@amalgm/shell 0.1.164-preview.36061234379 → 0.1.164-preview.36809057014

package/dist/apply-rows.js

@@ -0,0 +1,150 @@
+/** The Apply tables' one reading of intents, terminal dispositions, history
+ * resolution and newer local work. The store reads these answers on the main
+ * thread; its saves (apply-saves.ts) read the same answers inside their
+ * savepoint on the saver thread. */
+import { assertApplyIntent, decodeAcceptedEntityRecord, decodeLocalEntityRecord, isExactOwnAcceptance, } from "@amalgm/live";
+import { cachedStatement } from "./sqlite.js";
+export const sameIntent = (left, right) => left.attemptId === right.attemptId
+    && left.authorityId === right.authorityId
+    && left.entityId === right.entityId
+    && left.fromSequence === right.fromSequence
+    && left.throughSequence === right.throughSequence
+    && left.targetMutationId === right.targetMutationId
+    && left.targetState === right.targetState
+    && left.targetType === right.targetType
+    && left.createdAt === right.createdAt;
+const decodeIntent = (json) => {
+    const intent = JSON.parse(json);
+    assertApplyIntent(intent);
+    return intent;
+};
+export function readIntent(database, entityId, authorityId) {
+    const row = (authorityId
+        ? cachedStatement(database, `SELECT intent_json AS intentJson FROM entity_apply_intents
+        WHERE authority_id = ? AND entity_id = ?`).get(authorityId, entityId)
+        : cachedStatement(database, "SELECT intent_json AS intentJson FROM entity_apply_intents WHERE entity_id = ?")
+            .get(entityId));
+    return row ? decodeIntent(row.intentJson) : null;
+}
+/** The intent's durable row, which must still name this exact attempt. */
+function heldRow(database, intent, owner) {
+    const row = cachedStatement(database, `SELECT intent_json AS intentJson, recovery_location AS location,
+      retirement_json AS retirementJson
+    FROM entity_apply_intents WHERE authority_id = ? AND entity_id = ?`)
+        .get(intent.authorityId, intent.entityId);
+    if (row && !sameIntent(decodeIntent(row.intentJson), intent))
+        throw new Error(`${owner} belongs to a different intent`);
+    return row;
+}
+export function recoveryLocation(database, intent) {
+    return heldRow(database, intent, "Apply recovery locator")?.location ?? null;
+}
+export function readRetirement(database, intent) {
+    const row = heldRow(database, intent, "Apply retirement");
+    if (!row?.retirementJson)
+        return null;
+    const value = JSON.parse(row.retirementJson);
+    if (!value.retirement.token || !sameIntent(value.retirement.intent, intent)
+        || !["materialized", "superseded-by-local", "cancelled"].includes(value.retirement.purpose.kind)) {
+        throw new Error("Invalid Apply terminal disposition");
+    }
+    return value;
+}
+export function requireIntent(database, intent) {
+    const existing = readIntent(database, intent.entityId, intent.authorityId);
+    if (!existing)
+        throw new Error(`entity ${intent.entityId} has no durable Apply intent`);
+    if (!sameIntent(existing, intent))
+        throw new Error("Apply operation belongs to a different intent");
+    if (readRetirement(database, intent))
+        throw new Error("Apply intent is terminal and owns cleanup only");
+    return existing;
+}
+/** The terminal disposition a cleanup acknowledgement or description names. */
+export function ownedCleanup(database, retirement) {
+    const stored = readRetirement(database, retirement.intent);
+    if (!stored || stored.retirement.token !== retirement.token
+        || stored.retirement.purpose.kind !== retirement.purpose.kind)
+        throw new Error("Apply cleanup no longer owns this intent");
+    return stored.cleanup;
+}
+export const applyState = (database, authorityId, entityId) => cachedStatement(database, `SELECT resolved_through AS resolvedThrough,
+      materialized_sequence AS materializedSequence, materialized_record_json AS materializedRecordJson
+    FROM entity_apply_state WHERE authority_id = ? AND entity_id = ?`).get(authorityId, entityId);
+/** Where one entity's Apply history stands. Without a state row, an installed
+ * snapshot already resolved every record it contained, so the entity's first
+ * Inbox record after that watermark follows its earlier dense sequences.
+ * Selection and terminal commit both read this one answer. */
+export function applyResolution(database, authorityId, entityId) {
+    const state = applyState(database, authorityId, entityId);
+    const rows = cachedStatement(database, `SELECT record_json AS recordJson, delivery_sequence AS deliverySequence
