@aligndottech/cli 0.57.1 → 0.58.0

package/dist/lib/local-db.d.ts

@@ -431,6 +431,19 @@ export declare function createLocalDb(dbPath: string): {
     isSuperseded(decisionId: string): boolean;
     getStats(): DbStats;
     dropAll(): void;
+    /**
+     * ALI-1749: run `fn` with `synchronous = NORMAL`. In WAL mode the default (FULL) syncs the log on
+     * every commit, and an import commits about six statements per item: a CPU profile of a
+     * 1,000-commit git import put 28 of its 39 seconds in those commits, not in the embedding model.
+     * NORMAL syncs at checkpoints instead. The file cannot corrupt either way; what NORMAL risks is
+     * the last few commits if the OS itself (not this process) dies, and a connector import can be
+     * re-run. Used by connector imports only, never by a capture a person made by hand, and put
+     * back to FULL afterwards. Each commit stays its own, so the crash-and-retry contract of
+     * ingestOne (embedding stored, enriched_at last) and other connections' writes are unchanged.
+     */
+    withRelaxedSync<T>(fn: () => Promise<T>): Promise<T>;
+    /** `PRAGMA synchronous` of this connection: 2 is FULL, 1 is NORMAL. Read by the test of withRelaxedSync. */
+    syncMode(): number;
     /** Goes up whenever a decision is deleted or re-id'd or an embedding is deleted or replaced
      *  on this connection (see local-db-epoch.ts). A holder of a copy of the embeddings
      *  compares it to the value it built at. */

package/dist/lib/local-db.d.ts.map

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package/dist/lib/local-db.js

@@ -696,6 +696,29 @@ export function createLocalDb(dbPath) {
             bumpRowSetEpoch(db);
             db.exec(`DELETE FROM decision_refs; DELETE FROM decision_links; DELETE FROM decision_embeddings; DELETE FROM decisions;`);
         },
+        /**
+         * ALI-1749: run `fn` with `synchronous = NORMAL`. In WAL mode the default (FULL) syncs the log on
+         * every commit, and an import commits about six statements per item: a CPU profile of a
+         * 1,000-commit git import put 28 of its 39 seconds in those commits, not in the embedding model.
+         * NORMAL syncs at checkpoints instead. The file cannot corrupt either way; what NORMAL risks is
+         * the last few commits if the OS itself (not this process) dies, and a connector import can be
+         * re-run. Used by connector imports only, never by a capture a person made by hand, and put
+         * back to FULL afterwards. Each commit stays its own, so the crash-and-retry contract of
+         * ingestOne (embedding stored, enriched_at last) and other connections' writes are unchanged.
+         */
+        async withRelaxedSync(fn) {
+            db.exec('PRAGMA synchronous = NORMAL');
+            try {
+                return await fn();
+            }
+            finally {
+                db.exec('PRAGMA synchronous = FULL');
+            }
+        },
+        /** `PRAGMA synchronous` of this connection: 2 is FULL, 1 is NORMAL. Read by the test of withRelaxedSync. */
+        syncMode() {
+            return db.prepare('PRAGMA synchronous').get().synchronous;
+        },
         /** Goes up whenever a decision is deleted or re-id'd or an embedding is deleted or replaced
          *  on this connection (see local-db-epoch.ts). A holder of a copy of the embeddings
          *  compares it to the value it built at. */

package/dist/lib/local-db.js.map

@@ -1 +1 @@
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package/dist/lib/local-embeddings-native.d.ts

