@aionis/substrate 0.1.0

package/dist/file-substrate.js

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+import { mkdir, readFile, rename, writeFile, appendFile } from "node:fs/promises";
+import { dirname, join } from "node:path";
+import { randomUUID } from "node:crypto";
+import { applyAionisEvent, checksumAionisEvents, cloneReplayState, emptyReplayState, eventKey, snapshotFromReplayState, } from "./event-log.js";
+import { searchMemoryNodes } from "./search.js";
+import { AIONIS_SUBSTRATE_SCHEMA_VERSION as CURRENT_SCHEMA_VERSION } from "./types.js";
+function requireNonEmpty(value, label) {
+    const trimmed = value.trim();
+    if (!trimmed)
+        throw new Error(`${label} is required`);
+    return trimmed;
+}
+function clampConfidence(value) {
+    if (!Number.isFinite(value))
+        throw new Error("confidence must be finite");
+    if (value < 0)
+        return 0;
+    if (value > 1)
+        return 1;
+    return value;
+}
+function normalizeStrings(values) {
+    return Array.from(new Set((values ?? []).map((value) => value.trim()).filter(Boolean)));
+}
+async function readEvents(path) {
+    try {
+        const raw = await readFile(path, "utf8");
+        return raw
+            .split("\n")
+            .map((line) => line.trim())
+            .filter(Boolean)
+            .map((line) => JSON.parse(line));
+    }
+    catch (err) {
+        if (err.code === "ENOENT")
+            return [];
+        throw err;
+    }
+}
+function relationBlocksDirectUse(kind) {
+    return kind === "supersedes" || kind === "contradicts" || kind === "invalidates";
+}
+function relationRequiresRehydrate(kind) {
+    return kind === "requires_payload";
+}
+function sortNodes(nodes) {
+    return [...nodes].sort((a, b) => {
+        const byTime = b.updatedAt.localeCompare(a.updatedAt);
+        if (byTime !== 0)
+            return byTime;
+        return a.id.localeCompare(b.id);
+    });
+}
+export async function openFileAionisSubstrate(options) {
+    const dir = options.dir;
+    const now = options.now ?? (() => new Date());
+    const eventsPath = join(dir, "events.jsonl");
+    const snapshotPath = join(dir, "snapshot.json");
+    const state = emptyReplayState();
+    let tail = Promise.resolve();
+    await mkdir(dir, { recursive: true });
+    for (const event of await readEvents(eventsPath)) {
+        applyAionisEvent(state, event);
+    }
+    await persistSnapshot();
+    function isoNow() {
+        return now().toISOString();
+    }
+    async function persistSnapshot() {
+        const snapshot = snapshotFromReplayState(state);
+        const tempPath = `${snapshotPath}.tmp-${process.pid}-${randomUUID()}`;
+        await mkdir(dirname(snapshotPath), { recursive: true });
+        await writeFile(tempPath, `${JSON.stringify(snapshot, null, 2)}\n`, "utf8");
+        await rename(tempPath, snapshotPath);
+    }
+    async function replaceEventLog(events) {
+        const tempPath = `${eventsPath}.tmp-${process.pid}-${randomUUID()}`;
+        await mkdir(dirname(eventsPath), { recursive: true });
+        await writeFile(tempPath, events.map((event) => JSON.stringify(event)).join("\n") + (events.length > 0 ? "\n" : ""), "utf8");
+        await rename(tempPath, eventsPath);
+    }
+    function replaceState(next) {
+        state.lastSequence = next.lastSequence;
+        state.nodes = next.nodes;
+        state.relations = next.relations;
+        state.feedback = next.feedback;
+        state.decisions = next.decisions;
+        state.events = next.events;
+    }
+    async function enqueue(fn) {
+        const previous = tail;
+        let release;
+        tail = new Promise((resolve) => {
+            release = resolve;
+        });
+        await previous.catch(() => undefined);
+        try {
+            return await fn();
+        }
+        finally {
+            release();
+        }
+    }
+    async function append(event) {
+        return await enqueue(async () => {
+            const fullEvent = { ...event, sequence: state.lastSequence + 1 };
+            applyAionisEvent(cloneReplayState(state), fullEvent);
+            await appendFile(eventsPath, `${JSON.stringify(fullEvent)}\n`, "utf8");
+            applyAionisEvent(state, fullEvent);
+            await persistSnapshot();
+            return fullEvent;
+        });
+    }
+    function nodeRelations(scope, nodeId) {
+        return Array.from(state.relations.values()).filter((relation) => relation.scope === scope && relation.targetId === nodeId);
+    }
+    function reasonsFor(node) {
+        const incoming = nodeRelations(node.scope, node.id);
+        const blockingRelation = incoming.find((relation) => relation.confidence >= 0.65 && relationBlocksDirectUse(relation.kind));
+        if (blockingRelation) {
+            return {
+                action: "do_not_use",
+                reasons: [{
+                        code: "blocked_by_relation",
+                        detail: `${blockingRelation.kind} relation reached confidence ${blockingRelation.confidence}`,
+                        relationId: blockingRelation.id,
+                    }],
+            };
+        }
+        const rehydrateRelation = incoming.find((relation) => relation.confidence >= 0.55 && relationRequiresRehydrate(relation.kind));
+        if (node.lifecycle === "archived" || node.lifecycle === "rehydrate_required" || rehydrateRelation) {
+            return {
+                action: "rehydrate",
+                reasons: [{
+                        code: rehydrateRelation ? "relation_requires_payload" : "payload_required",
+                        detail: rehydrateRelation
+                            ? `${rehydrateRelation.kind} relation requests payload recovery`