+      FROM record_inbox WHERE authority_id = ? AND entity_id = ? AND global_sequence > ?
+     ORDER BY global_sequence`).all(authorityId, entityId, state?.resolvedThrough ?? 0);
+    const baseline = cachedStatement(database, `SELECT delivery_sequence AS deliverySequence
+      FROM authority_snapshot_baselines WHERE authority_id = ?`).get(authorityId);
+    const first = rows[0];
+    const resolvedThrough = !state && first && baseline && first.deliverySequence > baseline.deliverySequence
+        ? decodeAcceptedEntityRecord(first.recordJson).globalSequence - 1
+        : state?.resolvedThrough ?? 0;
+    return { state, resolvedThrough, rows };
+}
+/** Live's local-work gate over this entity's Outbox rows: one the authority
+ * has not sequenced yet (a pending row carries no sequence), or one it
+ * sequenced after the target. Each is its own seek into the entity's channel
+ * index; one disjunction would walk the entity's retained receipts. */
+export function hasLocalWorkAfter(database, authorityId, entityId, targetSequence) {
+    return cachedStatement(database, `SELECT
+        EXISTS (SELECT 1 FROM record_outbox WHERE authority_id = ? AND entity_id = ? AND global_sequence IS NULL)
+     OR EXISTS (SELECT 1 FROM record_outbox WHERE authority_id = ? AND entity_id = ? AND global_sequence > ?)`)
+        .pluck().get(authorityId, entityId, authorityId, entityId, targetSequence) === 1;
+}
+/** This computer's own exact publication, when it alone can resolve the
+ * entity's open history: no intent, Inbox still starts where the work saw it
+ * and ends at this record, the retained Outbox receipt is its exact own
+ * acceptance, no local work follows it, and the sharing basis holds its
+ * result. Null otherwise; then the ordinary Apply journey decides. */
+export function ownPublication(database, input) {
+    if (readIntent(database, input.entityId))
+        return null;
+    const { state: prior, resolvedThrough, rows } = applyResolution(database, input.authorityId, input.entityId);
+    const tail = rows.at(-1);
+    if (resolvedThrough !== input.resolvedThrough || !tail)
+        return null;
+    const accepted = decodeAcceptedEntityRecord(tail.recordJson);
+    if (accepted.globalSequence !== input.globalSequence || accepted.mutationId !== input.mutationId)
+        return null;
+    const receipt = cachedStatement(database, `SELECT record_json AS recordJson, status, global_sequence AS globalSequence
+      FROM record_outbox WHERE mutation_id = ?`).get(accepted.mutationId);
+    if (receipt?.status !== "accepted" || receipt.globalSequence === null
+        || !isExactOwnAcceptance({ record: decodeLocalEntityRecord(receipt.recordJson),
+            status: "accepted", globalSequence: receipt.globalSequence }, accepted))
+        return null;
+    if (hasLocalWorkAfter(database, input.authorityId, input.entityId, accepted.globalSequence))
+        return null;
+    const shared = cachedStatement(database, "SELECT version FROM detection_notebook WHERE uuid = ?")
+        .get(input.entityId);
+    return shared?.version === accepted.resultState ? { after: resolvedThrough, prior, accepted } : null;
+}
+/** What an installed snapshot watermark resolves: each entity's retained
+ * history at or below it, and each intent whose target it already holds. */
+export function snapshotHistory(database) {
+    const rows = cachedStatement(database, `SELECT inbox.authority_id AS authorityId, inbox.entity_id AS entityId,
+        MAX(inbox.global_sequence) AS resolvedThrough
+      FROM record_inbox AS inbox
+      JOIN authority_snapshot_baselines AS baseline ON baseline.authority_id = inbox.authority_id
+      LEFT JOIN entity_apply_state AS state
+        ON state.authority_id = inbox.authority_id AND state.entity_id = inbox.entity_id
+     WHERE inbox.delivery_sequence <= baseline.delivery_sequence
+       AND inbox.global_sequence > COALESCE(state.resolved_through, 0)
+     GROUP BY inbox.authority_id, inbox.entity_id`).all();
+    const intents = cachedStatement(database, `SELECT intent.intent_json AS intentJson
+      FROM entity_apply_intents AS intent
+      JOIN record_inbox AS target
+        ON target.authority_id = intent.authority_id AND target.entity_id = intent.entity_id
+       AND target.global_sequence = json_extract(intent.intent_json, '$.throughSequence')
+      JOIN authority_snapshot_baselines AS baseline ON baseline.authority_id = intent.authority_id
+     WHERE target.delivery_sequence <= baseline.delivery_sequence`).all()
+        .map(({ intentJson }) => decodeIntent(intentJson));
+    return { rows, intents };
+}
+//# sourceMappingURL=apply-rows.js.map

