@aligndottech/cli 0.63.0 → 0.64.0

package/dist/commands/import/sessions.js

@@ -20,7 +20,7 @@ import { SessionFormatUnverifiedError } from '../../lib/sessions/types.js';
 const FREE_TEXT_CONFIRM_CONCURRENCY = 3;
 /** Mirrors ratify.ts's resolveRatifier exactly (git identity, then the OS user) but is not
  *  imported from there - see the PR description for why this one small duplication was
- *  chosen over reaching into a command file ALI-808 does not own. */
+ *  chosen over reaching into a command file session import does not own. */
 async function resolveConfirmer() {
     return (await getGitIdentity()) ?? os.userInfo().username;
 }
@@ -43,7 +43,7 @@ class SessionCandidateItem {
         };
     }
 }
-/** Pass B (ALI-809): a heuristic-proposed, LLM-confirmed free-text redirect. Rendered with a
+/** Pass B: a heuristic-proposed, LLM-confirmed free-text redirect. Rendered with a
  *  visibly different tag and its confidence score so a low-confidence prose guess never carries
  *  the same visual weight as a rejected-alternatives-and-rationale structured record (the
  *  ticket's own requirement - see extract-freetext.ts and confirm-freetext.ts for the two
@@ -70,7 +70,7 @@ class FreeTextCandidateItem {
     }
 }
 /**
- * Pass C (ALI-810): a Claude Code auto-memory file. No LLM stage, unlike Pass B - these are
+ * Pass C: a Claude Code auto-memory file. No LLM stage, unlike Pass B - these are
  * already curated by the harness itself (one fact per file, typed in frontmatter), so there
  * is no heuristic to adjudicate. It still goes through the same confirm-each review, because
  * a memory file is a personal note, not something to bulk-import.
@@ -101,7 +101,7 @@ class MemoryCandidateItem {
     }
 }
 /**
- * ALI-835: the agent a run's ping is attributed to - the one that contributed the most parsed
+ * The agent a run's ping is attributed to - the one that contributed the most parsed
  * session files. Several agents can be detected on one machine, the ping carries one name, and
  * an invented "mixed" would be a value the gateway's closed AGENT_VALUES enum does not have.
  * Ties resolve to the first inserted, which is registry order, so the same machine reports the
@@ -149,7 +149,7 @@ export function registerImportSessionsCommand(importCmd) {
         }
         const structured = [];
         const freeText = [];
-        // ALI-835: files actually parsed, not files located - an adapter with no verified fixture
+        // Files actually parsed, not files located - an adapter with no verified fixture
         // is skipped below, and counting its files would report work that never happened.
         let sessionsScanned = 0;
         // The agent whose data this run is about. Several can be detected; the ping carries one
@@ -180,13 +180,13 @@ export function registerImportSessionsCommand(importCmd) {
                 freeText.push(...findFreeTextCandidates(session));
             }
         }
-        // Pass C (ALI-810): the harness's own auto-memory, which is a separate source from any
+        // Pass C: the harness's own auto-memory, which is a separate source from any
         // session transcript - it is read whether or not an adapter found session files, because
         // memory survives the transcript retention sweep that deletes them.
         const memory = extractMemoryDecisions(locateMemoryFiles(cwd));
         const agent = dominantAgent(filesByAgent);
         const candidatesFound = structured.length + freeText.length + memory.length;
-        // ALI-835: the two scan-time stages. Emitted before the review loop, so a user who
+        // The two scan-time stages. Emitted before the review loop, so a user who
         // abandons the review still reports what was scanned and found - which is the drop-off
         // the funnel exists to show. Fire-and-forget: telemetry never delays or fails a command.
         if (agent) {
@@ -216,8 +216,8 @@ export function registerImportSessionsCommand(importCmd) {
             : '';
         console.log(chalk.bold(`\nFound ${totalFound} decision-shaped moment${totalFound === 1 ? '' : 's'} to review${truncatedNote}.\n`));
         console.log(chalk.dim('Each one enters the graph as an agent claim (unratified) - review it, `align ratify` later stands behind it as a human.\n'));
-        // Pass B: only an LLM-adjudicated result may reach the review list (align decision
-        // ALI-409's "heuristic proposes, LLM adjudicates, only adjudicated results assert").
+        // Pass B: only an LLM-adjudicated result may reach the review list (an Align decision:
+        // "heuristic proposes, LLM adjudicates, only adjudicated results assert").
         // Bounded concurrency, not one-at-a-time: each call is a full LLM round-trip, and
         // FREE_TEXT_CONFIRM_CONCURRENCY matches the ingest batch concurrency in
         // personal-import.ts (3) rather than a larger number, since a local Ollama model is a
@@ -286,7 +286,7 @@ export function registerImportSessionsCommand(importCmd) {
                 console.log(chalk.dim(`Skipped ${result.skipped}.`));
             if (result.remaining > 0)
                 console.log(chalk.dim(`${result.remaining} not reviewed.`));
-            // ALI-835: the line the demo reads aloud, and the stage that measures it - built from
+            // The line the demo reads aloud, and the stage that measures it - built from
             // one counts object so the printed number and the reported number cannot disagree.
             // `ratified` is 0 by construction here: this command writes claims, and ratifying is a
             // separate human act. That zero is the point of the sentence.