@@ -0,0 +1,17 @@
+import { Tokenizer } from '@huggingface/tokenizers';
+import { type EnsureOptions } from './embedding-runtime.js';
+export type EmbeddingPipeline = (text: string, options: Record<string, unknown>) => Promise<Array<{
+    data: Float32Array;
+}>>;
+export interface SessionLike {
+    inputNames: readonly string[];
+    outputNames: readonly string[];
+    run(feeds: Record<string, unknown>): Promise<Record<string, {
+        data: Float32Array | ArrayLike<number>;
+    }>>;
+}
+/** Pure pipeline body, separated so the tokenizing, truncation and pooling are testable without
+ *  a native runtime. */
+export declare function buildPipeline(tokenizer: Pick<Tokenizer, 'encode'>, session: SessionLike, makeInt64: (data: BigInt64Array, dims: number[]) => unknown): EmbeddingPipeline;
+export declare function createNativeEmbeddingPipeline(opts?: Partial<EnsureOptions>): Promise<EmbeddingPipeline>;
+//# sourceMappingURL=local-embeddings-native.d.ts.map

package/dist/lib/local-embeddings-native.d.ts.map

@@ -0,0 +1 @@
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package/dist/lib/local-embeddings-native.js

@@ -0,0 +1,78 @@
+/**
+ * The npm distribution's embedding backend (ALI-1781): the same model, the same weights and the
+ * same arithmetic transformers.js ran, without transformers.js.
+ *
+ * transformers.js was only ever glue here - tokenize, run one ONNX graph, mean-pool, normalise -
+ * and its dependency tree was the 779MB. This does those four steps directly over the downloaded
+ * native runtime (embedding-runtime.ts) and `@huggingface/tokenizers`, the same tokenizer
+ * transformers.js 4 uses. Vectors are held to cosine >= 0.9999 against transformers.js on a fixed
+ * corpus by scripts/verify-embedding-parity.mjs.
+ *
+ * Three behaviours are copied from transformers.js ON PURPOSE, because stored vectors depend on
+ * them and each looks like a bug to a reader:
+ *  - Truncation is a plain `slice(0, 512)`. The trailing [SEP] is NOT restored, so a long text
+ *    ends mid-sentence in token space. Restoring it is the "obviously correct" fix and moves
+ *    cosine to 0.99 on long commit messages.
+ *  - All three int64 inputs are fed, with token_type_ids all zero.
+ *  - The ONNX graph runs at the default optimisation level ('all'). The q8 model's dynamic
+ *    quantisation is sensitive to fusion: 'disabled' or 'basic' moves cosine by up to 6e-03.
+ */
+import { readFileSync } from 'node:fs';
+import { join } from 'node:path';
+import { Tokenizer } from '@huggingface/tokenizers';
+import { ensureModel, ensureRuntime, loadOrt } from './embedding-runtime.js';
+import { inHookContext } from './hook-context.js';
+const MAX_TOKENS = 512;
+const DIMS = 384;
+/** Pure pipeline body, separated so the tokenizing, truncation and pooling are testable without
+ *  a native runtime. */
+export function buildPipeline(tokenizer, session, makeInt64) {
+    return async (text) => {
+        const enc = tokenizer.encode(text);
+        const ids = enc.ids.slice(0, MAX_TOKENS);
+        const mask = enc.attention_mask.slice(0, MAX_TOKENS);
+        const n = ids.length;
+        const dims = [1, n];
+        const feeds = {
+            input_ids: makeInt64(BigInt64Array.from(ids, BigInt), dims),
+            attention_mask: makeInt64(BigInt64Array.from(mask, BigInt), dims),
+            token_type_ids: makeInt64(new BigInt64Array(n), dims),
+        };
+        const result = await session.run(feeds);
+        const hidden = result[session.outputNames[0]].data;
+        const pooled = new Float32Array(DIMS);
+        let count = 0;
+        for (let i = 0; i < n; i++) {
+            if (!mask[i])
+                continue;
+            count++;
+            for (let j = 0; j < DIMS; j++)
+                pooled[j] += hidden[i * DIMS + j];
+        }
+        if (count === 0)
+            throw new Error('tokenizer produced no attended tokens');
+        let norm = 0;
+        for (let j = 0; j < DIMS; j++) {
+            pooled[j] = pooled[j] / count;
+            norm += pooled[j] * pooled[j];
+        }
+        norm = Math.sqrt(norm);
+        for (let j = 0; j < DIMS; j++)
+            pooled[j] = pooled[j] / norm;
+        return [{ data: pooled }];
+    };
+}
+export async function createNativeEmbeddingPipeline(opts = {}) {
+    const ensure = {
+        // A hook runs on every edit and must never wait on a 20MB download (embedding-runtime.ts).
+        allowDownload: !inHookContext(),
+        notice: (m) => process.stderr.write(`${m}\n`),
+        ...opts,
+    };
+    const [runtime, model] = [await ensureRuntime(ensure), await ensureModel(ensure)];
+    const ort = loadOrt(runtime);
+    const tokenizer = new Tokenizer(JSON.parse(readFileSync(join(model, 'tokenizer.json'), 'utf8')), JSON.parse(readFileSync(join(model, 'tokenizer_config.json'), 'utf8')));
+    const session = await ort.InferenceSession.create(join(model, 'onnx', 'model_quantized.onnx'), { executionProviders: ['cpu'] });
+    return buildPipeline(tokenizer, session, (data, dims) => new ort.Tensor('int64', data, dims));
+}
+//# sourceMappingURL=local-embeddings-native.js.map

