@agntk/agent-harness 0.1.4 → 0.1.6

package/dist/indexer-LONANRRM.js

@@ -1,16 +0,0 @@
-#!/usr/bin/env node
-
-import {
-  buildIndex,
-  rebuildAllIndexes,
-  writeIndexFile
-} from "./chunk-4FDUOGSZ.js";
-import "./chunk-UPLBF4RZ.js";
-import "./chunk-4CWAGBNS.js";
-import "./chunk-ZZJOFKAT.js";
-export {
-  buildIndex,
-  rebuildAllIndexes,
-  writeIndexFile
-};
-//# sourceMappingURL=indexer-LONANRRM.js.map

package/dist/intelligence-HJOCA4SJ.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/runtime/intelligence.ts"],"sourcesContent":["import { existsSync, readdirSync, readFileSync, statSync } from 'fs';\nimport { join, relative } from 'path';\nimport { loadDirectoryWithErrors, loadDirectory } from '../primitives/loader.js';\nimport { buildDependencyGraph } from './graph.js';\nimport { getPrimitiveDirs } from '../core/types.js';\nimport type { HarnessConfig, HarnessDocument } from '../core/types.js';\nimport { loadConfig } from '../core/config.js';\nimport type { InstinctCandidate } from './instinct-learner.js';\nimport { installInstinct } from './instinct-learner.js';\nimport { log } from '../core/logger.js';\nimport { checkRateLimit } from './rate-limiter.js';\nimport { buildRateLimits } from './guardrails.js';\nimport { checkBudget } from './cost-tracker.js';\nimport { validateHarness } from './validator.js';\n\n// --- Auto-Promote Instincts ---\n\nexport interface PatternOccurrence {\n  behavior: string;\n  journalDates: string[];\n  count: number;\n}\n\nexport interface AutoPromoteResult {\n  patterns: PatternOccurrence[];\n  promoted: string[];\n  skipped: string[];\n  journalsScanned: number;\n}\n\n/**\n * Scan all journals for instinct candidates that appear 3+ times.\n * These repeated patterns suggest strong behavioral signals worth auto-promoting.\n *\n * The function:\n * 1. Reads all journal files\n * 2. Extracts \"## Instinct Candidates\" sections\n * 3. Normalizes behavior text for fuzzy matching\n * 4. Groups by similar behavior (normalized string comparison)\n * 5. Returns patterns with 3+ occurrences across different journal dates\n * 6. Optionally auto-installs promoted instincts\n */\nexport function autoPromoteInstincts(\n  harnessDir: string,\n  options?: { threshold?: number; install?: boolean },\n): AutoPromoteResult {\n  const threshold = options?.threshold ?? 3;\n  const journalDir = join(harnessDir, 'memory', 'journal');\n\n  if (!existsSync(journalDir)) {\n    return { patterns: [], promoted: [], skipped: [], journalsScanned: 0 };\n  }\n\n  const files = readdirSync(journalDir)\n    .filter((f) => f.endsWith('.md') && /^\\d{4}-\\d{2}-\\d{2}/.test(f))\n    .sort();\n\n  // Collect all instinct candidate behaviors with their journal dates\n  const behaviorMap = new Map<string, { original: string; dates: Set<string> }>();\n\n  for (const file of files) {\n    const content = readFileSync(join(journalDir, file), 'utf-8');\n    const dateMatch = file.match(/^(\\d{4}-\\d{2}-\\d{2})/);\n    if (!dateMatch) continue;\n    const journalDate = dateMatch[1];\n\n    // Extract instinct candidates section\n    const sectionMatch = content.match(/## Instinct Candidates\\n([\\s\\S]*?)(?=\\n## |\\n*$)/);\n    if (!sectionMatch) continue;\n\n    const lines = sectionMatch[1]\n      .split('\\n')\n      .filter((l) => l.startsWith('- '))\n      .map((l) => l.slice(2).trim().replace(/^INSTINCT:\\s*/i, ''));\n\n    for (const line of lines) {\n      if (!line) continue;\n      const normalized = normalizeBehavior(line);\n      if (!normalized) continue;\n\n      const existing = behaviorMap.get(normalized);\n      if (existing) {\n        existing.dates.add(journalDate);\n      } else {\n        behaviorMap.set(normalized, { original: line, dates: new Set([journalDate]) });\n      }\n    }\n  }\n\n  // Filter to patterns with threshold+ occurrences across different dates\n  const patterns: PatternOccurrence[] = [];\n  for (const [, value] of behaviorMap) {\n    if (value.dates.size >= threshold) {\n      patterns.push({\n        behavior: value.original,\n        journalDates: [...value.dates].sort(),\n        count: value.dates.size,\n      });\n    }\n  }\n\n  // Sort by count descending\n  patterns.sort((a, b) => b.count - a.count);\n\n  // Deduplicate against existing instincts\n  const existingIds = new Set<string>();\n  const existingBehaviors = new Set<string>();\n  const instinctsDir = join(harnessDir, 'instincts');\n  if (existsSync(instinctsDir)) {\n    const docs = loadDirectory(instinctsDir);\n    for (const doc of docs) {\n      existingIds.add(doc.frontmatter.id);\n      if (doc.l0) existingBehaviors.add(normalizeBehavior(doc.l0));\n    }\n  }\n\n  const promoted: string[] = [];\n  const skipped: string[] = [];\n\n  for (const pattern of patterns) {\n    const normalized = normalizeBehavior(pattern.behavior);\n    const id = behaviorToId(pattern.behavior);\n\n    if (existingIds.has(id) || existingBehaviors.has(normalized)) {\n      skipped.push(id);\n      continue;\n    }\n\n    if (options?.install) {\n      const candidate: InstinctCandidate = {\n        id,\n        behavior: pattern.behavior,\n        provenance: `auto-promote:${pattern.journalDates.length}x across ${pattern.journalDates[0]} to ${pattern.journalDates[pattern.journalDates.length - 1]}`,\n        confidence: Math.min(0.9, 0.5 + pattern.count * 0.1),\n      };\n\n      const path = installInstinct(harnessDir, candidate);\n      if (path) {\n        promoted.push(id);\n      } else {\n        skipped.push(id);\n      }\n    }\n  }\n\n  return { patterns, promoted, skipped, journalsScanned: files.length };\n}\n\n/**\n * Normalize behavior text for fuzzy matching.\n * Lowercases, strips punctuation, collapses whitespace.\n */\nfunction normalizeBehavior(text: string): string {\n  return text\n    .toLowerCase()\n    .replace(/[^a-z0-9\\s]/g, '')\n    .replace(/\\s+/g, ' ')\n    .trim();\n}\n\n/**\n * Convert a behavior string to a kebab-case ID.\n */\nfunction behaviorToId(behavior: string): string {\n  return behavior\n    .toLowerCase()\n    .replace(/[^a-z0-9\\s-]/g, '')\n    .replace(/\\s+/g, '-')\n    .slice(0, 50)\n    .replace(/-+$/, '');\n}\n\n// --- Dead Primitive Detection ---\n\nexport interface DeadPrimitive {\n  id: string;\n  path: string;\n  directory: string;\n  lastModified: string;\n  daysSinceModified: number;\n  reason: string;\n}\n\nexport interface DeadPrimitiveResult {\n  dead: DeadPrimitive[];\n  totalScanned: number;\n  thresholdDays: number;\n}\n\n/**\n * Detect \"dead\" primitives — files that are:\n * 1. Orphaned (no incoming or outgoing references via related:/with:)\n * 2. Not modified in the last N days (default 30)\n *\n * Excludes session and journal directories (memory files).\n * Does NOT flag recently created primitives even if orphaned.\n */\nexport function detectDeadPrimitives(\n  harnessDir: string,\n  config?: HarnessConfig,\n  options?: { thresholdDays?: number },\n): DeadPrimitiveResult {\n  const thresholdDays = options?.thresholdDays ?? 30;\n  const now = Date.now();\n  const thresholdMs = thresholdDays * 24 * 60 * 60 * 1000;\n\n  // Build dependency graph to find orphans\n  const graph = buildDependencyGraph(harnessDir, config);\n  const orphanIds = new Set(graph.orphans);\n\n  // Also find nodes with only broken refs (effectively orphaned)\n  const connectedIds = new Set<string>();\n  for (const edge of graph.edges) {\n    connectedIds.add(edge.from);\n    connectedIds.add(edge.to);\n  }\n\n  const dead: DeadPrimitive[] = [];\n  let totalScanned = 0;\n\n  for (const node of graph.nodes) {\n    totalScanned++;\n\n    // Skip non-orphans\n    if (!orphanIds.has(node.id)) continue;\n\n    // Check file modification time\n    const absPath = join(harnessDir, node.path);\n    if (!existsSync(absPath)) continue;\n\n    try {\n      const stat = statSync(absPath);\n      const mtime = stat.mtime.getTime();\n      const daysSince = Math.floor((now - mtime) / (24 * 60 * 60 * 1000));\n\n      if (daysSince >= thresholdDays) {\n        dead.push({\n          id: node.id,\n          path: node.path,\n          directory: node.directory,\n          lastModified: stat.mtime.toISOString().split('T')[0],\n          daysSinceModified: daysSince,\n          reason: `Orphaned (no references) and not modified in ${daysSince} days`,\n        });\n      }\n    } catch (err) {\n      log.warn(`Failed to stat ${absPath}: ${err instanceof Error ? err.message : String(err)}`);\n    }\n  }\n\n  // Sort by days since modified (most stale first)\n  dead.sort((a, b) => b.daysSinceModified - a.daysSinceModified);\n\n  return { dead, totalScanned, thresholdDays };\n}\n\n// --- Contradiction Detection ---\n\nexport interface Contradiction {\n  primitiveA: { id: string; path: string; type: string; text: string };\n  primitiveB: { id: string; path: string; type: string; text: string };\n  reason: string;\n  severity: 'low' | 'medium' | 'high';\n}\n\nexport interface ContradictionResult {\n  contradictions: Contradiction[];\n  rulesChecked: number;\n  instinctsChecked: number;\n}\n\n/**\n * Detect contradictions between rules and instincts.\n *\n * Checks for:\n * 1. Direct negation patterns (\"always X\" vs \"never X\", \"do X\" vs \"don't X\")\n * 2. Conflicting tag overlap with opposing behavioral signals\n * 3. Same topic with contradictory directives\n *\n * This is a heuristic-based detector (no LLM needed).\n * Returns candidate contradictions for human review.\n */\nexport function detectContradictions(\n  harnessDir: string,\n): ContradictionResult {\n  const rulesDir = join(harnessDir, 'rules');\n  const instinctsDir = join(harnessDir, 'instincts');\n\n  const rules: HarnessDocument[] = existsSync(rulesDir) ? loadDirectory(rulesDir) : [];\n  const instincts: HarnessDocument[] = existsSync(instinctsDir) ? loadDirectory(instinctsDir) : [];\n\n  const contradictions: Contradiction[] = [];\n\n  // Build a lookup of behavioral directives from each document\n  const ruleDirectives = rules.map((doc) => ({\n    doc,\n    directives: extractDirectives(doc),\n    topics: extractTopics(doc),\n  }));\n\n  const instinctDirectives = instincts.map((doc) => ({\n    doc,\n    directives: extractDirectives(doc),\n    topics: extractTopics(doc),\n  }));\n\n  // Cross-check rules vs instincts\n  for (const rule of ruleDirectives) {\n    for (const instinct of instinctDirectives) {\n      // Check directive negation patterns\n      for (const rd of rule.directives) {\n        for (const id of instinct.directives) {\n          const negation = checkNegation(rd, id);\n          if (negation) {\n            contradictions.push({\n              primitiveA: {\n                id: rule.doc.frontmatter.id,\n                path: relative(harnessDir, rule.doc.path),\n                type: 'rule',\n                text: rd.raw,\n              },\n              primitiveB: {\n                id: instinct.doc.frontmatter.id,\n                path: relative(harnessDir, instinct.doc.path),\n                type: 'instinct',\n                text: id.raw,\n              },\n              reason: negation,\n              severity: 'high',\n            });\n          }\n        }\n      }\n\n      // Check topic conflicts (same topic, opposing signals)\n      const sharedTopics = rule.topics.filter((t) => instinct.topics.includes(t));\n      if (sharedTopics.length > 0) {\n        // Check if one says \"always\" and other says \"never\" about shared topic\n        const ruleText = (rule.doc.l0 + ' ' + rule.doc.body).toLowerCase();\n        const instinctText = (instinct.doc.l0 + ' ' + instinct.doc.body).toLowerCase();\n\n        for (const topic of sharedTopics) {\n          const ruleHasAlways = hasPositiveDirective(ruleText, topic);\n          const instinctHasNever = hasNegativeDirective(instinctText, topic);\n          const ruleHasNever = hasNegativeDirective(ruleText, topic);\n          const instinctHasAlways = hasPositiveDirective(instinctText, topic);\n\n          if ((ruleHasAlways && instinctHasNever) || (ruleHasNever && instinctHasAlways)) {\n            // Avoid duplicate if already caught by directive check\n            const alreadyCaught = contradictions.some(\n              (c) =>\n                c.primitiveA.id === rule.doc.frontmatter.id &&\n                c.primitiveB.id === instinct.doc.frontmatter.id,\n            );\n            if (!alreadyCaught) {\n              contradictions.push({\n                primitiveA: {\n                  id: rule.doc.frontmatter.id,\n                  path: relative(harnessDir, rule.doc.path),\n                  type: 'rule',\n                  text: rule.doc.l0 || rule.doc.frontmatter.id,\n                },\n                primitiveB: {\n                  id: instinct.doc.frontmatter.id,\n                  path: relative(harnessDir, instinct.doc.path),\n                  type: 'instinct',\n                  text: instinct.doc.l0 || instinct.doc.frontmatter.id,\n                },\n                reason: `Conflicting directives about \"${topic}\"`,\n                severity: 'medium',\n              });\n            }\n          }\n        }\n      }\n    }\n  }\n\n  // Also check rules vs rules and instincts vs instincts\n  checkIntraGroupContradictions(ruleDirectives, 'rule', harnessDir, contradictions);\n  checkIntraGroupContradictions(instinctDirectives, 'instinct', harnessDir, contradictions);\n\n  return {\n    contradictions,\n    rulesChecked: rules.length,\n    instinctsChecked: instincts.length,\n  };\n}\n\ninterface Directive {\n  action: 'positive' | 'negative';\n  verb: string;\n  subject: string;\n  raw: string;\n}\n\n/**\n * Extract behavioral directives from a document.