@andes/fhir 1.12.0-beta.4 → 1.12.1-beta.1

package/index.ts

@@ -1,30 +0,0 @@
-import * as AllergyIntolerance from './src/lib/allergyIntolerance';
-import * as Bundle from './src/lib/bundle';
-import * as Composition from './src/lib/composition';
-import * as Condition from './src/lib/condition';
-import * as Device from './src/lib/device';
-import * as DocumentReference from './src/lib/document-reference';
-import * as Immunization from './src/lib/immunization';
-import * as Medication from './src/lib/medication';
-import * as MedicationRequest from './src/lib/medicationRequest';
-import * as MedicationStatement from './src/lib/medicationStatement';
-import * as Organization from './src/lib/organization';
-import * as Patient from './src/lib/patient';
-import * as Practitioner from './src/lib/practitioner';
-
-export { getDominio, initialize } from './src/lib/config';
-export {
-    Patient,
-    Practitioner,
-    Organization,
-    Immunization,
-    Condition,
-    Composition,
-    Bundle,
-    DocumentReference,
-    Device,
-    Medication,
-    MedicationStatement,
-    MedicationRequest,
-    AllergyIntolerance
-};

package/jest.config.js

@@ -1,12 +0,0 @@
-module.exports = {
-    roots: ['./'],
-    transform: {
-        '^.+\\.tsx?$': 'ts-jest'
-    },
-    testRegex: '(/__tests__/.*|(\\.|/)(test|spec))\\.tsx?$',
-    moduleFileExtensions: ['ts', 'tsx', 'js', 'jsx', 'json', 'node'],
-    testEnvironment: 'node',
-    moduleNameMapper: {
-        '@andes/unit-test': '<rootDir>/packages/unit-testing/index.ts'
-    }
-}

package/release.config.js

@@ -1,74 +0,0 @@
-// release.config.js
-module.exports = {
-    branches: [
-        // 🔹 Rama principal: versión estable
-        { name: 'master' },
-
-        // 🔹 Rama de desarrollo: pre-release "beta"
-        { name: 'develop', channel: 'beta', prerelease: 'beta' }
-    ],
-
-    // Repositorio en GitHub
-    repositoryUrl: 'https://github.com/andes/fhir.git',
-
-    plugins: [
-        // 1️⃣ Analiza commits según Conv. Commits
-        [
-            '@semantic-release/commit-analyzer',
-            {
-                preset: 'conventionalcommits',
-                releaseRules: [
-                    { type: 'docs', scope: 'README', release: 'patch' },
-                    { type: 'refactor', release: 'patch' },
-                    { type: 'chore', release: false }
-                ],
-                parserOpts: {
-                noteKeywords: ['BREAKING CHANGE', 'BREAKING CHANGES']
-                }
-            }
-        ],
-
-        // 2️⃣ Genera notas de release automáticamente
-        '@semantic-release/release-notes-generator',
-
-        // 3️⃣ Actualiza el changelog solo en master
-        [
-            '@semantic-release/changelog',
-            {
-                changelogFile: 'CHANGELOG.md',
-                changelogTitle: '# Changelog'
-            }
-        ],
-
-        // 4️⃣ Publica el paquete en npm
-        [
-            '@semantic-release/npm',
-            {
-                npmPublish: true,
-                pkgRoot: '.'
-            }
-        ],
-
-        // 5️⃣ Actualiza package.json y changelog solo en master
-        [
-            '@semantic-release/git',
-            {
-                assets: ['package.json', 'CHANGELOG.md'],
-                message:
-                'chore(release): ${nextRelease.version} [skip ci]\n\n${nextRelease.notes}'
-            }
-        ],
-
-        // 6️⃣ Publica release en GitHub (tags, changelog, etc.)
-        [
-            '@semantic-release/github',
-            {
-                successComment: false,
-                failComment: false,
-                assets: [
-                { path: 'CHANGELOG.md', label: '📘 Changelog' }
-                ]
-            }
-        ]
-    ]
-};