package/dist/lib/local-embeddings-native.js.map

@@ -0,0 +1 @@
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package/dist/lib/local-embeddings.d.ts.map

@@ -1 +1 @@
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package/dist/lib/local-embeddings.js

@@ -18,17 +18,34 @@ let _pipe = null;
 let _backend = null;
 export function setEmbeddingBackend(backend) {
     _backend = backend;
-    _pipe = null; // a backend swapped after first use must not keep serving the old pipeline
+    _pipe = null;
+    _loading = null; // a backend swapped after first use must not keep serving the old pipeline
 }
 /** Test seam. Not for production paths - the binary registers exactly once, at startup. */
 export function resetEmbeddingBackend() {
     _backend = null;
     _pipe = null;
+    _loading = null;
+}
+let _loading = null;
+/** One setup in flight at a time: concurrent first calls (ingest runs several) must share one
+ *  download and one ORT session, not each start their own. A failure is not remembered. */
+async function pipeline() {
+    if (_pipe)
+        return _pipe;
+    _loading ??= setupPipeline().then((p) => { _pipe = p; return p; }).finally(() => { _loading = null; });
+    return _loading;
 }
 export async function getEmbedding(text) {
-    if (!_pipe && _backend) {
+    const pipe = await pipeline();
+    const output = await pipe(text, { pooling: 'mean', normalize: true });
+    return output[0].data;
+}
+async function setupPipeline() {
+    let built = null;
+    if (!built && _backend) {
         try {
-            _pipe = await _backend();
+            built = await _backend();
         }
         catch (err) {
             // Wrapped, because an unwrapped failure here reaches the user as a raw ORT or fetch
@@ -38,56 +55,38 @@ export async function getEmbedding(text) {
                 `connection or proxy and try again. (${err.message})`);
         }
     }
-    if (!_pipe) {
-        let mod;
-        try {
-            // @huggingface/transformers is an optionalDependency - its native deps (sharp,
-            // onnxruntime) can fail to install on Alpine/ARM/behind a proxy. If it's
-            // missing, point the user at cloud mode rather than a raw "Cannot find module".
-            //
-            // The specifier is a variable ON PURPOSE: a literal makes tsc resolve the
-            // module at typecheck time, so `npm run typecheck` fails with TS2307 on any
-            // machine where the OPTIONAL install was skipped - which npm does silently
-            // (a CI run installed 398 packages where its sibling installed 438, and the
-            // only trace was the red typecheck). An optional dep must be optional to
-            // the typechecker too.
-            const HF_TRANSFORMERS = '@huggingface/transformers';
-            mod = (await import(HF_TRANSFORMERS));
-        }
-        catch (err) {
-            // Two different situations produce the same failure here, and the npm advice is
-            // unfollowable for someone who downloaded a binary: there is no package for them
-            // to reinstall (ALI-740). The binary carries no node_modules at all, because
-            // onnxruntime-node is a native addon PLUS sibling shared libraries it dlopens
-            // itself, which `bun build --compile` cannot embed.
-            const base = 'Local mode needs the on-device embedding model (@huggingface/transformers), ';
-            const cause = `(${err.message})`;
-            const advice = alignDistribution() === 'binary'
-                ? 'and the standalone binary did not register its bundled WASM backend. That is a build defect rather than a limit of your machine - please report it. Cloud mode (`align login`) works meanwhile.'
-                : 'which is not installed on this platform. Use cloud mode (`align login`), or reinstall on a supported platform (macOS, glibc Linux, or Windows x64/arm64).';