\n * Looks for patterns like \"always X\", \"never Y\", \"do X\", \"don't Y\", \"avoid X\", \"prefer Y\".\n */\nfunction extractDirectives(doc: HarnessDocument): Directive[] {\n  const directives: Directive[] = [];\n  const text = (doc.l0 + '\\n' + doc.body).trim();\n\n  // Process line by line\n  for (const line of text.split('\\n')) {\n    const trimmed = line.trim().toLowerCase();\n    if (!trimmed || trimmed.startsWith('#')) continue;\n\n    // Strip list markers\n    const cleaned = trimmed.replace(/^[-*]\\s+/, '').replace(/^\\d+\\.\\s+/, '');\n\n    // Positive patterns\n    const positiveMatch = cleaned.match(\n      /^(always|must|should|prefer|ensure|require|use)\\s+(.+)/,\n    );\n    if (positiveMatch) {\n      directives.push({\n        action: 'positive',\n        verb: positiveMatch[1],\n        subject: positiveMatch[2].replace(/[.!]$/, ''),\n        raw: cleaned,\n      });\n      continue;\n    }\n\n    // Negative patterns\n    const negativeMatch = cleaned.match(\n      /^(never|don'?t|avoid|do not|must not|should not|shouldn'?t)\\s+(.+)/,\n    );\n    if (negativeMatch) {\n      directives.push({\n        action: 'negative',\n        verb: negativeMatch[1],\n        subject: negativeMatch[2].replace(/[.!]$/, ''),\n        raw: cleaned,\n      });\n    }\n  }\n\n  return directives;\n}\n\n/**\n * Extract topic keywords from a document (from tags, ID, and L0).\n */\nfunction extractTopics(doc: HarnessDocument): string[] {\n  const topics: string[] = [];\n\n  // Tags as topics\n  for (const tag of doc.frontmatter.tags) {\n    topics.push(tag.toLowerCase());\n  }\n\n  // ID words as topics\n  const idParts = doc.frontmatter.id.split('-').filter((p) => p.length > 2);\n  topics.push(...idParts.map((p) => p.toLowerCase()));\n\n  return [...new Set(topics)];\n}\n\n/**\n * Check if two directives are negations of each other.\n */\nfunction checkNegation(a: Directive, b: Directive): string | null {\n  // One positive, one negative\n  if (a.action === b.action) return null;\n\n  // Normalize subjects for comparison\n  const subA = a.subject.toLowerCase().replace(/\\s+/g, ' ').trim();\n  const subB = b.subject.toLowerCase().replace(/\\s+/g, ' ').trim();\n\n  // Direct subject match\n  if (subA === subB) {\n    return `Direct contradiction: \"${a.raw}\" vs \"${b.raw}\"`;\n  }\n\n  // Fuzzy match: check if one subject is a substring of the other (with word boundaries)\n  const wordsA = subA.split(' ').filter((w) => w.length > 3);\n  const wordsB = subB.split(' ').filter((w) => w.length > 3);\n  const overlap = wordsA.filter((w) => wordsB.includes(w));\n\n  if (overlap.length >= 2 && overlap.length >= Math.min(wordsA.length, wordsB.length) * 0.6) {\n    return `Likely contradiction (shared terms: ${overlap.join(', ')}): \"${a.raw}\" vs \"${b.raw}\"`;\n  }\n\n  return null;\n}\n\nfunction hasPositiveDirective(text: string, topic: string): boolean {\n  const patterns = [\n    new RegExp(`always\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`must\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`should\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`prefer\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`use\\\\s+\\\\w*${topic}`, 'i'),\n  ];\n  return patterns.some((p) => p.test(text));\n}\n\nfunction hasNegativeDirective(text: string, topic: string): boolean {\n  const patterns = [\n    new RegExp(`never\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`avoid\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`don'?t\\\\s+\\\\w*${topic}`, 'i'),\n    new RegExp(`do not\\\\s+\\\\w*${topic}`, 'i'),\n  ];\n  return patterns.some((p) => p.test(text));\n}\n\nfunction checkIntraGroupContradictions(\n  group: Array<{ doc: HarnessDocument; directives: Directive[]; topics: string[] }>,\n  type: string,\n  harnessDir: string,\n  contradictions: Contradiction[],\n): void {\n  for (let i = 0; i < group.length; i++) {\n    for (let j = i + 1; j < group.length; j++) {\n      const a = group[i];\n      const b = group[j];\n\n      for (const da of a.directives) {\n        for (const db of b.directives) {\n          const negation = checkNegation(da, db);\n          if (negation) {\n            contradictions.push({\n              primitiveA: {\n                id: a.doc.frontmatter.id,\n                path: relative(harnessDir, a.doc.path),\n                type,\n                text: da.raw,\n              },\n              primitiveB: {\n                id: b.doc.frontmatter.id,\n                path: relative(harnessDir, b.doc.path),\n                type,\n                text: db.raw,\n              },\n              reason: negation,\n              severity: 'medium',\n            });\n          }\n        }\n      }\n    }\n  }\n}\n\n// --- Session Enrichment ---\n\nexport interface SessionEnrichment {\n  sessionId: string;\n  topics: string[];\n  tokenCount: number;\n  stepCount: number;\n  model: string;\n  toolsUsed: string[];\n  primitivesReferenced: string[];\n  duration: string;\n}\n\nexport interface EnrichmentResult {\n  enriched: SessionEnrichment[];\n  sessionsScanned: number;\n}\n\n/**\n * Enrich sessions with extracted metadata.\n *\n * Scans session files and extracts:\n * - Topics (from prompt text, frequent nouns, matched primitive IDs)\n * - Token/step counts (from frontmatter or markdown body)\n * - Model used\n * - Tools used (from tool call sections)\n * - Referenced primitives (IDs mentioned in session text)\n * - Duration\n */\nexport function enrichSessions(\n  harnessDir: string,\n  config?: HarnessConfig,\n  options?: { from?: string; to?: string },\n): EnrichmentResult {\n  const sessionsDir = join(harnessDir, 'memory', 'sessions');\n  if (!existsSync(sessionsDir)) {\n    return { enriched: [], sessionsScanned: 0 };\n  }\n\n  // Load all primitive IDs for cross-reference\n  const primitiveIds = new Set<string>();\n  const dirs = getPrimitiveDirs(config);\n  for (const dir of dirs) {\n    const fullPath = join(harnessDir, dir);\n    if (!existsSync(fullPath)) continue;\n    const { docs } = loadDirectoryWithErrors(fullPath);\n    for (const doc of docs) {\n      primitiveIds.add(doc.frontmatter.id);\n    }\n  }\n\n  const files = readdirSync(sessionsDir)\n    .filter((f) => f.endsWith('.md') && !f.startsWith('.') && !f.startsWith('_'))\n    .sort();\n\n  // Filter by date range\n  const filtered = files.filter((f) => {\n    if (!options?.from && !options?.to) return true;\n    const dateMatch = f.match(/^(\\d{4}-\\d{2}-\\d{2})/);\n    if (!dateMatch) return false;\n    const d = dateMatch[1];\n    if (options?.from && d < options.from) return false;\n    if (options?.to && d > options.to) return false;\n    return true;\n  });\n\n  const enriched: SessionEnrichment[] = [];\n\n  for (const file of filtered) {\n    const content = readFileSync(join(sessionsDir, file), 'utf-8');\n    const sessionId = file.replace(/\\.md$/, '');\n\n    const enrichment = enrichSession(content, sessionId, primitiveIds);\n    enriched.push(enrichment);\n  }\n\n  return { enriched, sessionsScanned: filtered.length };\n}\n\nfunction enrichSession(\n  content: string,\n  sessionId: string,\n  primitiveIds: Set<string>,\n): SessionEnrichment {\n  // Extract metadata from frontmatter/body\n  const tokensMatch = content.match(/[Tt]okens?[:\\s]+(\\d[\\d,]*)/);\n  const tokenCount = tokensMatch ? parseInt(tokensMatch[1].replace(/,/g, ''), 10) : 0;\n\n  const stepsMatch = content.match(/[Ss]teps?[:\\s]+(\\d+)/);\n  const stepCount = stepsMatch ? parseInt(stepsMatch[1], 10) : 0;\n\n  const modelMatch = content.match(/[Mm]odel[:\\s]+([^\\n]+)/);\n  const model = modelMatch ? modelMatch[1].trim() : 'unknown';\n\n  const durationMatch = content.match(/[Dd]uration[:\\s]+([^\\n]+)/);\n  const duration = durationMatch ? durationMatch[1].trim() : '';\n\n  // Extract tools used from tool call sections\n  const toolsUsed: string[] = [];\n  const toolMatches = content.matchAll(/### Tool(?:\\s+Call)?:\\s*(\\S+)/g);\n  for (const match of toolMatches) {\n    const toolName = match[1];\n    if (!toolsUsed.includes(toolName)) {\n      toolsUsed.push(toolName);\n    }\n  }\n\n  // Also check for tool_calls in frontmatter-style sections\n  const toolCallMatches = content.matchAll(/toolName[:\\s]+[\"']?(\\S+)[\"']?/g);\n  for (const match of toolCallMatches) {\n    const toolName = match[1];\n    if (!toolsUsed.includes(toolName)) {\n      toolsUsed.push(toolName);\n    }\n  }\n\n  // Find referenced primitives (any primitive ID that appears in text)\n  const primitivesReferenced: string[] = [];\n  for (const id of primitiveIds) {\n    if (id.length < 3) continue; // Skip very short IDs to avoid false positives\n    if (content.includes(id)) {\n      primitivesReferenced.push(id);\n    }\n  }\n\n  // Extract topics from prompt section\n  const topics = extractSessionTopics(content);\n\n  return {\n    sessionId,\n    topics,\n    tokenCount,\n    stepCount,\n    model,\n    toolsUsed,\n    primitivesReferenced,\n    duration,\n  };\n}\n\n/**\n * Extract topic keywords from session content.\n * Uses a simple frequency-based approach on meaningful words.\n */\nfunction extractSessionTopics(content: string): string[] {\n  // Extract prompt section specifically\n  const promptMatch = content.match(/## Prompt\\n([\\s\\S]*?)(?=\\n## |$)/);\n  const promptText = promptMatch ? promptMatch[1] : '';\n\n  // Also include summary\n  const summaryMatch = content.match(/## Summary\\n([\\s\\S]*?)(?=\\n## |$)/);\n  const summaryText = summaryMatch ? summaryMatch[1] : '';\n\n  const text = (promptText + ' ' + summaryText).toLowerCase();\n\n  // Common stop words to filter out\n  const stopWords = new Set([\n    'the', 'a', 'an', 'is', 'are', 'was', 'were', 'be', 'been', 'being',\n    'have', 'has', 'had', 'do', 'does', 'did', 'will', 'would', 'could',\n    'should', 'may', 'might', 'shall', 'can', 'need', 'must', 'to', 'of',\n    'in', 'for', 'on', 'with', 'at', 'by', 'from', 'as', 'into', 'about',\n    'like', 'through', 'after', 'before', 'between', 'under', 'during',\n    'and', 'or', 'but', 'not', 'no', 'nor', 'so', 'yet', 'both', 'either',\n    'neither', 'each', 'every', 'all', 'any', 'few', 'more', 'most', 'other',\n    'some', 'such', 'than', 'too', 'very', 'just', 'also', 'this', 'that',\n    'these', 'those', 'it', 'its', 'i', 'me', 'my', 'we', 'our', 'you',\n    'your', 'he', 'she', 'they', 'them', 'their', 'what', 'which', 'who',\n    'when', 'where', 'how', 'why', 'if', 'then', 'else', 'while', 'up',\n    'out', 'off', 'over', 'only', 'own', 'same', 'get', 'got', 'make',\n    'made', 'use', 'used', 'using', 'one', 'two', 'new',\n  ]);\n\n  // Count word frequencies\n  const words = text\n    .replace(/[^a-z0-9\\s-]/g, '')\n    .split(/\\s+/)\n    .filter((w) => w.length > 3 && !stopWords.has(w));\n\n  const freq = new Map<string, number>();\n  for (const word of words) {\n    freq.set(word, (freq.get(word) ?? 