package/src/helpers/patientFactory.ts

@@ -1,13 +0,0 @@
-import * as basePatient from '../data/patient.json';
-
-export type PartialDeep<T> = {
-    [K in keyof T]?: T[K] extends object ? PartialDeep<T[K]> : T[K];
-};
-
-export const createPatient = (overrides: PartialDeep<typeof basePatient> = {}) => {
-    const clone = JSON.parse(JSON.stringify(basePatient));
-    return {
-        ...clone,
-        ...overrides,
-    };
-};

package/src/lib/allergyIntolerance.ts

@@ -1,36 +0,0 @@
-/**
- * Encode de Alergias e Intolerancias from ANDES to FHIR
- * @param {} AllergyIntolerance
- */
-export function encode(patientReference, alergiaIntolerancia) {
-    return {
-        category: [
-            'medication'
-        ],
-        criticality: 'high',
-        patient: {
-            reference: patientReference
-        },
-        id: alergiaIntolerancia._id,
-        code: {
-            coding: [
-                {
-                    system: 'http://snomed.info/sct',
-                    display: alergiaIntolerancia.concepto.term,
-                    code: alergiaIntolerancia.concepto.conceptId,
-                }
-            ]
-        },
-        meta: {
-            profile: ['http://hl7.org/fhir/uv/ips/StructureDefinition/allergyintolerance-uv-ips']
-        },
-        text: {
-            status: 'generated',
-            div: `<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: Alergia </p><p><b>meta</b>: </p><p><b>text</b>: ${alergiaIntolerancia.concepto.semanticTag}</p></div>`
-        },
-        resourceType: 'AllergyIntolerance',
-        type: 'allergy',
-        onsetDateTime: alergiaIntolerancia.valor.fechaInicio
-    };
-}
-

package/src/lib/bundle.ts

@@ -1,19 +0,0 @@
-import moment from 'moment';
-import { makeUrl } from './config';
-
-export function encode(ID, resources) {
-    return {
-        resourceType: 'Bundle',
-        id: ID,
-        meta: {
-            lastUpdated: moment().format()
-        },
-        language: 'es-AR',
-        entry: resources,
-        type: 'document',
-        identifier: {
-            system: makeUrl('Bundle'),
-            value: ID
-        }
-    };
-}