package/dist/commands/import/sessions.js.map

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package/dist/commands/import.d.ts

@@ -1,6 +1,6 @@
 import type { Command } from 'commander';
 /**
- * ALI-951: `import` was retired in 0.40.0, and a RETIRED command still has to exist.
+ * `import` was retired in 0.40.0, and a RETIRED command still has to exist.
  *
  * Deleting the alias outright is not the end state, because `align` has a default action for a
  * free-text question (cli.ts's `program.action(runDefaultAction)`). With no `import` command
@@ -19,7 +19,7 @@ import type { Command } from 'commander';
  */
 export declare function registerRetiredImportCommand(program: Command): void;
 /**
- * The `connect` group (ALI-951). With no source and no `--all` it is the local picker
+ * The `connect` group. With no source and no `--all` it is the local picker
  * (connect.ts); `connect <source>` runs that source's import; `--all` and a cloud env take
  * the cloud scan below. `import` no longer reaches any of it - it is the retirement stub
  * above, which exits 2 - so this group is the only live spelling.

package/dist/commands/import.js

@@ -176,7 +176,7 @@ function scopeFlagsOf(o) {
     return flags;
 }
 /**
- * ALI-951: `import` was retired in 0.40.0, and a RETIRED command still has to exist.
+ * `import` was retired in 0.40.0, and a RETIRED command still has to exist.
  *
  * Deleting the alias outright is not the end state, because `align` has a default action for a
  * free-text question (cli.ts's `program.action(runDefaultAction)`). With no `import` command
@@ -205,7 +205,7 @@ export function registerRetiredImportCommand(program) {
     });
 }
 /**
- * The `connect` group (ALI-951). With no source and no `--all` it is the local picker
+ * The `connect` group. With no source and no `--all` it is the local picker
  * (connect.ts); `connect <source>` runs that source's import; `--all` and a cloud env take
  * the cloud scan below. `import` no longer reaches any of it - it is the retirement stub
  * above, which exits 2 - so this group is the only live spelling.

package/dist/commands/invite.d.ts

@@ -1,7 +1,7 @@
 /**
  * `align invite [email]` points an org admin at Settings > Team invites in the web app.
  *
- * It used to POST /admin/invites with the CLI's api_token (ALI-938). The gateway now refuses that
+ * It used to POST /admin/invites with the CLI's api_token. The gateway now refuses that
  * on purpose (requireAdminSurface): an agent's token must not add team members, so invites are
  * created in the browser by a signed-in admin. This command creates nothing and calls no invite
  * route. It prints the page and, for a person at a terminal, opens it with the allowlisted opener

package/dist/commands/invite.js

@@ -26,7 +26,7 @@ export function registerInviteCommand(program) {
             process.exit(1);
             return;
         }
-        // ALI-938: the demand signal survives the move to the browser. Fired without await:
+        // The demand signal survives the move to the browser. Fired without await:
         // telemetry must never delay or fail the command it rides on.
         void recordFunnelStage(env, 'teammate_requested', 'invite');
         const appUrl = await resolveInviteAppUrl(env, async (signal) => (await createGatewayClient(env).shareRequestsConfig(signal))?.appUrl ?? null);

