'long_terminal_repeat',
|
|
1094
|
+
'long_terminal_repeat_transcript',
|
|
1095
|
+
'loop',
|
|
1096
|
+
'low_complexity_region',
|
|
1097
|
+
'loxP_site',
|
|
1098
|
+
'lysidine',
|
|
1099
|
+
'lysine',
|
|
1100
|
+
'lysine_tRNA_primary_transcript',
|
|
1101
|
+
'lysosomal_localization_signal',
|
|
1102
|
+
'lysyl_tRNA',
|
|
1103
|
+
'mRNA',
|
|
1104
|
+
'mRNA_contig',
|
|
1105
|
+
'mRNA_read',
|
|
1106
|
+
'mRNA_recoded_by_codon_redefinition',
|
|
1107
|
+
'mRNA_recoded_by_translational_bypass',
|
|
1108
|
+
'mRNA_region',
|
|
1109
|
+
'mRNA_with_frameshift',
|
|
1110
|
+
'mRNA_with_minus_1_frameshift',
|
|
1111
|
+
'mRNA_with_minus_2_frameshift',
|
|
1112
|
+
'mRNA_with_plus_1_frameshift',
|
|
1113
|
+
'mRNA_with_plus_2_frameshift',
|
|
1114
|
+
'macronuclear_chromosome',
|
|
1115
|
+
'macronucleus_destined_segment',
|
|
1116
|
+
'major_TSS',
|
|
1117
|
+
'mannosyl_queuosine',
|
|
1118
|
+
'match',
|
|
1119
|
+
'match_part',
|
|
1120
|
+
'maternal_uniparental_disomy',
|
|
1121
|
+
'maternally_imprinted_gene',
|
|
1122
|
+
'mathematically_defined_repeat',
|
|
1123
|
+
'mating_type_M_box',
|
|
1124
|
+
'mating_type_region',
|
|
1125
|
+
'mating_type_region_motif',
|
|
1126
|
+
'mating_type_region_replication_fork_barrier',
|
|
1127
|
+
'matrix_attachment_site',
|
|
1128
|
+
'mature_protein_region',
|
|
1129
|
+
'mature_protein_region_of_CDS',
|
|
1130
|
+
'mature_transcript',
|
|
1131
|
+
'mature_transcript_region',
|
|
1132
|
+
'maxicircle',
|
|
1133
|
+
'maxicircle_gene',
|
|
1134
|
+
'meiotic_recombination_region',
|
|
1135
|
+
'membrane_peptide_loop',
|
|
1136
|
+
'membrane_structure',
|
|
1137
|
+
'metabolic_island',
|
|
1138
|
+
'metal_binding_site',
|
|
1139
|
+
'methionine',
|
|
1140
|
+
'methionine_tRNA_primary_transcript',
|
|
1141
|
+
'methionyl_tRNA',
|
|
1142
|
+
'methylated_DNA_base_feature',
|
|
1143
|
+
'methylated_adenine',
|
|
1144
|
+
'methylated_cytosine',
|
|
1145
|
+
'methylation_guide_snoRNA',
|
|
1146
|
+
'methylation_guide_snoRNA_gene',
|
|
1147
|
+
'methylation_guide_snoRNA_primary_transcript',
|
|
1148
|
+
'methylinosine',
|
|
1149
|
+
'methylwyosine',
|
|
1150
|
+
'miRNA',
|
|
1151
|
+
'miRNA_antiguide',
|
|
1152
|
+
'miRNA_gene',
|
|
1153
|
+
'miRNA_loop',
|
|
1154
|
+
'miRNA_primary_transcript',
|
|
1155
|
+
'miRNA_primary_transcript_region',
|
|
1156
|
+
'miRNA_stem',
|
|
1157
|
+
'miRNA_target_site',
|
|
1158
|
+
'miR_encoding_Y_RNA_primary_transcript',
|
|
1159
|
+
'miR_encoding_lncRNA_primary_transcript',
|
|
1160
|
+
'miR_encoding_shRNA_primary_transcript',
|
|
1161
|
+
'miR_encoding_snoRNA_primary_transcript',
|
|
1162
|
+
'miR_encoding_tRNA_primary_transcript',
|
|
1163
|
+
'miR_encoding_vaultRNA_primary_transcript',
|
|
1164
|
+
'miRtron',
|
|
1165
|
+
'microarray_oligo',
|
|
1166
|
+
'micronuclear_chromosome',
|
|
1167
|
+
'microsatellite',
|
|
1168
|
+
'mini_exon_donor_RNA',
|
|
1169
|
+
'mini_gene',
|
|
1170
|
+
'minicircle',
|
|
1171
|
+
'minicircle_gene',
|
|
1172
|
+
'minisatellite',
|
|
1173
|
+
'minor_TSS',
|
|
1174
|
+
'minus_10_signal',
|
|
1175
|
+
'minus_12_signal',
|
|
1176
|
+
'minus_1_translational_frameshift',
|
|
1177
|
+
'minus_24_signal',
|
|
1178
|
+
'minus_2_translational_frameshift',
|
|
1179
|
+
'minus_35_signal',
|
|
1180
|
+
'mitochondrial_DNA_read',
|
|
1181
|
+
'mitochondrial_D_loop',
|
|
1182
|
+
'mitochondrial_chromosome',
|
|
1183
|
+
'mitochondrial_contig',
|
|
1184
|
+
'mitochondrial_control_region',
|
|
1185
|
+
'mitochondrial_supercontig',
|
|
1186
|
+
'mitochondrial_targeting_signal',
|
|
1187
|
+
'mitotic_recombination_region',
|
|
1188
|
+
'moR',
|
|
1189
|
+
'mobile_element_deletion',
|
|
1190
|
+
'mobile_element_insertion',
|
|
1191
|
+
'mobile_genetic_element',
|
|
1192
|
+
'mobile_intron',
|
