@alcyone-labs/arg-parser 2.12.0 → 2.12.1

package/README.md

@@ -79,6 +79,7 @@ A modern, type-safe command line argument parser with built-in MCP (Model Contex
   - [Typical Errors](#typical-errors)
 - [System Flags & Configuration](#system-flags--configuration)
 - [Changelog](#changelog)
+  - [v2.12.1](#v2121)
   - [v2.12.0](#v2120)
   - [v2.11.0](#v2110)
   - [v2.10.3](#v2103)
@@ -2302,6 +2303,12 @@ ArgParser includes built-in `--s-*` flags for development, debugging, and config
 
 ## Changelog
 
+### v2.12.1
+
+**Fixes**
+
+- Fix env config matching and improve working directory integration
+
 ### v2.12.0
 
 - Switch back to official @modelcontextprotocol/sdk as it now supports Zod V4, this resolves a security issue from a dependency in MCP SDK @ 1.16.0 branch.

package/dist/config/ConfigurationManager.d.ts

@@ -57,7 +57,7 @@ export declare class ConfigurationManager {
     /**
      * Merges environment configuration with command line arguments
      */
-    mergeEnvConfigWithArgs(envConfig: Record<string, any>, processArgs: string[]): string[];
+    mergeEnvConfigWithArgs(envConfig: Record<string, any>, processArgs: string[], parserChain?: any[]): string[];
     /**
      * Generates environment file format
      */