package/dist/apply-rows.js.map

@@ -0,0 +1 @@
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package/dist/apply-saves.d.ts

@@ -0,0 +1,85 @@
+import { type EntityApplyIntent, type EntityApplyRetirement } from "@amalgm/live";
+import type Database from "better-sqlite3";
+import { type CleanupDisposition, type OwnPublication } from "./apply-rows.js";
+import { type ApplyOwnershipWait, type AttributionScope } from "./detection/apply-ownership.js";
+import type { RepositoryObservationPair } from "./git-repository-host.js";
+import { type GroundBasisData } from "./ground-basis.js";
+import type { ApplyGroundRow } from "./entity-apply-store.js";
+import type { GroundRow } from "./ground-row.js";
+/** A verified row as data: its repository observation's proof was closed
+ * when the save was posted. */
+export type ApplyGroundRowData = Omit<ApplyGroundRow, "repositoryObservation"> & {
+    readonly repositoryObservation?: Omit<RepositoryObservationPair, "proof">;
+};
+export interface VerifiedGroundData {
+    readonly observed: readonly ApplyGroundRowData[];
+    readonly shared: readonly ApplyGroundRowData[];
+    readonly removedObserved: readonly string[];
+    readonly removedShared: readonly string[];
+}
+export declare function beginIntent(database: Database.Database, intent: EntityApplyIntent): void;
+export declare function setIntentPhase(database: Database.Database, intent: EntityApplyIntent): void;
+export declare function acknowledgeCleanup(database: Database.Database, retirement: EntityApplyRetirement): void;
+/** The negative ownership predicate and its publication share one writer:
+ * concurrent lanes bind in post order, each against every earlier binding.
+ * Different address leases can still alias the same physical object. */
+export declare function bindRecovery(database: Database.Database, input: {
+    readonly intent: EntityApplyIntent;
+    readonly directory: string;
+    readonly scope: AttributionScope;
+}): ApplyOwnershipWait | null;
+export interface AdoptedSnapshotHistory {
+    readonly resolvedEntities: number;
+    readonly supersededIntents: readonly EntityApplyIntent[];
+}
+/** Only an explicitly installed snapshot watermark resolves history. An
+ * intent retires only when the poster proved its preparation untouched and
+ * it is still unbound now: effects begin only after a binding commits. */
+export declare function adoptSnapshotHistory(database: Database.Database, input: {
+    readonly retirable: readonly EntityApplyIntent[];
+}): AdoptedSnapshotHistory;
+/** This computer's own exact publication resolves without an Apply effect.
+ * The poster proved its ground holds the result's placement. */
+export declare function resolveOwnPublication(database: Database.Database, input: OwnPublication & {
+    readonly resolvedAt: number;
+}): boolean;
+export interface ApplyRetireSave {
+    readonly retirement: EntityApplyRetirement;
+    readonly cleanup: CleanupDisposition;
+    /** The ground facts the retirement proof read, which must stand unchanged. */
+    readonly attribution: GroundBasisData | null;
+    /** A cancelled filesystem effect's original placement, under its basis. */
+    readonly repair: {
+        readonly rows: readonly GroundRow[];
+        readonly basis: GroundBasisData;
+    } | null;
+    /** A materialized filesystem result, exactly as Verify proved it. */
+    readonly verified: {
+        readonly ground: VerifiedGroundData;
+        readonly basis: GroundBasisData;
+    } | null;
+    readonly resolvedAt: number;
+}
+/** One terminal outcome: repair or projection, resolution, and the durable
+ * disposition that hands cleanup its description. */
+export declare function retire(database: Database.Database, input: ApplyRetireSave): void;
+/** One subtree's rows at a new address in both inventories, committed before
+ * its ground moves: a crash between belongs to the Apply receipt. */
+export interface RowRelocation {
+    readonly uuid: string;
+    /** Where its root now lives; null releases its observed rows only. */
+    readonly destination: {
+        readonly absolutePath: string;
+        readonly relativePath: string;
+        readonly root?: {
+            readonly uuid: string;
+            readonly resourceId: string;
+        };
+    } | null;
+}
+export declare function relocateRows(database: Database.Database, relocation: RowRelocation): void;
+/** A rename keeps the object and moves only its ctime. */
+export declare function renameSignatures(database: Database.Database, input: {
+    readonly uuid: string;
+    readonly ctimeNs: bigint;
+}): void;