|
1193
|
+
'modified_DNA_base',
|
|
1194
|
+
'modified_L_alanine',
|
|
1195
|
+
'modified_L_arginine',
|
|
1196
|
+
'modified_L_asparagine',
|
|
1197
|
+
'modified_L_aspartic_acid',
|
|
1198
|
+
'modified_L_cysteine',
|
|
1199
|
+
'modified_L_glutamic_acid',
|
|
1200
|
+
'modified_L_glutamine',
|
|
1201
|
+
'modified_L_histidine',
|
|
1202
|
+
'modified_L_isoleucine',
|
|
1203
|
+
'modified_L_leucine',
|
|
1204
|
+
'modified_L_lysine',
|
|
1205
|
+
'modified_L_methionine',
|
|
1206
|
+
'modified_L_phenylalanine',
|
|
1207
|
+
'modified_L_proline',
|
|
1208
|
+
'modified_L_selenocysteine',
|
|
1209
|
+
'modified_L_serine',
|
|
1210
|
+
'modified_L_threonine',
|
|
1211
|
+
'modified_L_tryptophan',
|
|
1212
|
+
'modified_L_tyrosine',
|
|
1213
|
+
'modified_L_valine',
|
|
1214
|
+
'modified_RNA_base_feature',
|
|
1215
|
+
'modified_adenine',
|
|
1216
|
+
'modified_adenosine',
|
|
1217
|
+
'modified_amino_acid_feature',
|
|
1218
|
+
'modified_cytidine',
|
|
1219
|
+
'modified_cytosine',
|
|
1220
|
+
'modified_glycine',
|
|
1221
|
+
'modified_guanine',
|
|
1222
|
+
'modified_guanosine',
|
|
1223
|
+
'modified_inosine',
|
|
1224
|
+
'modified_uridine',
|
|
1225
|
+
'molecular_contact_region',
|
|
1226
|
+
'monocistronic_mRNA',
|
|
1227
|
+
'monocistronic_primary_transcript',
|
|
1228
|
+
'monocistronic_transcript',
|
|
1229
|
+
'monomeric_repeat',
|
|
1230
|
+
'morpholino_oligo',
|
|
1231
|
+
'mt_LSU_rRNA',
|
|
1232
|
+
'mt_LSU_rRNA_gene',
|
|
1233
|
+
'mt_SSU_rRNA',
|
|
1234
|
+
'mt_SSU_rRNA_gene',
|
|
1235
|
+
'mt_gene',
|
|
1236
|
+
'mt_rRNA',
|
|
1237
|
+
'mt_rRNA_gene',
|
|
1238
|
+
'mt_tRNA',
|
|
1239
|
+
'multiplexing_sequence_identifier',
|
|
1240
|
+
'mutated_variant_site',
|
|
1241
|
+
'mutational_hotspot',
|
|
1242
|
+
'n_terminal_region',
|
|
1243
|
+
'natural_plasmid',
|
|
1244
|
+
'natural_transposable_element',
|
|
1245
|
+
'natural_variant_site',
|
|
1246
|
+
'ncRNA',
|
|
1247
|
+
'ncRNA_gene',
|
|
1248
|
+
'nc_conserved_region',
|
|
1249
|
+
'nc_primary_transcript',
|
|
1250
|
+
'negative_sense_ssRNA_viral_sequence',
|
|
1251
|
+
'negatively_autoregulated_gene',
|
|
1252
|
+
'nested_repeat',
|
|
1253
|
+
'nested_tandem_repeat',
|
|
1254
|
+
'nested_transposon',
|
|
1255
|
+
'no_output',
|
|
1256
|
+
'no_sequence_alteration',
|
|
1257
|
+
'non_AUG_initiated_uORF',
|
|
1258
|
+
'non_LTR_retrotransposon',
|
|
1259
|
+
'non_LTR_retrotransposon_polymeric_tract',
|
|
1260
|
+
'non_adjacent_residues',
|
|
1261
|
+
'non_allelic_homologous_recombination_region',
|
|
1262
|
+
'non_canonical_five_prime_splice_site',
|
|
1263
|
+
'non_canonical_start_codon',
|
|
1264
|
+
'non_canonical_three_prime_splice_site',
|
|
1265
|
+
'non_complimentary_stem',
|
|
1266
|
+
'non_cytoplasmic_polypeptide_region',
|
|
1267
|
+
'non_processed_pseudogene',
|
|
1268
|
+
'non_terminal_residue',
|
|
1269
|
+
'non_transcribed_region',
|
|
1270
|
+
'nonamer_of_recombination_feature_of_vertebrate_immune_system_gene',
|
|
1271
|
+
'noncoding_exon',
|
|
1272
|
+
'noncoding_region_of_exon',
|
|
1273
|
+
'novel_sequence_insertion',
|
|
1274
|
+
'nuclear_chromosome',
|
|
1275
|
+
'nuclear_export_signal',
|
|
1276
|
+
'nuclear_gene',
|
|
1277
|
+
'nuclear_localization_signal',
|
|
1278
|
+
'nuclear_mt_pseudogene',
|
|
1279
|
+
'nuclear_rim_localization_signal',
|
|
1280
|
+
'nuclease_binding_site',
|
|
1281
|
+
'nuclease_hypersensitive_site',
|
|
1282
|
+
'nuclease_sensitive_site',
|
|
1283
|
+
'nucleomorph_gene',
|
|
1284
|
+
'nucleomorphic_chromosome',
|
|
1285
|
+
'nucleotide_binding_site',
|
|
1286
|
+
'nucleotide_cleavage_site',
|
|
1287
|
+
'nucleotide_match',
|
|
1288
|
+
'nucleotide_motif',
|
|
1289
|
+
'nucleotide_to_protein_binding_site',
|
|
1290
|
+
'ochre_stop_codon',
|
|
1291
|
+