package/dist/config/ConfigurationManager.d.ts.map

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package/dist/core/ArgParserBase.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"ArgParserBase.d.ts","sourceRoot":"","sources":["../../src/core/ArgParserBase.ts"],"names":[],"mappings":"AAMA,OAAO,EAAmB,KAAK,MAAM,EAAE,MAAM,iCAAiC,CAAC;AAG/E,OAAO,EACL,uBAAuB,EACvB,KAAK,aAAa,EACnB,MAAM,6BAA6B,CAAC;AACrC,OAAO,EAAE,iBAAiB,EAAE,KAAK,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAChF,OAAO,EACL,mBAAmB,EACnB,KAAK,iBAAiB,EACvB,MAAM,yBAAyB,CAAC;AAKjC,OAAO,KAAK,EACV,UAAU,EACV,KAAK,EACL,eAAe,EAEf,WAAW,EACX,WAAW,EACX,aAAa,EACb,gBAAgB,EAChB,WAAW,EACZ,MAAM,SAAS,CAAC;AAEjB,qBAAa,cAAe,SAAQ,KAAK;IAI9B,QAAQ,EAAE,MAAM,EAAE;IAHpB,YAAY,EAAE,MAAM,EAAE,CAAC;gBAE5B,OAAO,EAAE,MAAM,EACR,QAAQ,GAAE,MAAM,EAAO;CAMjC;AAED,MAAM,WAAW,gBAAgB,CAAC,cAAc,GAAG,GAAG;IACpD;;OAEG;IACH,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,WAAW,CAAC,EAAE,WAAW,EAAE,CAAC;IAC5B,OAAO,CAAC,EAAE,CACR,GAAG,EAAE,eAAe,CAAC,GAAG,EAAE,GAAG,CAAC,KAC3B,cAAc,GAAG,OAAO,CAAC,cAAc,CAAC,CAAC;IAE9C;;;;;OAKG;IACH,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB;;;;;;OAMG;IACH,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB;;;;;;OAMG;IACH,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB;;;;OAIG;IACH,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B;;;OAGG;IACH,sBAAsB,CAAC,EAAE,OAAO,CAAC;IACjC,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB;;;;OAIG;IACH,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB;;;;;OAKG;IACH,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB;;;OAGG;IACH,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB;;;;;OAKG;IACH,kBAAkB,CAAC,EAAE,gBAAgB,CAAC;IACtC;;;;OAIG;IACH,0BAA0B,CAAC,EAAE,OAAO,CAAC;IACrC;;;OAGG;IACH,MAAM,CAAC,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,WAAW,aAAa;IAC5B;;;OAGG;IACH,gBAAgB,CAAC,EAAE,OAAO,CAAC;IAC3B;;;OAGG;IACH,YAAY,CAAC,EAAE,OAAO,CAAC;IACvB;;;;OAIG;IACH,IAAI,CAAC,EAAE,OAAO,CAAC;IACf;;;;OAIG;IACH,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB;;;;OAIG;IACH,kBAAkB,CAAC,EAAE,OAAO,CAAC;IAC7B;;;;;;OAMG;IACH,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB;;;OAGG;IACH,aAAa,CAAC,EAAE,MAAM,CAAC;CACxB;AAED,KAAK,sBAAsB,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,GAAG;IACzC,aAAa,CAAC,EAAE,MAAM,EAAE,CAAC;IACzB,gBAAgB,CAAC,EAAE;QAAE,OAAO,EAAE,QAAQ,CAAC;QAAC,OAAO,EAAE,eAAe,CAAA;KAAE,CAAC;CACpE,CAAC;AAcF,qBAAa,aAAa,CACxB,cAAc,GAAG,GAAG,CACpB,YAAW,UAAU,CAAC,cAAc,CAAC;;gBA8CnC,OAAO,GAAE,gBAAgB,CAAC,cAAc,CAAM,EAC9C,YAAY,CAAC,EAAE,SAAS,KAAK,EAAE;IA4EjC,IAAI,KAAK,IAAI,aAAa,EAAE,CAE3B;IAED,IAAI,SAAS,IAAI,MAAM,EAAE,CAExB;IAEM,UAAU,IAAI,MAAM,GAAG,SAAS;IAIhC,iBAAiB,IAAI,MAAM,GAAG,SAAS;IAI9C;;OAEG;IACH,IAAW,MAAM,IAAI,MAAM,CAE1B;IAEM,iBAAiB,IAAI,MAAM;IAI3B,cAAc,IAAI,MAAM,GAAG,SAAS;IAIpC,WAAW,IAAI,OAAO;IAI7B;;;OAGG;IACH,OAAO,CAAC,WAAW;IA0BZ,UAAU,IAAI,CAAC,CAAC,GAAG,EAAE,eAAe,KAAK,IAAI,CAAC,GAAG,SAAS;IAI1D,cAAc,IAAI,GAAG,CAAC,MAAM,EAAE,WAAW,CAAC;YAInC,YAAY;IA8I1B,QAAQ,CAAC,KAAK,EAAE,SAAS,KAAK,EAAE,GAAG,IAAI;IAKvC,OAAO,CAAC,IAAI,EAAE,KAAK,GAAG,IAAI;IAK1B,aAAa,CAAC,gBAAgB,EAAE,WAAW,GAAG,IAAI;IA0FlD;;;;;;;OAOG;IACH,UAAU,CACR,OAAO,EAAE,CACP,GAAG,EAAE,eAAe,CAAC,GAAG,EAAE,GAAG,CAAC,KAC3B,cAAc,GAAG,OAAO,CAAC,cAAc,CAAC,GAC5C,IAAI;IAKP,QAAQ,CAAC,QAAQ,CAAC,EAAE,MAAM,GAAG,IAAI;IAggCjC;;;;;OAKG;IACH,OAAO,CAAC,MAAM,CAAC,kBAAkB;IAqB3B,KAAK,CACT,WAAW,CAAC,EAAE,MAAM,EAAE,EACtB,OAAO,CAAC,EAAE,aAAa,GACtB,OAAO,CAAC,sBAAsB,CAAC,GAAG,CAAC,GAAG,WAAW,CAAC;IAkLrD;;;;;OAKG;IACI,UAAU,CACf,WAAW,CAAC,EAAE,MAAM,EAAE,EACtB,OAAO,CAAC,EAAE,aAAa,GACtB,OAAO,CAAC,sBAAsB,CAAC,GAAG,CAAC,GAAG,WAAW,CAAC;IAIrD;;;OAGG;YACW,eAAe;IAyU7B,QAAQ,IAAI,MAAM;IAoQX,aAAa,CAAC,IAAI,EAAE,MAAM,GAAG,WAAW,GAAG,SAAS;IAIpD,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO;IAKrC;;;;OAIG;IACI,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,aAAa,GAAG,SAAS;IAI1D,eAAe,IAAI,MAAM,EAAE;IAU3B,kBAAkB,IAAI,WAAW,CAAC,aAAa,EAAE,CAAC;IAqUzD;;OAEG;IACH,cAAc,CAAC,MAAM,EAAE,iBAAiB,GAAG,IAAI;IAU/C;;OAEG;IACH,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI;IAQrC;;OAEG;IACH,eAAe,IAAI,iBAAiB,EAAE;IAItC;;OAEG;IACH,YAAY,CAAC,MAAM,EAAE,eAAe,GAAG,IAAI;IAM3C;;OAEG;IACH,eAAe,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI;IAQnC;;OAEG;IACH,aAAa,IAAI,eAAe,EAAE;IAIlC;;OAEG;IACH,WAAW,CACT,QAAQ,EAAE,CAAC,KAAK,EAAE;QAChB,IAAI,EAAE,aAAa,CAAC;QACpB,MAAM,EAAE,MAAM,CAAC;QACf,UAAU,CAAC,EAAE,MAAM,CAAC;KACrB,KAAK,IAAI,GACT,IAAI;IAKP;;OAEG;IACH,YAAY,CACV,QAAQ,EAAE,CAAC,KAAK,EAAE;QAChB,IAAI,EAAE,aAAa,CAAC;QACpB,MAAM,EAAE,MAAM,CAAC;QACf,UAAU,CAAC,EAAE,MAAM,CAAC;KACrB,KAAK,IAAI,GACT,IAAI;IAKP;;OAEG;IACH,0BAA0B,IAAI,uBAAuB;IAIrD;;OAEG;IACH,sBAAsB,IAAI,mBAAmB;IAI7C;;OAEG;IACH,oBAAoB,IAAI,iBAAiB;CAwgB1C;AAED;;;GAGG;AACH,eAAO,MAAM,eAAe,GAAU,KAAK,eAAe,kBAEzD,CAAC"}