package/dist/apply-saves.js

@@ -0,0 +1,238 @@
+/** The Apply rail's writes, run only by the ground file's saver thread
+ * (ground-saver.ts). The poster answers what disk and its leases hold when it
+ * posts: witnesses, receipts, placement. Each save answers what only the
+ * database holds, inside its savepoint, the way one SQLite transaction did.
+ * entity-apply-store.ts keeps the reads and the posting. */
+import { createHash } from "node:crypto";
+import { assertApplyIntent, canonicalVersion, decodeAcceptedEntityRecord, isConstructType, membershipHash, } from "@amalgm/live";
+import { applyResolution, applyState, hasLocalWorkAfter, ownedCleanup, ownPublication, readIntent, readRetirement, recoveryLocation, requireIntent, sameIntent, snapshotHistory, } from "./apply-rows.js";
+import { ApplyOwnershipSnapshot, ownershipWait, sqliteApplyOwnership } from "./detection/apply-ownership.js";
+import { membershipParents } from "./detection/container-membership.js";
+import { GroundBasis } from "./ground-basis.js";
+import { groundStore } from "./ground-store.js";
+import { renamedSignature } from "./source-signature.js";
+import { cachedStatement } from "./sqlite.js";
+const sha256Hex = (input) => createHash("sha256").update(input).digest("hex");
+const upsertState = (database, entityId, authorityId, resolvedThrough, materializedSequence, materializedRecordJson) => {
+    cachedStatement(database, `INSERT INTO entity_apply_state(
+      entity_id, authority_id, resolved_through, materialized_sequence, materialized_record_json
+    ) VALUES (?, ?, ?, ?, ?)
+    ON CONFLICT(entity_id) DO UPDATE SET
+      authority_id = excluded.authority_id,
+      resolved_through = excluded.resolved_through,
+      materialized_sequence = excluded.materialized_sequence,
+      materialized_record_json = excluded.materialized_record_json`)
+        .run(entityId, authorityId, resolvedThrough, materializedSequence, materializedRecordJson);
+};
+const resolveInbox = (database, at, authorityId, entityId, after, through) => {
+    cachedStatement(database, `UPDATE record_inbox SET resolved_at = ?
+     WHERE authority_id = ? AND entity_id = ? AND global_sequence > ? AND global_sequence <= ?`)
+        .run(at, authorityId, entityId, after, through);
+};
+const deleteIntent = (database, intent) => {
+    cachedStatement(database, "DELETE FROM entity_apply_intents WHERE authority_id = ? AND entity_id = ?")
+        .run(intent.authorityId, intent.entityId);
+};
+export function beginIntent(database, intent) {
+    assertApplyIntent(intent);
+    const existing = readIntent(database, intent.entityId, intent.authorityId);
+    if (existing) {
+        if (readRetirement(database, existing))
+            throw new Error("Apply intent still owns terminal cleanup");
+        if (!sameIntent(existing, intent) || existing.phase !== intent.phase) {
+            throw new Error(`entity ${intent.entityId} already has a different Apply intent`);
+        }
+        return;
+    }
+    cachedStatement(database, "INSERT INTO entity_apply_intents(entity_id, authority_id, intent_json) VALUES (?, ?, ?)")
+        .run(intent.entityId, intent.authorityId, JSON.stringify(intent));
+}
+export function setIntentPhase(database, intent) {
+    assertApplyIntent(intent);
+    requireIntent(database, intent);
+    const updated = cachedStatement(database, `UPDATE entity_apply_intents SET intent_json = ?
+     WHERE authority_id = ? AND entity_id = ?`).run(JSON.stringify(intent), intent.authorityId, intent.entityId);
+    if (updated.changes !== 1)
+        throw new Error("Apply intent phase was not durable");
+}
+export function acknowledgeCleanup(database, retirement) {
+    ownedCleanup(database, retirement);
+    deleteIntent(database, retirement.intent);
+}
+/** The negative ownership predicate and its publication share one writer:
+ * concurrent lanes bind in post order, each against every earlier binding.
+ * Different address leases can still alias the same physical object. */
+export function bindRecovery(database, input) {
+    const { intent, directory } = input;
+    requireIntent(database, intent);
+    const previous = recoveryLocation(database, intent);
+    if (previous !== null && previous !== directory)
+        throw new Error("Apply recovery locator cannot move");
+    const owners = new ApplyOwnershipSnapshot(sqliteApplyOwnership(database), intent).use(input.scope);
+    const waiting = ownershipWait(owners, previous !== null);
+    if (waiting)
+        return waiting;
+    cachedStatement(database, `UPDATE entity_apply_intents SET recovery_location = ?
+    WHERE authority_id = ? AND entity_id = ?`).run(directory, intent.authorityId, intent.entityId);