'octamer_motif',
|
|
1292
|
+
'oligo',
|
|
1293
|
+
'oligo_U_tail',
|
|
1294
|
+
'one_methyl_three_three_amino_three_carboxypropyl_pseudouridine',
|
|
1295
|
+
'one_methyladenosine',
|
|
1296
|
+
'one_methylguanosine',
|
|
1297
|
+
'one_methylinosine',
|
|
1298
|
+
'one_methylpseudouridine',
|
|
1299
|
+
'one_two_prime_O_dimethyladenosine',
|
|
1300
|
+
'one_two_prime_O_dimethylguanosine',
|
|
1301
|
+
'one_two_prime_O_dimethylinosine',
|
|
1302
|
+
'opal_stop_codon',
|
|
1303
|
+
'open_chromatin_region',
|
|
1304
|
+
'operator',
|
|
1305
|
+
'operon',
|
|
1306
|
+
'oriC',
|
|
1307
|
+
'oriT',
|
|
1308
|
+
'oriV',
|
|
1309
|
+
'origin_of_replication',
|
|
1310
|
+
'orphan_CDS',
|
|
1311
|
+
'orthologous_region',
|
|
1312
|
+
'outron',
|
|
1313
|
+
'overlapping_EST_set',
|
|
1314
|
+
'overlapping_feature_set',
|
|
1315
|
+
'paired_end_fragment',
|
|
1316
|
+
'parallel_beta_strand',
|
|
1317
|
+
'paralogous_region',
|
|
1318
|
+
'partial_genomic_sequence_assembly',
|
|
1319
|
+
'partially_processed_cDNA_clone',
|
|
1320
|
+
'paternal_uniparental_disomy',
|
|
1321
|
+
'paternally_imprinted_gene',
|
|
1322
|
+
'pathogenic_island',
|
|
1323
|
+
'peptide_coil',
|
|
1324
|
+
'peptide_helix',
|
|
1325
|
+
'peptide_localization_signal',
|
|
1326
|
+
'peroxywybutosine',
|
|
1327
|
+
'phage_sequence',
|
|
1328
|
+
'phagemid',
|
|
1329
|
+
'phenylalanine',
|
|
1330
|
+
'phenylalanine_tRNA_primary_transcript',
|
|
1331
|
+
'phenylalanyl_tRNA',
|
|
1332
|
+
'pheromone_response_element',
|
|
1333
|
+
'phosphorylation_site',
|
|
1334
|
+
'piRNA',
|
|
1335
|
+
'piRNA_gene',
|
|
1336
|
+
'pi_helix',
|
|
1337
|
+
'piggyBac_TIR_transposon',
|
|
1338
|
+
'plasmid',
|
|
1339
|
+
'plasmid_gene',
|
|
1340
|
+
'plasmid_vector',
|
|
1341
|
+
'plastid_LSU_rRNA',
|
|
1342
|
+
'plastid_LSU_rRNA_gene',
|
|
1343
|
+
'plastid_SSU_rRNA',
|
|
1344
|
+
'plastid_SSU_rRNA_gene',
|
|
1345
|
+
'plastid_gene',
|
|
1346
|
+
'plastid_rRNA',
|
|
1347
|
+
'plastid_rRNA_gene',
|
|
1348
|
+
'plus_1_translational_frameshift',
|
|
1349
|
+
'plus_2_translational_frameshift',
|
|
1350
|
+
'point_centromere',
|
|
1351
|
+
'point_mutation',
|
|
1352
|
+
'polinton',
|
|
1353
|
+
'polyA_primed_cDNA_clone',
|
|
1354
|
+
'polyA_sequence',
|
|
1355
|
+
'polyA_signal_sequence',
|
|
1356
|
+
'polyA_site',
|
|
1357
|
+
'polyA_site_cluster',
|
|
1358
|
+
'polyadenylated_mRNA',
|
|
1359
|
+
'polycistronic_mRNA',
|
|
1360
|
+
'polycistronic_primary_transcript',
|
|
1361
|
+
'polycistronic_transcript',
|
|
1362
|
+
'polymerase_synthesis_read',
|
|
1363
|
+
'polymorphic_pseudogene',
|
|
1364
|
+
'polymorphic_pseudogene_processed_transcript',
|
|
1365
|
+
'polymorphic_pseudogene_with_retained_intron',
|
|
1366
|
+
'polypeptide',
|
|
1367
|
+
'polypeptide_DNA_contact',
|
|
1368
|
+
'polypeptide_binding_motif',
|
|
1369
|
+
'polypeptide_calcium_ion_contact_site',
|
|
1370
|
+
'polypeptide_catalytic_motif',
|
|
1371
|
+
'polypeptide_cobalt_ion_contact_site',
|
|
1372
|
+
'polypeptide_conserved_motif',
|
|
1373
|
+
'polypeptide_conserved_region',
|
|
1374
|
+
'polypeptide_copper_ion_contact_site',
|
|
1375
|
+
'polypeptide_domain',
|
|
1376
|
+
'polypeptide_iron_ion_contact_site',
|
|
1377
|
+
'polypeptide_ligand_contact',
|
|
1378
|
+
'polypeptide_magnesium_ion_contact_site',
|
|
1379
|
+
'polypeptide_manganese_ion_contact_site',
|
|
1380
|
+
'polypeptide_metal_contact',
|
|
1381
|
+
'polypeptide_molybdenum_ion_contact_site',
|
|
1382
|
+
'polypeptide_motif',
|
|
1383
|
+
'polypeptide_nest_left_right_motif',
|
|
1384
|
+
'polypeptide_nest_motif',
|
|
1385
|
+
'polypeptide_nest_right_left_motif',
|
|
1386
|
+
'polypeptide_nickel_ion_contact_site',
|
|
1387
|
+
'polypeptide_region',
|
|
1388
|
+
'polypeptide_repeat',
|
|
1389
|
+
'polypeptide_secondary_structure',
