@amsterdamdatalabs/adl-agent-control-darwin-arm64 0.1.4

package/packages/agent-skills/assets/to-workitems/references/AZURE-DEVOPS-HIERARCHY.md

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+# How Azure DevOps organises Epic, Feature, PBI, Bug
+
+From the official docs, not inference:
+- [About work items and work item types](https://learn.microsoft.com/en-us/azure/devops/boards/work-items/about-work-items?view=azure-devops)
+- [Organize your product backlog](https://learn.microsoft.com/en-us/azure/devops/boards/backlogs/organize-backlog?view=azure-devops)
+
+## The hierarchy is four levels, by category
+
+| Category | Type (Scrum process) | Appears on |
+| --- | --- | --- |
+| Epic | `Epic` | Epic portfolio backlog |
+| Feature | `Feature` | Feature portfolio backlog |
+| Requirement | `Product Backlog Item` | Product backlog and Sprints backlog |
+| Task | `Task` | Sprint backlog and Taskboard |
+| Bug | `Bug` | **depends on a team setting** — see Rule 3 |
+
+> "Epics group Features, Features group Requirements (User Stories, Product
+> Backlog Items, Issues, or Requirements), and Requirements group Tasks."
+
+## Rule 1 — parenting is restricted to adjacent levels
+
+> "You can only reparent backlog items under other features, and features under
+> other epics."
+
+So `parentId` for a Product Backlog Item **or a Bug** is always a Feature,
+never an Epic. Creating either with an Epic's id as `parentId` is refused
+before the request is sent, naming the mismatch:
+
+```
+must be parented to a Feature; work item 320 is a Epic
+```
+
+Reaching the Epic is the Feature's job. In a plan, `feature:` is the parent
+link and `epic:` is a cross-check on that Feature's own parent — read the
+Feature once (`workitem_list_or_get({ id: feature, raw: true })`) and compare
+`links.parent` to `epic:`; there is no need for a second call that fetches the
+Epic directly.
+
+**Every tracked type requires a parent — there is no root case.** Omitting
+`parentId` on a Feature, a Product Backlog Item, or a Bug is refused as
+`requires parentId`, whatever the type.
+
+## Rule 2 — one parent per work item
+
+Parent-child is single-valued. Ordering and blocking therefore **cannot** be
+expressed by parenting; they need `System.LinkTypes.Dependency-Reverse` links,
+which `workitem_create_or_update`'s `predecessors` argument creates — one link
+per id, in the order given.
+
+`predecessors` is the only argument that creates them. It has no alias at the
+tool level: `blockedBy` is not read.
+
+The complete set of link kinds this server will write is `parent`,
+`predecessors`, `related` — nothing else, including `children` and
+`successors`, which the board derives from the other end of `parent` and
+`predecessors` and so are never a second way to say the same thing.
+
+## Rule 3 — a Bug parents to the Feature, the same as a Product Backlog Item
+
+Creating a Bug with the plan's Feature as `parentId` succeeds. A Bug can also
+carry `related: [<id>]` to record which item it was found while building,
+alongside its `System.LinkTypes.Hierarchy-Reverse` parent link.
+
+## Rule 4 — states are exact, and per work item type
+
+Product Backlog Item and Bug share one state list, in board order:
+
+| State | Category |
+| --- | --- |
+| New | Proposed |
+| Approved | Proposed |
+| Committed | InProgress |
+| In Progress | InProgress |
+| In Testing | InProgress |
+| Done | Completed |
+| Removed | Removed |
+
+This list was read from the board, not transcribed from generic Scrum
+documentation — treat it as exhaustive. A state outside this list is not a
+looser spelling of one of these; it is wrong. `Removed` hides the item from
+the backlog and is otherwise unconstrained. What each state requires of the
+six Build flags is out of scope here — to-workitems never sets a flag or
+changes state (see [`../SKILL.md`](../SKILL.md), Step 6); that belongs to
+whichever skill runs that pass. Read `System.State` verbatim — never infer a
+local status from a remote string.
+
+## What can be created, and what can only be a parent
+
+Creating a work item is restricted to `Feature`, `Product Backlog Item`,
+`Bug`. Both `Epic` and `Task` are refused with the same message:
+
+```
+type must be one of ...
+```
+
+Epic is still a **valid parent** — a Feature's own `parentId` — it simply
+cannot be the type of a new work item.
+
+**The parent-type rule covers all three creatable types**, Feature included:
+
+```js
+PARENT_TYPE_REQUIREMENT = { Feature: "Epic", "Product Backlog Item": "Feature", Bug: "Feature" }
+```
+
+So a Feature parented to anything but an Epic is refused by name, on create and
+on update alike — `Feature must be parented to a Epic; work item <id> is a
+<type>`. The check reads the parent through the raw work-item endpoint rather
+than the tracked-type tool, which is how it can inspect an Epic that
+`workitem_list_or_get` refuses to return.
+
+What the server still cannot check is **which** Epic. A Feature parented to the
+wrong Epic is the right type and creates cleanly, so an unset or mistyped
+`epic:` is caught by type but never by intent — that part stays on the agent,
+and on the human it asks. See [`../SKILL.md`](../SKILL.md)'s "Do Not Use When".
+
+`Task` stays out for a design reason, not just a server one: an Execution row
+is already sized to one item, and a fourth level would need a second place to
+record progress, which is the duplication this design exists to avoid.

