@alaarab/cortex 1.13.4 → 1.13.5

package/mcp/dist/content-learning.js

@@ -279,8 +279,11 @@ export function addFindingToFile(cortexPath, project, learning, citationInput, o
         }
         const content = fs.readFileSync(learningsPath, "utf8");
         const legacyHistory = opts?.skipLegacyDedup ? "" : readLegacyHistoryContent(resolvedDir);
-        // When superseding, strip the old finding from history so dedup doesn't block the intentionally similar replacement
-        const historyForDedup = supersedesText
+        // When superseding, strip the old finding from history so dedup doesn't block the intentionally similar replacement.
+        // Skip the strip if new finding is identical to the superseded one (self-supersession should still be blocked by dedup).
+        const isSelfSupersession = supersedesText &&
+            learning.trim().toLowerCase().slice(0, 60) === supersedesText.trim().toLowerCase().slice(0, 60);
+        const historyForDedup = (supersedesText && !isSelfSupersession)
             ? (legacyHistory ? `${content}\n${legacyHistory}` : content)
                 .split("\n")
                 .filter(line => !line.startsWith("- ") || !line.toLowerCase().includes(supersedesText.slice(0, 40).toLowerCase()))

package/mcp/dist/data-access.js

@@ -338,7 +338,7 @@ export function completeBacklogItem(cortexPath, project, match) {
             return forwardErr(parsed);
         const found = findItemByMatch(parsed.data, match);
         if (found.error)
-            return cortexErr(found.error);
+            return cortexErr(found.error, CortexError.AMBIGUOUS_MATCH);
         if (!found.match)
             return cortexErr(`No backlog item matching "${match}" in project "${project}". Check the item text or use its ID (shown in the backlog view).`, CortexError.NOT_FOUND);
         const [item] = parsed.data.items[found.match.section].splice(found.match.index, 1);
@@ -359,7 +359,7 @@ export function updateBacklogItem(cortexPath, project, match, updates) {
             return forwardErr(parsed);
         const found = findItemByMatch(parsed.data, match);
         if (found.error)
-            return cortexErr(found.error);
+            return cortexErr(found.error, CortexError.AMBIGUOUS_MATCH);
         if (!found.match)
             return cortexErr(`No backlog item matching "${match}" in project "${project}". Check the item text or use its ID (shown in the backlog view).`, CortexError.NOT_FOUND);
         const item = parsed.data.items[found.match.section][found.match.index];
@@ -405,7 +405,7 @@ export function pinBacklogItem(cortexPath, project, match) {
             return forwardErr(parsed);
         const found = findItemByMatch(parsed.data, match);
         if (found.error)
-            return cortexErr(found.error);
+            return cortexErr(found.error, CortexError.AMBIGUOUS_MATCH);
         if (!found.match)
             return cortexErr(`No backlog item matching "${match}" in project "${project}". Check the item text or use its ID (shown in the backlog view).`, CortexError.NOT_FOUND);
         const item = parsed.data.items[found.match.section][found.match.index];
@@ -427,7 +427,7 @@ export function unpinBacklogItem(cortexPath, project, match) {
             return forwardErr(parsed);
         const found = findItemByMatch(parsed.data, match);
         if (found.error)
-            return cortexErr(found.error);
+            return cortexErr(found.error, CortexError.AMBIGUOUS_MATCH);
         if (!found.match)
             return cortexErr(`No backlog item matching "${match}" in project "${project}". Check the item text or use its ID (shown in the backlog view).`, CortexError.NOT_FOUND);
         const item = parsed.data.items[found.match.section][found.match.index];

package/mcp/dist/mcp-finding.js

@@ -180,7 +180,8 @@ export function register(server, ctx) {
                     .filter((name) => name && !name.startsWith(".") && name !== "profiles")));
                 const commitMsg = message || `cortex: save ${files.length} file(s) across ${projectNames.length} project(s)`;
                 runCustomHooks(cortexPath, "pre-save");
-                runGit(["add", "-A"]);
+                // Restrict to known cortex file types to avoid staging .env or credential files
+                runGit(["add", "--", "*.md", "*.json", "*.yaml", "*.yml", "*.jsonl", "*.txt"]);
                 runGit(["commit", "-m", commitMsg]);
                 let hasRemote = false;
                 try {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@alaarab/cortex",
-  "version": "1.13.4",
+  "version": "1.13.5",
   "description": "Long-term memory for AI agents — stored as markdown in a git repo you own.",
   "type": "module",
   "bin": {