|
|
1390
|
+
'polypeptide_sequencing_information',
|
|
1391
|
+
'polypeptide_structural_motif',
|
|
1392
|
+
'polypeptide_structural_region',
|
|
1393
|
+
'polypeptide_tungsten_ion_contact_site',
|
|
1394
|
+
'polypeptide_turn_motif',
|
|
1395
|
+
'polypeptide_variation_site',
|
|
1396
|
+
'polypeptide_zinc_ion_contact_site',
|
|
1397
|
+
'polypyrimidine_tract',
|
|
1398
|
+
'positional_candidate_gene',
|
|
1399
|
+
'positive_sense_ssRNA_viral_sequence',
|
|
1400
|
+
'positively_autoregulated_gene',
|
|
1401
|
+
'possible_assembly_error',
|
|
1402
|
+
'possible_base_call_error',
|
|
1403
|
+
'post_translationally_modified_region',
|
|
1404
|
+
'post_translationally_regulated_gene',
|
|
1405
|
+
'pre_edited_mRNA',
|
|
1406
|
+
'pre_edited_region',
|
|
1407
|
+
'pre_miRNA',
|
|
1408
|
+
'predicted_gene',
|
|
1409
|
+
'predicted_transcript',
|
|
1410
|
+
'presence_absence_variation',
|
|
1411
|
+
'priRNA',
|
|
1412
|
+
'primary_transcript',
|
|
1413
|
+
'primary_transcript_region',
|
|
1414
|
+
'primer',
|
|
1415
|
+
'primer_binding_site',
|
|
1416
|
+
'primer_match',
|
|
1417
|
+
'probe',
|
|
1418
|
+
'processed_pseudogene',
|
|
1419
|
+
'processed_pseudogenic_rRNA',
|
|
1420
|
+
'processed_pseudogenic_tRNA',
|
|
1421
|
+
'processed_transcript',
|
|
1422
|
+
'prokaryotic_promoter',
|
|
1423
|
+
'proline',
|
|
1424
|
+
'proline_tRNA_primary_transcript',
|
|
1425
|
+
'prolyl_tRNA',
|
|
1426
|
+
'promoter',
|
|
1427
|
+
'promoter_element',
|
|
1428
|
+
'promoter_flanking_region',
|
|
1429
|
+
'promoter_targeting_sequence',
|
|
1430
|
+
'promoter_trap_construct',
|
|
1431
|
+
'propeptide',
|
|
1432
|
+
'propeptide_cleavage_site',
|
|
1433
|
+
'propeptide_region_of_CDS',
|
|
1434
|
+
'prophage',
|
|
1435
|
+
'proplastid_gene',
|
|
1436
|
+
'protease_site',
|
|
1437
|
+
'protein_binding_site',
|
|
1438
|
+
'protein_coding_gene',
|
|
1439
|
+
'protein_coding_primary_transcript',
|
|
1440
|
+
'protein_hmm_match',
|
|
1441
|
+
'protein_match',
|
|
1442
|
+
'protein_protein_contact',
|
|
1443
|
+
'protein_stability_element',
|
|
1444
|
+
'proviral_gene',
|
|
1445
|
+
'proviral_region',
|
|
1446
|
+
'proximal_promoter_element',
|
|
1447
|
+
'pseudogene',
|
|
1448
|
+
'pseudogene_by_unequal_crossing_over',
|
|
1449
|
+
'pseudogene_processed_transcript',
|
|
1450
|
+
'pseudogenic_CDS',
|
|
1451
|
+
'pseudogenic_exon',
|
|
1452
|
+
'pseudogenic_gene_segment',
|
|
1453
|
+
'pseudogenic_rRNA',
|
|
1454
|
+
'pseudogenic_region',
|
|
1455
|
+
'pseudogenic_tRNA',
|
|
1456
|
+
'pseudogenic_transcript',
|
|
1457
|
+
'pseudogenic_transcript_with_retained_intron',
|
|
1458
|
+
'pseudoknot',
|
|
1459
|
+
'pseudouridine',
|
|
1460
|
+
'pseudouridylation_guide_snoRNA',
|
|
1461
|
+
'pseudouridylation_guide_snoRNA_gene',
|
|
1462
|
+
'pumilio_response_element',
|
|
1463
|
+
'purine_to_pyrimidine_transversion',
|
|
1464
|
+
'purine_transition',
|
|
1465
|
+
'pyrimidine_to_purine_transversion',
|
|
1466
|
+
'pyrimidine_transition',
|
|
1467
|
+
'pyrosequenced_read',
|
|
1468
|
+
'pyrrolysine',
|
|
1469
|
+
'pyrrolysine_tRNA_primary_transcript',
|
|
1470
|
+
'pyrrolysyl_tRNA',
|
|
1471
|
+
'queuosine',
|
|
1472
|
+
'rDNA_intergenic_spacer_element',
|
|
1473
|
+
'rDNA_replication_fork_barrier',
|
|
1474
|
+
'rRNA',
|
|
1475
|
+
'rRNA_21S_gene',
|
|
1476
|
+
'rRNA_cleavage_RNA',
|
|
1477
|
+
'rRNA_cleavage_snoRNA_primary_transcript',
|
|
1478
|
+
'rRNA_gene',
|
|
1479
|
+
'rRNA_large_subunit_primary_transcript',
|
|
1480
|
+
'rRNA_primary_transcript',
|
|
1481
|
+
'rRNA_primary_transcript_region',
|
|
1482
|
+
'rRNA_small_subunit_primary_transcript',
|
|
1483
|
+
'rare_fragile_site',
|
|
1484
|
+
'rasiRNA',
|
|
1485
|
+
'read',
|
|
1486
|
+
'read_pair',
|
|
1487
|
+
'reading_frame',
|
|