package/dist/commands/invite.js.map

@@ -1 +1 @@
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+{"version":3,"file":"invite.js","sourceRoot":"","sources":["../../src/commands/invite.ts"],"names":[],"mappings":"AAaA,OAAO,KAAK,MAAM,OAAO,CAAC;AAC1B,OAAO,EAAE,iBAAiB,EAAgB,MAAM,kBAAkB,CAAC;AACnE,OAAO,EAAE,mBAAmB,EAAE,MAAM,0BAA0B,CAAC;AAC/D,OAAO,EAAE,iBAAiB,EAAE,mBAAmB,EAAE,MAAM,2BAA2B,CAAC;AACnF,OAAO,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AACnD,OAAO,EAAE,kBAAkB,EAAE,cAAc,EAAE,gBAAgB,EAAE,MAAM,0BAA0B,CAAC;AAChG,OAAO,EAAE,OAAO,EAAE,MAAM,yBAAyB,CAAC;AAClD,OAAO,EAAE,iBAAiB,EAAE,MAAM,2BAA2B,CAAC;AAE9D,MAAM,QAAQ,GAAG,4BAA4B,CAAC;AAE9C,MAAM,UAAU,qBAAqB,CAAC,OAAgB;IACpD,OAAO;SACJ,OAAO,CAAC,gBAAgB,CAAC;SACzB,WAAW,CAAC,2EAA2E,CAAC;SACxF,MAAM,CAAC,aAAa,EAAE,aAAa,CAAC;SACpC,MAAM,CAAC,KAAK,EAAE,KAAyB,EAAE,IAAuB,EAAE,EAAE;QACnE,IAAI,KAAK,KAAK,SAAS,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE,CAAC;YACjD,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC,QAAQ,OAAO,CAAC,KAAK,CAAC,yCAAyC,CAAC,CAAC,CAAC;YACxF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAChB,OAAO;QACT,CAAC;QAED,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACrC,MAAM,GAAG,GAAG,iBAAiB,EAAE,CAAC,cAAc,CAAC,OAAO,CAAC,CAAC;QACxD,IAAI,GAAG,CAAC,IAAI,KAAK,gBAAgB,EAAE,CAAC;YAClC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,MAAM,CAAC,2FAA2F,CAAC,CAAC,CAAC;YACvH,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC,sDAAsD,CAAC,CAAC,CAAC;YAC/E,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAChB,OAAO;QACT,CAAC;QAED,2EAA2E;QAC3E,8DAA8D;QAC9D,KAAK,iBAAiB,CAAC,GAAG,EAAE,oBAAoB,EAAE,QAAQ,CAAC,CAAC;QAE5D,MAAM,MAAM,GAAG,MAAM,mBAAmB,CAAC,GAAG,EAAE,KAAK,EAAE,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,mBAAmB,CAAC,GAAG,CAAC,CAAC,mBAAmB,CAAC,MAAM,CAAC,CAAC,EAAE,MAAM,IAAI,IAAI,CAAC,CAAC;QAC9I,MAAM,GAAG,GAAG,iBAAiB,CAAC,MAAM,CAAC,CAAC;QACtC,MAAM,GAAG,GAAG,KAAK,CAAC,CAAC,CAAC,cAAc,OAAO,CAAC,KAAK,CAAC,uBAAuB,CAAC,CAAC,CAAC,2CAA2C,CAAC;QACtH,OAAO,CAAC,GAAG,CAAC,0DAA0D,CAAC,CAAC;QACxE,OAAO,CAAC,GAAG,CAAC,+BAA+B,GAAG,GAAG,CAAC,CAAC;QACnD,OAAO,CAAC,GAAG,CAAC,OAAO,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,CAAC,CAAC;QAEjD,MAAM,EAAE,GAAG,kBAAkB,EAAE,CAAC;QAChC,IAAI,EAAE,CAAC,GAAG,CAAC,eAAe,CAAC,IAAI,CAAC,cAAc,CAAC,EAAE,EAAE,EAAE,CAAC,CAAC,IAAI;YAAE,OAAO;QACpE,IAAI,CAAC,CAAC,MAAM,gBAAgB,CAAC,GAAG,EAAE,MAAM,CAAC,CAAC;YAAE,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC,kEAAkE,CAAC,CAAC,CAAC;IACzI,CAAC,CAAC,CAAC;AACP,CAAC"}