+    return null;
+}
+/** Only an explicitly installed snapshot watermark resolves history. An
+ * intent retires only when the poster proved its preparation untouched and
+ * it is still unbound now: effects begin only after a binding commits. */
+export function adoptSnapshotHistory(database, input) {
+    const mayRetire = (intent) => recoveryLocation(database, intent) === null
+        && input.retirable.some(candidate => sameIntent(candidate, intent));
+    const history = snapshotHistory(database);
+    const supersededIntents = [];
+    let resolvedEntities = 0;
+    for (const row of history.rows) {
+        const intent = readIntent(database, row.entityId);
+        if (intent && (readRetirement(database, intent) || !mayRetire(intent)))
+            continue;
+        const prior = applyState(database, row.authorityId, row.entityId);
+        upsertState(database, row.entityId, row.authorityId, row.resolvedThrough, prior?.materializedSequence ?? null, prior?.materializedRecordJson ?? null);
+        resolvedEntities += 1;
+    }
+    for (const intent of history.intents) {
+        if (readRetirement(database, intent) || !mayRetire(intent))
+            continue;
+        deleteIntent(database, intent);
+        supersededIntents.push(intent);
+    }
+    return { resolvedEntities, supersededIntents };
+}
+/** This computer's own exact publication resolves without an Apply effect.
+ * The poster proved its ground holds the result's placement. */
+export function resolveOwnPublication(database, input) {
+    const own = ownPublication(database, input);
+    if (!own)
+        return false;
+    resolveInbox(database, input.resolvedAt, input.authorityId, input.entityId, own.after, input.globalSequence);
+    upsertState(database, input.entityId, input.authorityId, input.globalSequence, own.prior?.materializedSequence ?? null, own.prior?.materializedRecordJson ?? null);
+    return true;
+}
+/** One terminal outcome: repair or projection, resolution, and the durable
+ * disposition that hands cleanup its description. */
+export function retire(database, input) {
+    const { retirement, repair, verified } = input;
+    const { intent, purpose } = retirement;
+    const targetRow = cachedStatement(database, `SELECT record_json AS recordJson FROM record_inbox
+     WHERE authority_id = ? AND entity_id = ? AND global_sequence = ?`)
+        .get(intent.authorityId, intent.entityId, intent.throughSequence);
+    if (!targetRow && purpose.kind !== "cancelled")
+        throw new Error("Apply target disappeared from its retained Inbox");
+    if (purpose.kind === "materialized" && !isConstructType(intent.targetType) && !verified) {
+        throw new Error("Apply completion has no Verify proof");
+    }
+    groundStore(database).write(writer => {
+        requireIntent(database, intent);
+        if (input.attribution && !GroundBasis.fromData(input.attribution).unchanged(database)) {
+            throw new Error("Apply retirement physical attribution changed");
+        }
+        if (repair) {
+            if (!writer.acceptBasis(GroundBasis.fromData(repair.basis)))
+                throw new Error("Apply recovery placement changed before cancellation");
+            writer.replace("entities", repair.rows);
+        }
+        const { state: prior, resolvedThrough } = applyResolution(database, intent.authorityId, intent.entityId);
+        if (purpose.kind !== "cancelled" && resolvedThrough !== intent.fromSequence) {
+            throw new Error("Apply resolution changed before terminal commit");
+        }
+        const localWork = hasLocalWorkAfter(database, intent.authorityId, intent.entityId, intent.throughSequence);
+        if (purpose.kind === "materialized" && localWork)
+            throw new Error("Newer local work invalidated Apply completion");
+        if (purpose.kind === "superseded-by-local" && !localWork)
+            throw new Error("Apply supersession lacks newer durable local work");
+        if (verified) {
+            if (!writer.acceptBasis(GroundBasis.fromData(verified.basis)))
+                throw new Error("Apply Verify projection changed before terminal commit");
+            project(database, writer, verified.ground);
+        }
+        if (purpose.kind !== "cancelled") {
+            resolveInbox(database, input.resolvedAt, intent.authorityId, intent.entityId, intent.fromSequence, intent.throughSequence);
+            upsertState(database, intent.entityId, intent.authorityId, intent.throughSequence, purpose.kind === "materialized" ? intent.throughSequence : prior?.materializedSequence ?? null, purpose.kind === "materialized" ? JSON.stringify(decodeAcceptedEntityRecord(targetRow.recordJson).change.result)