0) + 1);\n  }\n\n  // Return top 5 most frequent meaningful words\n  return Array.from(freq.entries())\n    .filter(([, count]) => count >= 1)\n    .sort((a, b) => b[1] - a[1])\n    .slice(0, 5)\n    .map(([word]) => word);\n}\n\n// --- Capability Suggestions ---\n\nexport interface CapabilitySuggestion {\n  topic: string;\n  frequency: number;\n  sessionDates: string[];\n  suggestion: string;\n  suggestedType: 'skill' | 'playbook';\n}\n\nexport interface CapabilitySuggestionResult {\n  suggestions: CapabilitySuggestion[];\n  topicsAnalyzed: number;\n  sessionsScanned: number;\n}\n\n/**\n * Suggest capabilities (skills/playbooks) for frequent session topics\n * that don't have existing coverage.\n *\n * Scans sessions for recurring topics, cross-references against existing\n * skills/playbooks, and suggests new ones for uncovered topics.\n */\nexport function suggestCapabilities(\n  harnessDir: string,\n  config?: HarnessConfig,\n  options?: { minFrequency?: number },\n): CapabilitySuggestionResult {\n  const minFrequency = options?.minFrequency ?? 3;\n\n  // Enrich sessions to get topics\n  const { enriched, sessionsScanned } = enrichSessions(harnessDir, config);\n\n  // Collect topic frequency across sessions\n  const topicOccurrences = new Map<string, Set<string>>();\n  for (const session of enriched) {\n    const dateMatch = session.sessionId.match(/^(\\d{4}-\\d{2}-\\d{2})/);\n    const date = dateMatch ? dateMatch[1] : session.sessionId;\n\n    for (const topic of session.topics) {\n      if (!topicOccurrences.has(topic)) {\n        topicOccurrences.set(topic, new Set());\n      }\n      topicOccurrences.get(topic)!.add(date);\n    }\n  }\n\n  // Load existing skills and playbooks\n  const coveredTopics = new Set<string>();\n  const skillsDir = join(harnessDir, 'skills');\n  const playbooksDir = join(harnessDir, 'playbooks');\n\n  for (const dir of [skillsDir, playbooksDir]) {\n    if (!existsSync(dir)) continue;\n    const docs = loadDirectory(dir);\n    for (const doc of docs) {\n      // Add ID parts as covered topics\n      for (const part of doc.frontmatter.id.split('-')) {\n        if (part.length > 2) coveredTopics.add(part.toLowerCase());\n      }\n      // Add tags as covered topics\n      for (const tag of doc.frontmatter.tags) {\n        coveredTopics.add(tag.toLowerCase());\n      }\n    }\n  }\n\n  // Find frequent uncovered topics\n  const suggestions: CapabilitySuggestion[] = [];\n\n  for (const [topic, dates] of topicOccurrences) {\n    if (dates.size < minFrequency) continue;\n    if (coveredTopics.has(topic)) continue;\n\n    const suggestedType = dates.size >= 5 ? 'playbook' : 'skill';\n    suggestions.push({\n      topic,\n      frequency: dates.size,\n      sessionDates: [...dates].sort(),\n      suggestion: `Create a ${suggestedType} for \"${topic}\" — appeared in ${dates.size} session(s)`,\n      suggestedType,\n    });\n  }\n\n  // Sort by frequency\n  suggestions.sort((a, b) => b.frequency - a.frequency);\n\n  return {\n    suggestions,\n    topicsAnalyzed: topicOccurrences.size,\n    sessionsScanned,\n  };\n}\n\n// --- Failure Taxonomy ---\n\n/**\n * Named failure modes with recovery strategies.\n * Based on common agent failure patterns (context overflow, tool errors,\n * budget exhaustion, hallucination, stale primitives, circular delegation).\n */\nexport type FailureMode =\n  | 'context_overflow'\n  | 'tool_execution_error'\n  | 'budget_exhausted'\n  | 'rate_limited'\n  | 'llm_timeout'\n  | 'llm_error'\n  | 'hallucination_detected'\n  | 'stale_primitive'\n  | 'circular_delegation'\n  | 'missing_dependency'\n  | 'parse_error'\n  | 'config_invalid'\n  | 'mcp_connection_failed'\n  | 'state_corruption'\n  | 'unknown';\n\nexport interface FailureRecord {\n  mode: FailureMode;\n  timestamp: string;\n  sessionId?: string;\n  message: string;\n  context?: Record<string, unknown>;\n  recoveryAttempted?: string;\n  recovered: boolean;\n}\n\nexport interface FailureTaxonomy {\n  modes: Record<FailureMode, {\n    description: string;\n    severity: 'low' | 'medium' | 'high' | 'critical';\n    recoveryStrategies: string[];\n    autoRecoverable: boolean;\n  }>;\n}\n\n/**\n * The canonical failure taxonomy for agent-harness.\n * Each mode has a description, severity level, recovery strategies,\n * and whether automatic recovery is possible.\n */\nexport const FAILURE_TAXONOMY: FailureTaxonomy = {\n  modes: {\n    context_overflow: {\n      description: 'System prompt + conversation exceeds model context window',\n      severity: 'high',\n      recoveryStrategies: [\n        'Trim oldest messages from conversation history',\n        'Reduce primitive loading level (L2 → L1 → L0)',\n        'Archive old sessions to free memory budget',\n        'Split into sub-conversations with summarized context',\n      ],\n      autoRecoverable: true,\n    },\n    tool_execution_error: {\n      description: 'An MCP or HTTP tool call failed during execution',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Retry with exponential backoff',\n        'Fall back to alternative tool if available',\n        'Report error to LLM and ask for alternative approach',\n        'Skip tool and proceed with available context',\n      ],\n      autoRecoverable: true,\n    },\n    budget_exhausted: {\n      description: 'Daily or monthly spending limit has been reached',\n      severity: 'critical',\n      recoveryStrategies: [\n        'Wait until next budget period',\n        'Switch to cheaper model (fast_model or summary_model)',\n        'Queue non-urgent tasks for later execution',\n        'Alert operator to increase budget',\n      ],\n      autoRecoverable: false,\n    },\n    rate_limited: {\n      description: 'LLM API rate limit hit (per-minute/hour/day)',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Wait for retryAfterMs from rate limiter',\n        'Reduce request frequency',\n        'Queue and batch requests',\n      ],\n      autoRecoverable: true,\n    },\n    llm_timeout: {\n      description: 'LLM API call timed out without response',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Retry with same prompt',\n        'Retry with shorter prompt (reduce context)',\n        'Switch to faster model',\n        'Increase timeout_ms in config',\n      ],\n      autoRecoverable: true,\n    },\n    llm_error: {\n      description: 'LLM API returned an error response (4xx/5xx)',\n      severity: 'high',\n      recoveryStrategies: [\n        'Retry with exponential backoff (max_retries in config)',\n        'Switch to fallback model',\n        'Check API key validity',\n        'Log error details for debugging',\n      ],\n      autoRecoverable: true,\n    },\n    hallucination_detected: {\n      description: 'LLM output contains fabricated facts or references to non-existent primitives',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Re-prompt with explicit grounding: \"Only reference primitives that exist\"',\n        'Validate output against known primitive IDs',\n        'Add validation step before acting on LLM output',\n        'Record in journal for future training',\n      ],\n      autoRecoverable: false,\n    },\n    stale_primitive: {\n      description: 'A referenced primitive is outdated, deprecated, or orphaned',\n      severity: 'low',\n      recoveryStrategies: [\n        'Run detectDeadPrimitives() to identify stale files',\n        'Archive deprecated primitives',\n        'Update references to point to current versions',\n        'Auto-flag via validator',\n      ],\n      autoRecoverable: true,\n    },\n    circular_delegation: {\n      description: 'Agent delegation loop detected (A delegates to B delegates to A)',\n      severity: 'high',\n      recoveryStrategies: [\n        'Track delegation chain and break on cycle detection',\n        'Set max delegation depth (default: 3)',\n        'Return partial result from last agent in chain',\n        'Log delegation graph for debugging',\n      ],\n      autoRecoverable: true,\n    },\n    missing_dependency: {\n      description: 'A required dependency (primitive, MCP server, API key) is missing',\n      severity: 'high',\n      recoveryStrategies: [\n        'Run doctorHarness() to auto-fix missing files',\n        'Check .env for required API keys',\n        'Install missing MCP servers',\n        'Prompt user to install missing bundle',\n      ],\n      autoRecoverable: false,\n    },\n    parse_error: {\n      description: 'A primitive file has invalid YAML frontmatter or malformed content',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Run fixCapability() to auto-repair frontmatter',\n        'Skip the malformed file and log a warning',\n        'Use default frontmatter values',\n        'Report to user for manual fix',\n      ],\n      autoRecoverable: true,\n    },\n    config_invalid: {\n      description: 'config.yaml fails schema validation',\n      severity: 'critical',\n      recoveryStrategies: [\n        'Fall back to CONFIG_DEFAULTS',\n        'Report specific validation errors to user',\n        'Run harness doctor to attempt repair',\n      ],\n      autoRecoverable: false,\n    },\n    mcp_connection_failed: {\n      description: 'Failed to connect to an MCP server (process spawn or HTTP)',\n      severity: 'medium',\n      recoveryStrategies: [\n        'Retry connection with backoff',\n        'Disable the server and continue without its tools',\n        'Check command/URL/env configuration',\n        'Fall back to built-in tools only',\n      ],\n      autoRecoverable: true,\n    },\n    state_corruption: {\n      description: 'state.md is unreadable or contains invalid data',\n      severity: 'high',\n      recoveryStrategies: [\n        'Fall back to DEFAULT_STATE',\n        'Rebuild state from session history',\n        'Reset state.md and log the event',\n      ],\n      autoRecoverable: true,\n    },\n    unknown: {\n      description: 'An unclassified error occurred',\n      severity: 'high',\n      recoveryStrategies: [\n        'Log full error with stack trace',\n        'Record in health.json failure counter',\n        'Alert operator',\n        'Graceful shutdown if critical path',\n      ],\n      autoRecoverable: false,\n    },\n  },\n};\n\nexport interface FailureAnalysis {\n  recentFailures: FailureRecord[];\n  modeFrequency: Record<string, number>;\n  mostCommonMode: FailureMode | null;\n  suggestedRecovery: string[];\n  healthImplication: 'healthy' | 'degraded' | 'unhealthy';\n}\n\n/**\n * Classify an error into a failure mode.\n */\nexport function classifyFailure(error: Error | string, context?: Record<string, unknown>): FailureMode {\n  const msg = typeof error === 'string' ? error.toLowerCase() : error.message.toLowerCase();\n\n  if (msg.includes('context') && (msg.includes('overflow') || msg.includes('too long') || msg.includes('exceed'))) {\n    return 'context_overflow';\n  }\n  if (msg.includes('tool') && (msg.includes('fail') || msg.includes('error') || msg.includes('timeout'))) {\n    return 'tool_execution_error';\n  }\n  if (msg.includes('budget') || msg.includes('spending') || msg.includes('limit exceeded')) {\n    return 'budget_exhausted';\n  }\n  if (msg.includes('rate limit') || msg.includes('429') || msg.includes('too many requests')) {\n    return 'rate_limited';\n  }\n  if (msg.includes('timeout') || msg.includes('timed out') || msg.includes('ETIMEDOUT')) {\n    return 'llm_timeout';\n  }\n  if (msg.includes('mcp') && (msg.includes('connect') || msg.includes('spawn') || msg.includes('failed'))) {\n    return 'mcp_connection_failed';\n  }\n  if (msg.includes('parse') || msg.includes('yaml') || msg.includes('frontmatter') || msg.includes('malformed')) {\n    return 'parse_error';\n  }\n  if (msg.includes('config') && (msg.includes('invalid') || msg.includes('validation'))) {\n    return 'config_invalid';\n  }\n  if (msg.includes('state') && (msg.includes('corrupt') || msg.includes('invalid') || msg.includes('unreadable'))) {\n    return 'state_corruption';\n  }\n  if (msg.includes('circular') || msg.includes('delegation loop') || msg.includes('cycle')) {\n    return 'circular_delegation';\n  }\n  if (msg.includes('missing') || msg.includes('not found') || msg.includes('dependency')) {\n    return 'missing_dependency';\n  }\n  if (msg.includes('401') || msg.includes('403') || msg.includes('500') || msg.includes('502') || msg.includes('503')) {\n    return 'llm_error';\n  }\n\n  return 'unknown';\n}\n\n/**\n * Get recovery strategies for a failure mode.