@apollo-annotation/jbrowse-plugin-apollo 0.1.8 → 0.1.11

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Files changed (55) hide show
  1. package/dist/index.esm.js +4 -4
  2. package/dist/index.esm.js.map +1 -1
  3. package/dist/jbrowse-plugin-apollo.cjs.development.js +68 -68
  4. package/dist/jbrowse-plugin-apollo.cjs.development.js.map +1 -1
  5. package/dist/jbrowse-plugin-apollo.cjs.production.min.js +1 -1
  6. package/dist/jbrowse-plugin-apollo.cjs.production.min.js.map +1 -1
  7. package/dist/jbrowse-plugin-apollo.umd.development.js +77 -78
  8. package/dist/jbrowse-plugin-apollo.umd.development.js.map +1 -1
  9. package/dist/jbrowse-plugin-apollo.umd.production.min.js +1 -1
  10. package/dist/jbrowse-plugin-apollo.umd.production.min.js.map +1 -1
  11. package/package.json +5 -5
  12. package/src/ApolloInternetAccount/model.ts +2 -2
  13. package/src/ApolloSixFrameRenderer/components/ApolloRendering.tsx +2 -2
  14. package/src/BackendDrivers/BackendDriver.ts +3 -3
  15. package/src/BackendDrivers/CollaborationServerDriver.ts +3 -9
  16. package/src/BackendDrivers/DesktopFileDriver.ts +3 -3
  17. package/src/BackendDrivers/InMemoryFileDriver.ts +3 -6
  18. package/src/ChangeManager.ts +2 -2
  19. package/src/FeatureDetailsWidget/Attributes.tsx +2 -2
  20. package/src/FeatureDetailsWidget/BasicInformation.tsx +2 -2
  21. package/src/FeatureDetailsWidget/RelatedFeature.tsx +1 -4
  22. package/src/FeatureDetailsWidget/Sequence.tsx +2 -2
  23. package/src/FeatureDetailsWidget/model.ts +1 -4
  24. package/src/LinearApolloDisplay/glyphs/BoxGlyph.ts +2 -2
  25. package/src/LinearApolloDisplay/glyphs/CanonicalGeneGlyph.ts +2 -2
  26. package/src/LinearApolloDisplay/glyphs/GenericChildGlyph.ts +1 -1
  27. package/src/LinearApolloDisplay/glyphs/Glyph.ts +1 -1
  28. package/src/LinearApolloDisplay/glyphs/ImplicitExonGeneGlyph.ts +2 -2
  29. package/src/LinearApolloDisplay/stateModel/base.ts +1 -1
  30. package/src/LinearApolloDisplay/stateModel/getGlyph.ts +1 -1
  31. package/src/LinearApolloDisplay/stateModel/glyphs.ts +1 -1
  32. package/src/LinearApolloDisplay/stateModel/layouts.ts +1 -1
  33. package/src/LinearApolloDisplay/stateModel/mouseEvents.ts +1 -1
  34. package/src/OntologyManager/util.ts +1 -1
  35. package/src/SixFrameFeatureDisplay/stateModel.ts +1 -1
  36. package/src/TabularEditor/HybridGrid/ChangeHandling.ts +2 -2
  37. package/src/TabularEditor/HybridGrid/Feature.tsx +1 -1
  38. package/src/TabularEditor/HybridGrid/FeatureAttributes.tsx +1 -1
  39. package/src/TabularEditor/HybridGrid/featureContextMenuItems.ts +1 -1
  40. package/src/components/AddAssembly.tsx +1 -1
  41. package/src/components/AddChildFeature.tsx +2 -2
  42. package/src/components/AddFeature.tsx +1 -1
  43. package/src/components/CopyFeature.tsx +2 -2
  44. package/src/components/DeleteAssembly.tsx +1 -1
  45. package/src/components/DeleteFeature.tsx +2 -2
  46. package/src/components/DownloadGFF3.tsx +2 -2
  47. package/src/components/ImportFeatures.tsx +1 -1
  48. package/src/components/ManageUsers.tsx +1 -1
  49. package/src/components/ModifyFeatureAttribute.tsx +2 -2
  50. package/src/components/ViewChangeLog.tsx +1 -1
  51. package/src/extensions/annotationFromPileup.ts +2 -2
  52. package/src/index.ts +2 -2
  53. package/src/session/ClientDataStore.ts +2 -2
  54. package/src/session/session.ts +3 -6
  55. package/src/util/loadAssemblyIntoClient.ts +2 -5
package/dist/index.esm.js CHANGED
@@ -1,5 +1,5 @@
1
- import { checkRegistry, changeRegistry, Change, isAssemblySpecificChange } from '@apollo-annotation/apollo-common';