package/packages/agent-skills/assets/to-workitems/references/TICKET-TEMPLATES.md

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+# Backlog item body
+
+## The work item's `description`
+
+Sent on the create call for every PBI and Bug. It carries what the row delivers and where that
+row came from:
+
+```markdown
+## What it delivers
+
+The end-to-end behaviour this makes work. Not a layer-by-layer list.
+
+## Source
+
+Plan: the Feature's `spec.md`, `## Items` row <n>.
+```
+
+## The work item's `acceptanceCriteria`
+
+The row's `Verification` cell, verbatim: a falsifiable check with its expected result, not
+"tested". Send it as `acceptanceCriteria` on the same create call as `description`.
+
+## The item file
+
+Written after the create call returns, because the file is named `az<work item id>-<slug>.md`
+and **the id is the identity** — allocate the work item first, then write the file. Where the
+repo carries `plans/templates/backlog-item.md`, author from that file; this is only its shape.
+
+```markdown
+---
+type: Backlog Item
+title: "[what it delivers]"
+description: "[one line]"
+status: draft
+created: YYYY-MM-DD
+item_type: pbi
+feature: az<feature work item id>
+work_item: <id>
+---
+
+# [what it delivers]
+
+## What it delivers
+
+## Verification
+
+## Predecessors
+
+Item files that must finish first, by filename — or "None". These become Predecessor links on
+the board.
+
+## Related
+
+For a Bug: the item file of the PBI it was found in. A Bug's parent is the Feature, so Related
+is the only way to record where it came from.
+```
+
+`item_type: pbi` maps to `Product Backlog Item` and `bug` to `Bug`. `status: draft` describes
+the document, never the work — the work's state is the board's, and an item file that also
+claimed it would be a second place to update and the one that goes stale.
+
+## What does not go in either
+
+Do not restate the six Build flags. They live on the work item's fields, not in prose anyone
+has to keep in sync by hand. to-workitems never sets a flag or changes state (see
+[`../SKILL.md`](../SKILL.md), Step 6): the reference names, what each state requires of them,
+who must set one independently of whom, the failure-reason table, and the revision fence all
+belong to whichever skill runs that later pass, not to this file. They are removed from here
+for that reason, not merely trimmed for length — re-author them where that skill lives; do not
+restore them to this file.