package/dist/index.cjs

@@ -888,6 +888,9 @@ class ConfigurationManager {
     for (const parser of parserChain) {
       allFlags.push(...parser.flags);
     }
+    const normalizeKey = (key) => {
+      return key.toLowerCase().replace(/[-_]/g, "");
+    };
     for (const [key, value] of Object.entries(rawConfig)) {
       let flag = allFlags.find((f) => f["name"] === key);
       if (!flag) {
@@ -895,6 +898,10 @@ class ConfigurationManager {
           (f) => f["name"].toLowerCase() === key.toLowerCase()
         );
       }
+      if (!flag) {
+        const normalizedKey = normalizeKey(key);
+        flag = allFlags.find((f) => normalizeKey(f["name"]) === normalizedKey);
+      }
       if (flag) {
         try {
           flagValues[flag["name"]] = this.convertValueToFlagType(value, flag);
@@ -986,22 +993,42 @@ class ConfigurationManager {
   /**
    * Merges environment configuration with command line arguments
    */
-  mergeEnvConfigWithArgs(envConfig, processArgs) {
+  mergeEnvConfigWithArgs(envConfig, processArgs, parserChain) {
     const mergedArgs = [...processArgs];
+    const allFlags = [];
+    if (parserChain) {
+      for (const parser of parserChain) {
+        allFlags.push(...parser.flags);
+      }
+    }
+    const getFlagOption = (flagName) => {
+      const flag = allFlags.find((f) => f["name"] === flagName);
+      if (flag && Array.isArray(flag["options"]) && flag["options"].length > 0) {
+        const longOption = flag["options"].find(
+          (opt) => opt.startsWith("--")
+        );
+        return longOption || flag["options"][0];
+      }
+      return `--${flagName}`;
+    };
     for (const [key, value] of Object.entries(envConfig)) {
-      const flagPattern = new RegExp(`^--${key}(=|$)`);
-      const hasFlag = mergedArgs.some((arg) => flagPattern.test(arg));
+      const flagOption = getFlagOption(key);
+      const flagOptionWithoutDashes = flagOption.replace(/^--?/, "");
+      const hasFlag = mergedArgs.some((arg) => {
+        const argWithoutDashes = arg.replace(/^--?/, "").split("=")[0];
+        return argWithoutDashes === flagOptionWithoutDashes || argWithoutDashes === key;
+      });
       if (!hasFlag) {
         if (typeof value === "boolean") {
           if (value) {
-            mergedArgs.push(`--${key}`);
+            mergedArgs.push(flagOption);
           }
         } else if (Array.isArray(value)) {
           for (const item of value) {
-            mergedArgs.push(`--${key}`, String(item));
+            mergedArgs.push(flagOption, String(item));
           }
         } else {
-          mergedArgs.push(`--${key}`, String(value));
+          mergedArgs.push(flagOption, String(value));
         }
       }
     }
@@ -4305,33 +4332,25 @@ class ArgParserBase {
         if (providedPath && !providedPath.startsWith("-")) {
           const basePath = this.#effectiveWorkingDirectory || process.cwd();
           envFilePath = path__namespace.resolve(basePath, providedPath);
-        } else {
+        } else if (shouldAutoDiscover) {
           const basePath = this.#effectiveWorkingDirectory || process.cwd();
           envFilePath = this.#configurationManager.discoverEnvFile(basePath);
           if (!envFilePath) {
-            this.#logger.warn(
-              simpleChalk.yellow(
-                "Warning: No .env file found in working directory. Continuing without environment configuration."
-              )
+            console.warn(
+              "Warning: No .env file found in working directory. Continuing without environment configuration."
             );
             processArgs.splice(withEnvIndex, 1);
           }
         }
-      }
-      if (shouldAutoDiscover) {
+      } else if (shouldAutoDiscover) {
         const basePath = this.#effectiveWorkingDirectory || process.cwd();
         envFilePath = this.#configurationManager.discoverEnvFile(basePath);
         if (envFilePath) {
-          this.#logger.info(
-            simpleChalk.dim(`Auto-discovered env file: ${envFilePath}`)
-          );
+          console.warn(`Auto-discovered env file: ${envFilePath}`);
         } else {
-          this.#logger.warn(
-            simpleChalk.yellow(
-              "Warning: No .env file found in working directory. Continuing without environment configuration."
-            )
+          console.warn(
+            "Warning: No .env file found in working directory. Continuing without environment configuration."
           );
-          processArgs.splice(withEnvIndex, 1);
         }
       }
       if (envFilePath) {
@@ -4352,7 +4371,8 @@ class ArgParserBase {
           if (envConfigArgs) {
             const mergedArgs = identifiedFinalParser2.#configurationManager.mergeEnvConfigWithArgs(
               envConfigArgs,
-              processArgs
+              processArgs,
+              identifiedParserChain
             );
             processArgs.length = 0;
             processArgs.push(...mergedArgs);
@@ -4367,6 +4387,52 @@ class ArgParserBase {
               processArgs.splice(finalWithEnvIndex, 1);
             }
           }
+        } catch (error) {
+          console.error(
+            `Error loading environment file: ${error instanceof Error ? error.message : String(error)}`
+          );
+          return this._handleExit(
+            1,
+            `Error loading environment file: ${error instanceof Error ? error.message : String(error)}`,
+            "error"
+          );
+        }
+      }
+      if (shouldAutoDiscover) {
+        const basePath = this.#effectiveWorkingDirectory || process.cwd();
+        envFilePath = this.#configurationManager.discoverEnvFile(basePath);
+        if (envFilePath) {
+          console.warn(`Auto-discovered env file: ${envFilePath}`);
+        } else {
+          console.warn(
+            "Warning: No .env file found in working directory. Continuing without environment configuration."
+          );
+        }
+      }
+      if (envFilePath) {
+        try {
+          const {
+            finalParser: identifiedFinalParser2,
+            parserChain: identifiedParserChain
+          } = this.#_identifyCommandChainAndParsers(
+            processArgs,
+            this,
+            [],
+            [this]
+          );
+          const envConfigArgs = identifiedFinalParser2.#configurationManager.loadEnvFile(
+            envFilePath,
+            identifiedParserChain
+          );
+          if (envConfigArgs) {
+            const mergedArgs = identifiedFinalParser2.#configurationManager.mergeEnvConfigWithArgs(
+              envConfigArgs,
+              processArgs,
+              identifiedParserChain
+            );
+            processArgs.length = 0;
+            processArgs.push(...mergedArgs);
+          }
         } catch (error) {
           console.error(
             simpleChalk.red(
@@ -4396,6 +4462,45 @@ class ArgParserBase {
         }
       }
     }
+    const withEnvWasProvided = processArgs.some(
+      (arg) => arg === "--s-with-env"
+    );
+    const shouldAutoDiscoverWithoutFlag = this.#workingDirectoryResolved && this.#effectiveWorkingDirectory !== this.#rootPath && !withEnvWasProvided;
+    if (shouldAutoDiscoverWithoutFlag) {
+      const basePath = this.#effectiveWorkingDirectory || process.cwd();
+      const autoDiscoveredEnvFile = this.#configurationManager.discoverEnvFile(basePath);
+      if (autoDiscoveredEnvFile) {
+        console.warn(`Auto-discovered env file: ${autoDiscoveredEnvFile}`);
+        try {
+          const {
+            finalParser: envFinalParser,
+            parserChain: envParserChain
+          } = this.#_identifyCommandChainAndParsers(
+            processArgs,
+            this,
+            [],
+            [this]
+          );
+          const envConfigArgs = envFinalParser.#configurationManager.loadEnvFile(
+            autoDiscoveredEnvFile,
+            envParserChain
+          );
+          if (envConfigArgs) {
+            const mergedArgs = envFinalParser.#configurationManager.mergeEnvConfigWithArgs(
+              envConfigArgs,
+              processArgs,
+              envParserChain
+            );
+            processArgs.length = 0;
+            processArgs.push(...mergedArgs);
+          }
+        } catch (error) {
+          console.error(
+            `Error loading auto-discovered environment file: ${error instanceof Error ? error.message : String(error)}`
+          );
+        }
+      }
+    }
     const { finalParser: identifiedFinalParser } = this.#_identifyCommandChainAndParsers(processArgs, this, [], [this]);
     const buildDxtIndex = processArgs.findIndex(
       (arg) => (arg ?? "").toLowerCase() === "--s-build-dxt"