1488
|
+
'reagent',
|
|
1489
|
+
'rearrangement_region',
|
|
1490
|
+
'reciprocal_chromosomal_translocation',
|
|
1491
|
+
'recoded_codon',
|
|
1492
|
+
'recoded_mRNA',
|
|
1493
|
+
'recoding_pseudoknot',
|
|
1494
|
+
'recoding_stimulatory_region',
|
|
1495
|
+
'recombination_enhancer',
|
|
1496
|
+
'recombination_feature',
|
|
1497
|
+
'recombination_feature_of_rearranged_gene',
|
|
1498
|
+
'recombination_hotspot',
|
|
1499
|
+
'recombination_regulatory_region',
|
|
1500
|
+
'recombination_signal_sequence',
|
|
1501
|
+
'recombinationally_inverted_gene',
|
|
1502
|
+
'recombinationally_rearranged_gene',
|
|
1503
|
+
'recombinationally_rearranged_vertebrate_immune_system_gene',
|
|
1504
|
+
'recursive_splice_site',
|
|
1505
|
+
'ref_miRNA',
|
|
1506
|
+
'region',
|
|
1507
|
+
'regional_centromere',
|
|
1508
|
+
'regional_centromere_central_core',
|
|
1509
|
+
'regional_centromere_inner_repeat_region',
|
|
1510
|
+
'regional_centromere_outer_repeat_region',
|
|
1511
|
+
'regional_centromere_outer_repeat_transcript',
|
|
1512
|
+
'regulatory_promoter_element',
|
|
1513
|
+
'regulatory_region',
|
|
1514
|
+
'regulon',
|
|
1515
|
+
'remark',
|
|
1516
|
+
'repeat_component',
|
|
1517
|
+
'repeat_fragment',
|
|
1518
|
+
'repeat_instability_region',
|
|
1519
|
+
'repeat_region',
|
|
1520
|
+
'repeat_unit',
|
|
1521
|
+
'replication_regulatory_region',
|
|
1522
|
+
'replication_start_site',
|
|
1523
|
+
'replicon',
|
|
1524
|
+
'rescue_gene',
|
|
1525
|
+
'rescue_mini_gene',
|
|
1526
|
+
'rescue_region',
|
|
1527
|
+
'resolution_site',
|
|
1528
|
+
'response_element',
|
|
1529
|
+
'restriction_enzyme_assembly_scar',
|
|
1530
|
+
'restriction_enzyme_binding_site',
|
|
1531
|
+
'restriction_enzyme_cleavage_junction',
|
|
1532
|
+
'restriction_enzyme_five_prime_single_strand_overhang',
|
|
1533
|
+
'restriction_enzyme_recognition_site',
|
|
1534
|
+
'restriction_enzyme_region',
|
|
1535
|
+
'restriction_enzyme_single_strand_overhang',
|
|
1536
|
+
'restriction_enzyme_three_prime_single_strand_overhang',
|
|
1537
|
+
'restriction_fragment',
|
|
1538
|
+
'retinoic_acid_responsive_element',
|
|
1539
|
+
'retrogene',
|
|
1540
|
+
'retron',
|
|
1541
|
+
'retrotransposon',
|
|
1542
|
+
'reverse_Hoogsteen_base_pair',
|
|
1543
|
+
'reverse_primer',
|
|
1544
|
+
'rho_dependent_bacterial_terminator',
|
|
1545
|
+
'rho_independent_bacterial_terminator',
|
|
1546
|
+
'ribonuclease_site',
|
|
1547
|
+
'ribosome_entry_site',
|
|
1548
|
+
'riboswitch',
|
|
1549
|
+
'ribothymidine',
|
|
1550
|
+
'ribozyme',
|
|
1551
|
+
'ribozyme_gene',
|
|
1552
|
+
'right_handed_peptide_helix',
|
|
1553
|
+
'sORF',
|
|
1554
|
+
'sarcin_like_RNA_motif',
|
|
1555
|
+
'satellite_DNA',
|
|
1556
|
+
'sbRNA',
|
|
1557
|
+
'sbRNA_gene',
|
|
1558
|
+
'scRNA',
|
|
1559
|
+
'scRNA_gene',
|
|
1560
|
+
'scRNA_primary_transcript',
|
|
1561
|
+
'scaRNA',
|
|
1562
|
+
'scaRNA_gene',
|
|
1563
|
+
'schellmann_loop',
|
|
1564
|
+
'schellmann_loop_seven',
|
|
1565
|
+
'schellmann_loop_six',
|
|
1566
|
+
'selection_marker',
|
|
1567
|
+
'selenocysteine',
|
|
1568
|
+
'selenocysteine_tRNA_primary_transcript',
|
|
1569
|
+
'selenocysteinyl_tRNA',
|
|
1570
|
+
'self_cleaving_ribozyme',
|
|
1571
|
+
'sense_intronic_ncRNA',
|
|
1572
|
+
'sense_intronic_ncRNA_gene',
|
|
1573
|
+
'sense_overlap_ncRNA',
|
|
1574
|
+
'sense_overlap_ncRNA_gene',
|
|
1575
|
+
'sequence_alteration',
|
|
1576
|
+
'sequence_alteration_artifact',
|
|
1577
|
+
'sequence_assembly',
|
|
1578
|
+
'sequence_comparison',
|
|
1579
|
+
'sequence_conflict',
|
|
1580
|
+
'sequence_difference',
|
|
1581
|
+
'sequence_feature',
|
|
1582
|
+
'sequence_length_alteration',
|
|
1583
|
+
'sequence_motif',
|
|
1584
|
+
'sequence_rearrangement_feature',
|
|
1585
|
+
'sequence_secondary_structure',