package/packages/agent-skills/assets/wayfinder/SKILL.md

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+---
+name: wayfinder
+description: Plan a huge chunk of work — more than one agent session can hold — as a shared map of decision tickets on your issue tracker, and resolve them one at a time until the way to the destination is clear.
+disable-model-invocation: true
+---
+
+# Wayfinder
+A loose idea has arrived — too big for one agent session, and wrapped in fog: the way from here to the **destination** isn't visible yet. Wayfinding is about finding that way, not charging at the destination. This skill charts the way as a **shared map** on the repo's issue tracker, then works its **decision tickets** — questions whose resolution is a decision, not slices of a build to execute — one at a time until the route is clear.
+
+The destination varies per effort, and naming it is the first act of charting — it shapes every ticket. It might be a spec to hand off and iterate on, a decision to lock before planning starts, or a change made in place like a data-structure migration. The map is domain-agnostic — engineering work, course content, whatever fits the shape.
+
+## Use When
+
+- A loose idea is too big for one agent session and the way to its destination isn't visible yet — chart it as a shared map of decision tickets before executing.
+
+## Do Not Use When
+
+- The work is already small enough for one session, or is execution-shaped (slicing an already-decided plan into build tickets) rather than decision-shaped — use `to-workitems` instead.
+
+## Plan, don't do
+
+Wayfinder is **planning** by default: each ticket resolves a decision, and the map is done when the way is clear — nothing left to decide before someone goes and does the thing. The pull to just do the work is usually the signal you've reached the edge of the map and it's time to hand off. An effort can override this in its **Notes** — carrying execution into the map itself — but absent that, produce decisions, not deliverables.
+
+## Refer by name
+
+Every map and ticket is an issue, so it has a **name** — its title. In everything the human reads — narration, the map's Decisions-so-far — refer to it by that name, never by a bare id, number, or slug. A wall of `#42, #43, #44` is illegible; names read at a glance. The id and URL don't vanish — a name wraps its link — but they ride *inside* the name, never stand in for it.
+
+## The Map
+
+The map is a single issue on this repo's issue tracker, labelled `wayfinder:map` — the canonical artifact. Its tickets are child issues of the map.
+
+The map is an **index**, not a store. It lists the decisions made and points at the tickets that hold their detail; a decision lives in exactly one place — its ticket — so the map never restates it, only gists it and links.
+
+**Where the map, its child tickets, blocking, and frontier queries physically live is tracker-specific.** The issue tracker should have been provided to you — run `/setup-matt-pocock-skills` if not. Consult the tracker doc's "Wayfinding operations" section for how _this_ repo expresses them. If no tracker has been provided, default to the local-markdown tracker.
+
+### The map body
+
+The whole map at low resolution, loaded once per session. Open tickets are **not** listed — they are open child issues, found by query. See [references/TEMPLATES.md](references/TEMPLATES.md) for the map body template (Destination, Notes, Decisions so far, Not yet specified, Out of scope).
+
+### Tickets
+
+Each ticket is a **child issue** of the map; the tracker's issue id is its identity. Its body is the question, sized to one 100K token agent session — see [references/TEMPLATES.md](references/TEMPLATES.md) for the ticket body template.
+
+Each ticket carries a `wayfinder:<type>` label — one of `research`, `prototype`, `grilling`, `task` (see [Ticket Types](#ticket-types)).
+
+A session **claims** a ticket by assigning it to the dev driving the map, **first**, before any work, so concurrent sessions skip it. That assignee _is_ the claim: an open, unassigned ticket is unclaimed.
+
+Blocking uses the tracker's **native** dependency relationship — essential because it renders the frontier _visually_ in the tracker's own UI, so the human sees what's takeable without opening the map. Only a tracker that lacks native blocking falls back to a body convention. A ticket is **unblocked** when every ticket blocking it is closed; the **frontier** is the open, unblocked, unclaimed children — the edge of the known. The answer isn't part of the body — it's recorded on resolution (see [Work through the map](#work-through-the-map)). Assets created while resolving a ticket are linked from the issue, not pasted in.
+
+## Ticket Types
+
+Every ticket is either **HITL** — human in the loop, worked *with* a human who speaks for themselves — or **AFK**, driven by the agent alone. A HITL ticket only resolves through that live exchange; the agent never stands in for the human's side of it. See [references/TICKET-TYPES.md](references/TICKET-TYPES.md) for the four types (research, prototype, grilling, task) and when to use each.
+
+## Fog of war
+
