@aletheia-works/vivarium-mcp 0.0.1

package/LICENSE

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package/README.md

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+# `@aletheia-works/vivarium-mcp`
+
+[Model Context Protocol](https://modelcontextprotocol.io) server that
+exposes the [Vivarium](https://github.com/aletheia-works/vivarium)
+reproduction catalogue to AI agent clients (Claude Code, Cline, Cursor,
+Continue, etc.).
+
+Vivarium is the universal bug-reproduction platform of the
+[`aletheia-works`](https://github.com/aletheia-works) organisation —
+"reproduce any bug, in any language, any environment, at any scale."
+This package is the agent-callable surface that lets AI tools
+*discover* what reproductions exist, look up their metadata, and read
+deployed verdict snapshots, without scraping the docs site.
+
+## Tools
+
+| Tool | Returns | Layer coverage |
+|---|---|---|
+| `list_recipes(layer?, project?, q?)` | Filtered list of catalogue entries. | All layers (1, 2, 3). |
+| `get_recipe(slug)` | Full metadata for one recipe (title, project, issue, page URL, verdict snapshot URL, GitHub source URL). | All layers. |
+| `lookup_verdict(slug)` | Layer 1 → `kind: "live"` + page URL (verdicts run in the browser). Layer 2/3 → `kind: "snapshot"` with the deployed `verdict.json` contents (verdict, exit code, image digest, stdout, stderr tail). | All layers (Layer 1 returns a stub). |
+| `match_error(text, limit?)` | Mechanical token-overlap ranking of recipes against a pasted error message or stack trace. Synonym table + bounded fuzzy match + multi-language stopwords (Phase 7 A5). | All layers. |
+| `verify_branch_fix(slug, fix_url? \| fix_source?)` | Scaffolding helper for the AI-slop verification loop. Layer 1 → Path A: a recipe-page `compare_url` with the fix pre-loaded. Layer 2/3 → Path B: a `/repro/compare` deep-link plus the `gh workflow run branch-fix-verdict.yml` command. NOT an execution engine — actual reproduction runs in the visitor's browser (Path A) or in GitHub Actions (Path B). | All layers. |
+| `prepare_new_recipe(project, issue, title, base_image?, repo_owner?, layer?)` | Scaffolding helper that bundles every artefact an agent needs to author a new recipe: validated slug, the exact `mise run recipes:new` and `mise run recipes:verify` commands, placeholder rows for `docs/data/recipe-facets.json` and (if the project is new) `docs/data/projects.json`, a commit-subject template, and a sequenced next-steps checklist. Validates the slug against the `docs/scripts/generate-recipes-index.ts` parser regex at call time. NOT an execution engine — the agent's shell tool runs the returned commands. | Layer 2 has the canonical scaffolder; Layer 1/3 fall back to copying from an existing recipe. |
+
+## Install
+
+> **Status (2026-05-06)**: not yet published to a registry. The
+> `mcp-server-v0.1.0` tag has not been pushed, so the `npx` and
+> `bunx jsr:` snippets below would 404 today. Until the first publish,
+> use the local-clone path. The
+> [`publish-mcp.yml`](https://github.com/aletheia-works/vivarium/blob/main/.github/workflows/publish-mcp.yml)
+> workflow handles dual JSR + npm release on tag push; the snippets
+> in the next two subsections will work once that runs for the first
+> time.
+
+### Local clone (works today)
+
+```bash
+git clone https://github.com/aletheia-works/vivarium.git
+cd vivarium/packages/mcp-server
+bun install
+bun run build
+```
+
+Then point your MCP client at the built entry point:
+
+```json
+{
+  "mcpServers": {
+    "vivarium": {
+      "command": "node",
+      "args": ["/absolute/path/to/vivarium/packages/mcp-server/dist/index.js"]
+    }
+  }
+}
+```
+
+### npm (post-publish; default for `npx`-based MCP launchers)
+
+Once the server has been published, the configuration becomes a
+single-line `npx` invocation. The exact MCP-config file location
+varies by client (Claude Code: `~/.claude/mcp.json`; Cline: its VS
+Code settings; Cursor: `~/.cursor/mcp.json`). Snippet:
+
+```json
+{
+  "mcpServers": {
+    "vivarium": {
+      "command": "npx",
+      "args": ["-y", "@aletheia-works/vivarium-mcp@latest"]
+    }
+  }
+}
+```
+
+### JSR (post-publish; Deno / Bun-native install)
+
+For clients with native JSR support (Bun ≥ 1.1, Deno):
+
+```bash
+bunx jsr:@aletheia-works/vivarium-mcp
+# or
+deno run --allow-net --allow-read jsr:@aletheia-works/vivarium-mcp
+```
+
+## Why dual-channel distribution
+
+Per [ADR-0019](https://github.com/aletheia-works/vivarium) (private
+memo), this package publishes to both registries with **JSR canonical
+and npm fallback**. JSR contributes structural supply-chain defences
+(no postinstall scripts, OIDC-only publish via Sigstore provenance,
+GitHub-org-bound scope ownership, source-only publish); npm carries
+the `npx` ergonomics most MCP launchers expect today. Both registries
+ship with build provenance — verifiable via the public Sigstore Rekor
+transparency log.
+
+## Configuration
+
+The server reads no environment variables and accepts no command-line
+flags in v1. It fetches the catalogue index from
+<https://aletheia-works.github.io/vivarium/api/recipes.json> with a
+5-minute in-process TTL, falling back to a build-time bundled snapshot
+when the network is unavailable.
+
+## Versioning
+
+The MCP server's surface (the three tools above and their input
+schemas) is locked at v1 by ADR-0019. Optional additive changes ship
+as minor revisions; breaking changes require a v2 design ADR.
+
+The recipes index format consumed by this server is locked separately
+at `index = "v1"` — see
+<https://aletheia-works.github.io/vivarium/spec/recipes-index-v1>.
+
+## License
+
+Apache-2.0 — see [LICENSE](./LICENSE).