+                            : "memory is archived or marked as requiring payload rehydration",
+                        relationId: rehydrateRelation?.id,
+                    }],
+            };
+        }
+        if (node.lifecycle === "suppressed" || node.lifecycle === "retired" || node.lifecycle === "blocked" || node.authority === "rejected") {
+            return {
+                action: "do_not_use",
+                reasons: [{
+                        code: "lifecycle_blocks_direct_use",
+                        detail: `lifecycle=${node.lifecycle}, authority=${node.authority}`,
+                    }],
+            };
+        }
+        if (node.lifecycle === "active" && (node.authority === "trusted" || node.authority === "verified")) {
+            return {
+                action: "use_now",
+                reasons: [{
+                        code: "active_authoritative_memory",
+                        detail: `lifecycle=${node.lifecycle}, authority=${node.authority}`,
+                    }],
+            };
+        }
+        return {
+            action: "inspect_before_use",
+            reasons: [{
+                    code: "insufficient_authority",
+                    detail: `lifecycle=${node.lifecycle}, authority=${node.authority}`,
+                }],
+        };
+    }
+    function buildContext(input) {
+        const maxPerBucket = input.maxPerBucket ?? Number.POSITIVE_INFINITY;
+        const buckets = {
+            use_now: [],
+            inspect_before_use: [],
+            do_not_use: [],
+            rehydrate: [],
+        };
+        const decisions = [];
+        for (const node of sortNodes(Array.from(state.nodes.values()).filter((item) => item.scope === input.scope))) {
+            const decision = reasonsFor(node);
+            decisions.push({ memoryId: node.id, action: decision.action, reasons: decision.reasons });
+            buckets[decision.action].push(node);
+        }
+        for (const action of Object.keys(buckets)) {
+            buckets[action] = buckets[action].slice(0, maxPerBucket);
+        }
+        const trace = {
+            id: randomUUID(),
+            scope: input.scope,
+            query: input.query ?? null,
+            decisions,
+            createdAt: isoNow(),
+        };
+        return {
+            scope: input.scope,
+            use_now: buckets.use_now,
+            inspect_before_use: buckets.inspect_before_use,
+            do_not_use: buckets.do_not_use,
+            rehydrate: buckets.rehydrate,
+            decision_trace: trace,
+        };
+    }
+    return {
+        async getStoreInfo() {
+            return {
+                adapter: "file",
+                schemaVersion: CURRENT_SCHEMA_VERSION,
+                lastSequence: state.lastSequence,
+                eventCount: state.events.length,
+            };
+        },
+        async compact() {
+            return await enqueue(async () => {
+                const beforeEvents = [...state.events];
+                const before = {
+                    eventCount: beforeEvents.length,
+                    lastSequence: state.lastSequence,
+                    eventsSha256: checksumAionisEvents(beforeEvents),
+                };
+                if (beforeEvents.length === 0) {
+                    return {
+                        adapter: "file",
+                        schemaVersion: CURRENT_SCHEMA_VERSION,
+                        compacted: false,
+                        before,
+                        after: {
+                            eventCount: 0,
+                            lastSequence: 0,
+                            checkpointEventId: null,
+                        },
+                    };
+                }
+                const checkpoint = {
+                    id: randomUUID(),
+                    sequence: 1,
+                    type: "substrate.checkpoint.created",
+                    createdAt: isoNow(),
+                    payload: {
+                        schemaVersion: CURRENT_SCHEMA_VERSION,
+                        coveredEventCount: beforeEvents.length,
+                        coveredLastSequence: state.lastSequence,
+                        coveredEventsSha256: before.eventsSha256,
+                        state: {
+                            nodes: Array.from(state.nodes.values()),
+                            relations: Array.from(state.relations.values()),
+                            feedback: Array.from(state.feedback.values()),
+                            decisions: Array.from(state.decisions.values()),
+                        },
+                    },
+                };
+                const compactedState = emptyReplayState();
+                applyAionisEvent(compactedState, checkpoint);
+                await replaceEventLog([checkpoint]);
+                replaceState(compactedState);
+                await persistSnapshot();
+                return {
+                    adapter: "file",
+                    schemaVersion: CURRENT_SCHEMA_VERSION,
+                    compacted: true,
+                    before,
+                    after: {
+                        eventCount: state.events.length,
+                        lastSequence: state.lastSequence,
+                        checkpointEventId: checkpoint.id,
+                    },
+                };
+            });
+        },
+        async putNode(input) {
+            const ts = isoNow();
+            const id = input.id ?? randomUUID();
+            const existing = state.nodes.get(eventKey(input.scope, id));
+            const createdAt = existing?.createdAt ?? input.createdAt ?? ts;
+            const updatedAt = input.updatedAt ?? ts;
+            const node = {