\n */\nexport function getRecoveryStrategies(mode: FailureMode): string[] {\n  return FAILURE_TAXONOMY.modes[mode]?.recoveryStrategies ?? ['Log error and alert operator'];\n}\n\n/**\n * Analyze failure patterns from session history and health data.\n * Returns frequency analysis and recovery suggestions.\n */\nexport function analyzeFailures(\n  harnessDir: string,\n  options?: { days?: number },\n): FailureAnalysis {\n  const days = options?.days ?? 7;\n  const now = Date.now();\n  const cutoffMs = days * 24 * 60 * 60 * 1000;\n\n  const recentFailures: FailureRecord[] = [];\n\n  // Scan health.json for failures\n  const healthPath = join(harnessDir, 'memory', 'health.json');\n  if (existsSync(healthPath)) {\n    try {\n      const health = JSON.parse(readFileSync(healthPath, 'utf-8'));\n      if (health.lastError) {\n        const mode = classifyFailure(health.lastError);\n        recentFailures.push({\n          mode,\n          timestamp: health.lastFailure || new Date().toISOString(),\n          message: health.lastError,\n          recovered: health.consecutiveFailures === 0,\n        });\n      }\n    } catch {\n      // Malformed health.json\n    }\n  }\n\n  // Scan sessions for error indicators\n  const sessionsDir = join(harnessDir, 'memory', 'sessions');\n  if (existsSync(sessionsDir)) {\n    const files = readdirSync(sessionsDir)\n      .filter((f) => f.endsWith('.md') && !f.startsWith('.'))\n      .sort()\n      .reverse();\n\n    for (const file of files) {\n      const dateMatch = file.match(/^(\\d{4}-\\d{2}-\\d{2})/);\n      if (dateMatch) {\n        const fileDate = new Date(dateMatch[1]).getTime();\n        if (now - fileDate > cutoffMs) break;\n      }\n\n      try {\n        const content = readFileSync(join(sessionsDir, file), 'utf-8');\n        // Look for error patterns in session content\n        const errorLines = content.split('\\n').filter((l) =>\n          l.toLowerCase().includes('error') ||\n          l.toLowerCase().includes('failed') ||\n          l.toLowerCase().includes('timeout'),\n        );\n\n        for (const line of errorLines.slice(0, 3)) {\n          const mode = classifyFailure(line);\n          if (mode !== 'unknown') {\n            recentFailures.push({\n              mode,\n              timestamp: dateMatch?.[1] ?? 'unknown',\n              sessionId: file.replace('.md', ''),\n              message: line.trim().slice(0, 200),\n              recovered: true,\n            });\n          }\n        }\n      } catch {\n        // Skip unreadable sessions\n      }\n    }\n  }\n\n  // Calculate frequency\n  const modeFrequency: Record<string, number> = {};\n  for (const f of recentFailures) {\n    modeFrequency[f.mode] = (modeFrequency[f.mode] ?? 0) + 1;\n  }\n\n  // Find most common mode\n  let mostCommonMode: FailureMode | null = null;\n  let maxFreq = 0;\n  for (const [mode, count] of Object.entries(modeFrequency)) {\n    if (count > maxFreq) {\n      maxFreq = count;\n      mostCommonMode = mode as FailureMode;\n    }\n  }\n\n  // Suggest recovery\n  const suggestedRecovery = mostCommonMode\n    ? getRecoveryStrategies(mostCommonMode)\n    : [];\n\n  // Determine health implication\n  let healthImplication: 'healthy' | 'degraded' | 'unhealthy' = 'healthy';\n  if (recentFailures.length > 5) {\n    healthImplication = 'unhealthy';\n  } else if (recentFailures.length > 0) {\n    healthImplication = 'degraded';\n  }\n\n  return {\n    recentFailures: recentFailures.slice(0, 20),\n    modeFrequency,\n    mostCommonMode,\n    suggestedRecovery,\n    healthImplication,\n  };\n}\n\n// --- Verification Gates ---\n\nexport type GateStatus = 'pass' | 'fail' | 'warn' | 'skip';\n\nexport interface GateCheck {\n  name: string;\n  description: string;\n  status: GateStatus;\n  message: string;\n  details?: Record<string, unknown>;\n}\n\nexport interface VerificationGateResult {\n  gateName: string;\n  passed: boolean;\n  checks: GateCheck[];\n  summary: string;\n}\n\nexport type GateDefinition = {\n  name: string;\n  description: string;\n  check: (harnessDir: string, config?: HarnessConfig) => GateCheck[];\n};\n\n/**\n * Built-in verification gates for the harness.\n * Each gate is a set of checks that must pass at a specific stage.\n */\nexport const BUILTIN_GATES: GateDefinition[] = [\n  {\n    name: 'pre-boot',\n    description: 'Checks before agent boot: config valid, CORE.md exists, API key available',\n    check: (harnessDir: string) => {\n      const checks: GateCheck[] = [];\n\n      // CORE.md exists\n      checks.push(existsSync(join(harnessDir, 'CORE.md'))\n        ? { name: 'core-md', description: 'CORE.md exists', status: 'pass', message: 'CORE.md present' }\n        : { name: 'core-md', description: 'CORE.md exists', status: 'fail', message: 'Missing CORE.md — required for agent identity' });\n\n      // Config valid\n      try {\n        loadConfig(harnessDir);\n        checks.push({ name: 'config-valid', description: 'config.yaml valid', status: 'pass', message: 'Config parsed successfully' });\n      } catch (err) {\n        checks.push({ name: 'config-valid', description: 'config.yaml valid', status: 'fail', message: `Config error: ${err instanceof Error ? err.message : String(err)}` });\n      }\n\n      // API key available\n      const hasKey = !!(process.env.OPENROUTER_API_KEY || process.env.OPENAI_API_KEY || process.env.ANTHROPIC_API_KEY);\n      checks.push(hasKey\n        ? { name: 'api-key', description: 'API key available', status: 'pass', message: 'API key found in environment' }\n        : { name: 'api-key', description: 'API key available', status: 'warn', message: 'No API key in environment — will need --api-key flag' });\n\n      // Memory directory\n      const memDir = join(harnessDir, 'memory');\n      checks.push(existsSync(memDir)\n        ? { name: 'memory-dir', description: 'Memory directory exists', status: 'pass', message: 'memory/ directory present' }\n        : { name: 'memory-dir', description: 'Memory directory exists', status: 'warn', message: 'memory/ directory missing — will be created on first run' });\n\n      return checks;\n    },\n  },\n  {\n    name: 'pre-run',\n    description: 'Checks before each LLM call: budget, rate limits, context budget',\n    check: (harnessDir: string) => {\n      const checks: GateCheck[] = [];\n\n      let config: HarnessConfig;\n      try {\n        config = loadConfig(harnessDir);\n      } catch {\n        checks.push({ name: 'config-load', description: 'Config loadable', status: 'fail', message: 'Cannot load config' });\n        return checks;\n      }\n\n      // Budget check\n      try {\n        const budgetStatus = checkBudget(harnessDir, config.budget);\n        const exceeded = (budgetStatus.daily_remaining_usd !== null && budgetStatus.daily_remaining_usd <= 0) ||\n          (budgetStatus.monthly_remaining_usd !== null && budgetStatus.monthly_remaining_usd <= 0);\n        if (exceeded) {\n          checks.push({ name: 'budget', description: 'Budget not exceeded', status: 'fail', message: 'Budget limit exceeded', details: { ...budgetStatus } });\n        } else {\n          checks.push({ name: 'budget', description: 'Budget not exceeded', status: 'pass', message: 'Within budget' });\n        }\n      } catch (err) {\n        checks.push({ name: 'budget', description: 'Budget not exceeded', status: 'skip', message: `Budget check unavailable: ${err instanceof Error ? err.message : String(err)}` });\n      }\n\n      // Rate limit check\n      try {\n        const limits = buildRateLimits(config);\n        if (limits.length === 0) {\n          checks.push({ name: 'rate-limit', description: 'Rate limit not hit', status: 'pass', message: 'No rate limits configured' });\n        } else {\n          let blocked = false;\n          for (const limit of limits) {\n            const rateCheck = checkRateLimit(harnessDir, limit);\n            if (!rateCheck.allowed) {\n              const windowLabel = limit.window_ms <= 60_000 ? 'minute' : limit.window_ms <= 3_600_000 ? 'hour' : 'day';\n              checks.push({ name: 'rate-limit', description: 'Rate limit not hit', status: 'fail', message: `Rate limited (${windowLabel}): ${rateCheck.current}/${rateCheck.max}. Retry after ${Math.ceil(rateCheck.retry_after_ms / 1000)}s` });\n              blocked = true;\n              break;\n            }\n          }\n          if (!blocked) {\n            checks.push({ name: 'rate-limit', description: 'Rate limit not hit', status: 'pass', message: 'Within rate limits' });\n          }\n        }\n      } catch (err) {\n        checks.push({ name: 'rate-limit', description: 'Rate limit not hit', status: 'skip', message: `Rate limit check unavailable: ${err instanceof Error ? err.message : String(err)}` });\n      }\n\n      // Health check\n      const healthPath = join(harnessDir, 'memory', 'health.json');\n      if (existsSync(healthPath)) {\n        try {\n          const health = JSON.parse(readFileSync(healthPath, 'utf-8'));\n          if (health.consecutiveFailures >= 3) {\n            checks.push({ name: 'health', description: 'Agent healthy', status: 'warn', message: `${health.consecutiveFailures} consecutive failures detected` });\n          } else {\n            checks.push({ name: 'health', description: 'Agent healthy', status: 'pass', message: 'No recent failure pattern' });\n          }\n        } catch {\n          checks.push({ name: 'health', description: 'Agent healthy', status: 'skip', message: 'Health data unavailable' });\n        }\n      }\n\n      return checks;\n    },\n  },\n  {\n    name: 'post-session',\n    description: 'Checks after a session: session recorded, no parse errors, primitives intact',\n    check: (harnessDir: string) => {\n      const checks: GateCheck[] = [];\n\n      // Sessions directory exists and has files\n      const sessionsDir = join(harnessDir, 'memory', 'sessions');\n      if (existsSync(sessionsDir)) {\n        const files = readdirSync(sessionsDir).filter((f) => f.endsWith('.md') && !f.startsWith('.'));\n        checks.push({\n          name: 'sessions-recorded',\n          description: 'Sessions being recorded',\n          status: files.length > 0 ? 