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- import { AddAssemblyFromExternalChange, AddAssemblyAndFeaturesFromFileChange, AddAssemblyFromFileChange, AddFeatureChange, DeleteAssemblyChange, DeleteFeatureChange, makeGFF3Feature, AddFeaturesFromFileChange, UserChange, DeleteUserChange, FeatureAttributeChange, getDecodedToken, makeUserSessionId, LocationEndChange, LocationStartChange, TypeChange, StrandChange, splitStringIntoChunks, DiscontinuousLocationStartChange, DiscontinuousLocationEndChange, validationRegistry, ValidationResultSet, changes, CDSCheck, CoreValidation, ParentChildValidation } from '@apollo-annotation/apollo-shared';
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+ import { checkRegistry, changeRegistry, Change, isAssemblySpecificChange } from '@apollo-annotation/common';
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+ import { AddAssemblyFromExternalChange, AddAssemblyAndFeaturesFromFileChange, AddAssemblyFromFileChange, AddFeatureChange, DeleteAssemblyChange, DeleteFeatureChange, makeGFF3Feature, AddFeaturesFromFileChange, UserChange, DeleteUserChange, FeatureAttributeChange, getDecodedToken, makeUserSessionId, LocationEndChange, LocationStartChange, TypeChange, StrandChange, splitStringIntoChunks, DiscontinuousLocationStartChange, DiscontinuousLocationEndChange, validationRegistry, ValidationResultSet, changes, CDSCheck, CoreValidation, ParentChildValidation } from '@apollo-annotation/shared';
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  import { ConfigurationSchema, readConfObject, getConf, ConfigurationReference } from '@jbrowse/core/configuration';
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  import { BaseInternetAccountConfig, InternetAccount, RendererType, TextSearchAdapterType, BaseDisplay, WidgetType, createBaseTrackConfig, TrackType, createBaseTrackModel, InternetAccountType, DisplayType } from '@jbrowse/core/pluggableElementTypes';
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  import Plugin from '@jbrowse/core/Plugin';
@@ -40,7 +40,7 @@ import { BaseSequenceAdapter, BaseAdapter } from '@jbrowse/core/data_adapters/Ba
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  import { ObservableCreate } from '@jbrowse/core/util/rxjs';
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  import SimpleFeature from '@jbrowse/core/util/simpleFeature';
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  import BaseResult from '@jbrowse/core/TextSearch/BaseResults';
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- import { AnnotationFeature, ApolloAssembly, CheckResult, ApolloRefSeq } from '@apollo-annotation/apollo-mst';
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+ import { AnnotationFeature, ApolloAssembly, CheckResult, ApolloRefSeq } from '@apollo-annotation/mst';
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  import ClearIcon from '@mui/icons-material/Clear';
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  import UnfoldLessIcon from '@mui/icons-material/UnfoldLess';
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  import { getParentRenderProps } from '@jbrowse/core/util/tracks';
@@ -48,7 +48,7 @@ import ExpandLessIcon from '@mui/icons-material/ExpandLess';
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  import ExpandMoreIcon from '@mui/icons-material/ExpandMore';
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  import ErrorIcon from '@mui/icons-material/Error';
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- var version = "0.1.8";
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+ var version = "0.1.11";
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  const ApolloConfigSchema = ConfigurationSchema('ApolloInternetAccount', {
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  baseURL: {