+The map is _deliberately_ incomplete: don't chart what you can't yet see. Beyond the live tickets lies the **fog of war** — the dim view of decisions and investigations you can tell are coming but can't yet pin down, because they hang on questions still open. Resolving a ticket clears the fog ahead of it, graduating whatever's now specifiable into fresh tickets — one at a time, until the way to the destination is clear and no tickets remain.
+
+The map's **Not yet specified** section is where that dim view is written down: the suspected question, the area to revisit later. It's the undiscovered frontier _toward_ the destination — everything here is in scope, just not sharp enough to ticket. Write as loosely or as fully as the view allows; it doubles as a signpost for collaborators reading where the effort is headed.
+
+**Fog or ticket?** The test is whether you can state the question precisely now — _not_ whether you can answer it now.
+
+- **Ticket when** the question is already sharp — even if it's blocked and you can't act on it yet.
+- **Not yet specified when** you can't yet phrase it that sharply. Don't pre-slice the fog into ticket-sized pieces: it's coarser than a ticket, and one patch may graduate into several tickets, or none, once the frontier reaches it.
+
+**Not yet specified** excludes what's already decided (Decisions so far), what's already a live ticket, and what's out of scope (the next section).
+
+## Out of scope
+
+Fog only ever gathers _toward_ the destination. The destination fixes the scope, so work beyond it is **out of scope** — it isn't fog, and it doesn't belong in **Not yet specified**. It gets its own **Out of scope** section on the map: work you've consciously ruled out of _this_ effort. Scope, not sharpness, lands it here.
+
+Out-of-scope work never graduates — the frontier stops at the destination — so it returns only if the destination is redrawn, and then as a fresh effort, not a resumption.
+
+Ruling something out of scope is a scoping act, not a step on the route. When a ticket that already exists turns out to sit past the destination — mis-scoped in while charting, or exposed by a resolution — **close it** (a closed ticket is unambiguously off the frontier) and leave one line in the **Out of scope** section: the gist plus why it's out of scope, linking the closed ticket. It stays out of **Decisions so far**, which records the route actually walked — a scope boundary isn't a step on it.
+
+## Invocation
+
+Two modes. Either way, **never resolve more than one ticket per session** — with the exception of research tickets.
+
+### Chart the map
+
+User invokes with a loose idea.
+
+1. **Name the destination.** Run a `/grilling` and `/domain-modeling` session to pin down what this map is finding its way to — the spec, decision, or change. The destination fixes the scope, so it's settled first.
+2. **Map the frontier.** Grill again, **breadth-first** this time: fan out across the whole space rather than deep on any one thread, surfacing the open decisions and the first steps takeable now. **If this surfaces no fog** — the way to the destination is already clear, the whole journey small enough for one session — you don't need a map. Stop and ask the user how they'd like to proceed.
+3. **Create the map** (label `wayfinder:map`): Destination and Notes filled in, Decisions-so-far empty, the fog sketched into **Not yet specified**.
+4. **Create the tickets you can specify now** as child issues of the map — then wire blocking edges in a **second pass** (issues need ids before they can reference each other). Wiring sorts them into the frontier and the blocked; everything you can't yet specify stays in the fog — the **Not yet specified** section.
+5. **Fire the research subagents.** For each `research` ticket you just created, spin up a `/research` subagent to resolve it in parallel, capturing its findings on a throwaway `research/<name>` branch with a context pointer from the ticket.
+6. Stop — charting is one session's work; it hand-resolves nothing.
+
+### Work through the map
+
+User invokes with a map (URL or number). A ticket is **optional** — without one, you pick the next decision, not the user.
+
+1. Load the **map** — the low-res view, not every ticket body.
+2. Choose the ticket. If the user named one, use it. Otherwise take the first frontier ticket in order. **Claim it**: assign it to yourself before any work.
+3. Resolve it — **zoom as needed**: fetch the full body of any related or closed ticket on demand; invoke the skills the `## Notes` block names. If in doubt, use `/grilling` and `/domain-modeling`.
+4. Record the resolution: post the answer as a **resolution comment**, **close** the issue, and **append a context pointer** to the map's Decisions-so-far.
+5. Add newly-surfaced tickets (create-then-wire); graduate any fog the answer has made specifiable, clearing each graduated patch from **Not yet specified** so it lives only as its new ticket. If the answer reveals a ticket — this one or another — sits beyond the destination, **rule it out of scope** rather than resolving it on the route. If the decision invalidates other parts of the map, update or delete those tickets.
+
+The user may run unblocked tickets in parallel, so expect other sessions to be editing the tracker concurrently.