'pass' : 'warn',\n          message: `${files.length} session file(s) in memory`,\n        });\n      } else {\n        checks.push({ name: 'sessions-recorded', description: 'Sessions being recorded', status: 'warn', message: 'No sessions directory' });\n      }\n\n      // Check for parse errors in primitives\n      const dirs = getPrimitiveDirs();\n      let totalParseErrors = 0;\n      for (const dir of dirs) {\n        const fullPath = join(harnessDir, dir);\n        if (!existsSync(fullPath)) continue;\n        const { errors } = loadDirectoryWithErrors(fullPath);\n        totalParseErrors += errors.length;\n      }\n\n      checks.push(totalParseErrors === 0\n        ? { name: 'parse-errors', description: 'No primitive parse errors', status: 'pass', message: 'All primitives parse cleanly' }\n        : { name: 'parse-errors', description: 'No primitive parse errors', status: 'warn', message: `${totalParseErrors} parse error(s) in primitives` });\n\n      return checks;\n    },\n  },\n  {\n    name: 'pre-deploy',\n    description: 'Checks before deployment: validator passes, no dead primitives, no contradictions',\n    check: (harnessDir: string, config?: HarnessConfig) => {\n      const checks: GateCheck[] = [];\n\n      // Run validator\n      try {\n        const validation = validateHarness(harnessDir);\n        if (validation.errors.length > 0) {\n          checks.push({ name: 'validator', description: 'Validator passes', status: 'fail', message: `${validation.errors.length} error(s)`, details: { errors: validation.errors } });\n        } else if (validation.warnings.length > 0) {\n          checks.push({ name: 'validator', description: 'Validator passes', status: 'warn', message: `${validation.warnings.length} warning(s)` });\n        } else {\n          checks.push({ name: 'validator', description: 'Validator passes', status: 'pass', message: 'Validation clean' });\n        }\n      } catch (err) {\n        checks.push({ name: 'validator', description: 'Validator passes', status: 'fail', message: `Validator error: ${err instanceof Error ? err.message : String(err)}` });\n      }\n\n      // Check for dead primitives\n      const deadResult = detectDeadPrimitives(harnessDir, config);\n      checks.push(deadResult.dead.length === 0\n        ? { name: 'dead-primitives', description: 'No dead primitives', status: 'pass', message: 'All primitives referenced or recently modified' }\n        : { name: 'dead-primitives', description: 'No dead primitives', status: 'warn', message: `${deadResult.dead.length} dead primitive(s) found`, details: { dead: deadResult.dead.map((d) => d.id) } });\n\n      // Check for contradictions\n      const contradictionResult = detectContradictions(harnessDir);\n      checks.push(contradictionResult.contradictions.length === 0\n        ? { name: 'contradictions', description: 'No contradictions', status: 'pass', message: 'No conflicting rules/instincts' }\n        : { name: 'contradictions', description: 'No contradictions', status: 'warn', message: `${contradictionResult.contradictions.length} potential contradiction(s)` });\n\n      return checks;\n    },\n  },\n];\n\n/**\n * Run a verification gate by name.\n * Returns all check results and an overall pass/fail status.\n */\nexport function runGate(\n  gateName: string,\n  harnessDir: string,\n  config?: HarnessConfig,\n): VerificationGateResult {\n  const gate = BUILTIN_GATES.find((g) => g.name === gateName);\n  if (!gate) {\n    return {\n      gateName,\n      passed: false,\n      checks: [{ name: 'gate-not-found', description: 'Gate exists', status: 'fail', message: `Unknown gate: ${gateName}` }],\n      summary: `Gate \"${gateName}\" not found. Available: ${BUILTIN_GATES.map((g) => g.name).join(', ')}`,\n    };\n  }\n\n  const checks = gate.check(harnessDir, config);\n  const hasFails = checks.some((c) => c.status === 'fail');\n  const hasWarns = checks.some((c) => c.status === 'warn');\n\n  const passed = !hasFails;\n  const passCount = checks.filter((c) => c.status === 'pass').length;\n  const failCount = checks.filter((c) => c.status === 'fail').length;\n  const warnCount = checks.filter((c) => c.status === 'warn').length;\n\n  let summary = `${gate.name}: ${passCount} passed`;\n  if (failCount > 0) summary += `, ${failCount} failed`;\n  if (warnCount > 0) summary += `, ${warnCount} warnings`;\n\n  return { gateName, passed, checks, summary };\n}\n\n/**\n * Run all built-in verification gates.\n */\nexport function runAllGates(\n  harnessDir: string,\n  config?: HarnessConfig,\n): VerificationGateResult[] {\n  return BUILTIN_GATES.map((gate) => runGate(gate.name, harnessDir, config));\n}\n\n/**\n * List available gate names and descriptions.\n */\nexport function listGates(): Array<{ name: string; description: string }> {\n  return BUILTIN_GATES.map((g) => ({ name: g.name, description: g.description 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package/dist/project-discovery-C4UMD7JI.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/runtime/project-discovery.ts"],"sourcesContent":["import { existsSync, readFileSync, readdirSync } from 'fs';\nimport { join, basename } from 'path';\n\n// --- Types ---\n\n/** A detected project characteristic */\nexport interface ProjectSignal {\n  /** What was detected (e.g. \"TypeScript\", \"React\", \"Docker\") */\n  name: string;\n  /** Category of signal */\n  category: 'language' | 'framework' | 'tool' | 'runtime' | 'database' | 'cloud' | 'testing';\n  /** Source file that triggered the detection */\n  source: string;\n  /** Additional details */\n  details?: string;\n}\n\n/** Suggested rule, skill, or MCP server */\nexport interface ProjectSuggestion {\n  /** What type of thing to add */\n  type: 'rule' | 'skill' | 'mcp-server';\n  /** Human-readable suggestion */\n  message: string;\n  /** File to create (for rules/skills) or server query (for MCP) */\n  target: string;\n  /** Triggered by these signals */\n  signals: string[];\n}\n\n/** Full project discovery result */\nexport interface ProjectDiscoveryResult {\n  /** Detected project signals */\n  signals: ProjectSignal[];\n  /** Files that were examined */\n  filesExamined: string[];\n  /** Suggestions based on signals */\n  suggestions: ProjectSuggestion[];\n}\n\n// --- Detection Functions ---\n\ninterface DetectionRule {\n  file: string;\n  detect: (content: string, dir: string) => ProjectSignal[];\n}\n\nfunction detectPackageJson(content: string): ProjectSignal[] {\n  const signals: ProjectSignal[] = [];\n\n  let pkg: Record<string, unknown>;\n  try {\n    pkg = JSON.parse(content);\n  } catch {\n    return signals;\n  }\n\n  const allDeps = {\n    ...(pkg.dependencies as Record<string, string> | undefined),\n    ...(pkg.devDependencies as Record<string, string> | undefined),\n  };\n\n  // Language\n  if (allDeps['typescript'] || existsSync('tsconfig.json')) {\n    signals.push({ name: 'TypeScript', category: 'language', source: 'package.json' });\n  }\n\n  // Frameworks\n  const frameworks: Record<string, { name: string; category: ProjectSignal['category'] }> = {\n    'react': { name: 'React', category: 'framework' },\n    'next': { name: 'Next.js', category: 'framework' },\n    'vue': { name: 'Vue', category: 'framework' },\n    'nuxt': { name: 'Nuxt', category: 'framework' },\n    'svelte': { name: 'Svelte', category: 'framework' },\n    '@angular/core': { name: 'Angular', category: 'framework' },\n    'express': { name: 'Express', category: 'framework' },\n    'fastify': { name: 'Fastify', category: 'framework' },\n    'hono': { name: 'Hono', category: 'framework' },\n    'astro': { name: 'Astro', category: 'framework' },\n    'remix': { name: 'Remix', category: 'framework' },\n    '@remix-run/node': { name: 'Remix', category: 'framework' },\n    'electron': { name: 'Electron', category: 'framework' },\n  };\n\n  for (const [dep, info] of Object.entries(frameworks)) {\n    if (allDeps[dep]) {\n      signals.push({ name: info.name, category: info.category, source: 'package.json', details: `v${allDeps[dep]}` });\n    }\n  }\n\n  // Testing\n  const testLibs: Record<string, string> = {\n    'vitest': 'Vitest',\n    'jest': 'Jest',\n    'mocha': 'Mocha',\n    '@playwright/test': 'Playwright',\n    'cypress': 'Cypress',\n  };\n\n  for (const [dep, name] of Object.entries(testLibs)) {\n    if (allDeps[dep]) {\n      signals.push({ name, category: 'testing', source: 'package.json' });\n    }\n  }\n\n  // Databases\n  const dbLibs: Record<string, string> = {\n    'prisma': 'Prisma',\n    '@prisma/client': 'Prisma',\n    'drizzle-orm': 'Drizzle',\n    'mongoose': 'MongoDB (Mongoose)',\n    'pg': 'PostgreSQL',\n    'mysql2': 'MySQL',\n    'better-sqlite3': 'SQLite',\n    'redis': 'Redis',\n    'ioredis': 'Redis',\n  };\n\n  for (const [dep, name] of Object.entries(dbLibs)) {\n    if (allDeps[dep]) {\n      signals.push({ name, category: 'database', source: 'package.json' });\n    }\n  }\n\n  // Tools\n  const tools: Record<string, string> = {\n    'eslint': 'ESLint',\n    'prettier': 'Prettier',\n    'tailwindcss': 'Tailwind CSS',\n    'storybook': 'Storybook',\n    '@storybook/react': 'Storybook',\n    'docker-compose': 'Docker Compose',\n  };\n\n  for (const [dep, name] of Object.entries(tools)) {\n    if (allDeps[dep]) {\n      signals.push({ name, category: 'tool', source: 'package.json' });\n    }\n  }\n\n  return signals;\n}\n\nfunction detectFromFiles(dir: string): ProjectSignal[] {\n  const signals: ProjectSignal[] = [];\n  const entries = new Set<string>();\n\n  try {\n    for (const e of readdirSync(dir)) {\n      entries.add(e);\n    }\n  } catch {\n    return signals;\n  }\n\n  // Config files\n  if (entries.has('Dockerfile') || entries.has('docker-compose.yml') || entries.has('docker-compose.yaml')) {\n    signals.push({ name: 'Docker', category: 'runtime', source: 'Dockerfile' });\n  }\n\n  if (entries.has('.github')) {\n    signals.push({ name: 'GitHub Actions', category: 'tool', source: '.github/' });\n  }\n\n  if (entries.has('Makefile')) {\n    signals.push({ name: 'Make', category: 'tool', source: 'Makefile' });\n  }\n\n  if (entries.has('pyproject.toml') || entries.has('setup.py') || entries.has('requirements.txt')) {\n    signals.push({ name: 'Python', category: 'language', source: 'pyproject.toml' });\n  }\n\n  if (entries.has('Cargo.toml')) {\n    signals.push({ name: 'Rust', category: 'language', source: 'Cargo.toml' });\n  }\n\n  if (entries.has('go.mod')) {\n    signals.push({ name: 'Go', category: 'language', source: 'go.mod' });\n  }\n\n  if (entries.has('Gemfile')) {\n    signals.push({ name: 'Ruby', category: 'language', source: 'Gemfile' });\n  }\n\n  if (entries.has('.terraform') || entries.has('main.tf')) {\n    signals.push({ name: 'Terraform', category: 'cloud', source: 'main.tf' });\n  }\n\n  if (entries.has('serverless.yml') || entries.has('serverless.yaml')) {\n    signals.push({ name: 'Serverless Framework', category: 'cloud', source: 'serverless.yml' });\n  }\n\n  if (entries.has('vercel.json')) {\n    signals.push({ name: 'Vercel', category: 'cloud', source: 'vercel.json' });\n  }\n\n  if (entries.has('netlify.toml')) {\n    signals.push({ name: 'Netlify', category: 'cloud', source: 'netlify.toml' });\n  }\n\n  if (entries.has('wrangler.toml') || entries.has('wrangler.jsonc')) {\n    signals.push({ name: 'Cloudflare Workers', category: 'cloud', source: 'wrangler.toml' });\n  }\n\n  if (entries.has('.prisma') || entries.has('prisma')) {\n    signals.push({ name: 'Prisma', category: 'database', source: 'prisma/' });\n  }\n\n  if (entries.has('supabase')) {\n    signals.push({ name: 'Supabase', category: 'database', source: 'supabase/' });\n  }\n\n  return signals;\n}\n\n// --- Suggestion Engine ---\n\ninterface SuggestionRule {\n  signals: string[];\n  type: ProjectSuggestion['type'];\n  message: string;\n  target: string;\n}\n\nconst SUGGESTION_RULES: SuggestionRule[] = [\n  {\n    signals: ['TypeScript'],\n    type: 'rule',\n    message: 'Add a TypeScript coding standards rule',\n    target: 'rules/typescript-standards.md',\n  },\n  {\n    signals: ['React'],\n    type: 'rule',\n    message: 'Add React component patterns rule',\n    target: 'rules/react-patterns.md',\n  },\n  {\n    signals: ['Next.js'],\n    type: 'skill',\n    message: 'Add Next.js development skill',\n    target: 'skills/nextjs.md',\n  },\n  {\n    signals: ['Docker'],\n    type: 'rule',\n    message: 'Add Docker/containerization rule',\n    target: 'rules/docker.md',\n  },\n  {\n    signals: ['GitHub Actions'],\n    type: 'skill',\n    message: 'Add CI/CD pipeline skill',\n    target: 'skills/ci-cd.md',\n  },\n  {\n    signals: ['PostgreSQL', 'Prisma'],\n    type: 'mcp-server',\n    message: 'Install PostgreSQL MCP server for database access',\n    target: 'postgres',\n  },\n  {\n    signals: ['Supabase'],\n    type: 'mcp-server',\n    message: 'Install Supabase MCP server',\n    target: 'supabase',\n  },\n  {\n    signals: ['ESLint'],\n    type: 'rule',\n    message: 'Add linting standards rule',\n    target: 'rules/linting.md',\n  },\n  {\n    signals: ['Vitest', 'Jest'],\n    type: 'rule',\n    message: 'Add testing standards rule',\n    target: 'rules/testing.md',\n  },\n  {\n    signals: ['Tailwind CSS'],\n    type: 'rule',\n    message: 'Add styling conventions rule',\n    target: 'rules/styling.md',\n  },\n];\n\nfunction generateSuggestions(signals: ProjectSignal[]): ProjectSuggestion[] {\n  const signalNames = new Set(signals.map((s) => s.name));\n  const suggestions: ProjectSuggestion[] = [];\n\n  for (const rule of SUGGESTION_RULES) {\n    // Check if ANY of the required signals are present\n    const matchedSignals = rule.signals.filter((s) => signalNames.has(s));\n    if (matchedSignals.length > 0) {\n      suggestions.push({\n        type: rule.type,\n        message: rule.message,\n        target: rule.target,\n        signals: matchedSignals,\n      });\n    }\n  }\n\n  return suggestions;\n}\n\n// --- Main Discovery ---\n\n/** Options for project discovery */\nexport interface ProjectDiscoveryOptions {\n  /** Project directory to scan */\n  dir?: string;\n}\n\n/**\n * Scan a project directory to detect its technology stack and suggest\n * rules, skills, and MCP servers.\n */\nexport function discoverProjectContext(options?: ProjectDiscoveryOptions): ProjectDiscoveryResult {\n  const dir = options?.dir ?? process.cwd();\n  const signals: ProjectSignal[] = [];\n  const filesExamined: string[] = [];\n\n  // Scan package.json\n  const packageJsonPath = join(dir, 'package.json');\n  if (existsSync(packageJsonPath)) {\n    filesExamined.push(packageJsonPath);\n    const content = readFileSync(packageJsonPath, 'utf-8');\n    signals.push(...detectPackageJson(content));\n  }\n\n  // Scan directory for files/folders\n  filesExamined.push(dir);\n  signals.push(...detectFromFiles(dir));\n\n  // Deduplicate signals by name\n  const seen = new Set<string>();\n  const 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package/dist/provider-LQHQX7Z7.js