-            throw new Error(`${base}${advice} ${cause}`);
+    if (!built) {
+        if (alignDistribution() === 'binary') {
+            // The binary registers its bundled WASM backend at startup (index.bun.ts). Reaching this
+            // line means that registration did not happen: a build defect, and the npm advice
+            // ("reinstall on a supported platform") is unfollowable for someone with no package.
+            throw new Error('Local mode needs the on-device embedding model, and the standalone binary did not register its bundled WASM backend. ' +
+                'That is a build defect rather than a limit of your machine - please report it. Cloud mode (`align login`) works meanwhile.');
         }
+        // Dynamic: the tokenizer and runtime loader stay off the launch path of every command that
+        // never embeds (and `align --version`, the hook's stdin parse, ...).
+        const { EmbeddingAssetsMissing } = await import('./embedding-runtime.js');
         try {
-            // First call downloads ~23MB from the Hugging Face Hub (huggingface.co), then caches.
-            // dtype 'q8' is load-bearing, not a perf tweak: @xenova/transformers@2 loaded
-            // quantized weights by default and v3+ default to fp32, which shifts pairwise
-            // cosine by up to 2.3e-02 against vectors already persisted in a user's local
-            // graph. Pinning q8 holds that to 6.6e-04. See local-embeddings-dtype.test.ts.
-            // The size follows from that pin: q8 fetches onnx/model_quantized.onnx (22.0MiB) plus
-            // the tokenizer, where fp32 would be 86.2MiB. This comment and the copy in setup.ts
-            // and README.md said "~90MB" for both, quoting the file the pin exists to avoid.
-            _pipe = (await mod.pipeline('feature-extraction', EMBEDDING_MODEL_ID, {
-                dtype: EMBEDDING_DTYPE,
-            }));
+            const { createNativeEmbeddingPipeline } = await import('./local-embeddings-native.js');
+            // ALI-1781: the npm package no longer depends on @huggingface/transformers. The native
+            // runtime for this os/arch and the model files are fetched once, digest-checked, into the
+            // user cache dir (embedding-runtime.ts), then everything runs offline.
+            built = await createNativeEmbeddingPipeline();
         }
         catch (err) {
-            throw new Error('Could not load the local embedding model (~23MB, Xenova/all-MiniLM-L6-v2, from huggingface.co). ' +
-                'Check your internet connection or proxy and try again. ' +
-                `(${err.message})`);
+            if (err instanceof EmbeddingAssetsMissing) {
+                throw new Error(err.reason === 'unsupported-platform'
+                    ? `Local mode needs the on-device embedding runtime, which is not available on this platform. Use cloud mode (\`align login\`), or reinstall on a supported platform (macOS arm64, glibc Linux, or Windows x64/arm64). (${err.message})`
+                    : err.message);
+            }
+            // Wrapped, because an unwrapped failure here reaches the user as a raw fetch or dlopen
+            // error. The common cause is the one-time download, so say that and where it came from.
+            throw new Error('Could not set up the on-device embedding model (~23MB model, ~20MB runtime, downloaded once from ' +
+                'github.com and huggingface.co, then cached). Check your internet connection or proxy and try again. ' +
+                `Cloud mode (\`align login\`) works meanwhile. (${err.message})`);
         }
     }
-    const output = await _pipe(text, { pooling: 'mean', normalize: true });
-    return output[0].data;
+    return built;
 }
 export function cosineSimilarity(a, b) {
     // Loudly, because the silent version is worse than a crash: this loop indexes `b[i]` over