package/dist/bundled/recipes.json

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+{
+    "index": "v1",
+    "contract": "v1",
+    "recipes": [
+        {
+            "slug": "cpython-137205",
+            "layer": 1,
+            "project": "cpython",
+            "issue": 137205,
+            "title": "python/cpython#137205",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/cpython/137205/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/cpython-137205",
+            "language": "python",
+            "tags": [
+                "sqlite3",
+                "pragma",
+                "foreign-keys",
+                "autocommit"
+            ],
+            "symptom": "fk-pragma-silently-dropped",
+            "severity": "spec-violation"
+        },
+        {
+            "slug": "numpy-28287",
+            "layer": 1,
+            "project": "numpy",
+            "issue": 28287,
+            "title": "numpy/numpy#28287",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/numpy/28287/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/numpy-28287",
+            "language": "python",
+            "tags": [
+                "timedelta64",
+                "comparison",
+                "datetime-units"
+            ],
+            "symptom": "ordering-non-transitive",
+            "severity": "bug"
+        },
+        {
+            "slug": "pandas-56679",
+            "layer": 1,
+            "project": "pandas",
+            "issue": 56679,
+            "title": "pandas-dev/pandas#56679",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/pandas/56679/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/pandas-56679",
+            "language": "python",
+            "tags": [
+                "empty-series",
+                "empty-dataframe",
+                "type-inference"
+            ],
+            "symptom": "dtype-mismatch",
+            "severity": "regression"
+        },
+        {
+            "slug": "php-12167",
+            "layer": 1,
+            "project": "php",
+            "issue": 12167,
+            "title": "php/php-src#12167",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/php/12167/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/php-12167",
+            "language": "php",
+            "tags": [
+                "json_encode",
+                "recursion-depth"
+            ],
+            "symptom": "json-encode-recursion",
+            "severity": "bug"
+        },
+        {
+            "slug": "regex-779",
+            "layer": 1,
+            "project": "regex",
+            "issue": 779,
+            "title": "rust-lang/regex#779",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/regex/779/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/regex-779",
+            "language": "rust",
+            "tags": [
+                "regex",
+                "wasm32-wasip1"
+            ],
+            "symptom": "regex-engine-edge-case",
+            "severity": "bug"
+        },
+        {
+            "slug": "ruby-21709",
+            "layer": 1,
+            "project": "ruby",
+            "issue": 21709,
+            "title": "ruby/ruby#21709",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/ruby/21709/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer1_wasm/ruby-21709",
+            "language": "ruby",
+            "tags": [
+                "string",
+                "unicode",
+                "combining-diacritics"
+            ],
+            "symptom": "unicode-normalize-nfd",
+            "severity": "bug"
+        },
+        {
+            "slug": "bash-local-shadows-exit",
+            "layer": 2,
+            "project": "bash",
+            "issue": 0,
+            "title": "bash `local` shadows command-substitution exit code",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/bash/local-shadows-exit/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer2_docker/bash-local-shadows-exit",
+            "language": "shell",
+            "tags": [
+                "bash",
+                "command-substitution",
+                "exit-code"
+            ],
+            "symptom": "local-shadows-exit-status",
+            "severity": "footgun",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/bash/local-shadows-exit/verdict.json"
+        },
+        {
+            "slug": "find-xargs-whitespace",
+            "layer": 2,
+            "project": "find",
+            "issue": 0,