package/src/lib/composition.ts

@@ -1,153 +0,0 @@
-
-import moment from 'moment';
-import { makeUrl } from './config';
-
-function getReference(url) {
-    return {
-        reference: url
-    };
-}
-
-export function encode(ID, patientReference, custodianReference, deviceReference, medicationStatementReference, ImmunizationReferences, AllergyIntoleranceReferences, ConditionReferences) {
-    const now = moment();
-    let Immunization: any = [];
-    let conditions: any = [];
-    let medications: any = [];
-    let allergyIntolerance = [];
-
-    Immunization = [{
-        title: 'Vacunas',
-        text: {
-            status: 'generated',
-            div: '<div xmlns="http:\/\/www.w3.org\/1999\/xhtml">Sección referida a la vacunación del paciente <\/div>'
-        },
-        code: {
-            coding: [
-                {
-                    system: 'http:\/\/loinc.org',
-                    display: 'Immunization record',
-                    code: '60484-3'
-                }
-            ]
-        },
-        entry: ImmunizationReferences ? ImmunizationReferences.map(getReference) : []
-    }];
-
-    medications = [{
-        title: 'Medicamentos',
-        text: {
-            status: 'generated',
-            div: '<div xmlns="http:\/\/www.w3.org\/1999\/xhtml">Registro de medicamentos<\/div>'
-        },
-        code: {
-            coding: [
-                {
-                    system: 'http:\/\/loinc.org',
-                    display: 'Medication use',
-                    code: '10160-0'
-                }
-            ]
-        },
-        entry: medicationStatementReference ? medicationStatementReference.map(getReference) : [],
-    }];
-
-    allergyIntolerance = [{
-        title: 'Alergias o Intolerancias',
-        text: {
-            status: 'generated',
-            div: '<div xmlns="http:\/\/www.w3.org\/1999\/xhtml">Registro de Alergias<\/div>'
-        },
-        code: {
-            coding: [
-                {
-                    system: 'http:\/\/loinc.org',
-                    display: 'Allergies and/or adverse reactions',
-                    code: '48765-2'
-                }
-            ]
-        },
-        entry: AllergyIntoleranceReferences ? AllergyIntoleranceReferences.map(getReference) : [],
-    }];
-
-    conditions = [{
-        code: {
-            coding: [
-                {
-                    system: 'http:\/\/loinc.org',
-                    display: 'Problem list',
-                    code: '11450-4'
-                }
-            ]
-        },
-        entry: ConditionReferences ? ConditionReferences.map(getReference) : [],
-        title: 'Problemas activos',
-        text: {
-            status: 'generated',
-            div: '<div xmlns="http:\/\/www.w3.org\/1999\/xhtml">Lista de problemas activos (trastornos)<\/div>'
-        }
-    }];
-
-    return {
-        id: ID,
-        subject: {
-            reference: patientReference
-        },
-        section: [
-            ...conditions,
-            ...medications,
-            ...Immunization,
-            ...allergyIntolerance
-
-        ],
-        resourceType: 'Composition',
-        author: [
-            {
-                identifier: {
-                    system: 'https://federador.msal.gob.ar/uri',
-                    value: deviceReference
-                }
-            }
-        ],
-        confidentiality: 'N',
-        type: {
-            coding: [
-                {
-                    system: 'http:\/\/loinc.org',
-                    display: 'Patient Summary',
-                    code: '60591-5'
-                }
-            ]
-        },
-        title: 'Resumen del paciente al ' + now.format('DD/MM/YYYY, HH:mm'),
-        identifier: {
-            system: makeUrl('Composition'),
-            value: ID
-        },
-        date: now,
-        // meta: {
-        //     profile: [
-        //         'http:\/\/hl7.org\/fhir\/uv\/ips\/StructureDefinition\/composition-uv-ips'
-        //     ]
-        // },
-        text: {
-            status: 'generated',
-            div: '<div xmlns=\"http://www.w3.org/1999/xhtml\">IPS Neuquen</div>'
-        },
-        custodian: {
-            identifier: {
-                system: 'https://federador.msal.gob.ar/uri',
-                value: custodianReference
-            }
-        },
-        attester: [
-            {
-                mode: 'legal',
-                time: now,
-                party: {
-                    reference: custodianReference
-                }
-            }
-        ],
-        status: 'final'
-    };
-}

package/src/lib/condition.ts

@@ -1,80 +0,0 @@
-import { makeUrl } from './config';
-
-/**
- *
- * @param registro Registro RUP a transformar a FHIR
- */
-
-
-export function encode(patientReference, registro) {
-    return {
-        id : registro._id,
-        category : [
-            {
-                coding : [
-                    {
-                        system : 'http://loinc.org',
-                        display : 'Problem',
-                        code : '75326-9'
-                    }
-                ]
-            }
-        ],
-        subject : {
-            reference : patientReference
-        },
-        onsetDateTime : registro.createdAt.getFullYear(), // [TODO] No va solo el año
-        resourceType : 'Condition',
-        // Por el momento ponemos 'confirmed'
-        verificationStatus : {
-            coding : [
-                {
-                    system : 'http://terminology.hl7.org//CodeSystem//condition-ver-status',
-                    code : 'confirmed'
-                }
-            ]
-        },
-        code : {
-            coding : [
-                {
-                    code : registro.concepto.conceptId,
-                    system : 'http://snomed.info/sct',
-                    display : registro.concepto.fsn
-                }
-            ]
-        },
-        recordedDate : registro.createdAt,
-        meta : {
-            profile : [
-                'http://hl7.org/fhir/uv/ips/StructureDefinition/condition-uv-ips'
-            ]
-        },
-        text : {
-            status : 'generated',
-            div: `<div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative with Details</b></p><p><b>id</b>: Problema: </p><p>${registro.nombre}</p></div>`
-        },
-        severity : {  // [TODO] Sacar esto porque no lo tenemos todavía. No hay un campo de severidad.
-            coding : [
-                {
-                    system : 'http://loinc.org',
-                    display : 'Moderate',
-                    code : 'LA6751-7'
-                }
-            ]
-        },
-        clinicalStatus : {
-            coding : [
-                {
-                    system: 'http://terminology.hl7.org/CodeSystem/condition-clinical',
-                    code: registro.valor.estado // [TODO]  Tenemos este dato.
-                },
-                {
-                    system: 'http://terminology.hl7.org/CodeSystem/evolution',
-                    // code: registro.valor.evolucion.replace('<p>','').replace('</p>','')  // [TODO]  Tenemos este dato.
-                    code: registro.valor.evolucion  // [TODO]  Tenemos este dato.
-                }
-            ]
-        }
-    };
-}
-

