@apollo-annotation/common 0.3.9 → 0.3.11
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@apollo-annotation/common",
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-
"version": "0.3.
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"version": "0.3.11",
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"repository": {
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"type": "git",
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"url": "https://github.com/GMOD/Apollo3.git",
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@@ -11,13 +11,13 @@
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"build": "tsc"
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},
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"dependencies": {
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-
"@apollo-annotation/schemas": "^0.3.
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"@apollo-annotation/schemas": "^0.3.11",
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"@jbrowse/core": "^3.6.5",
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"bson-objectid": "^2.0.4",
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"tslib": "^2.3.1"
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},
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"devDependencies": {
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-
"@apollo-annotation/mst": "^0.3.
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"@apollo-annotation/mst": "^0.3.11",
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"@gmod/gff": "^2.0.0",
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"@nestjs/common": "^10.1.0",
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"@nestjs/core": "^10.1.0",
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@@ -1,4 +1,7 @@
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/* eslint-disable @typescript-eslint/no-unnecessary-condition */
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import { type AnnotationFeatureSnapshot } from '@apollo-annotation/mst'
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import { type Feature } from '@apollo-annotation/schemas'
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import {
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Change,
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type ChangeOptions,
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@@ -26,4 +29,33 @@ export abstract class AssemblySpecificChange extends Change {
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super(json, options)
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this.assembly = json.assembly
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}
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getIndexedIds(
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feature: AnnotationFeatureSnapshot | Feature,
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idsToIndex: string[] | undefined,
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): string[] {
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const indexedIds: string[] = []
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for (const additionalId of idsToIndex ?? []) {
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const { attributes } = feature
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// eslint-disable-next-line @typescript-eslint/no-unsafe-assignment
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const idValue: string[] =
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attributes instanceof Map
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? attributes.get(additionalId)
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: attributes?.[additionalId]
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if (idValue) {
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indexedIds.push(idValue[0])
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}
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}
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if (feature.children) {
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const childrenIterable =
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feature.children instanceof Map
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? feature.children.values()
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: Object.values(feature.children)
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for (const child of childrenIterable) {
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const childIndexedIds = this.getIndexedIds(child, idsToIndex)
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indexedIds.push(...childIndexedIds)
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}
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}
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return indexedIds
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}
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}
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