@@ -1,26 +0,0 @@
-import {
-  generate,
-  generateWithMessages,
-  getFastModel,
-  getModel,
-  getProvider,
-  getSummaryModel,
-  resetProvider,
-  streamGenerate,
-  streamGenerateWithDetails,
-  streamWithMessages
-} from "./chunk-FD55B3IO.js";
-import "./chunk-DGUM43GV.js";
-export {
-  generate,
-  generateWithMessages,
-  getFastModel,
-  getModel,
-  getProvider,
-  getSummaryModel,
-  resetProvider,
-  streamGenerate,
-  streamGenerateWithDetails,
-  streamWithMessages
-};
-//# sourceMappingURL=provider-LQHQX7Z7.js.map

package/dist/search-V3W5JMJG.js.map

@@ -1 +0,0 @@
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package/dist/semantic-search-2DTOO5UX.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/runtime/semantic-search.ts"],"sourcesContent":["import { existsSync, readFileSync, writeFileSync, mkdirSync, statSync } from 'fs';\nimport { join } from 'path';\nimport { loadAllPrimitives, estimateTokens, getAtLevel } from '../primitives/loader.js';\nimport type { HarnessDocument, HarnessConfig } from '../core/types.js';\nimport { withFileLockSync } from './file-lock.js';\n\n// ─── Types ───────────────────────────────────────────────────────────────────\n\n/** A stored embedding for a single primitive document. */\nexport interface EmbeddingRecord {\n  /** Document ID from frontmatter */\n  id: string;\n  /** Path to the source markdown file */\n  path: string;\n  /** Primitive directory (rules, skills, etc.) */\n  directory: string;\n  /** Text that was embedded (L0 + L1 + tags) */\n  embeddedText: string;\n  /** The embedding vector */\n  vector: number[];\n  /** File modification time (to detect stale embeddings) */\n  mtime: string;\n  /** When the embedding was generated */\n  createdAt: string;\n}\n\n/** Embedding store format — persisted as JSON. */\nexport interface EmbeddingStore {\n  /** Model ID used for embeddings (invalidate cache if changed) */\n  modelId: string;\n  /** Embedding vector dimension */\n  dimensions: number;\n  /** Map of document ID → embedding record */\n  records: Record<string, EmbeddingRecord>;\n  /** Last full index time */\n  lastIndexedAt: string;\n}\n\n/** Result of a semantic search query. */\nexport interface SemanticSearchResult {\n  doc: HarnessDocument;\n  directory: string;\n  /** Cosine similarity score (0-1, higher is more relevant) */\n  score: number;\n  /** The embedded text that matched */\n  embeddedText: string;\n}\n\n/** Function signature for embedding text → vector. */\nexport type EmbedFunction = (texts: string[]) => Promise<number[][]>;\n\n/** Configuration for the semantic search module. */\nexport interface SemanticSearchConfig {\n  /** Function to embed text (wraps Vercel AI SDK embed/embedMany) */\n  embed: EmbedFunction;\n  /** Embedding model identifier (for cache invalidation) */\n  modelId: string;\n  /** Maximum results to return (default: 10) */\n  maxResults?: number;\n  /** Minimum similarity threshold (default: 0.3) */\n  minScore?: number;\n}\n\n// ─── Constants ───────────────────────────────────────────────────────────────\n\nconst STORE_FILE = 'embeddings.json';\nconst STORE_DIR = 'memory';\n\n// ─── Store Management ────────────────────────────────────────────────────────\n\n/** Load the embedding store from disk. Returns null if not found or invalid. */\nexport function loadEmbeddingStore(harnessDir: string): EmbeddingStore | null {\n  const storePath = join(harnessDir, STORE_DIR, STORE_FILE);\n  if (!existsSync(storePath)) return null;\n\n  try {\n    const raw = readFileSync(storePath, 'utf-8');\n    return JSON.parse(raw) as EmbeddingStore;\n  } catch {\n    return null;\n  }\n}\n\n/** Save the embedding store to disk. */\nexport function saveEmbeddingStore(harnessDir: string, store: EmbeddingStore): void {\n  const storeDir = join(harnessDir, STORE_DIR);\n  if (!existsSync(storeDir)) {\n    mkdirSync(storeDir, { recursive: true });\n  }\n\n  const storePath = join(storeDir, STORE_FILE);\n  withFileLockSync(harnessDir, storePath, () => {\n    writeFileSync(storePath, JSON.stringify(store), 'utf-8');\n  });\n}\n\n// ─── Text Extraction ─────────────────────────────────────────────────────────\n\n/**\n * Extract embeddable text from a document.\n * Combines: tags, L0 summary, L1 summary, and first 500 chars of body.\n * This gives a compact representation for embedding.\n */\nexport function extractEmbeddableText(doc: HarnessDocument): string {\n  const parts: string[] = [];\n\n  // Tags provide topical context\n  if (doc.frontmatter.tags.length > 0) {\n    parts.push(`Tags: ${doc.frontmatter.tags.join(', ')}`);\n  }\n\n  // L0 — one-liner\n  if (doc.l0) {\n    parts.push(doc.l0);\n  }\n\n  // L1 — paragraph summary\n  if (doc.l1) {\n    parts.push(doc.l1);\n  }\n\n  // Truncated body for additional context\n  const bodyPreview = doc.body.slice(0, 500).trim();\n  if (bodyPreview) {\n    parts.push(bodyPreview);\n  }\n\n  return parts.join('\\n').trim();\n}\n\n// ─── Indexing ────────────────────────────────────────────────────────────────\n\n/**\n * Detect which primitives need re-embedding.\n * A primitive is stale if:\n * - It doesn't exist in the store\n * - Its file mtime has changed since last embedding\n * - The embedding model has changed\n */\nexport function detectStalePrimitives(\n  harnessDir: string,\n  store: EmbeddingStore | null,\n  modelId: string,\n  config?: HarnessConfig,\n): Array<{ doc: HarnessDocument; directory: string }> {\n  const stale: Array<{ doc: HarnessDocument; directory: string }> = [];\n  const allPrimitives = loadAllPrimitives(harnessDir, config?.extensions?.directories);\n\n  // If model changed, everything is stale\n  const modelChanged = store !== null && store.modelId !== modelId;\n\n  for (const [directory, docs] of allPrimitives) {\n    for (const doc of docs) {\n      if (doc.frontmatter.status !== 'active') continue;\n\n      const id = doc.frontmatter.id;\n\n      if (modelChanged || !store) {\n        stale.push({ doc, directory });\n        continue;\n      }\n\n      const existing = store.records[id];\n      if (!existing) {\n        stale.push({ doc, directory });\n        continue;\n      }\n\n      // Check if file changed\n      try {\n        const stat = statSync(doc.path);\n        if (stat.mtime.toISOString() !== existing.mtime) {\n          stale.push({ doc, directory });\n        }\n      } catch {\n        stale.push({ doc, directory });\n      }\n    }\n  }\n\n  return stale;\n}\n\n/**\n * Index (or re-index) all primitives that need embeddings.\n * Incrementally updates the store — only re-embeds stale documents.\n *\n * @param harnessDir - Harness directory path\n * @param config - Semantic search configuration with embed function\n * @param harnessConfig - Optional harness config for extension directories\n * @returns Updated embedding store\n */\nexport async function indexPrimitives(\n  harnessDir: string,\n  searchConfig: SemanticSearchConfig,\n  harnessConfig?: HarnessConfig,\n): Promise<EmbeddingStore> {\n  let store = loadEmbeddingStore(harnessDir);\n\n  const stale = detectStalePrimitives(harnessDir, store, searchConfig.modelId, harnessConfig);\n\n  if (stale.length === 0 && store) {\n    return store;\n  }\n\n  // Initialize store if needed\n  if (!store || store.modelId !== searchConfig.modelId) {\n    store = {\n      modelId: searchConfig.modelId,\n      dimensions: 0,\n      records: {},\n      lastIndexedAt: new Date().toISOString(),\n    };\n  }\n\n  // Extract texts to embed\n  const textsToEmbed: string[] = [];\n  const docInfos: Array<{ doc: HarnessDocument; directory: string }> = [];\n\n  for (const item of stale) {\n    const text = extractEmbeddableText(item.doc);\n    if (!text) continue;\n    textsToEmbed.push(text);\n    docInfos.push(item);\n  }\n\n  if (textsToEmbed.length === 0) {\n    return store;\n  }\n\n  // Batch embed (chunked to avoid hitting rate limits)\n  const batchSize = 50;\n  for (let i = 0; i < textsToEmbed.length; i += batchSize) {\n    const batch = textsToEmbed.slice(i, i + batchSize);\n    const batchDocs = docInfos.slice(i, i + batchSize);\n\n    const vectors = await searchConfig.embed(batch);\n\n    for (let j = 0; j < vectors.length; j++) {\n      const doc = batchDocs[j].doc;\n      const vector = vectors[j];\n\n      if (store.dimensions === 0 && vector.length > 0) {\n        store.dimensions = vector.length;\n      }\n\n      let mtime: string;\n      try {\n        const stat = statSync(doc.path);\n        mtime = stat.mtime.toISOString();\n      } catch {\n        mtime = new Date().toISOString();\n      }\n\n      store.records[doc.frontmatter.id] = {\n        id: doc.frontmatter.id,\n        path: doc.path,\n        directory: batchDocs[j].directory,\n        embeddedText: batch[j],\n        vector,\n        mtime,\n        createdAt: new Date().toISOString(),\n      };\n    }\n  }\n\n  store.lastIndexedAt = new Date().toISOString();\n\n  // Clean up deleted docs\n  const allIds = new Set<string>();\n  const allPrimitives = loadAllPrimitives(harnessDir, harnessConfig?.extensions?.directories);\n  for (const [, docs] of allPrimitives) {\n    for (const doc of docs) {\n      allIds.add(doc.frontmatter.id);\n    }\n  }\n\n  for (const id of Object.keys(store.records)) {\n    if (!allIds.has(id)) {\n      delete store.records[id];\n    }\n  }\n\n  saveEmbeddingStore(harnessDir, store);\n  return store;\n}\n\n// ─── Search ──────────────────────────────────────────────────────────────────\n\n/**\n * Compute cosine similarity between two vectors.\n * Returns a value between -1 and 1 (1 = identical, 0 = orthogonal).\n */\nexport function cosineSimilarity(a: number[], b: number[]): number {\n  if (a.length !== b.length || a.length === 0) return 0;\n\n  let dotProduct = 0;\n  let normA = 0;\n  let normB = 0;\n\n  for (let i = 0; i < a.length; i++) {\n    dotProduct += a[i] * b[i];\n    normA += a[i] * a[i];\n    normB += b[i] * b[i];\n  }\n\n  const denominator = Math.sqrt(normA) * Math.sqrt(normB);\n  if (denominator === 0) return 0;\n\n  return dotProduct / denominator;\n}\n\n/**\n * Perform semantic search over indexed primitives.\n *\n * @param harnessDir - Harness directory path\n * @param query - Natural language query\n * @param searchConfig - Search configuration with embed function\n * @param harnessConfig - Optional harness config\n * @returns Ranked search results by cosine similarity\n */\nexport async function semanticSearch(\n  harnessDir: string,\n  query: string,\n  searchConfig: SemanticSearchConfig,\n  harnessConfig?: HarnessConfig,\n): Promise<SemanticSearchResult[]> {\n  const store = loadEmbeddingStore(harnessDir);\n  if (!store || Object.keys(store.records).length === 0) {\n    return [];\n  }\n\n  const maxResults = searchConfig.maxResults ?? 