package/dist/commands/local.js

@@ -26,7 +26,7 @@ export function registerLocalCommand(program) {
         const { dbPath } = await initLocalMode();
         s.stop('Local graph ready');
         // initLocalMode used to wire every detected agent's global MCP config from inside
-        // itself, without asking. This is the same wiring, asked for (ALI-776).
+        // itself, without asking. This is the same wiring, asked for.
         const { connectDetectedAgents } = await import('./connect-agents.js');
         await connectDetectedAgents('local');
         outro(`${chalk.green('Your local Align graph is ready.')}\n` +
@@ -45,7 +45,7 @@ export function registerLocalCommand(program) {
             return;
         }
         const db = createLocalDb(env.localDbPath ?? getLocalDbPath());
-        // ALI-796: same check as `align status` and `align local forget` - connected means
+        // Same check as `align status` and `align local forget` - connected means
         // local mode holds a saved token for it.
         const isConnected = (id) => config.getConnectorFields('local', id) !== null;
         const rollup = localValueRollup(db, isConnected);
@@ -203,7 +203,7 @@ export function registerLocalCommand(program) {
         }
         config.clearLocalMode();
         // "Reset config" has to include the saved read-only tokens, or the promise is false in
-        // exactly the way the setup copy used to be (ALI-802).
+        // exactly the way the setup copy used to be.
         config.forgetAllConnectors('local');
         console.log('Local graph wiped and saved tokens removed. Run `align local start` to reinitialize.');
     });

package/dist/commands/local.js.map

@@ -1 +1 @@
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package/dist/commands/mcp.d.ts

@@ -24,11 +24,11 @@ export declare function toolSchemasFor(env: EnvironmentConfig): typeof TOOL_SCHE
 export declare function serializeMcpResult(result: unknown): string;
 export declare function dispatchTool(name: string, args: Record<string, unknown> | undefined, client: ReturnType<typeof createGatewayClient>, env: EnvironmentConfig, createdBefore?: string, toolCtx?: MarkToolContext & Pick<ShareToolContext, 'share'>): Promise<unknown>;
 /**
- * ALI-949: did this tool call hand the agent a real answer from the graph? The three tools
+ * Did this tool call hand the agent a real answer from the graph? The three tools
  * an agent reaches for to GET something (ask, search, check) count; a non-empty conflicts
  * list or an impact graph does not - those are follow-ups, not the first useful decision.
  * A check whose status is `no-context` or `unknown` found nothing or could not run
- * (ALI-414: not a pass), so it is not useful either.
+ * (not a pass), so it is not useful either.
  */
 export declare function isFirstUsefulToolResult(name: string, result: unknown): boolean;
 /**
@@ -36,8 +36,8 @@ export declare function isFirstUsefulToolResult(name: string, result: unknown):
  * testable without standing up a Server (mcp-first-useful.test.ts). dispatchTool stays the
  * pure router; this is the one place a tool call has a side effect beyond its result.
  *
- * first_useful_decision fired only from a non-empty `align ask` before ALI-949, so an agent
- * asking through this server never counted - and the phases after that ticket exist to
+ * first_useful_decision fired only from a non-empty `align ask` at first, so an agent
+ * asking through this server never counted - and the phases after that exist to
  * make the agent the usual asker. The once-per-install guard is recordFunnelStage's, shared
  * with `align ask`; fired without await so the tool response never waits on telemetry.
  */

package/dist/commands/mcp.d.ts.map

@@ -1 +1 @@
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package/dist/commands/mcp.js