+                id: requireNonEmpty(id, "memory id"),
+                scope: requireNonEmpty(input.scope, "scope"),
+                kind: input.kind,
+                title: input.title ?? existing?.title ?? null,
+                summary: requireNonEmpty(input.summary, "summary"),
+                lifecycle: input.lifecycle ?? existing?.lifecycle ?? "candidate",
+                authority: input.authority ?? existing?.authority ?? "unknown",
+                confidence: clampConfidence(input.confidence ?? existing?.confidence ?? 0.5),
+                targetFiles: normalizeStrings(input.targetFiles ?? existing?.targetFiles),
+                payloadRef: input.payloadRef ?? existing?.payloadRef ?? null,
+                agentId: input.agentId ?? existing?.agentId ?? null,
+                teamId: input.teamId ?? existing?.teamId ?? null,
+                metadata: input.metadata ?? existing?.metadata ?? {},
+                createdAt,
+                updatedAt,
+            };
+            await append({
+                id: randomUUID(),
+                type: "memory.node.upsert",
+                createdAt: ts,
+                payload: node,
+            });
+            return node;
+        },
+        async transitionLifecycle(input) {
+            const ts = isoNow();
+            await append({
+                id: randomUUID(),
+                type: "memory.lifecycle.transition",
+                createdAt: ts,
+                payload: {
+                    scope: requireNonEmpty(input.scope, "scope"),
+                    memoryId: requireNonEmpty(input.memoryId, "memoryId"),
+                    lifecycle: input.lifecycle,
+                    authority: input.authority,
+                    confidence: input.confidence === undefined ? undefined : clampConfidence(input.confidence),
+                    reason: requireNonEmpty(input.reason, "reason"),
+                },
+            });
+            const node = state.nodes.get(eventKey(input.scope, input.memoryId));
+            if (!node)
+                throw new Error(`missing memory node after lifecycle transition: ${input.memoryId}`);
+            return node;
+        },
+        async putRelation(input) {
+            const ts = isoNow();
+            const relation = {
+                id: requireNonEmpty(input.id ?? randomUUID(), "relation id"),
+                scope: requireNonEmpty(input.scope, "scope"),
+                kind: input.kind,
+                sourceId: requireNonEmpty(input.sourceId, "sourceId"),
+                targetId: requireNonEmpty(input.targetId, "targetId"),
+                confidence: clampConfidence(input.confidence ?? 0.7),
+                reasons: normalizeStrings(input.reasons),
+                metadata: input.metadata ?? {},
+                createdAt: input.createdAt ?? ts,
+            };
+            await append({
+                id: randomUUID(),
+                type: "memory.relation.upsert",
+                createdAt: ts,
+                payload: relation,
+            });
+            return relation;
+        },
+        async recordFeedback(input) {
+            const ts = isoNow();
+            const feedback = {
+                id: requireNonEmpty(input.id ?? randomUUID(), "feedback id"),
+                scope: requireNonEmpty(input.scope, "scope"),
+                memoryId: requireNonEmpty(input.memoryId, "memoryId"),
+                outcome: input.outcome,
+                strength: input.strength,
+                runId: input.runId ?? null,
+                evidenceRef: input.evidenceRef ?? null,
+                createdAt: input.createdAt ?? ts,
+            };
+            await append({
+                id: randomUUID(),
+                type: "memory.feedback.recorded",
+                createdAt: ts,
+                payload: feedback,
+            });
+            return feedback;
+        },
+        async recordDecision(input) {
+            const trace = {
+                id: requireNonEmpty(input.id ?? randomUUID(), "decision trace id"),
+                scope: requireNonEmpty(input.scope, "scope"),
+                query: input.query ?? null,
+                decisions: input.decisions,
+                createdAt: input.createdAt ?? isoNow(),
+            };
+            await append({
+                id: randomUUID(),
+                type: "memory.decision.recorded",
+                createdAt: trace.createdAt,
+                payload: trace,
+            });
+            return trace;
+        },
+        async previewContext(input) {
+            return buildContext(input);
+        },
+        async compileContext(input) {
+            const context = buildContext(input);
+            await append({
+                id: randomUUID(),
+                type: "memory.decision.recorded",
+                createdAt: context.decision_trace.createdAt,
+                payload: context.decision_trace,
+            });
+            return context;
+        },
+        async getNode(scope, id) {
+            return state.nodes.get(eventKey(scope, id)) ?? null;
+        },
+        async listNodes(scope) {
+            return sortNodes(Array.from(state.nodes.values()).filter((node) => node.scope === scope));
+        },
+        async searchNodes(input) {
+            return searchMemoryNodes(Array.from(state.nodes.values()), input);
+        },
+        async listRelations(scope) {
+            return Array.from(state.relations.values()).filter((relation) => relation.scope === scope);
+        },
+        async listEvents() {
+            return [...state.events];
+        },
+        async close() {
+            await tail.catch(() => undefined);
+        },
+    };
+}
+//# sourceMappingURL=file-substrate.js.map