10;\n  const minScore = searchConfig.minScore ?? 0.3;\n\n  // Embed the query\n  const [queryVector] = await searchConfig.embed([query]);\n  if (!queryVector || queryVector.length === 0) {\n    return [];\n  }\n\n  // Score all documents\n  const scored: Array<{ record: EmbeddingRecord; score: number }> = [];\n\n  for (const record of Object.values(store.records)) {\n    const score = cosineSimilarity(queryVector, record.vector);\n    if (score >= minScore) {\n      scored.push({ record, score });\n    }\n  }\n\n  // Sort by score descending\n  scored.sort((a, b) => b.score - a.score);\n\n  // Load the actual documents for results\n  const allPrimitives = loadAllPrimitives(harnessDir, harnessConfig?.extensions?.directories);\n  const docMap = new Map<string, { doc: HarnessDocument; directory: string }>();\n  for (const [directory, docs] of allPrimitives) {\n    for (const doc of docs) {\n      docMap.set(doc.frontmatter.id, { doc, directory });\n    }\n  }\n\n  const results: SemanticSearchResult[] = [];\n\n  for (const { record, score } of scored.slice(0, maxResults)) {\n    const entry = docMap.get(record.id);\n    if (!entry) continue;\n\n    results.push({\n      doc: entry.doc,\n      directory: entry.directory,\n      score,\n      embeddedText: record.embeddedText,\n    });\n  }\n\n  return results;\n}\n\n/**\n * Get embedding stats for the harness.\n */\nexport function getEmbeddingStats(harnessDir: string): {\n  indexed: number;\n  modelId: string | null;\n  dimensions: number;\n  lastIndexedAt: string | null;\n  storeSize: number;\n} {\n  const store = loadEmbeddingStore(harnessDir);\n  if (!store) {\n    return {\n      indexed: 0,\n      modelId: null,\n      dimensions: 0,\n      lastIndexedAt: null,\n      storeSize: 0,\n    };\n  }\n\n  const storePath = join(harnessDir, STORE_DIR, STORE_FILE);\n  let storeSize = 0;\n  try {\n    storeSize = statSync(storePath).size;\n  } catch {\n    // Ignore\n  }\n\n  return {\n    indexed: Object.keys(store.records).length,\n    modelId: store.modelId,\n    dimensions: store.dimensions,\n    lastIndexedAt: store.lastIndexedAt,\n    storeSize,\n  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package/dist/serve-DTQ3HENY.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/runtime/serve.ts"],"sourcesContent":["import { existsSync, readFileSync, writeFileSync, mkdirSync } from 'fs';\nimport { join } from 'path';\nimport { Hono } from 'hono';\nimport { cors } from 'hono/cors';\nimport { serve as honoServe } from '@hono/node-server';\nimport type { Server } from 'http';\nimport { createWebApp } from './web-server.js';\nimport { log } from '../core/logger.js';\nimport { loadConfig } from '../core/config.js';\nimport { Conversation } from './conversation.js';\nimport { withFileLockSync } from './file-lock.js';\nimport type { HarnessConfig } from '../core/types.js';\n\n// ─── Types ───────────────────────────────────────────────────────────────────\n\nexport interface ServeOptions {\n  harnessDir: string;\n  port?: number;\n  apiKey?: string;\n  /** Secret for authenticating incoming webhooks */\n  webhookSecret?: string;\n  /** Enable CORS for all origins (default: true) */\n  corsEnabled?: boolean;\n}\n\nexport interface WebhookRegistration {\n  /** Unique webhook ID */\n  id: string;\n  /** URL to send events to */\n  url: string;\n  /** Events to subscribe to (e.g., ['session_end', 'state_change']) */\n  events: string[];\n  /** Optional secret for signing payloads */\n  secret?: string;\n  /** Whether this webhook is active */\n  active: boolean;\n  /** Created timestamp */\n  createdAt: string;\n}\n\nexport interface WebhookPayload {\n  event: string;\n  timestamp: string;\n  data: unknown;\n  webhookId: string;\n}\n\nexport interface WebhookStore {\n  webhooks: WebhookRegistration[];\n}\n\nexport interface ServeResult {\n  server: Server;\n  port: number;\n  /** Function to fire a webhook event */\n  fireEvent: (event: string, data: unknown) => Promise<void>;\n  /** Function to stop the server */\n  stop: () => void;\n}\n\n// ─── Webhook Store ──────────────────────────────────────────────────────────\n\nconst WEBHOOK_FILE = 'webhooks.json';\n\nfunction loadWebhooks(harnessDir: string): WebhookStore {\n  const filePath = join(harnessDir, 'memory', WEBHOOK_FILE);\n  if (!existsSync(filePath)) return { webhooks: [] };\n\n  try {\n    const raw = readFileSync(filePath, 'utf-8');\n    return JSON.parse(raw) as WebhookStore;\n  } catch {\n    return { webhooks: [] };\n  }\n}\n\nfunction saveWebhooks(harnessDir: string, store: WebhookStore): void {\n  const memDir = join(harnessDir, 'memory');\n  if (!existsSync(memDir)) mkdirSync(memDir, { recursive: true });\n\n  const filePath = join(memDir, WEBHOOK_FILE);\n  withFileLockSync(harnessDir, filePath, () => {\n    writeFileSync(filePath, JSON.stringify(store, null, 2), 'utf-8');\n  });\n}\n\n// ─── Webhook Delivery ───────────────────────────────────────────────────────\n\n/**\n * Fire an event to all subscribed webhooks.\n * Non-blocking — logs failures but never throws.\n */\nasync function fireWebhookEvent(\n  harnessDir: string,\n  event: string,\n  data: unknown,\n): Promise<void> {\n  const store = loadWebhooks(harnessDir);\n  const subscribers = store.webhooks.filter(\n    (w) => w.active && (w.events.includes('*') || w.events.includes(event)),\n  );\n\n  if (subscribers.length === 0) return;\n\n  const payload: Omit<WebhookPayload, 'webhookId'> = {\n    event,\n    timestamp: new Date().toISOString(),\n    data,\n  };\n\n  const deliveries = subscribers.map(async (webhook) => {\n    try {\n      const body = JSON.stringify({ ...payload, webhookId: webhook.id });\n      const headers: Record<string, string> = {\n        'Content-Type': 'application/json',\n        'X-Harness-Event': event,\n        'X-Webhook-ID': webhook.id,\n      };\n\n      // HMAC signing if secret is configured\n      if (webhook.secret) {\n        const crypto = await import('crypto');\n        const hmac = crypto.createHmac('sha256', webhook.secret);\n        hmac.update(body);\n        headers['X-Harness-Signature'] = `sha256=${hmac.digest('hex')}`;\n      }\n\n      const controller = new AbortController();\n      const timer = setTimeout(() => controller.abort(), 10000);\n\n      const response = await fetch(webhook.url, {\n        method: 'POST',\n        headers,\n        body,\n        signal: controller.signal,\n      });\n\n      clearTimeout(timer);\n\n      if (!response.ok) {\n        log.warn(`Webhook ${webhook.id} delivery failed: HTTP ${response.status}`);\n      }\n    } catch (err) {\n      log.warn(`Webhook ${webhook.id} delivery failed: ${err instanceof Error ? err.message : String(err)}`);\n    }\n  });\n\n  await Promise.allSettled(deliveries);\n}\n\n// ─── Server Factory ─────────────────────────────────────────────────────────\n\n/**\n * Create and start the harness API server.\n *\n * Includes:\n * - All dashboard endpoints from web-server.ts\n * - Webhook registration and management API\n * - Prompt execution endpoint (POST /api/run)\n * - Health check endpoint (GET /api/health)\n * - Version information endpoint (GET /api/info)\n *\n * Usage:\n * ```typescript\n * const result = startServe({\n *   harnessDir: './my-harness',\n *   port: 8080,\n *   webhookSecret: 'my-secret',\n * });\n *\n * // Fire events to registered webhooks\n * await result.fireEvent('custom_event', { key: 'value' });\n *\n * // Stop the server\n * result.stop();\n * ```\n */\nexport function startServe(options: ServeOptions): ServeResult {\n  const {\n    harnessDir,\n    port = 8080,\n    apiKey,\n    webhookSecret,\n  } = options;\n\n  // Build the base web app (dashboard + primitives + sessions + chat + SSE)\n  const { app: baseApp, broadcaster } = createWebApp(harnessDir, { apiKey });\n\n  // Create a new Hono app that wraps the base with additional endpoints\n  const app = new Hono();\n  app.use('*', cors());\n\n  // ── Authentication middleware for webhook management ──\n  const requireAuth = (secret: string | undefined) => {\n    return async (c: { req: { header: (name: string) => string | undefined }; json: (body: unknown, status: number) => Response }, next: () => Promise<void>): Promise<Response | void> => {\n      if (!secret) return next();\n      const auth = c.req.header('Authorization');\n      if (!auth || auth !== `Bearer ${secret}`) {\n        return c.json({ error: 'Unauthorized' }, 401);\n      }\n      return next();\n    };\n  };\n\n  // ── Health Check ──\n  app.get('/api/health', (c) => {\n    return c.json({\n      status: 'ok',\n      timestamp: new Date().toISOString(),\n      harnessDir,\n    });\n  });\n\n  // ── Agent Info ──\n  app.get('/api/info', (c) => {\n    try {\n      const config = loadConfig(harnessDir);\n      return c.json({\n        name: config.agent.name,\n        version: config.agent.version,\n        model: config.model.id,\n        provider: config.model.provider,\n      });\n    } catch {\n      return c.json({ error: 'Failed to load config' }, 500);\n    }\n  });\n\n  // ── Run prompt ──\n  app.post('/api/run', async (c) => {\n    const body = await c.req.json<{ prompt?: string; model?: string }>().catch(() => ({} as { prompt?: string; model?: string }));\n    if (!body.prompt || body.prompt.trim().length === 0) {\n      return c.json({ error: 'prompt is required' }, 400);\n    }\n\n    try {\n      const { createHarness } = await import('../core/harness.js');\n      const harness = createHarness({\n        dir: harnessDir,\n        model: body.model,\n        apiKey,\n      });\n\n      await harness.boot();\n      const result = await harness.run(body.prompt);\n      await harness.shutdown();\n\n      // Fire webhook\n      await fireWebhookEvent(harnessDir, 'run_complete', {\n        prompt: body.prompt,\n        text: result.text,\n      });\n\n      return c.json({\n        text: result.text,\n        usage: result.usage,\n        steps: result.steps,\n      });\n    } catch (err) {\n      const message = err instanceof Error ? err.message : String(err);\n      await fireWebhookEvent(harnessDir, 'run_error', {\n        prompt: body.prompt,\n        error: message,\n      });\n      return c.json({ error: message }, 500);\n    }\n  });\n\n  // ── Webhook Registration API ──\n\n  // List registered webhooks\n  app.get('/api/webhooks', requireAuth(webhookSecret) as never, (c) => {\n    const store = loadWebhooks(harnessDir);\n    return c.json(store.webhooks.map((w) => ({\n      id: w.id,\n      url: w.url,\n      events: w.events,\n      active: w.active,\n      createdAt: w.createdAt,\n    })));\n  });\n\n  // Register a new webhook\n  app.post('/api/webhooks', requireAuth(webhookSecret) as never, async (c) => {\n    const body = await c.req.json<{\n      url?: string;\n      events?: string[];\n      secret?: string;\n    }>().catch(() => ({} as { url?: string; events?: string[]; secret?: string }));\n\n    if (!body.url) {\n      return c.json({ error: 'url is required' }, 400);\n    }\n\n    // Validate URL\n    try {\n      new URL(body.url);\n    } catch {\n      return c.json({ error: 'Invalid URL' }, 400);\n    }\n\n    const store = loadWebhooks(harnessDir);\n    const id = `wh_${Date.now().toString(36)}_${Math.random().toString(36).slice(2, 8)}`;\n\n    const webhook: WebhookRegistration = {\n      id,\n      url: body.url,\n      events: body.events ?? 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package/dist/tools-DZ4KETET.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":[],"sourcesContent":[],"mappings":"","names":[]}

package/dist/types-EW7AIB3R.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":[],"sourcesContent":[],"mappings":"","names":[]}

package/dist/types-WGDLSPO6.js

@@ -1,16 +0,0 @@
-import {
-  CONFIG_DEFAULTS,
-  CORE_PRIMITIVE_DIRS,
-  FrontmatterSchema,
-  HarnessConfigSchema,
-  getPrimitiveDirs
-} from "./chunk-KFX54TQM.js";
-import "./chunk-DGUM43GV.js";
-export {
-  CONFIG_DEFAULTS,
-  CORE_PRIMITIVE_DIRS,