@@ -26,17 +26,17 @@ import { withDecisionRelationContract } from '../lib/decision-relations.js';
 import { withReasons } from '../lib/reason-extract.js';
 import { createAsOfGuard, filterAlignmentAsOf, filterConflictsAsOf, filterDecisionTimelineAsOf, filterImpactAsOf, filterTopicTimelineAsOf, notInGraphAsOf, } from '../lib/as-of.js';
 import { DECISION_RATIONALE_TOOL, DECISION_TIMELINE_TOOL, shapeDecisionRationale, shapeTopicTimeline, STORY_GATE, TOPIC_TIMELINE_TOOL, } from '../lib/mcp-timeline-tools.js';
-// Server-level instructions (ALI-120): surfaced to the agent so it reaches for Align
+// Server-level instructions: surfaced to the agent so it reaches for Align
 // proactively - without the user prompting - the moment this MCP server is connected.
 //
-// ONE text with the hosted server (ALI-952): the shared body lives in
+// ONE text with the hosted server: the shared body lives in
 // mcp-instructions.shared.ts, byte-identical to align-stack's copy and pinned by
 // mcp-instructions-parity.test.ts. This server only supplies its names for the shared
 // tokens, plus the per-server lines for tools whose NAME differs between the two servers.
 // Every tool it exposes is one the hosted server also has; the remaining hosted-only tools
 // (check_proposed_action, rate_conflict, coach) are appended on that side.
 //
-// ALI-1070 added the first per-server line here: this server now exposes the topic timeline,
+// The first per-server line here exists because this server exposes the topic timeline,
 // so it carries the hosted guidance sentence rendered with ITS name for the tool. That line
 // is CLOUD ONLY (see instructionsFor) because local mode has no implementation for it. The
 // graph-identity suffix is also added per environment by instructionsFor, and the whole
@@ -116,7 +116,7 @@ export function instructionsFor(env) {
  */
 export function toolSchemasFor(env) {
     const local = env.mode === 'local-embedded';
-    // ALI-1063 follow-up: local-embedded search reports a decision as superseded only when a
+    // Local-embedded search reports a decision as superseded only when a
     // supersedes link exists (one a person recorded with `align mark ... replaces`, or a typed
     // link); most decisions have none. Rather than staying silent about that gap, tell the agent
     // what to do instead: when two results cover the
@@ -129,7 +129,7 @@ export function toolSchemasFor(env) {
             'created_at. That is a heuristic, not a verified status.'
         : ` Searches the hosted Align graph at ${env.gatewayUrl}.`;
     /**
-     * ALI-1070 follow-up: the two tools local mode cannot serve say so.
+     * The two tools local mode cannot serve say so.
      *
      * They stay REGISTERED - deregistering per mode is a larger change and the Proxy stub is
      * honest when reached. What was missing is any way for an agent reading descriptions to know
@@ -179,11 +179,11 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
         throw new Error(`${name} requires ${names}. Call it again with ${missing.length > 1 ? 'those arguments' : 'that argument'} ` +
             'set to a non-empty value.');
     }
-    // ALI-1420: a frozen run must never write a decision into the graph, or the next frozen run
+    // A frozen run must never write a decision into the graph, or the next frozen run
     // (or the live graph) would see a decision the run invented. align_capture is the one tool
     // that does. Scoped to decisions on purpose: align_check_drift and align_check_alignment stay
     // available, and both send the cutoff so the gateway records no check event or drift row for
-    // them (ALI-1429, ALI-1438).
+    // them.
     if (createdBefore && (name === 'align_capture' || name === BACKFILL_TOOL || name === MARK_TOOL || name === SHARE_TOOL || name === SHARE_STATUS_TOOL || (name === SYNC_TOOL && args?.['action'] === 'run'))) {
         throw new Error(name === 'align_capture'
             ? `align_capture adds a decision to the graph, and this server is frozen as of ${createdBefore}, ` +
@@ -195,7 +195,7 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
     if (createdBefore && name === SCOPE_TOOL && args?.['action'] === 'set') {
         throw new Error(`${SCOPE_TOOL} changes what the graph imports, and this server is frozen as of ${createdBefore}, so it never changes scope. Restart align mcp without --created-before to use it.`);
     }
-    // ALI-1411: every READ tool honours the as-of cutoff, not just the three built on
