@andespindola/brainlink 0.1.0-beta.7 → 0.1.0-beta.70
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/AGENTS.md +8 -5
- package/CHANGELOG.md +58 -2
- package/CONTRIBUTING.md +2 -2
- package/COPYRIGHT.md +5 -0
- package/README.md +266 -20
- package/SECURITY.md +1 -1
- package/dist/application/add-note.js +62 -13
- package/dist/application/analyze-vault.js +95 -8
- package/dist/application/build-context.js +56 -1
- package/dist/application/dedupe-notes.js +226 -0
- package/dist/application/frontend/client-css.js +138 -103
- package/dist/application/frontend/client-html.js +47 -41
- package/dist/application/frontend/client-js.js +2111 -128
- package/dist/application/frontend/client-worker-js.js +66 -0
- package/dist/application/get-graph-layout.js +18 -6
- package/dist/application/get-graph-node.js +12 -0
- package/dist/application/get-graph-summary.js +12 -0
- package/dist/application/get-graph.js +3 -3
- package/dist/application/import-legacy-sqlite.js +296 -0
- package/dist/application/index-vault.js +252 -19
- package/dist/application/list-agents.js +3 -3
- package/dist/application/list-links.js +5 -5
- package/dist/application/migrate-vault.js +91 -0
- package/dist/application/offline-pack-backup.js +44 -0
- package/dist/application/search-graph-node-ids.js +12 -0
- package/dist/application/search-knowledge.js +75 -5
- package/dist/application/server/routes.js +102 -1
- package/dist/application/start-server.js +75 -4
- package/dist/application/watch-vault.js +23 -2
- package/dist/benchmarks/large-vault.js +1 -1
- package/dist/cli/commands/agent-commands.js +419 -0
- package/dist/cli/commands/config-commands.js +167 -0
- package/dist/cli/commands/read-commands.js +25 -8
- package/dist/cli/commands/write-commands.js +989 -10
- package/dist/cli/main.js +4 -0
- package/dist/cli/runtime.js +5 -2
- package/dist/domain/context.js +53 -11
- package/dist/domain/embeddings.js +2 -1
- package/dist/domain/graph-layout.js +62 -15
- package/dist/domain/markdown.js +36 -4
- package/dist/domain/middle-out.js +18 -0
- package/dist/infrastructure/config.js +132 -8
- package/dist/infrastructure/file-index.js +358 -0
- package/dist/infrastructure/file-system-vault.js +30 -0
- package/dist/infrastructure/index-state.js +56 -0
- package/dist/infrastructure/paths.js +9 -1
- package/dist/infrastructure/private-pack-codec.js +134 -0
- package/dist/infrastructure/search-packs.js +452 -0
- package/dist/infrastructure/session-state.js +172 -0
- package/dist/mcp/main.js +11 -3
- package/dist/mcp/server.js +27 -2
- package/dist/mcp/startup.js +35 -0
- package/dist/mcp/tools.js +633 -19
- package/docs/AGENT_USAGE.md +178 -16
- package/docs/ARCHITECTURE.md +37 -26
- package/docs/QUICKSTART.md +111 -0
- package/package.json +6 -4
- package/dist/infrastructure/sqlite/document-writer.js +0 -51
- package/dist/infrastructure/sqlite/graph-reader.js +0 -120
- package/dist/infrastructure/sqlite/schema.js +0 -111
- package/dist/infrastructure/sqlite/search-reader.js +0 -156
- package/dist/infrastructure/sqlite/types.js +0 -1
- package/dist/infrastructure/sqlite-index.js +0 -25
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@@ -1,14 +1,17 @@
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import { getBrokenLinksReport, getOrphansReport, getStats, validateVault } from '../analyze-vault.js';
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import { buildContextPackage } from '../build-context.js';
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import { getGraph } from '../get-graph.js';
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import { getGraphNode } from '../get-graph-node.js';
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import { getGraphLayout } from '../get-graph-layout.js';
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import { listAgents } from '../list-agents.js';
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import { listBacklinks, listLinks } from '../list-links.js';
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import { searchGraphNodeIds } from '../search-graph-node-ids.js';
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import { searchKnowledge } from '../search-knowledge.js';
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import { loadBrainlinkConfig, sanitizeSearchMode } from '../../infrastructure/config.js';
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import { createClientCss } from '../frontend/client-css.js';
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import { createClientHtml } from '../frontend/client-html.js';
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import { createClientJs } from '../frontend/client-js.js';
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import { createClientWorkerJs } from '../frontend/client-worker-js.js';
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import { contentTypes, createJsonResponse, isReadMethod, parsePositiveInteger } from './http.js';
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const readSearchMode = async (url) => {
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const config = await loadBrainlinkConfig();
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@@ -49,6 +52,81 @@ const sameEntityTag = (candidate, signature) => {
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return decodeEntityTag(candidate) === signature;
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};
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const readAgentQuery = (url) => url.searchParams.get('agent') ?? undefined;
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const compactGraphLayoutThreshold = 12_000;
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const compactGraphLayoutEdgeLimit = 60_000;
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const compactGraphLayoutEdgeLimitFor = (nodeCount) => {
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if (nodeCount > 100_000)
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return 15_000;
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if (nodeCount > 50_000)
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return 22_000;
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if (nodeCount > 25_000)
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return 30_000;
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return compactGraphLayoutEdgeLimit;
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};
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const edgeWeight = (weight) => Number.isFinite(weight) ? Number(weight) : 1;
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const edgeKey = (source, target, priority) => `${source}|${target}|${priority}`;
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const selectCompactEdges = (layout, limit) => {
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const resolvedEdges = layout.edges.filter((edge) => typeof edge.target === 'string' && edge.target.length > 0);
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if (resolvedEdges.length <= limit) {
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return resolvedEdges;
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}
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const bestEdgeByEndpoint = new Map();
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for (let index = 0; index < resolvedEdges.length; index += 1) {
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const edge = resolvedEdges[index];
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const endpoints = [edge.source, edge.target];
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for (let endpointIndex = 0; endpointIndex < endpoints.length; endpointIndex += 1) {
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const endpoint = endpoints[endpointIndex];
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const previous = bestEdgeByEndpoint.get(endpoint);
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if (!previous || edgeWeight(edge.weight) > edgeWeight(previous.weight)) {