+            "title": "`find … | xargs cmd` is unsafe for whitespace in filenames",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/find/xargs-whitespace/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer2_docker/find-xargs-whitespace",
+            "language": "shell",
+            "tags": [
+                "find",
+                "xargs",
+                "whitespace",
+                "filenames"
+            ],
+            "symptom": "whitespace-unsafe-pipeline",
+            "severity": "footgun",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/find/xargs-whitespace/verdict.json"
+        },
+        {
+            "slug": "flock-is-advisory",
+            "layer": 2,
+            "project": "flock",
+            "issue": 0,
+            "title": "`flock(2)` is advisory only",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/flock/is-advisory/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer2_docker/flock-is-advisory",
+            "language": "shell",
+            "tags": [
+                "flock",
+                "filesystem",
+                "concurrency"
+            ],
+            "symptom": "advisory-lock-bypass",
+            "severity": "spec-violation",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/flock/is-advisory/verdict.json"
+        },
+        {
+            "slug": "node-63041",
+            "layer": 2,
+            "project": "node",
+            "issue": 63041,
+            "title": "Node.js `Intl.DateTimeFormat` drops month with `calendar: 'iso8601'`",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/node/63041/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer2_docker/node-63041",
+            "language": "javascript",
+            "tags": [
+                "intl",
+                "datetimeformat",
+                "iso8601-calendar",
+                "icu"
+            ],
+            "symptom": "intl-month-dropped",
+            "severity": "regression",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/node/63041/verdict.json"
+        },
+        {
+            "slug": "postgres-lost-update",
+            "layer": 2,
+            "project": "postgres",
+            "issue": 0,
+            "title": "PostgreSQL lost update under READ COMMITTED",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/postgres/lost-update/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer2_docker/postgres-lost-update",
+            "language": "sql",
+            "tags": [
+                "postgresql",
+                "isolation-level",
+                "concurrency"
+            ],
+            "symptom": "lost-update-read-committed",
+            "severity": "datarace",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/postgres/lost-update/verdict.json"
+        },
+        {
+            "slug": "lost-update",
+            "layer": 3,
+            "project": "pthread",
+            "issue": 0,
+            "title": "pthread lost-update data race (canonical)",
+            "page_url": "https://aletheia-works.github.io/vivarium/repro/pthread/lost-update/",
+            "source_url": "https://github.com/aletheia-works/vivarium/tree/main/src/layer3_thirdway/lost-update",
+            "language": "c",
+            "tags": [
+                "pthread",
+                "rr-replay",
+                "deterministic"
+            ],
+            "symptom": "lost-update-data-race",
+            "severity": "datarace",
+            "verdict_url": "https://aletheia-works.github.io/vivarium/repro/pthread/lost-update/verdict.json"
+        }
+    ]
+}

package/dist/catalogue.d.ts

@@ -0,0 +1,7 @@
+import type { RecipesIndex, VerdictSnapshot } from './types.js';
+export declare const INDEX_URL = "https://aletheia-works.github.io/vivarium/api/recipes.json";
+export declare function _resetCacheForTesting(): void;
+export declare function getBundledIndex(): RecipesIndex;
+export declare function getCatalogue(): Promise<RecipesIndex>;
+export declare function fetchVerdictSnapshot(verdictUrl: string): Promise<VerdictSnapshot | null>;
+//# sourceMappingURL=catalogue.d.ts.map

package/dist/catalogue.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"catalogue.d.ts","sourceRoot":"","sources":["../src/catalogue.ts"],"names":[],"mappings":"AAcA,OAAO,KAAK,EAAE,YAAY,EAAE,eAAe,EAAE,MAAM,YAAY,CAAC;AAGhE,eAAO,MAAM,SAAS,+DACwC,CAAC;AAY/D,wBAAgB,qBAAqB,IAAI,IAAI,CAE5C;AAED,wBAAgB,eAAe,IAAI,YAAY,CAE9C;AAED,wBAAsB,YAAY,IAAI,OAAO,CAAC,YAAY,CAAC,CAsB1D;AAED,wBAAsB,oBAAoB,CACxC,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,eAAe,GAAG,IAAI,CAAC,CAYjC"}