+    // Every READ tool honours the as-of cutoff, not just the three built on
     // searchDecisions. Only smart-search and the decision-links cursor bound it server-side;
     // the rest are filtered by lib/as-of.ts, which says what that cannot cover. With no cutoff
     // the guard is never built, so every arm below calls and returns exactly what it did before.
@@ -203,12 +203,12 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
         ? createAsOfGuard(createdBefore, (id) => client.getDecision(id))
         : undefined;
     switch (name) {
-        // ONE arm for both names (ALI-952). align_search is the alias of align_ask: they were two
+        // ONE arm for both names. align_search is the alias of align_ask: they were two
         // entries for the same gateway call with two dispatch arms that had already drifted
         // (align_search passed no limit, align_ask defaulted to 8). The question is passed
         // through unchanged so the gateway's smart-search strategy selector can route it to
-        // semantic search (ALI-105); align_search's `query` is the same text under the old name.
-        // ALI-1066/ALI-1092: the relation context the gateway attaches to a non-active hit
+        // semantic search; align_search's `query` is the same text under the old name.
+        // The relation context the gateway attaches to a non-active hit
         // (`successor`, `conflicts_with`) reaches the agent through this arm. It already did -
         // serializeMcpResult is a denylist, so an unrecognised field passes through - and what
         // withDecisionRelationContract adds is that a NULL never does. `"conflicts_with":null`
@@ -258,11 +258,11 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
         // L9: an agent can ASK for a share (a browser approval link, or an older one-time code); it never sends (share-tool.ts).
         case SHARE_TOOL:
             return runShareTool(args, env, toolCtx);
-        // ALI-1540: completes a request the gateway says the PERSON approved, once; otherwise read-only (share-status-tool.ts).
+        // Completes a request the gateway says the PERSON approved, once; otherwise read-only (share-status-tool.ts).
         case SHARE_STATUS_TOOL:
             return runShareStatusTool(args, env, toolCtx);
         case 'align_check_alignment': {
-            // ALI-1420: the gateway bounds retrieval by the cutoff; the filter stays as a backstop for a
+            // The gateway bounds retrieval by the cutoff; the filter stays as a backstop for a
             // gateway that predates the parameter. No cutoff keeps the two-argument call.
             const result = asOf
                 ? await client.checkAlignment(args?.['diff'], args?.['context'], {
@@ -275,7 +275,7 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
             // Drift against a decision that did not exist yet is not an as-of answer.
             if (asOf)
                 await asOf.assertDecision(args?.['decision_id']);
-            // ALI-1438: the cutoff tells the gateway not to store a drift-check row. No cutoff keeps
+            // The cutoff tells the gateway not to store a drift-check row. No cutoff keeps
             // the three-argument call.
             return asOf
                 ? client.checkDrift(args?.['decision_id'], args?.['content'], args?.['source_type'], asOf.cutoff)
@@ -299,7 +299,7 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
         case 'align_get_related_decisions':
             return withDecisionRelationContract(await client.searchDecisions(`${args?.['file_path']} ${args?.['context'] ?? ''}`, 5, createdBefore));
         /**
-         * ALI-1070. The gateway already returns the whole story structure; what this arm adds is
+         * The gateway already returns the whole story structure; what this arm adds is
          * the projection and the RENDERING CONTRACT (mcp-timeline-tools.ts). Rows without the
          * contract give a customer the data and not the ability to tell a supersession from a
          * correction, which is the AlignBench split this port is measured on - so the shaping is
@@ -344,11 +344,11 @@ export async function dispatchTool(name, args, client, env, createdBefore, toolC
     }
 }
 /**
- * ALI-949: did this tool call hand the agent a real answer from the graph? The three tools
+ * Did this tool call hand the agent a real answer from the graph? The three tools