|
|
1586
|
+
'sequence_uncertainty',
|
|
1587
|
+
'sequencing_primer',
|
|
1588
|
+
'serine',
|
|
1589
|
+
'serine_tRNA_primary_transcript',
|
|
1590
|
+
'serine_threonine_motif',
|
|
1591
|
+
'serine_threonine_staple_motif',
|
|
1592
|
+
'serine_threonine_turn',
|
|
1593
|
+
'seryl_tRNA',
|
|
1594
|
+
'seven_aminomethyl_seven_deazaguanosine',
|
|
1595
|
+
'seven_cyano_seven_deazaguanosine',
|
|
1596
|
+
'seven_deazaguanosine',
|
|
1597
|
+
'seven_methylguanine',
|
|
1598
|
+
'seven_methylguanosine',
|
|
1599
|
+
'sgRNA',
|
|
1600
|
+
'shRNA',
|
|
1601
|
+
'shRNA_primary_transcript',
|
|
1602
|
+
'shadow_enhancer',
|
|
1603
|
+
'short_tandem_repeat_variation',
|
|
1604
|
+
'siRNA',
|
|
1605
|
+
'signal_anchor',
|
|
1606
|
+
'signal_peptide',
|
|
1607
|
+
'signal_peptide_region_of_CDS',
|
|
1608
|
+
'signature',
|
|
1609
|
+
'silenced_gene',
|
|
1610
|
+
'silencer',
|
|
1611
|
+
'silent_mating_type_cassette_array',
|
|
1612
|
+
'simple_operon',
|
|
1613
|
+
'simple_regulon',
|
|
1614
|
+
'simple_sequence_length_variation',
|
|
1615
|
+
'single_strand_restriction_enzyme_cleavage_site',
|
|
1616
|
+
'single_stranded_DNA_chromosome',
|
|
1617
|
+
'single_stranded_RNA_chromosome',
|
|
1618
|
+
'sisRNA',
|
|
1619
|
+
'site_specific_recombination_target_region',
|
|
1620
|
+
'smFISH_probe',
|
|
1621
|
+
'small_regulatory_ncRNA',
|
|
1622
|
+
'snRNA',
|
|
1623
|
+
'snRNA_gene',
|
|
1624
|
+
'snRNA_primary_transcript',
|
|
1625
|
+
'sncRNA',
|
|
1626
|
+
'sncRNA_gene',
|
|
1627
|
+
'snoRNA',
|
|
1628
|
+
'snoRNA_gene',
|
|
1629
|
+
'snoRNA_primary_transcript',
|
|
1630
|
+
'solo_LTR',
|
|
1631
|
+
'sonicate_fragment',
|
|
1632
|
+
'specific_recombination_site',
|
|
1633
|
+
'splice_enhancer',
|
|
1634
|
+
'splice_junction',
|
|
1635
|
+
'splice_region',
|
|
1636
|
+
'splice_site',
|
|
1637
|
+
'spliced_leader_RNA',
|
|
1638
|
+
'spliceosomal_intron',
|
|
1639
|
+
'spliceosomal_intron_region',
|
|
1640
|
+
'splicing_regulatory_region',
|
|
1641
|
+
'spot_42_RNA',
|
|
1642
|
+
'spurious_protein',
|
|
1643
|
+
'ss_RNA_viral_sequence',
|
|
1644
|
+
'ss_oligo',
|
|
1645
|
+
'st_turn_left_handed_type_one',
|
|
1646
|
+
'st_turn_left_handed_type_two',
|
|
1647
|
+
'st_turn_right_handed_type_one',
|
|
1648
|
+
'st_turn_right_handed_type_two',
|
|
1649
|
+
'start_codon',
|
|
1650
|
+
'stem',
|
|
1651
|
+
'stem_loop',
|
|
1652
|
+
'stem_loop_region',
|
|
1653
|
+
'sterol_regulatory_element',
|
|
1654
|
+
'sticky_end_restriction_enzyme_cleavage_site',
|
|
1655
|
+
'stop_codon',
|
|
1656
|
+
'stop_codon_read_through',
|
|
1657
|
+
'stop_codon_redefined_as_pyrrolysine',
|
|
1658
|
+
'stop_codon_redefined_as_selenocysteine',
|
|
1659
|
+
'stop_codon_signal',
|
|
1660
|
+
'structural_alteration',
|
|
1661
|
+
'substitution',
|
|
1662
|
+
'substitution_artifact',
|
|
1663
|
+
'subtelomere',
|
|
1664
|
+
'sugar_edge_base_pair',
|
|
1665
|
+
'supercontig',
|
|
1666
|
+
'symbiosis_island',
|
|
1667
|
+
'symmetric_RNA_internal_loop',
|
|
1668
|
+
'syntenic_region',
|
|
1669
|
+
'synthetic_oligo',
|
|
1670
|
+
'tRNA',
|
|
1671
|
+
'tRNA_SINE_retrotransposon',
|
|
1672
|
+
'tRNA_gene',
|
|
1673
|
+
'tRNA_intron',
|
|
1674
|
+
'tRNA_primary_transcript',
|
|
1675
|
+
'tRNA_region',
|
|
1676
|
+
'tag',
|
|
1677
|
+
'tandem_duplication',
|
|
1678
|
+
'tandem_repeat',
|
|
1679
|
+
'target_site_duplication',
|
|
1680
|
+
'targeting_vector',
|
|
1681
|
+
'tasiRNA',
|
|
1682
|
+
'tasiRNA_primary_transcript',
|
|
1683
|
+
'teb1_recognition_motif',
|
|
1684
|
+
'telomerase_RNA',
|
|
1685
|
+
'telomerase_RNA_gene',
|
|
1686
|
+
'telomere',
|
|
1687
|
+
'telomeric_D_loop',
|
|
1688
|
+
'telomeric_repeat',
|
|
1689
|
+
'telomeric_transcript',
|
|
1690
|
+
'template_region',
|
|
1691
|
+
