@aleph-ai/tinyaleph 1.2.1 → 1.3.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +187 -2
- package/backends/bioinformatics/binding.js +503 -0
- package/backends/bioinformatics/dna-computing.js +664 -0
- package/backends/bioinformatics/encoding.js +339 -0
- package/backends/bioinformatics/folding.js +454 -0
- package/backends/bioinformatics/genetic-code.js +269 -0
- package/backends/bioinformatics/index.js +522 -0
- package/backends/bioinformatics/transcription.js +221 -0
- package/backends/bioinformatics/translation.js +264 -0
- package/backends/index.js +25 -1
- package/core/compound.js +532 -0
- package/core/hilbert.js +454 -1
- package/core/index.js +106 -12
- package/core/inference.js +605 -0
- package/core/resonance.js +245 -616
- package/core/symbols/archetypes.js +478 -0
- package/core/symbols/base.js +302 -0
- package/core/symbols/elements.js +487 -0
- package/core/symbols/hieroglyphs.js +303 -0
- package/core/symbols/iching.js +471 -0
- package/core/symbols/index.js +77 -0
- package/core/symbols/tarot.js +211 -0
- package/core/symbols.js +22 -0
- package/docs/design/BIOINFORMATICS_BACKEND_DESIGN.md +493 -0
- package/docs/guide/06-symbolic-ai.md +370 -0
- package/docs/guide/README.md +2 -1
- package/docs/reference/05-symbolic-ai.md +570 -0
- package/docs/reference/06-bioinformatics.md +546 -0
- package/docs/reference/README.md +32 -2
- package/docs/theory/11-prgraph-memory.md +559 -0
- package/docs/theory/12-resonant-attention.md +661 -0
- package/modular.js +33 -1
- package/package.json +1 -1
package/modular.js
CHANGED
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@@ -97,7 +97,18 @@ const {
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Backend,
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SemanticBackend,
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CryptographicBackend,
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-
ScientificBackend
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+
ScientificBackend,
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+
BioinformaticsBackend,
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+
TranscriptionOperator,
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TranslationOperator,
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FoldingTransform,
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BindingAffinityCalculator,
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MolecularDocker,
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DNAStrand,
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DNACircuit,
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ANDGate,
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ORGate,
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NOTGate
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} = backends;
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// Unified engine
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@@ -123,6 +134,12 @@ function createEngine(backendType, config = {}) {
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case 'quantum':
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backend = new ScientificBackend(config);
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break;
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case 'bioinformatics':
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case 'bio':
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case 'dna':
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case 'protein':
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backend = new BioinformaticsBackend(config);
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break;
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default:
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throw new Error(`Unknown backend type: ${backendType}`);
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}
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@@ -156,6 +173,21 @@ module.exports = {
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SemanticBackend,
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CryptographicBackend,
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ScientificBackend,
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BioinformaticsBackend,
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// Bioinformatics operators
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TranscriptionOperator,
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TranslationOperator,
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FoldingTransform,
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BindingAffinityCalculator,
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MolecularDocker,
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// DNA Computing
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DNAStrand,
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DNACircuit,
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ANDGate,
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ORGate,
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NOTGate,
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// Core math
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Hypercomplex,
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@aleph-ai/tinyaleph",
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-
"version": "1.
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"version": "1.3.0",
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"description": "Prime-resonant semantic computing framework - hypercomplex algebra, oscillator dynamics, and entropy-minimizing reasoning",
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"main": "index.js",
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"types": "types/index.d.ts",
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