+                : prior?.materializedRecordJson ?? null);
+        }
+        cachedStatement(database, `UPDATE entity_apply_intents SET retirement_json = ?
+      WHERE authority_id = ? AND entity_id = ?`).run(JSON.stringify({ retirement, cleanup: input.cleanup }), intent.authorityId, intent.entityId);
+    });
+}
+/** Verify's exact rows replace both inventories; only active results stay
+ * observed. Each container whose membership they change, and each container
+ * they replace, re-derives its membership version. */
+function project(database, writer, ground) {
+    for (const row of ground.observed)
+        if (row.repositoryObservation)
+            writer.observeRepository(row.repositoryObservation);
+    const containers = new Set();
+    for (const [inventory, rows, removals] of [
+        ["entities", ground.observed, ground.removedObserved],
+        ["detection_notebook", ground.shared, ground.removedShared],
+    ]) {
+        for (const uuid of membershipParents([
+            ...removals.map(uuid => ({ before: writer.get(inventory, uuid), after: null })),
+            ...rows.map(({ record }) => ({ before: writer.get(inventory, record.uuid), after: record })),
+        ]))
+            containers.add(uuid);
+        for (const { record } of rows) {
+            if (record.type === "workspace" || record.type === "folder")
+                containers.add(record.uuid);
+        }
+        const projected = rows.map(({ repositoryObservation: _, record, ...row }) => ({ ...row, ...record }));
+        writer.replace(inventory, inventory === "entities" ? projected.filter(row => row.status === "active") : projected, [...removals, ...(inventory === "entities" ? projected.filter(row => row.status !== "active").map(row => row.uuid) : [])], "replace");
+    }
+    refreshMembershipVersions(database, writer, containers);
+}
+/** Each inventory derives membership from its own children. Applying one
+ * accepted result cannot admit another observed, unshared child by accident. */
+function refreshMembershipVersions(database, writer, uuids) {
+    for (const inventory of ["entities", "detection_notebook"]) {
+        for (const uuid of uuids) {
+            const row = writer.get(inventory, uuid);
+            if (!row || (row.type !== "workspace" && row.type !== "folder"))
+                continue;
+            const children = cachedStatement(database, `SELECT uuid, name FROM ${inventory}
+         WHERE parent_uuid = ? AND status = 'active' ORDER BY name, uuid`).all(uuid);
+            const version = canonicalVersion({
+                type: row.type, parentUUID: row.parentUUID, name: row.name, status: row.status,
+                payloadVersion: membershipHash(children, sha256Hex),
+            }, sha256Hex);
+            writer.update(inventory, uuid, { version }, "retain-equivalent");
+        }
+    }
+}
+export function relocateRows(database, relocation) {
+    const store = groundStore(database);
+    store.write(writer => {
+        for (const inventory of ["entities", "detection_notebook"]) {
+            const prior = writer.get(inventory, relocation.uuid);
+            if (!prior) {
+                if (inventory === "entities")
+                    throw new Error("Relocation lost its physical identity");
+                continue;
+            }
+            const rows = store.rowsUnder(inventory, prior.rootUUID, prior.relativePath);
+            const { destination } = relocation;
+            if (!destination) {
+                if (inventory === "entities")
+                    writer.replace(inventory, [], rows.map(row => row.uuid));
+                continue;
+            }
+            writer.replace(inventory, rows.map(row => ({ ...row,
+                ...(destination.root ? { rootUUID: destination.root.uuid, resourceId: destination.root.resourceId } : {}),
+                relativePath: destination.relativePath + row.relativePath.slice(prior.relativePath.length),
+                absolutePath: destination.absolutePath + row.absolutePath.slice(prior.absolutePath.length),
+            })), [], sharingOf(inventory));
+        }
+    });
+}
+/** A rename keeps the object and moves only its ctime. */
+export function renameSignatures(database, input) {
+    groundStore(database).write(writer => {
+        for (const inventory of ["entities", "detection_notebook"]) {
+            writer.update(inventory, input.uuid, { sourceSignature: renamedSignature(writer.get(inventory, input.uuid)?.sourceSignature ?? null, input) }, sharingOf(inventory));
+        }
+    });
+}
+const sharingOf = (inventory) => inventory === "detection_notebook" ? "retain-equivalent" : undefined;
+//# sourceMappingURL=apply-saves.js.map

