@apollo-annotation/common 0.3.7 → 0.3.9
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/Change.d.ts +1 -1
- package/dist/Check.d.ts +1 -0
- package/dist/Check.js.map +1 -1
- package/dist/Operation.d.ts +5 -3
- package/dist/Operation.js.map +1 -1
- package/dist/tsconfig.tsbuildinfo +1 -1
- package/package.json +8 -7
- package/src/Change.ts +1 -1
- package/src/Check.ts +1 -0
- package/src/Operation.ts +6 -3
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@apollo-annotation/common",
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-
"version": "0.3.
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+
"version": "0.3.9",
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"repository": {
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"type": "git",
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"url": "https://github.com/GMOD/Apollo3.git",
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@@ -11,23 +11,24 @@
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"build": "tsc"
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},
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"dependencies": {
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-
"@apollo-annotation/schemas": "^0.3.
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"@jbrowse/core": "^3.
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"@apollo-annotation/schemas": "^0.3.9",
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"@jbrowse/core": "^3.6.5",
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"bson-objectid": "^2.0.4",
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"tslib": "^2.3.1"
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},
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"devDependencies": {
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"@apollo-annotation/mst": "^0.3.
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"@apollo-annotation/mst": "^0.3.9",
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"@gmod/gff": "^2.0.0",
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"@nestjs/common": "^10.1.0",
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"@nestjs/core": "^10.1.0",
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"@types/node": "^
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"@types/node": "^20.19.15",
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"generic-filehandle": "^3.0.0",
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"mongoose": "^6.12.0",
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"typescript": "^5.5.3"
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},
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"peerDependencies": {
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-
"@mui/material": "^
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"@mui/x-data-grid": "^
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"@mui/material": "^7.0.0",
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"@mui/x-data-grid": "^8.0.0",
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"mobx": "^6.6.1",
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"mobx-react": "^7.2.1",
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"mobx-state-tree": "^5.4.0",
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package/src/Change.ts
CHANGED
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@@ -27,7 +27,7 @@ export interface ClientDataStore {
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assemblyName?: string,
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internetAccountId?: string,
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): AppRootModel['internetAccounts'][0]
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loadFeatures(regions: Region[]): void
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loadFeatures(regions: Region[]): Promise<void>
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loadRefSeq(regions: Region[]): void
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getFeature(featureId: string): AnnotationFeature | undefined
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addFeature(assemblyId: string, feature: AnnotationFeatureSnapshot): void
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package/src/Check.ts
CHANGED
package/src/Operation.ts
CHANGED
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@@ -1,7 +1,6 @@
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/* eslint-disable @typescript-eslint/no-confusing-void-expression */
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/* eslint-disable @typescript-eslint/no-unnecessary-condition */
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/* eslint-disable @typescript-eslint/restrict-template-expressions */
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import { type ReadStream } from 'node:fs'
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import { type FileHandle } from 'node:fs/promises'
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import {
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@@ -14,6 +13,7 @@ import {
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type RefSeqDocument,
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type UserDocument,
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} from '@apollo-annotation/schemas'
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import { type GFF3Feature } from '@gmod/gff'
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import { type LoggerService } from '@nestjs/common'
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import { type GenericFilehandle } from 'generic-filehandle'
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import { type ClientSession, type Model } from 'mongoose'
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@@ -43,9 +43,12 @@ export interface ServerDataStore {
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jbrowseConfigModel: Model<JBrowseConfigDocument>
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session: ClientSession
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filesService: {
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-
getFileStream(file: FileDocument):
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getFileStream(file: FileDocument): ReadableStream<Uint8Array>
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getFileHandle(file: FileDocument): GenericFilehandle
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parseGFF3(
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parseGFF3(
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stream: ReadableStream<Uint8Array>,
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parseOptions?: { bufferSize?: number },
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): ReadableStream<GFF3Feature>
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create(createFileDto: CreateFileDto): void
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remove(id: string): void
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}
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