package/dist/catalogue.js

@@ -0,0 +1,63 @@
+// Catalogue fetcher with a 5-minute in-process TTL and a build-time
+// bundled fallback. See ADR-0019 §4 for the data-source decision.
+//
+// Two modes:
+//   1. Runtime fetch from the canonical Pages endpoint with a TTL cache
+//      so the agent always sees a catalogue recent enough to reflect a
+//      same-day recipe addition.
+//   2. Bundled snapshot fallback for offline use, network failure, or
+//      cold start before the first successful fetch.
+//
+// The bundled snapshot is shipped in src/bundled/recipes.json — it is
+// refreshed at publish time by the GHA workflow that copies the latest
+// docs/public/api/recipes.json into the package before publish.
+import bundledIndex from './bundled/recipes.json' with { type: 'json' };
+export const INDEX_URL = 'https://aletheia-works.github.io/vivarium/api/recipes.json';
+const TTL_MS = 5 * 60 * 1000;
+let cache = null;
+// Reset cache; only used by tests.
+export function _resetCacheForTesting() {
+    cache = null;
+}
+export function getBundledIndex() {
+    return bundledIndex;
+}
+export async function getCatalogue() {
+    const now = Date.now();
+    if (cache && now - cache.fetchedAt < TTL_MS) {
+        return cache.index;
+    }
+    try {
+        const res = await fetch(INDEX_URL, {
+            headers: { 'accept': 'application/json' },
+        });
+        if (res.ok) {
+            const data = (await res.json());
+            if (data && data.index === 'v1' && Array.isArray(data.recipes)) {
+                cache = { index: data, fetchedAt: now };
+                return data;
+            }
+        }
+    }
+    catch {
+        // Network failure → fall through to bundled fallback.
+    }
+    return getBundledIndex();
+}
+export async function fetchVerdictSnapshot(verdictUrl) {
+    try {
+        const res = await fetch(verdictUrl, {
+            headers: { 'accept': 'application/json' },
+        });
+        if (!res.ok)
+            return null;
+        const data = (await res.json());
+        if (data && data.contract === 'v1')
+            return data;
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+//# sourceMappingURL=catalogue.js.map

package/dist/catalogue.js.map

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package/dist/index.d.ts

@@ -0,0 +1,3 @@
+#!/usr/bin/env node
+export {};
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":""}

package/dist/index.js

@@ -0,0 +1,18 @@
+#!/usr/bin/env node
+//
+// Vivarium MCP server — stdio entrypoint.
+//
+// Spawned by an MCP client (Claude Code, Cline, Cursor, Continue, …)
+// via `npx -y @aletheia-works/vivarium-mcp` or the equivalent JSR
+// invocation. Speaks the MCP protocol over stdin / stdout.
+//
+// See packages/mcp-server/README.md for client configuration snippets
+// and ADR-0019 (private memo) for the design rationale.
+import { runServer } from './server.js';
+runServer().catch((err) => {
+    // The MCP transport itself uses stdout, so all human-visible
+    // diagnostics go to stderr.
+    console.error('vivarium-mcp: fatal:', err);
+    process.exit(1);
+});
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";AACA,EAAE;AACF,0CAA0C;AAC1C,EAAE;AACF,qEAAqE;AACrE,kEAAkE;AAClE,2DAA2D;AAC3D,EAAE;AACF,sEAAsE;AACtE,wDAAwD;AAExD,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAExC,SAAS,EAAE,CAAC,KAAK,CAAC,CAAC,GAAY,EAAE,EAAE;IACjC,6DAA6D;IAC7D,4BAA4B;IAC5B,OAAO,CAAC,KAAK,CAAC,sBAAsB,EAAE,GAAG,CAAC,CAAC;IAC3C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClB,CAAC,CAAC,CAAC"}

package/dist/server.d.ts

@@ -0,0 +1,4 @@
+import { Server } from '@modelcontextprotocol/sdk/server/index.js';
+export declare function createServer(): Server;
+export declare function runServer(): Promise<void>;
+//# sourceMappingURL=server.d.ts.map

package/dist/server.d.ts.map

@@ -0,0 +1 @@
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