package/dist/lib/local-embeddings.js.map

@@ -1 +1 @@
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package/dist/lib/local-gateway-client.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"local-gateway-client.d.ts","sourceRoot":"","sources":["../../src/lib/local-gateway-client.ts"],"names":[],"mappings":"AAAA,OAAO,EAAuC,KAAK,OAAO,EAAsB,MAAM,eAAe,CAAC;AAgBtG,OAAO,EAA8F,KAAK,cAAc,EAAE,KAAK,iBAAiB,EAAE,MAAM,mBAAmB,CAAC;AAI5K,OAAO,KAAK,EAAE,eAAe,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AAC1E,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAOnD,OAAO,EACL,eAAe,EAAE,aAAa,EAAE,aAAa,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,eAAe,EACrG,2BAA2B,EAAE,gBAAgB,EAAE,oBAAoB,EACpE,MAAM,uBAAuB,CAAC;AAE/B,OAAO,EACL,eAAe,EAAE,aAAa,EAAE,aAAa,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,eAAe,EACrG,2BAA2B,EAAE,gBAAgB,EAAE,oBAAoB,GACpE,CAAC;AACF,OAAO,EAAE,sBAAsB,EAAE,MAAM,mBAAmB,CAAC;AAE3D,KAAK,SAAS,GAAG;IAAE,KAAK,CAAC,EAAE,UAAU,CAAC;IAAC,KAAK,CAAC,EAAE,MAAM,CAAA;CAAE,CAAC;AAExD,wBAAgB,wBAAwB,CAAC,MAAM,EAAE,MAAM,EAAE,UAAU,GAAE;IAAE,GAAG,CAAC,EAAE,MAAM,CAAC;IAAC,aAAa,CAAC,EAAE,MAAM,CAAC;IAAC,OAAO,CAAC,EAAE,MAAM,CAAA;CAAO;IA2UhI,2FAA2F;;;;;;;2BAS9D,MAAM;;;;;;;;;;;;;uBAgBV,cAAc,EAAE,SAAQ,iBAAiB;;;;;;;;;;;;;;;;;IAqClE;;;;;;;OAOG;2BAC0B,KAAK,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,OAAO,CAAC;QAAC,OAAO,CAAC,EAAE,OAAO,CAAA;KAAE,CAAC,GAAG,OAAO,CAAC;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAA;KAAE,CAAC;IAuBtJ;;;;;;;;OAQG;iCAEK;QAAE,UAAU,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,UAAU,CAAC,EAAE,MAAM,CAAA;KAAE,eACrE,MAAM,GAClB,OAAO,CAAC;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,WAAW,EAAE,MAAM,CAAC;QAAC,WAAW,EAAE,MAAM,CAAA;KAAE,CAAC;IAcnF;;;;;;;;;;;;;;;OAeG;oBACmB,MAAM;;;;;gBAeV,OAAO,EAAE;;;;;;;;;;;;;2BAWjB;QAAE,KAAK,CAAC,EAAE,MAAM,CAAC;QAAC,IAAI,CAAC,EAAE,MAAM,CAAC;QAAC,GAAG,CAAC,EAAE,OAAO,CAAC;QAAC,UAAU,CAAC,EAAE,OAAO,CAAC;QAAC,MAAM,CAAC,EAAE,MAAM,CAAA;KAAE;iBAlWxF,YAAY,GAAG,YAAY;oBACxB;YAAE,EAAE,EAAE,MAAM,CAAC;YAAC,KAAK,EAAE,MAAM,CAAC;YAAC,UAAU,CAAC,EAAE,MAAM,CAAC;YAAC,QAAQ,EAAE,MAAM,CAAA;SAAE;yBAC/D;YAAE,EAAE,EAAE,MAAM,CAAC;YAAC,KAAK,EAAE,MAAM,CAAC;YAAC,UAAU,CAAC,EAAE,MAAM,CAAC;YAAC,QAAQ,EAAE,MAAM,CAAA;SAAE;;;;;;;;;;;;;;IAiYrF;;;;;;;;;OASG;uBACsB,MAAM,QAAQ;QAAE,UAAU,EAAE,MAAM,CAAA;KAAE;;;;;IAsB7D;;;;;;;;OAQG;2BAEM,MAAM,kCAEG,MAAM,UACd;QAAE,IAAI,CAAC,EAAE,MAAM,CAAC;QAAC,GAAG,CAAC,EAAE,OAAO,CAAA;KAAE,GACvC,OAAO,CAAC,aAAa,CAAC;yBAgEjB,MAAM,aACD,MAAM,SAMX,SAAS,GACd,OAAO,CAAC,eAAe,CAAC;2BAgLE,MAAM,WAAW,MAAM,gBAAgB,MAAM,mBAAmB,MAAM;;;;;;;;;;;0BAwBvE,MAAM;;;;;;;;EAqBrC;AAED,MAAM,MAAM,kBAAkB,GAAG,UAAU,CAAC,OAAO,wBAAwB,CAAC,CAAC"}