  * an agent reaches for to GET something (ask, search, check) count; a non-empty conflicts
  * list or an impact graph does not - those are follow-ups, not the first useful decision.
  * A check whose status is `no-context` or `unknown` found nothing or could not run
- * (ALI-414: not a pass), so it is not useful either.
+ * (not a pass), so it is not useful either.
  */
 export function isFirstUsefulToolResult(name, result) {
     if (name === 'align_ask' || name === 'align_search') {
@@ -366,8 +366,8 @@ export function isFirstUsefulToolResult(name, result) {
  * testable without standing up a Server (mcp-first-useful.test.ts). dispatchTool stays the
  * pure router; this is the one place a tool call has a side effect beyond its result.
  *
- * first_useful_decision fired only from a non-empty `align ask` before ALI-949, so an agent
- * asking through this server never counted - and the phases after that ticket exist to
+ * first_useful_decision fired only from a non-empty `align ask` at first, so an agent
+ * asking through this server never counted - and the phases after that exist to
  * make the agent the usual asker. The once-per-install guard is recordFunnelStage's, shared
  * with `align ask`; fired without await so the tool response never waits on telemetry.
  */
@@ -382,7 +382,7 @@ export function createCallToolHandler(client, env, createdBefore, ctx = {}) {
             result = await dispatchTool(name, args, client, env, createdBefore, { clientInfo, judge: ctx.judge });
         }
         catch (err) {
-            // ALI-1494: the opt-in local call log (ALIGN_LLM_TRACE_FILE). A no-op when unset.
+            // The opt-in local call log (ALIGN_LLM_TRACE_FILE). A no-op when unset.
             appendChatTrace({
                 kind: 'mcp_call', tool: name, args, client: clientInfo ?? null, ok: false,
                 error: err instanceof Error ? err.message : String(err), durationMs: Date.now() - startedAt,
@@ -408,12 +408,11 @@ export function createCallToolHandler(client, env, createdBefore, ctx = {}) {
 export function wireCallTool(server, client, env, createdBefore, judge) {
     server.setRequestHandler(CallToolRequestSchema, createCallToolHandler(client, env, createdBefore, { clientInfo: () => server.getClientVersion(), judge }));
 }
-// Order is the ranking an agent reads off tools/list, so the pre-flight check leads (ALI-139,
-// prescription over retrieval; ALI-952 moved it here from fourth). The hosted server
+// Order is the ranking an agent reads off tools/list, so the pre-flight check leads (prescription over retrieval; it moved here from fourth). The hosted server
 // (align-stack mcpServer.ts) registers check_alignment first for the same reason.
 /**
- * Tool annotations, mirroring connectors/mcp-align/src/mcpServer.ts's canonical vocabulary
- * (ALI-326 there, ALI-1063 here). A client cannot tell `align_ask` from `align_capture`
+ * Tool annotations, mirroring connectors/mcp-align/src/mcpServer.ts's canonical vocabulary.
+ * A client cannot tell `align_ask` from `align_capture`
  * without these, and the one consumer that most needs to - AlignBench's align arm, which
  * runs under the Claude Agent SDK with permissions bypassed and no MCP gating on
  * `allowedTools` - would otherwise have to hardcode which tools write. A hardcoded list
@@ -525,10 +524,10 @@ export const TOOL_SCHEMAS = [
         },
     },
     /**
-     * ALI-1070: the timeline trio, ported from the hosted server (mcp-align).
+     * The timeline trio, ported from the hosted server (mcp-align).
      *
      * APPENDED rather than ranked high on purpose. Order is the ranking an agent reads off
-     * tools/list, and the existing eight encode ALI-139's "prescription over retrieval"
+     * tools/list, and the existing eight encode the "prescription over retrieval"
      * decision with the pre-flight check leading. Re-ranking that is a separate product call;
      * the lever for routing an agent to the timeline tool is the instructions line above,
      * which names it for exactly the questions it answers.
@@ -588,11 +587,11 @@ export const TOOL_SCHEMAS = [
     MARK_TOOL_SCHEMA,
     // L9: appended after align_mark.
     SHARE_TOOL_SCHEMA,
-    // ALI-1540: appended after align_share.
+    // Appended after align_share.
     SHARE_STATUS_TOOL_SCHEMA,
 ];
 /**
- * ALI-1082/ALI-1087: --created-before is a harness/audit-only bound (AlignBench's align arm
+ * --created-before is a harness/audit-only bound (AlignBench's align arm