package/packages/agent-skills/assets/wayfinder/references/TEMPLATES.md

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+# Wayfinder Templates
+
+## Map body
+
+```markdown
+## Destination
+
+<what reaching the end of this map looks like — the spec, decision, or change this effort is finding its way to. One or two lines; every session orients to it before choosing a ticket.>
+
+## Notes
+
+<domain; skills every session should consult; standing preferences for this effort>
+
+## Decisions so far
+
+<!-- the index — one line per closed ticket: enough to judge relevance, then zoom the link for the detail the ticket holds -->
+
+- [<closed ticket title>](link) — <one-line gist of the answer>
+
+## Not yet specified
+
+<!-- see "Fog of war": in-scope fog you can't ticket yet; graduates as the frontier advances -->
+
+## Out of scope
+
+<!-- see "Out of scope": work ruled beyond the destination; closed, never graduates -->
+```
+
+## Ticket body
+
+```markdown
+## Question
+
+<the decision or investigation this ticket resolves>
+```

package/packages/agent-skills/assets/wayfinder/references/TICKET-TYPES.md

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+# Ticket Types
+
+Every ticket is either **HITL** — human in the loop, worked *with* a human who speaks for themselves — or **AFK**, driven by the agent alone. A HITL ticket only resolves through that live exchange; the agent never stands in for the human's side of it (a grilling agent that answers its own questions has broken this).
+
+- **Research** (AFK): Reading documentation, third-party APIs, or local resources like knowledge bases to surface a fact a decision waits on. Resolved by a `/research` **subagent**. Use when knowledge outside the current working directory is required.
+- **Prototype** (HITL): Raise the fidelity of the discussion by making a cheap, rough, concrete artifact to react to — an outline, a rough take, a stub, or UI/logic code via the /prototype skill. Links the prototype as an asset. Use when "how should it look" or "how should it behave" is the key question.
+- **Grilling** (HITL): Conversation via the /grilling and /domain-modeling skills, one question at a time. The default case.
+- **Task** (HITL or AFK): Manual work that must happen before a *decision* can be made — nothing to decide, prototype, or research, but the discussion is blocked until it's done. Signing up for a service so its API can be judged, provisioning access, moving data so its shape can be seen. This is the one type that *does* rather than decides — and it earns its place by unblocking a decision, not by delivering the destination. The agent drives it alone where it can (AFK); otherwise it hands the human a precise checklist (HITL). Resolved when the work is done; the answer records what was done and any resulting facts (credentials location, new URLs, row counts) later tickets depend on.

package/packages/agent-skills/deploy-profile.json

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+{
+  "$schema": "./deploy-profile.schema.json",
+  "surfaces": [
+    { "name": "agents", "folder": ".agents/skills" },
+    { "name": "claude", "folder": ".claude/skills" }
+  ],
+  "retired": [".cursor/skills", ".kimi-code/skills", ".opencode/skills"],
+  "legacyLock": ".agents/adl-repo.lock.json"
+}

package/packages/agent-skills/deploy-profile.schema.json

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+{
+  "$schema": "http://json-schema.org/draft-07/schema#",
+  "title": "agent-skills deploy profile",
+  "description": "Declares which on-disk folder each agent surface reads its skills from. deploy.ts writes every skill under assets/<skill>/ into <target repo>/<surface.folder>/<skill>/, for every surface listed here.",
+  "type": "object",
+  "required": ["surfaces"],
+  "additionalProperties": false,
+  "properties": {
+    "$schema": { "type": "string" },
+    "surfaces": {
+      "type": "array",
+      "minItems": 1,
+      "items": {
+        "type": "object",
+        "required": ["name", "folder"],
+        "additionalProperties": false,
+        "properties": {
+          "name": {
+            "type": "string",
+            "minLength": 1,
+            "description": "Short surface identifier, e.g. codex, claude, cursor, kimi, opencode."
+          },
+          "folder": {
+            "type": "string",
+            "pattern": "^\\.[A-Za-z0-9_.-]+/skills$",
+            "description": "Repo-relative folder this surface reads skills from, e.g. .claude/skills."
+          }
+        }
+      }
+    },
+    "retired": {
+      "type": "array",
+      "description": "Repo-relative skill folders no surface reads any more. deploy removes a skill folder here only if its name is a skill under assets/; every other entry is left byte-for-byte, and the folder itself is removed only once deploy has emptied it. doctor fails while a managed skill is still present in one.",
+      "items": {
+        "type": "string",
+        "pattern": "^\\.[A-Za-z0-9_.-]+/skills$"
+      }
+    },
+    "legacyLock": {
+      "type": "string",
+      "minLength": 1,
+      "description": "Repo-relative path to the OLD repo-controls engine's per-repo lock (lockVersion 2), used for a one-time takeover of skill folders it wrote before this package's own manifest existed, e.g. .agents/adl-repo.lock.json. Optional — absent means no legacy lock is considered."
+    }
+  }
+}