package/dist/file-substrate.js.map

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package/dist/index.d.ts

@@ -0,0 +1,9 @@
+export * from "./types.ts";
+export { openFileAionisSubstrate, type FileAionisSubstrateOptions } from "./file-substrate.ts";
+export { openSqliteAionisSubstrate, type SqliteAionisSubstrateOptions } from "./sqlite-substrate.ts";
+export { AIONIS_SUBSTRATE_BACKUP_FORMAT, AIONIS_SUBSTRATE_BACKUP_VERSION, exportAionisSubstrateBackup, readAionisSubstrateBackupFile, restoreAionisSubstrateBackupToFile, restoreAionisSubstrateBackupToSqlite, verifyAionisSubstrateBackup, writeAionisSubstrateBackupFile, type AionisSubstrateBackup, type AionisSubstrateBackupIntegrityReport, type RestoreAionisSubstrateBackupOptions, } from "./backup.ts";
+export { importRuntimeLiteSnapshot, type RuntimeSnapshotImportOptions, type RuntimeSnapshotImportSummary, } from "./runtime-snapshot-importer.ts";
+export { compareSurfaces, extractRuntimeReferenceSurfaces, runRuntimeSnapshotParity, type RuntimeReferenceSurfaces, type RuntimeSnapshotParityBucket, type RuntimeSnapshotParityOptions, type RuntimeSnapshotParityReport, } from "./runtime-snapshot-parity.ts";
+export { runRuntimeSnapshotCorpus, type RuntimeSnapshotCorpusOptions, type RuntimeSnapshotCorpusReport, type RuntimeSnapshotCorpusScopeCandidate, type RuntimeSnapshotCorpusScopeReport, } from "./runtime-snapshot-corpus.ts";
+export { runRuntimeReferenceCorpus, type RuntimeReferenceCandidate, type RuntimeReferenceCorpusMatchedReport, type RuntimeReferenceCorpusOptions, type RuntimeReferenceCorpusReport, type RuntimeReferenceCorpusUnmatchedReport, type RuntimeReferenceScopeCandidate, } from "./runtime-reference-corpus.ts";
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/index.js