package/dist/lib/local-gateway-client.js

@@ -356,33 +356,39 @@ export function createLocalGatewayClient(dbPath, clientOpts = {}) {
             };
         },
         async ingestBatch(items, opts = {}) {
-            const snapshots = [];
             const session = {};
-            for (const item of items) {
-                const r = await ingestOne(item.raw_text, item.platform ?? 'cli', {
-                    titleOverride: item.title,
-                    sourceUrlOverride: item.source_url ?? null,
-                    createdAt: item.created_at,
-                    classify: opts.classify, keyed: opts.keyed, detailPending: item.detail_pending,
-                }, session);
-                snapshots.push({
-                    id: r.id,
-                    created: r.created,
-                    changed: r.changed,
-                    title: r.title,
-                    summary: r.summary,
-                    analysis: {
-                        relatedDecisions: r.related.map(c => ({
-                            id: c.decisionId,
-                            title: db.getDecisionById(c.decisionId)?.title ?? '',
-                            // Must match the relation actually written above, or this is a second writer
-                            // of the same fact that can drift from it (ALI-503).
-                            relationship: 'relates',
-                            confidence: c.score,
-                        })),
-                    },
-                });
-            }
+            // A connector import (classify: false) can be re-run, so it trades the per-commit sync for
+            // speed (see withRelaxedSync). A capture a person made by hand keeps the default.
+            const run = (fn) => (opts.classify === false ? db.withRelaxedSync(fn) : fn());
+            const snapshots = await run(async () => {
+                const out = [];
+                for (const item of items) {
+                    const r = await ingestOne(item.raw_text, item.platform ?? 'cli', {
+                        titleOverride: item.title,
+                        sourceUrlOverride: item.source_url ?? null,
+                        createdAt: item.created_at,
+                        classify: opts.classify, keyed: opts.keyed, detailPending: item.detail_pending,
+                    }, session);
+                    out.push({
+                        id: r.id,
+                        created: r.created,
+                        changed: r.changed,
+                        title: r.title,
+                        summary: r.summary,
+                        analysis: {
+                            relatedDecisions: r.related.map(c => ({
+                                id: c.decisionId,
+                                title: db.getDecisionById(c.decisionId)?.title ?? '',
+                                // Must match the relation actually written above, or this is a second writer
+                                // of the same fact that can drift from it (ALI-503).
+                                relationship: 'relates',
+                                confidence: c.score,
+                            })),
+                        },
+                    });
+                }
+                return out;
+            });
             return { snapshots };
         },
         /**