package/packages/agent-skills/dist/deploy.d.ts

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+import { type DeployProfile } from "./profile.js";
+export interface DeploySkillsOptions {
+    readonly assetsDir: string;
+    readonly targetRepo: string;
+    /** Defaults to loadProfile() (the package's own deploy-profile.json) — pass explicitly when the caller has already resolved real on-disk paths (see profile.ts's header). */
+    readonly profile?: DeployProfile;
+}
+export interface SkillConflict {
+    readonly folder: string;
+    readonly skill: string;
+    readonly reason: string;
+}
+export interface DeploySkillsResult {
+    readonly written: readonly string[];
+    readonly unchanged: readonly string[];
+    readonly removed: readonly string[];
+    readonly conflicts: readonly SkillConflict[];
+    readonly manifestPath: string;
+    /**
+     * Every path removed from a `profile.retired` folder this run: one entry
+     * per managed-name skill folder removed, plus the retired folder itself
+     * when cleanup left it empty. `[]` when nothing needed cleaning up.
+     */
+    readonly retiredRemovals: readonly string[];
+}
+export declare function deploySkills(options: DeploySkillsOptions): DeploySkillsResult;
+//# sourceMappingURL=deploy.d.ts.map

package/packages/agent-skills/dist/deploy.d.ts.map

@@ -0,0 +1 @@
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package/packages/agent-skills/dist/deploy.js