'terminal_inverted_repeat',
|
|
1692
|
+
'terminal_inverted_repeat_element',
|
|
1693
|
+
'terminal_repeat',
|
|
1694
|
+
'terminator',
|
|
1695
|
+
'terminator_of_type_2_RNApol_III_promoter',
|
|
1696
|
+
'tetraloop',
|
|
1697
|
+
'tetranucleotide_repeat_microsatellite_feature',
|
|
1698
|
+
'three_methylcytidine',
|
|
1699
|
+
'three_methylpseudouridine',
|
|
1700
|
+
'three_methyluridine',
|
|
1701
|
+
'three_prime_D_heptamer',
|
|
1702
|
+
'three_prime_D_nonamer',
|
|
1703
|
+
'three_prime_D_recombination_signal_sequence',
|
|
1704
|
+
'three_prime_D_spacer',
|
|
1705
|
+
'three_prime_EST',
|
|
1706
|
+
'three_prime_LTR',
|
|
1707
|
+
'three_prime_LTR_component',
|
|
1708
|
+
'three_prime_RACE_clone',
|
|
1709
|
+
'three_prime_RST',
|
|
1710
|
+
'three_prime_UST',
|
|
1711
|
+
'three_prime_UTR',
|
|
1712
|
+
'three_prime_UTR_intron',
|
|
1713
|
+
'three_prime_cis_splice_site',
|
|
1714
|
+
'three_prime_clip',
|
|
1715
|
+
'three_prime_coding_exon',
|
|
1716
|
+
'three_prime_coding_exon_coding_region',
|
|
1717
|
+
'three_prime_coding_exon_noncoding_region',
|
|
1718
|
+
'three_prime_flanking_region',
|
|
1719
|
+
'three_prime_intron',
|
|
1720
|
+
'three_prime_noncoding_exon',
|
|
1721
|
+
'three_prime_overlapping_ncrna',
|
|
1722
|
+
'three_prime_recoding_site',
|
|
1723
|
+
'three_prime_repeat_recoding_signal',
|
|
1724
|
+
'three_prime_restriction_enzyme_junction',
|
|
1725
|
+
'three_prime_stem_loop_structure',
|
|
1726
|
+
'three_prime_sticky_end_restriction_enzyme_cleavage_site',
|
|
1727
|
+
'three_prime_terminal_inverted_repeat',
|
|
1728
|
+
'three_ten_helix',
|
|
1729
|
+
'three_three_amino_three_carboxypropyl_uridine',
|
|
1730
|
+
'three_two_prime_O_dimethyluridine',
|
|
1731
|
+
'threonine',
|
|
1732
|
+
'threonine_tRNA_primary_transcript',
|
|
1733
|
+
'threonyl_tRNA',
|
|
1734
|
+
'tiling_path',
|
|
1735
|
+
'tiling_path_clone',
|
|
1736
|
+
'tiling_path_fragment',
|
|
1737
|
+
'tmRNA',
|
|
1738
|
+
'tmRNA_acceptor_piece',
|
|
1739
|
+
'tmRNA_coding_piece',
|
|
1740
|
+
'tmRNA_gene',
|
|
1741
|
+
'tmRNA_primary_transcript',
|
|
1742
|
+
'tmRNA_region',
|
|
1743
|
+
'tnaORF',
|
|
1744
|
+
'topologically_associated_domain',
|
|
1745
|
+
'topologically_associated_domain_boundary',
|
|
1746
|
+
'topologically_defined_region',
|
|
1747
|
+
'trans_splice_acceptor_site',
|
|
1748
|
+
'trans_splice_donor_site',
|
|
1749
|
+
'trans_splice_junction',
|
|
1750
|
+
'trans_splice_site',
|
|
1751
|
+
'trans_spliced_mRNA',
|
|
1752
|
+
'trans_spliced_transcript',
|
|
1753
|
+
'transcribed_cluster',
|
|
1754
|
+
'transcribed_fragment',
|
|
1755
|
+
'transcribed_processed_pseudogene',
|
|
1756
|
+
'transcribed_spacer_region',
|
|
1757
|
+
'transcribed_unitary_pseudogene',
|
|
1758
|
+
'transcribed_unprocessed_pseudogene',
|
|
1759
|
+
'transcript',
|
|
1760
|
+
'transcript_bound_by_nucleic_acid',
|
|
1761
|
+
'transcript_bound_by_protein',
|
|
1762
|
+
'transcript_region',
|
|
1763
|
+
'transcript_with_translational_frameshift',
|
|
1764
|
+
'transcription_end_site',
|
|
1765
|
+
'transcription_factor_regulatory_site',
|
|
1766
|
+
'transcription_pause_site',
|
|
1767
|
+
'transcription_start_cluster',
|
|
1768
|
+
'transcription_termination_signal',
|
|
1769
|
+
'transcription_unit',
|
|
1770
|
+
'transcriptional_cis_regulatory_region',
|
|
1771
|
+
'transgene',
|
|
1772
|
+
'transgenic_insertion',
|
|
1773
|
+
'transgenic_transposable_element',
|
|
1774
|
+
'transit_peptide',
|
|
1775
|
+
'transit_peptide_region_of_CDS',
|
|
1776
|
+
'transition',
|
|
1777
|
+
'translated_nucleotide_match',
|
|
1778
|
+
'translated_processed_pseudogene',
|
|
1779
|
+
'translated_unprocessed_pseudogene',
|
|
1780
|
+
'translation_regulatory_region',
|
|
1781
|
+
'translational_frameshift',
|
|