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bestEdgeByEndpoint.set(endpoint, edge);
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}
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}
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}
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const selected = new Map();
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for (const edge of bestEdgeByEndpoint.values()) {
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selected.set(edgeKey(edge.source, edge.target, edge.priority), edge);
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}
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if (selected.size > limit) {
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return Array.from(selected.values())
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.sort((left, right) => edgeWeight(right.weight) - edgeWeight(left.weight))
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.slice(0, limit);
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}
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const byWeight = [...resolvedEdges].sort((left, right) => edgeWeight(right.weight) - edgeWeight(left.weight));
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for (let index = 0; index < byWeight.length; index += 1) {
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if (selected.size >= limit) {
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break;
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}
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const edge = byWeight[index];
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const key = edgeKey(edge.source, edge.target, edge.priority);
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if (!selected.has(key)) {
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selected.set(key, edge);
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}
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}
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return Array.from(selected.values());
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};
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const stripLayoutContent = (layout) => ({
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...layout,
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nodes: layout.nodes.map(({ content, ...node }) => node)
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});
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const compactLayoutPayload = (layout) => {
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const edgeLimit = compactGraphLayoutEdgeLimitFor(layout.nodes.length);
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const compactEdges = selectCompactEdges(layout, edgeLimit);
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const compactNodes = layout.nodes.map((node) => [node.id, node.title, node.x, node.y, node.group, node.segment]);
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const compactEdgeRows = compactEdges
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.map((edge) => [edge.source, edge.target, edge.weight, edge.priority]);
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return {
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compact: true,
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layout: {
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nodes: compactNodes,
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edges: compactEdgeRows
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},
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totals: {
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nodes: layout.nodes.length,
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edges: layout.edges.length
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}
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};
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};
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const encodeLayoutPayload = (layout) => layout.nodes.length > compactGraphLayoutThreshold ? compactLayoutPayload(layout) : { compact: false, layout: stripLayoutContent(layout) };
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export const route = async (request, url, vaultPath) => {
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if (isReadMethod(request) && (url.pathname === '/' || url.pathname === '/index.html')) {
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return createResponse(createClientHtml(), 200, contentTypes['.html']);
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@@ -59,6 +137,9 @@ export const route = async (request, url, vaultPath) => {
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if (isReadMethod(request) && url.pathname === '/app.js') {
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return createResponse(createClientJs(), 200, contentTypes['.js']);
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}
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if (isReadMethod(request) && url.pathname === '/app-worker.js') {
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return createResponse(createClientWorkerJs(), 200, contentTypes['.js']);
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}
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if (isReadMethod(request) && url.pathname === '/api/graph') {
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return createResponse(createJsonResponse(await getGraph(vaultPath, readAgentQuery(url))), 200, contentTypes['.json']);
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}
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@@ -67,7 +148,7 @@ export const route = async (request, url, vaultPath) => {
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const requestEtags = request.headers['if-none-match'];
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const notModified = sameEntityTag(requestEtags, signature);
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const etag = encodeEntityTag(signature);
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const body = createJsonResponse({ signature, layout });
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const body = createJsonResponse({ signature, ...encodeLayoutPayload(layout) });
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const jsonResponse = createResponse(body, 200, contentTypes['.json']);
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const notModifiedResponse = createResponse('', 304, contentTypes['.json']);
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if (notModified) {
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}
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};
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}
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if (isReadMethod(request) && url.pathname === '/api/graph-node') {
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const id = url.searchParams.get('id')?.trim() ?? '';
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if (!id) {
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return createResponse(createJsonResponse({ error: 'Missing id query parameter' }), 400, contentTypes['.json']);
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}
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const node = await getGraphNode(vaultPath, id, readAgentQuery(url));
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if (!node) {
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return createResponse(createJsonResponse({ error: 'Node not found' }), 404, contentTypes['.json']);
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}
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return createResponse(createJsonResponse({ node }), 200, contentTypes['.json']);
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}
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if (isReadMethod(request) && url.pathname === '/api/graph-filter') {