package/dist/apply-saves.js.map

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package/dist/boot.js

@@ -50,7 +50,6 @@ export async function bootShell(config = {}) {
     const env = config.env ?? process.env;
     const token = config.runtimeToken ?? runtimeTokenFromEnv(env) ?? "shell-internal";
     const home = config.homedir ?? homedir();
-    const pty = createPtyHost({ env, defaultCwd: home });
     const runtimeDir = env.AMALGM_RUNTIME_STATE_DIR || runtimeStateDir(userDir, deviceId, coerceRuntimeLabel(env.AMALGM_RUNTIME_LABEL || env.AMALGM_BRANCH));
     const logDir = env.AMALGM_LOG_DIR || runtimeLogDir(runtimeDir);
     const state = new StateRail({
@@ -66,6 +65,7 @@ export async function bootShell(config = {}) {
         state,
     });
     const workspace = workspaceHost.registry;
+    const pty = createPtyHost({ env, defaultCwd: workspaceRoot });
     const platformTools = await platformToolDefinitions({
         agents: { tools: createAgentsMcpTools({}) },
         apps: { tools: createAppsMcpTools({}) },
@@ -195,6 +195,7 @@ export async function bootShell(config = {}) {
         ...(proxyBaseUrl ? { proxyBaseUrl } : {}),
         ...(config.credentialBroker ? { credentialBroker: config.credentialBroker } : {}),
         amalgmDir: userDir,
+        workspaces: workspaceHost.scope,
     });
     const chatMcp = createChatMcpServer(chat.chat, { agentRunner: chat.agentRunner });
     const automationsMcp = config.automations

package/dist/boot.js.map

@@ -1 +1 @@
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package/dist/capture-work.d.ts

@@ -0,0 +1,8 @@
+/** A capture attempt owns all started reads, including after its first failure.
+ * Admission applies backpressure to the walk instead of queuing its whole tree. */
+export declare class CaptureWork {
+    #private;
+    constructor(limit: number);
+    add(read: () => Promise<void>): Promise<void>;
+    run(walk: () => Promise<void>): Promise<void>;
+}