1782
|
+
'translationally_regulated_gene',
|
|
1783
|
+
'translocation',
|
|
1784
|
+
'translocation_breakpoint',
|
|
1785
|
+
'translocation_element',
|
|
1786
|
+
'transmembrane_helix',
|
|
1787
|
+
'transmembrane_polypeptide_region',
|
|
1788
|
+
'transposable_element',
|
|
1789
|
+
'transposable_element_CDS',
|
|
1790
|
+
'transposable_element_flanking_region',
|
|
1791
|
+
'transposable_element_gene',
|
|
1792
|
+
'transposable_element_insertion_site',
|
|
1793
|
+
'transposable_element_pseudogene',
|
|
1794
|
+
'transposon_fragment',
|
|
1795
|
+
'transversion',
|
|
1796
|
+
'trinucleotide_repeat_microsatellite_feature',
|
|
1797
|
+
'tryptophan',
|
|
1798
|
+
'tryptophan_tRNA_primary_transcript',
|
|
1799
|
+
'tryptophanyl_tRNA',
|
|
1800
|
+
'twintron',
|
|
1801
|
+
'two_methyladenosine',
|
|
1802
|
+
'two_methylthio_N6_cis_hydroxyisopentenyl_adenosine',
|
|
1803
|
+
'two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine',
|
|
1804
|
+
'two_methylthio_N6_isopentenyladenosine',
|
|
1805
|
+
'two_methylthio_N6_methyladenosine',
|
|
1806
|
+
'two_methylthio_N6_threonyl_carbamoyladenosine',
|
|
1807
|
+
'two_prime_O_methyladenosine',
|
|
1808
|
+
'two_prime_O_methylcytidine',
|
|
1809
|
+
'two_prime_O_methylguanosine',
|
|
1810
|
+
'two_prime_O_methylinosine',
|
|
1811
|
+
'two_prime_O_methylpseudouridine',
|
|
1812
|
+
'two_prime_O_methyluridine',
|
|
1813
|
+
'two_prime_O_ribosyladenosine_phosphate',
|
|
1814
|
+
'two_prime_O_ribosylguanosine_phosphate',
|
|
1815
|
+
'two_thio_two_prime_O_methyluridine',
|
|
1816
|
+
'two_thiocytidine',
|
|
1817
|
+
'two_thiouridine',
|
|
1818
|
+
'tyrosine',
|
|
1819
|
+
'tyrosine_tRNA_primary_transcript',
|
|
1820
|
+
'tyrosyl_tRNA',
|
|
1821
|
+
'uORF',
|
|
1822
|
+
'ultracontig',
|
|
1823
|
+
'unassigned_supercontig',
|
|
1824
|
+
'unconfirmed_transcript',
|
|
1825
|
+
'undermodified_hydroxywybutosine',
|
|
1826
|
+
'unedited_region',
|
|
1827
|
+
'unigene_cluster',
|
|
1828
|
+
'unit_of_gene_expression',
|
|
1829
|
+
'unitary_pseudogene',
|
|
1830
|
+
'unitary_pseudogenic_rRNA',
|
|
1831
|
+
'unitary_pseudogenic_tRNA',
|
|
1832
|
+
'unprocessed_pseudogenic_rRNA',
|
|
1833
|
+
'unprocessed_pseudogenic_tRNA',
|
|
1834
|
+
'unspecified_indel',
|
|
1835
|
+
'untranslated_region_polycistronic_mRNA',
|
|
1836
|
+
'upstream_AUG_codon',
|
|
1837
|
+
'uridine_five_oxyacetic_acid',
|
|
1838
|
+
'uridine_five_oxyacetic_acid_methyl_ester',
|
|
1839
|
+
'vacuolar_sorting_signal',
|
|
1840
|
+
'validated_cDNA_clone',
|
|
1841
|
+
'valine',
|
|
1842
|
+
'valine_tRNA_primary_transcript',
|
|
1843
|
+
'valyl_tRNA',
|
|
1844
|
+
'vaultRNA_primary_transcript',
|
|
1845
|
+
'vault_RNA',
|
|
1846
|
+
'vault_RNA_gene',
|
|
1847
|
+
'vector_replicon',
|
|
1848
|
+
'vertebrate_immune_system_gene',
|
|
1849
|
+
'vertebrate_immune_system_gene_recombination_feature',
|
|
1850
|
+
'vertebrate_immune_system_gene_recombination_signal_feature',
|
|
1851
|
+
'vertebrate_immune_system_gene_recombination_spacer',
|
|
1852
|
+
'vertebrate_immune_system_pseudogene',
|
|
1853
|
+
'vertebrate_immunoglobulin_T_cell_receptor_gene_cluster',
|
|
1854
|
+
'vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster',
|
|
1855
|
+
'vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment',
|
|
1856
|
+
'vertebrate_immunoglobulin_T_cell_receptor_segment',
|
|
1857
|
+
'viral_promoter',
|
|
1858
|
+
'viral_sequence',
|
|
1859
|
+
'virtual_sequence',
|
|
1860
|
+
'wild_type_rescue_gene',
|
|
1861
|
+
'wobble_base_pair',
|
|
1862
|
+
'wybutosine',
|
|
1863
|
+
'wyosine',
|
|
1864
|
+
'zinc_finger_binding_site',
|
|
1865
|
+
'zinc_repressed_element',
|
|
1866
|
+
];
|
|
1867
|
+
exports.default = soSequenceTypes;
|
|
1868
|
+
//# sourceMappingURL=soSequenceTypes.js.map
|