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const query = url.searchParams.get('q')?.trim() ?? '';
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const limit = parsePositiveInteger(url.searchParams.get('limit'), 1200);
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if (!query) {
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return createResponse(createJsonResponse({ query, nodeIds: [] }), 200, contentTypes['.json']);
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}
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const nodeIds = await searchGraphNodeIds(vaultPath, query, limit, readAgentQuery(url));
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return createResponse(createJsonResponse({ query, nodeIds }), 200, contentTypes['.json']);
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}
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if (isReadMethod(request) && url.pathname === '/api/agents') {
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return createResponse(createJsonResponse({ agents: await listAgents(vaultPath) }), 200, contentTypes['.json']);
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}
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import { createServer } from 'node:http';
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import { brotliCompressSync, constants, gzipSync } from 'node:zlib';
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import { indexVault } from './index-vault.js';
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import { startVaultWatcher } from './watch-vault.js';
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import { assertLoopbackHost } from './server/host-security.js';
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import { contentTypes, createJsonResponse, isHttpError } from './server/http.js';
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import { route } from './server/routes.js';
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const compressionThresholdBytes = 1024;
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const normalizeEncodingToken = (value) => value.trim().toLowerCase();
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const supportsEncoding = (acceptEncoding, target) => {
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if (!acceptEncoding) {
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return false;
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}
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return acceptEncoding
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.split(',')
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.map((entry) => entry.split(';')[0] ?? '')
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.map(normalizeEncodingToken)
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.includes(target);
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};
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const isCompressibleContentType = (contentType) => {
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const normalized = contentType?.toLowerCase() ?? '';
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return (normalized.includes('application/json') ||
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normalized.includes('text/javascript') ||
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normalized.includes('text/css') ||
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normalized.includes('text/html') ||
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normalized.startsWith('text/'));
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};
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const maybeCompressResponse = (requestHeaders, statusCode, headers, body) => {
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if (statusCode === 204 || statusCode === 304) {
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return { headers, body: '' };
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}
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if (!isCompressibleContentType(headers['content-type'])) {
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return { headers, body };
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}
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const bodyBuffer = Buffer.from(body, 'utf8');
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if (bodyBuffer.byteLength < compressionThresholdBytes) {
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return { headers, body };
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}
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if (headers['content-encoding']) {
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return { headers, body };
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}
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const acceptEncodingHeader = Array.isArray(requestHeaders['accept-encoding'])
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? requestHeaders['accept-encoding'].join(',')
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: requestHeaders['accept-encoding'];
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const vary = headers.vary ? `${headers.vary}, Accept-Encoding` : 'Accept-Encoding';
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const withVary = {
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...headers,
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vary
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};
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if (supportsEncoding(acceptEncodingHeader, 'br')) {
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return {
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headers: {
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...withVary,
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'content-encoding': 'br'
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},
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body: brotliCompressSync(bodyBuffer, {
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params: {
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[constants.BROTLI_PARAM_QUALITY]: 5
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}
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})
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};
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}
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if (supportsEncoding(acceptEncodingHeader, 'gzip')) {
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return {
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headers: {
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...withVary,
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'content-encoding': 'gzip'
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},
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body: gzipSync(bodyBuffer, {
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level: 6
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})
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};
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}
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return { headers: withVary, body };
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};
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export const startServer = async (input) => {
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assertLoopbackHost(input.host);
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if (input.shouldIndex) {
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const url = new URL(request.url ?? '/', `http://${request.headers.host ?? input.host}`);
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route(request, url, input.vaultPath)
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.then((result) => {
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response.