@@ -0,0 +1,9 @@
+export * from "./types.js";
+export { openFileAionisSubstrate } from "./file-substrate.js";
+export { openSqliteAionisSubstrate } from "./sqlite-substrate.js";
+export { AIONIS_SUBSTRATE_BACKUP_FORMAT, AIONIS_SUBSTRATE_BACKUP_VERSION, exportAionisSubstrateBackup, readAionisSubstrateBackupFile, restoreAionisSubstrateBackupToFile, restoreAionisSubstrateBackupToSqlite, verifyAionisSubstrateBackup, writeAionisSubstrateBackupFile, } from "./backup.js";
+export { importRuntimeLiteSnapshot, } from "./runtime-snapshot-importer.js";
+export { compareSurfaces, extractRuntimeReferenceSurfaces, runRuntimeSnapshotParity, } from "./runtime-snapshot-parity.js";
+export { runRuntimeSnapshotCorpus, } from "./runtime-snapshot-corpus.js";
+export { runRuntimeReferenceCorpus, } from "./runtime-reference-corpus.js";
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

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package/dist/runtime-reference-corpus.d.ts

@@ -0,0 +1,76 @@
+import { type RuntimeReferenceSurfaces, type RuntimeSnapshotParityBucket } from "./runtime-snapshot-parity.ts";
+export type RuntimeReferenceCandidate = {
+    reference_path: string;
+    id_count: number;
+    ids_sample: string[];
+    surfaces: RuntimeReferenceSurfaces;
+};
+export type RuntimeReferenceScopeCandidate = {
+    source_path: string;
+    scope: string;
+    node_count: number;
+    ids_sample: string[];
+};
+export type RuntimeReferenceCorpusMatchedReport = {
+    reference_path: string;
+    source_path: string;
+    scope: string;
+    status: "passed" | "failed";
+    reference_id_count: number;
+    runtime_scope_node_count: number;
+    overlap_count: number;
+    overlap_ids_sample: string[];
+    parity_exact: boolean | null;
+    bucket_reports: RuntimeSnapshotParityBucket[];
+    error: string | null;
+};
+export type RuntimeReferenceCorpusUnmatchedReport = {
+    reference_path: string;
+    reference_id_count: number;
+    ids_sample: string[];
+    reason: "no_reference_surface_ids" | "no_runtime_scope_overlap";
+};
+export type RuntimeReferenceCorpusReport = {
+    contract_version: "aionis_runtime_reference_corpus_report_v1";
+    generated_at: string;
+    source_roots: string[];
+    reference_roots: string[];
+    options: {
+        max_source_files: number | null;
+        max_scopes: number | null;
+        max_scopes_per_file: number;
+        max_references: number | null;
+        min_nodes: number;
+        min_overlap: number;
+        max_per_bucket: number | null;
+    };
+    discovered_sqlite_files: number;
+    runtime_sqlite_files: number;
+    candidate_scopes: RuntimeReferenceScopeCandidate[];
+    discovered_reference_files: number;
+    reference_files_with_surfaces: number;
+    reference_files_without_surfaces: number;
+    matched_references: number;
+    unmatched_references: number;
+    passed_matches: number;
+    failed_matches: number;
+    exact_matches: number;
+    partial_matches: number;
+    scan_warnings: string[];
+    matched_reports: RuntimeReferenceCorpusMatchedReport[];
+    unmatched_reference_reports: RuntimeReferenceCorpusUnmatchedReport[];
+};
+export type RuntimeReferenceCorpusOptions = {
+    sourceRootPaths: string[];
+    referenceRootPaths: string[];
+    outputPath?: string;
+    maxSourceFiles?: number | null;
+    maxScopes?: number | null;
+    maxScopesPerFile?: number;
+    maxReferences?: number | null;
+    minNodes?: number;
+    minOverlap?: number;
+    maxPerBucket?: number;
+};
+export declare function runRuntimeReferenceCorpus(options: RuntimeReferenceCorpusOptions): Promise<RuntimeReferenceCorpusReport>;
+//# sourceMappingURL=runtime-reference-corpus.d.ts.map

package/dist/runtime-reference-corpus.d.ts.map

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