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+/**
+ * Writes every skill under assets/ into a target repository's skill
+ * folders, per the deploy profile (profile.ts) and the repo's own subset
+ * (skill-config.ts). Never touches a file it did not itself write, per the
+ * manifest (manifest.ts): a same-name skill the target repo already owns
+ * is left untouched and reported as a conflict, and a skill dropped from
+ * assets/ or the subset is removed only when the manifest shows this
+ * deploy wrote it.
+ *
+ * Also cleans up `profile.retired` folders — old per-surface copies no
+ * surface reads any more. There, a skill folder is removed only when its
+ * NAME is a skill under assets/ (regardless of the repo's own subset —
+ * this is retirement cleanup, not a deploy target); every other entry is
+ * left byte-for-byte, since it was never this package's to manage. A
+ * retired folder itself is removed once cleanup empties it.
+ *
+ * When `profile.legacyLock` names a lock the OLD repo-controls engine
+ * left behind, a same-name folder it fully wrote (per legacy-lock.ts) is
+ * taken over on sight rather than reported as a conflict — see
+ * legacy-lock.ts for the exact ownership rule and lock rewrite.
+ *
+ * Fails loud: assets/target validation, an invalid deploy profile, an
+ * invalid adl-config.toml subset, or an unwritable target all throw. There
+ * is no partial-success return value — either this returns a result, or it
+ * threw and nothing should be read as success.
+ */
+import { existsSync, mkdirSync, readdirSync, readFileSync, rmdirSync, statSync, unlinkSync, writeFileSync } from "node:fs";
+import { dirname, join } from "node:path";
+import { directoryNames, removeDirRecursive, walkFiles } from "./fs-utils.js";
+import { checkLegacyOwnership, readLegacyLock, stripTakenOverEntries } from "./legacy-lock.js";
+import { manifestPathFor, readManifest, writeManifest } from "./manifest.js";
+import { loadProfile, retiredFolders } from "./profile.js";
+import { resolveSkillSelection } from "./skill-config.js";
+import { listSourceSkillNames } from "./skill-meta.js";
+function removeEmptyParents(root, dir) {
+    let current = dir;
+    while (current !== root && current.startsWith(root)) {
+        if (!existsSync(current)) {
+            current = dirname(current);
+            continue;
+        }
+        if (readdirSync(current).length > 0)
+            return;
+        rmdirSync(current);
+        current = dirname(current);
+    }
+}
+export function deploySkills(options) {
+    const { assetsDir, targetRepo } = options;
+    if (!existsSync(assetsDir) || !statSync(assetsDir).isDirectory()) {
+        throw new Error(`agent-skills assets directory not found: ${assetsDir}`);
+    }
+    if (!existsSync(targetRepo) || !statSync(targetRepo).isDirectory()) {
+        throw new Error(`deploy target is not a directory: ${targetRepo}`);
+    }
+    const profile = options.profile ?? loadProfile();
+    const availableSkills = listSourceSkillNames(assetsDir);
+    if (availableSkills.length === 0)
+        throw new Error(`agent-skills assets directory has no skills: ${assetsDir}`);
+    const selection = resolveSkillSelection(targetRepo, availableSkills);
+    if (!selection.ok)
+        throw new Error(selection.error);
+    const selectedSkills = [...new Set(selection.skills)].sort();
+    const manifest = readManifest(targetRepo);
+    const legacyLock = readLegacyLock(targetRepo, profile.legacyLock);
+    // One-time takeover: a skill folder the OLD engine wrote (per legacyLock,
+    // every on-disk file listed with a matching hash, no unlisted extra
+    // file) is folded into this run's effective manifest before the deploy
+    // proper runs, so it is treated exactly like a folder we already own —
+    // updated if it differs from assets/, removed if it drops out of the
+    // current asset set/subset. A folder legacyLock knows about but that
+    // fails the check (hand-modified, or an unlisted extra file) stays a
+    // conflict, with a reason naming what disqualified it.
+    const takeoverFiles = new Set();
+    const takeoverConflictReasons = new Map();
+    if (legacyLock !== null) {
+        for (const surface of profile.surfaces) {
+            for (const skill of selectedSkills) {
+                const skillDirRel = `${surface.folder}/${skill}`;
+                const skillDirAbs = join(targetRepo, skillDirRel);
+                if (!existsSync(skillDirAbs))
+                    continue;
+                if (manifest.files.some((file) => file.startsWith(`${skillDirRel}/`)))
+                    continue; // already ours
+                const check = checkLegacyOwnership(legacyLock, targetRepo, skillDirRel, skillDirAbs);
+                if (check.owned) {
+                    for (const relFile of walkFiles(skillDirAbs))
+                        takeoverFiles.add(`${skillDirRel}/${relFile}`);
+                }
+                else {
+                    takeoverConflictReasons.set(skillDirRel, check.reason);
+                }
+            }
+        }
+    }
+    const manifestFiles = new Set([...manifest.files, ...takeoverFiles]);
+    const sourceFilesBySkill = new Map();
+    for (const skill of selectedSkills)
+        sourceFilesBySkill.set(skill, walkFiles(join(assetsDir, skill)));