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const encoded = maybeCompressResponse(request.headers, result.statusCode, result.headers, result.body);
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response.writeHead(result.statusCode, encoded.headers);
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response.end(encoded.body);
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})
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.catch((error) => {
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const message = error instanceof Error ? error.message : String(error);
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const statusCode = isHttpError(error) ? error.statusCode : 500;
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response.
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const fallback = maybeCompressResponse(request.headers, statusCode, { 'content-type': contentTypes['.json'] }, createJsonResponse({ error: message }));
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response.writeHead(statusCode, fallback.headers);
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response.end(fallback.body);
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});
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});
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await new Promise((resolve, reject) => {
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import { watch } from 'node:fs';
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import {
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import { indexVaultWithOptions } from './index-vault.js';
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3
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import { isBucketVaultPath, resolveVaultPath } from '../infrastructure/file-system-vault.js';
|
|
4
4
|
const shouldIgnore = (filename) => {
|
|
5
5
|
if (!filename) {
|
|
@@ -14,6 +14,27 @@ export const startVaultWatcher = (input) => {
|
|
|
14
14
|
const absoluteVaultPath = resolveVaultPath(input.vaultPath);
|
|
15
15
|
const debounceMs = input.debounceMs ?? 350;
|
|
16
16
|
let timeout = null;
|
|
17
|
+
let running = false;
|
|
18
|
+
let pending = false;
|
|
19
|
+
const runIndex = () => {
|
|
20
|
+
if (running) {
|
|
21
|
+
pending = true;
|
|
22
|
+
return;
|
|
23
|
+
}
|
|
24
|
+
running = true;
|
|
25
|
+
indexVaultWithOptions(absoluteVaultPath, {
|
|
26
|
+
onProgress: input.onProgress
|
|
27
|
+
})
|
|
28
|
+
.then(input.onIndex)
|
|
29
|
+
.catch(input.onError)
|
|
30
|
+
.finally(() => {
|
|
31
|
+
running = false;
|
|
32
|
+
if (pending) {
|
|
33
|
+
pending = false;
|
|
34
|
+
runIndex();
|
|
35
|
+
}
|
|
36
|
+
});
|
|
37
|
+
};
|
|
17
38
|
const schedule = (filename) => {
|
|
18
39
|
if (shouldIgnore(filename)) {
|
|
19
40
|
return;
|
|
@@ -22,7 +43,7 @@ export const startVaultWatcher = (input) => {
|
|
|
22
43
|
clearTimeout(timeout);
|
|
23
44
|
}
|
|
24
45
|
timeout = setTimeout(() => {
|
|
25
|
-
|
|
46
|
+
runIndex();
|
|
26
47
|
}, debounceMs);
|
|
27
48
|
};
|
|
28
49
|
const watcher = watch(absoluteVaultPath, { recursive: true }, (_eventType, filename) => {
|
|
@@ -21,7 +21,7 @@ const readOptions = (args) => ({
|
|
|
21
21
|
});
|
|
22
22
|
const topics = [
|
|
23
23
|
'authentication jwt token refresh policy',
|
|
24
|
-
'
|
|
24
|
+
'graph backlinks markdown vault indexing',
|
|
25
25
|
'frontend canvas layout graph interaction',
|
|
26
26
|
'agent memory context retrieval summarization',
|
|
27
27
|
'security local server vault path allowlist',
|