  * passes it so it cannot see decisions the graph captured after a corpus item's frozen
  * `asOf`), and every deployment mode - cloud, self-host, and true local-embedded - carries
  * the same as-of correctness guarantee. Fail closed at startup rather than silently
@@ -606,7 +605,7 @@ export const TOOL_SCHEMAS = [
  *   comparison against SQLite's `created_at`) resolve a date-only literal against the
  *   session TimeZone.
  *
- * ALI-1087 removed the local-embedded rejection that used to sit here: "there is no cutoff
+ * The local-embedded rejection that used to sit here is gone: "there is no cutoff
  * concept locally" described the implementation of the day, not a reason. The local graph
  * stores every decision and edge with a real `created_at`, so `createLocalGatewayClient`
  * now honours the bound the same way the cloud query does (see its `searchDecisions` and
@@ -654,7 +653,7 @@ export function registerMcpCommand(program) {
         .option('--install', 'Configure agents - alias for --setup')
         .option('--remove', 'Remove Align from your agents\' MCP config')
         .option('--created-before <iso>', 'Hide decisions captured at or after this ISO-8601 instant (benchmark/audit use)')
-        // Rendered, not spelled (ALI-1135): help text is copied by hand, and on Windows the bare
+        // Rendered, not spelled: help text is copied by hand, and on Windows the bare
         // `align` is the align.cmd shim a client cannot spawn.
         .addHelpText('after', `
 Claude Code config (~/.claude.json or workspace .mcp.json):
@@ -681,7 +680,7 @@ Claude Code config (~/.claude.json or workspace .mcp.json):
         const resolvedEnv = resolveEnv(opts.env, { preferLocalEmbedded: true });
         const env = config.getEnvironment(resolvedEnv);
         const client = createGatewayClient(env);
-        // ALI-1082: fail closed BEFORE the server ever connects - a bound that silently does
+        // Fail closed BEFORE the server ever connects - a bound that silently does
         // nothing is worse than no bound.
         if (opts.createdBefore !== undefined) {
             validateCreatedBeforeFlag(opts.createdBefore, env);
@@ -690,12 +689,12 @@ Claude Code config (~/.claude.json or workspace .mcp.json):
         server.setRequestHandler(ListToolsRequestSchema, async () => ({ tools: toolSchemasFor(env) }));
         wireCallTool(server, client, env, opts.createdBefore);
         // MCP protocol requires clean stdout; log startup to stderr
-        // ALI-1082: the cutoff is named in the banner whenever one is set, so a benchmark
+        // The cutoff is named in the banner whenever one is set, so a benchmark
         // run's own transcript records that the bound was active - a bound nobody can see in
         // the log is a bound nobody can audit afterwards.
         const createdBeforeSuffix = opts.createdBefore !== undefined ? `, created-before: ${opts.createdBefore}` : '';
         process.stderr.write(`align mcp server started (env: ${resolvedEnv}, gateway: ${env.gatewayUrl}${createdBeforeSuffix})\n`);
-        // ALI-938: a URL asks someone to go figure it out later; the invite command is
+        // A URL asks someone to go figure it out later; the invite command is
         // something they can act on right there. See invite-prompt.ts.
         process.stderr.write(`${inviteNudgeLine('value')}\n`);
         const transport = new StdioServerTransport();
@@ -703,7 +702,7 @@ Claude Code config (~/.claude.json or workspace .mcp.json):
     });
 }
 /**
- * The undo for the automatic wiring setup does (ALI-776).
+ * The undo for the automatic wiring setup does.
  *
  * Setup connects detected agents without asking, which is only defensible because the write
  * is additive and reversible. This is that reversibility, and it needs to be one command -
@@ -745,7 +744,7 @@ async function runMcpSetup(env) {
     p.intro(commandIntro('align mcp --setup'));
     const editors = detectEditors();
     if (!editors.length) {
-        // Rendered from alignServerEntry rather than hand-built (ALI-1135). This branch used to
+        // Rendered from alignServerEntry rather than hand-built. This branch used to
         // spell `"command": "align"` itself, which is the one thing a Windows client cannot
         // spawn - and this is the branch that hands the config to a HUMAN to paste, so a wrong
         // one here is copied by hand into the file we were not allowed to write.