package/src/lib/config.test.ts

@@ -1,13 +0,0 @@
-import { getDominio, makeUrl } from './config';
-
-test('Get default domain', () => {
-    expect(getDominio()).toBe('andes.gob.ar');
-});
-
-test('Get default URL without id', () => {
-    expect(makeUrl('patient')).toBe('andes.gob.ar/patient');
-});
-
-test('Get default URL with id', () => {
-    expect(makeUrl('patient', '123456')).toBe('andes.gob.ar/patient/123456');
-});

package/src/lib/config.ts

@@ -1,17 +0,0 @@
-let DOMINIO = 'andes.gob.ar';
-
-export function initialize({ dominio }) {
-    DOMINIO = dominio;
-}
-
-export function getDominio() {
-    return DOMINIO;
-}
-
-export function makeUrl(resource, id = null) {
-    let url = `${DOMINIO}/${resource}`;
-    if (id) {
-        url += `/${id}`;
-    }
-    return url;
-}

package/src/lib/device.test.ts

@@ -1,9 +0,0 @@
-import { encode } from './device';
-
-test('Device type 1', () => {
-    expect(encode().id).toBe('device-01');
-});
-
-test('Device Name', () => {
-    expect(encode().deviceName[0].name).toBe('Sistema de Aplicaciones Neuquinas de Salud (ANDES)');
-});

package/src/lib/device.ts

@@ -1,36 +0,0 @@
-import { makeUrl } from './config';
-
-export function encode() {
-    /**
- * HARDCODE DEVICE
- */
-
-    return {
-        resourceType: 'Device',
-        id: 'device-01',
-        identifier: [
-            {
-                system: makeUrl('Device'),
-                value: 'device-01'
-            }
-        ],
-        type: {
-            coding: [
-                {
-                    system: 'http://snomed.info/sct',
-                    code: '462894001',
-                    display: 'software de aplicación de sistema de información de historias clínicas de pacientes (objeto físico)'
-                }
-            ]
-        },
-        owner: {
-            reference: 'http://argentina.gob.ar/salud/refes/14999912399913'
-        },
-        deviceName: [
-            {
-                name: 'Sistema de Aplicaciones Neuquinas de Salud (ANDES)',
-                type: 'manufacturer-name'
-            }
-        ]
-    };
-}