+    const written = [];
+    const unchanged = [];
+    const conflicts = [];
+    const keptPaths = new Set();
+    for (const surface of profile.surfaces) {
+        for (const skill of selectedSkills) {
+            const skillDirRel = `${surface.folder}/${skill}`;
+            const skillDirAbs = join(targetRepo, skillDirRel);
+            const skillDirExists = existsSync(skillDirAbs);
+            const managedByUs = [...manifestFiles].some((file) => file.startsWith(`${skillDirRel}/`));
+            if (skillDirExists && !managedByUs) {
+                conflicts.push({
+                    folder: surface.folder,
+                    skill,
+                    reason: takeoverConflictReasons.get(skillDirRel) ??
+                        "a user-owned skill folder already exists with this name; deploy left it untouched",
+                });
+                continue; // never write into it, never claim its files in the manifest
+            }
+            for (const relFile of sourceFilesBySkill.get(skill) ?? []) {
+                const targetRel = `${skillDirRel}/${relFile}`;
+                keptPaths.add(targetRel);
+                const targetAbs = join(targetRepo, targetRel);
+                const content = readFileSync(join(assetsDir, skill, relFile));
+                if (existsSync(targetAbs) && statSync(targetAbs).isFile() && Buffer.compare(readFileSync(targetAbs), content) === 0) {
+                    unchanged.push(targetRel);
+                    continue;
+                }
+                mkdirSync(dirname(targetAbs), { recursive: true });
+                writeFileSync(targetAbs, content);
+                written.push(targetRel);
+            }
+        }
+    }
+    const removed = [];
+    for (const relPath of manifestFiles) {
+        if (keptPaths.has(relPath))
+            continue;
+        // Defense in depth: only ever remove a path inside a folder this
+        // profile actually manages, even though every manifest entry should
+        // already satisfy that by construction.
+        if (!profile.surfaces.some((surface) => relPath.startsWith(`${surface.folder}/`)))
+            continue;
+        const absolute = join(targetRepo, relPath);
+        if (existsSync(absolute)) {
+            unlinkSync(absolute);
+            removeEmptyParents(targetRepo, dirname(absolute));
+        }
+        removed.push(relPath);
+    }
+    writeManifest(targetRepo, [...keptPaths]);
+    // legacyLock's own record of what it wrote under a skills folder stops
+    // being meaningful the moment this deploy has assessed it — taken over,
+    // or confirmed a conflict either way — so its entries are stripped
+    // regardless of this run's outcome, deleting the lock outright once
+    // nothing (including sibling packages' own sections) is left in it.
+    if (legacyLock !== null) {
+        const legacySkillFolders = [...profile.surfaces.map((surface) => surface.folder), ...retiredFolders(profile)];
+        stripTakenOverEntries(legacyLock, legacySkillFolders);
+    }
+    const retiredRemovals = [];
+    const availableSkillSet = new Set(availableSkills);
+    for (const folder of retiredFolders(profile)) {
+        const folderAbs = join(targetRepo, folder);
+        if (!existsSync(folderAbs))
+            continue;
+        for (const name of directoryNames(folderAbs)) {
+            if (!availableSkillSet.has(name))
+                continue; // not ours to manage — left byte-for-byte
+            removeDirRecursive(join(folderAbs, name));
+            retiredRemovals.push(`${folder}/${name}`);
+        }
+        if (existsSync(folderAbs) && readdirSync(folderAbs).length === 0) {
+            rmdirSync(folderAbs);
+            retiredRemovals.push(folder);
+        }
+    }
+    return {
+        written: written.sort(),
+        unchanged: unchanged.sort(),
+        removed: removed.sort(),
+        conflicts: conflicts.sort((a, b) => `${a.folder}/${a.skill}`.localeCompare(`${b.folder}/${b.skill}`)),
+        manifestPath: manifestPathFor(targetRepo),
+        retiredRemovals: retiredRemovals.sort(),
+    };
+}
+//# sourceMappingURL=deploy.js.map

package/packages/agent-skills/dist/deploy.js.map

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package/packages/agent-skills/dist/doctor.d.ts

@@ -0,0 +1,24 @@
+import { validateProfileDocument } from "./profile.js";
+export interface DoctorIssue {
+    readonly severity: "error" | "info";
+    readonly path: string;
+    readonly reason: string;
+}
+export interface DoctorResult {
+    readonly ok: boolean;
+    readonly issues: readonly DoctorIssue[];
+}
+export interface DoctorAssetsResult extends DoctorResult {
+    readonly malformedSkills: ReadonlySet<string>;
+}
+/** Validates assets/ in isolation: every skill folder has a well-formed SKILL.md whose `name` matches the folder. */
+export declare function doctorAssets(assetsDir: string): DoctorAssetsResult;
+export { validateProfileDocument };
+export interface DoctorDeploymentOptions {
+    readonly assetsDir: string;
+    readonly targetRepo: string;
+    readonly profilePath?: string;
+    readonly profileSchemaPath?: string;
+}
+export declare function doctorDeployment(options: DoctorDeploymentOptions): DoctorResult;
+//# sourceMappingURL=doctor.d.ts.map