package/src/lib/document-reference.ts

@@ -1,102 +0,0 @@
-import moment from 'moment';
-import { makeUrl } from './config';
-
-export function encode(ID, author, organization, patient, binaryURL) {
-    return {
-        resourceType: 'DocumentReference',
-        id: ID,
-        meta: {
-            lastUpdated: moment().format()
-        },
-        contained: [
-            {
-                resourceType: 'Practitioner',
-                id: author.id,
-                identifier: [{
-                    system: makeUrl('Device'),
-                    value: author.id
-                }]
-            },
-            {
-                resourceType: 'Organization',
-                id: organization.id,
-                identifier: [{
-                    system: makeUrl('Organization'),
-                    value: organization.id
-                }]
-            }
-        ],
-        custodian: {
-            identifier: {
-                system: 'https://federador.msal.gob.ar/uri',
-                value: makeUrl('Organization', organization.id)
-            }
-        },
-        masterIdentifier: {
-            system: makeUrl('documentos_versiones'),
-            value: ID
-        },
-        identifier: [{
-            system: makeUrl('documentos'),
-            value: ID
-        }],
-        status: 'current',
-        type: {
-            coding: [
-                {
-                    system: 'http://loinc.org',
-                    code: '60591-5'
-                }
-            ]
-        },
-        subject: {
-            reference: makeUrl('Patient', patient.id),
-        },
-        // author: [
-        //     {
-        //         reference: makeUrl('Device', author.id),
-        //     },
-        //     {
-        //         reference: makeUrl('Organization', organization.id),
-        //     }
-        // ],
-        securityLabel: [{
-            coding: [{
-                system: 'https://saludddigital.gob.ar/nivelesconfidencialidad',
-                code: 'N'
-            }]
-        }],
-        content: [{
-            attachment: {
-                id: 'PRINCIPAL',
-                url: binaryURL
-            }
-        }],
-        context: {
-            event: [{
-                coding: [{
-                    system: 'https://saludddigital.gob.ar/tiposevento',
-                    code: 'CIR'
-                }]
-            }],
-            // period: {
-            //     start: '2019-04-03T10:30:00+03:00',
-            //     end: '2019-04-05T10:30:00+03:00'
-
-            // },
-            facilityType: {
-                coding: [{
-                    system: 'https://saludddigital.gob.ar/tipoprestador',
-                    code: 'INI'
-                }]
-            },
-            practiceSetting: {
-                coding: [{
-                    system: 'https://saludddigital.gob.ar/especialidades',
-                    code: 'CLM'
-                }]
-            }
-        }
-
-    };
-}

package/src/lib/immunization.ts

@@ -1,64 +0,0 @@
-
-/**
- * Encode de Vacunas Nomivac from ANDES to FHIR
- * @param {} nomivac
- * [ASK] El code de extension puede ir en vaccineCode?
- * [ASk] Location no se sabe. Solo esta el texto
- */
-export function encode(patientReference, nomivac) {
-    return {
-        resourceType: 'Immunization',
-        id: nomivac.idvacuna,
-        extension: [
-            {
-                url: 'http://sisa/fhir/esquema',
-                valueCoding: {
-                    system: 'http://argentina.gob.ar/salud/NOMIVAC-esquemas',
-                    code: '0', // [TODO] Ver que code ponemos acá
-                    display: nomivac.vacuna
-                }
-            },
-            {
-                url: 'http://sisa/fhir/condicionAplicacion',
-                valueCoding: {
-                    system: 'http://argentina.gob.ar/salud/NOMIVAC-condicion',
-                    code: '17',
-                    display: 'Personal de Salud'
-                }
-            }
-        ],
-        status: 'completed',
-        notGiven: false,
-        vaccineCode: {
-            coding: [
-                {
-                    system: 'https://snomed.info/sct/11000221109/id/228100022110',
-                    code: nomivac.idvacuna,
-                    display: nomivac.vacuna
-                }
-            ]
-        },
-        patient: {
-            reference: patientReference
-        },
-        date: nomivac.fechaAplicacion,
-        primarySource: false,
-        location: {
-            reference: 'http://argentina.gob.ar/salud/refes/14999912399913'
-        },
-        // lotNumber: null,
-        vaccinationProtocol: [
-            {
-                doseSequence: 1,
-                doseStatus: {
-                    coding: [
-                        {
-                            system: 'http://hl7.org/fhir/vaccination-protocol-dose-status',
-                            code: nomivac.dosis
-                        }
-                    ]
-                }
-            }
-        ]
-    };
-}