-  FrontmatterSchema,
-  HarnessConfigSchema,
-  getPrimitiveDirs
-};
-//# sourceMappingURL=types-WGDLSPO6.js.map

package/dist/types-WGDLSPO6.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":[],"sourcesContent":[],"mappings":"","names":[]}

package/dist/universal-installer-AAXXYM5A.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../src/runtime/universal-installer.ts"],"sourcesContent":["import { existsSync, readFileSync, writeFileSync, mkdirSync, copyFileSync } from 'fs';\nimport { join, basename, extname } from 'path';\nimport { tmpdir } from 'os';\nimport { createRequire } from 'module';\nimport matter from 'gray-matter';\nimport { parse as parseYaml } from 'yaml';\nimport { fixCapability, installCapability, downloadCapability } from './intake.js';\nimport { autoProcessFile } from './auto-processor.js';\nimport { discoverSources, loadAllSources } from './sources.js';\nimport type { Source, SourceDiscoveryResult } from './sources.js';\nimport { log } from '../core/logger.js';\n\n// ─── Provenance ──────────────────────────────────────────────────────────────\n\n/**\n * Read the harness's own package.json version for the `installed_by` field.\n *\n * Has to handle three possible runtime layouts because tsup bundles flat:\n *   - Dev/test:   src/runtime/universal-installer.ts → ../../package.json\n *   - Built bin:  dist/cli/index.js                  → ../../package.json\n *   - Built lib:  dist/<bundle>.js                   → ../package.json\n *\n * Walks up one directory at a time, requires `package.json`, and returns\n * the version of the FIRST one whose name is `@agntk/agent-harness`. 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Good enough for the common cases\n * (MIT, Apache-2.0, BSD, ISC, GPL, MPL, CC) and the proprietary \"all rights reserved\"\n * pattern that bit us in v0.1.0.\n */\nfunction classifyLicenseText(text: string): string {\n  const lower = text.toLowerCase();\n  // PROPRIETARY check first — overrides any false-positive substring match below.\n  if (lower.includes('all rights reserved')) {\n    return 'PROPRIETARY';\n  }\n  // Then SPDX-by-substring. Order matters: check more-specific patterns first\n  // (e.g. AGPL before GPL, LGPL before GPL).\n  if (lower.includes('mit license')) return 'MIT';\n  if (lower.includes('apache license, version 2.0') || lower.includes('apache-2.0'))\n    return 'Apache-2.0';\n  if (lower.includes('mozilla public license version 2.0') || lower.includes('mpl-2.0'))\n    return 'MPL-2.0';\n  if (lower.includes('gnu affero general public license')) return 'AGPL-3.0';\n  if (lower.includes('gnu lesser general public license')) {\n    if (lower.includes('version 3')) return 'LGPL-3.0';\n    if (lower.includes('version 2')) return 'LGPL-2.1';\n  }\n  if (lower.includes('gnu general public license')) {\n    if (lower.includes('version 3')) return 'GPL-3.0';\n    if (lower.includes('version 2')) return 'GPL-2.0';\n  }\n  if (lower.includes('isc license')) return 'ISC';\n  if (lower.includes('cc0 1.0 universal') || lower.includes('cc0-1.0')) return 'CC0-1.0';\n  if (lower.includes('creative commons attribution-sharealike 4.0')) return 'CC-BY-SA-4.0';\n  if (lower.includes('creative commons attribution 4.0') || lower.includes('cc-by-4.0'))\n    return 'CC-BY-4.0';\n  if (\n    lower.includes('redistribution and use in source and binary forms') &&\n    lower.includes('neither the name of')\n  ) {\n    return 'BSD-3-Clause';\n  }\n  if (lower.includes('redistribution and use in source and binary forms')) {\n    return 'BSD-2-Clause';\n  }\n  if (lower.includes('this is free and unencumbered software released into the public domain')) {\n    return 'Unlicense';\n  }\n  return 'UNKNOWN';\n}\n\n/**\n * Extract the first `Copyright (c) YEAR ...` line from a license body.\n * Returns the trimmed line, or undefined if no copyright line is found.\n */\nfunction extractCopyright(text: string): string | undefined {\n  // Match lines starting with \"©\" or \"Copyright\" (any case) and containing a\n  // 4-digit year. The leading \"©\" can be followed immediately by space/digit\n  // (it's a non-word char so we don't put a \\b after it). \"Copyright\" can be\n  // followed by anything as long as a year appears later in the line.\n  const lines = text.split(/\\r?\\n/);\n  for (const line of lines) {\n    const trimmed = line.trim();\n    if (/^©\\s*\\d{4}/.test(trimmed) || /^copyright\\b.*\\d{4}/i.test(trimmed)) {\n      return trimmed;\n    }\n  }\n  return undefined;\n}\n\n/**\n * Try to fetch a single sibling LICENSE file next to the installed file.\n * Returns the body text on success, null on any failure (404, network, timeout).\n */\nasync function fetchSiblingLicense(\n  siblingUrl: string,\n): Promise<string | null> {\n  const controller = new AbortController();\n  const timeout = setTimeout(() => controller.abort(), 5000);\n  try {\n    const response = await fetch(siblingUrl, { signal: controller.signal });\n    if (!response.ok) return null;\n    return await response.text();\n  } catch {\n    return null;\n  } finally {\n    clearTimeout(timeout);\n  }\n}\n\n/**\n * Try to fetch the repo-root LICENSE via the GitHub License API.\n * Returns the SPDX id, html_url, and (when available) the decoded body text\n * so the caller can extract a copyright line. Null on any failure.\n *\n * The API response shape:\n *   {\n *     license: { spdx_id: \"MIT\" },\n *     html_url: \"https://github.com/owner/repo/blob/main/LICENSE\",\n *     content: \"<base64>\",\n *     encoding: \"base64\"\n *   }\n *\n * https://docs.github.com/en/rest/licenses/licenses#get-the-license-for-a-repository\n */\nasync function fetchGithubRepoLicense(\n  owner: string,\n  repo: string,\n): Promise<{ spdxId: string; htmlUrl: string; body?: string } | null> {\n  const apiUrl = `https://api.github.com/repos/${owner}/${repo}/license`;\n  const controller = new AbortController();\n  const timeout = setTimeout(() => controller.abort(), 5000);\n  try {\n    const response = await fetch(apiUrl, {\n      signal: controller.signal,\n      headers: { 'Accept': 'application/vnd.github+json' },\n    });\n    if (!response.ok) return null;\n    const data = (await response.json()) as {\n      license?: { spdx_id?: string };\n      html_url?: string;\n      content?: string;\n      encoding?: string;\n    };\n    const spdxId = data.license?.spdx_id;\n    if (!spdxId || spdxId === 'NOASSERTION') return null;\n\n    // Decode the base64-encoded body so the caller can extract copyright.\n    // Tolerant of failures — if decoding throws, just omit the body.\n    let body: string | undefined;\n    if (data.content && data.encoding === 'base64') {\n      try {\n        body = Buffer.from(data.content, 'base64').toString('utf-8');\n      } catch {\n        body = undefined;\n      }\n    }\n\n    return { spdxId, htmlUrl: data.html_url ?? '', body };\n  } catch {\n    return null;\n  } finally {\n    clearTimeout(timeout);\n  }\n}\n\n/**\n * Detect the license of a file at a given URL.\n *\n * Lookup order, strictest finding wins:\n *   1. Per-file LICENSE sibling in the same directory as the file.\n *      Catches the v0.1.0 case where each anthropics/skills/<skill>/\n *      directory contained its own proprietary LICENSE.txt.\n *   2. Repository root LICENSE via the GitHub License API. Returns SPDX id.\n *   3. Caller falls back to the source file's own frontmatter (handled in\n *      recordProvenance, not here).\n *\n * Strictness rule: PROPRIETARY > UNKNOWN > permissive SPDX. If a per-file\n * LICENSE says \"All rights reserved\" we never look at the repo root —\n * proprietary always wins.\n *\n * Non-github URLs return immediately with `{ spdxId: 'UNKNOWN' }` since we\n * have no way to look up a license. The caller can still use frontmatter.\n *\n * @param sourceUrl The URL the user passed to `harness install`\n * @returns LicenseInfo. Always returns an object — never throws or returns null.\n */\nexport async function detectLicense(sourceUrl: string): Promise<LicenseInfo> {\n  // Only github raw URLs have a structure we can probe.\n  const match = sourceUrl.match(\n    /^https?:\\/\\/raw\\.githubusercontent\\.com\\/([^/]+)\\/([^/]+)\\/([^/]+)\\/(.+)$/,\n  );\n  if (!match) {\n    return { spdxId: 'UNKNOWN' };\n  }\n  const [, owner, repo, ref, path] = match;\n\n  // 1. Per-file LICENSE sibling — split path into dir, then probe each filename.\n  const lastSlash = path.lastIndexOf('/');\n  const dir = lastSlash >= 0 ? path.slice(0, lastSlash) : '';\n  const dirPrefix = dir ? `${dir}/` : '';\n\n  for (const siblingName of SIBLING_LICENSE_NAMES) {\n    const siblingUrl = `https://raw.githubusercontent.com/${owner}/${repo}/${ref}/${dirPrefix}${siblingName}`;\n    const text = await fetchSiblingLicense(siblingUrl);\n    if (text) {\n      const spdxId = classifyLicenseText(text);\n      const copyright = extractCopyright(text);\n      return { spdxId, copyright, licenseSource: siblingUrl };\n    }\n  }\n\n  // 2. Repository root LICENSE via the GitHub License API. The API returns\n  //    the SPDX id directly, plus a base64-encoded body we can use to extract\n  //    a copyright line.\n  const repoLicense = await fetchGithubRepoLicense(owner, repo);\n  if (repoLicense) {\n    const copyright = repoLicense.body\n      ? extractCopyright(repoLicense.body)\n      : undefined;\n    return {\n      spdxId: repoLicense.spdxId,\n      copyright,\n      licenseSource: repoLicense.htmlUrl || undefined,\n    };\n  }\n\n  return { spdxId: 'UNKNOWN' };\n}\n\n/**\n * Inject provenance and license fields into a normalized markdown file's\n * frontmatter.\n *\n * Provenance rules (Level 1 of task 12.14):\n * - `source` and `source_commit` are preserved if already present (idempotent)\n * - `installed_at` and `installed_by` are always updated to reflect the most\n *   recent install action\n * - `source_commit` is only written when a SHA could be resolved\n *\n * License rules (Level 2 of task 12.14):\n * - `license`, `copyright`, `license_source` are preserved if already present\n *   in the source file's frontmatter (idempotent — author intent wins)\n * - Otherwise detected via detectLicense() and merged in\n * - License detection NEVER blocks the install. Failures result in\n *   `license: UNKNOWN` rather than an error.\n *\n * @param content Normalized markdown content with existing frontmatter\n * @param originalSource The exact URL the user passed to `harness install`\n * @returns The content with provenance + license fields merged into frontmatter\n */\nexport async function recordProvenance(\n  content: string,\n  originalSource: string,\n): Promise<string> {\n  let parsed: ReturnType<typeof matter>;\n  try {\n    parsed = matter(content);\n  } catch {\n    return content;\n  }\n\n  const data = parsed.data as Record<string, unknown>;\n\n  // Preserve existing source — idempotency rule\n  if (!data.source) {\n    data.source = originalSource;\n  }\n\n  // Preserve existing source_commit; only resolve if missing AND URL is github raw\n  if (!data.source_commit) {\n    const sha = await resolveGithubCommitSha(originalSource);\n    if (sha) {\n      data.source_commit = sha;\n    }\n  }\n\n  // License detection (Level 2). Idempotent: don't overwrite author-set fields.\n  // Only run detection if at least one license-related field is missing — saves\n  // the network calls when re-installing files that already carry their license.\n  if (!data.license || !data.copyright || !data.license_source) {\n    const license = await detectLicense(originalSource);\n    if (!data.license) {\n      data.license = license.spdxId;\n    }\n    if (!data.copyright && license.copyright) {\n      data.copyright = license.copyright;\n    }\n    if (!data.license_source && license.licenseSource) {\n      data.license_source = license.licenseSource;\n    }\n  }\n\n  // Always update these to reflect the most recent install\n  data.installed_at = new Date().toISOString();\n  data.installed_by = `agent-harness@${getHarnessVersion()}`;\n\n  return matter.stringify(parsed.content, data);\n}\n\n// ─── Types ───────────────────────────────────────────────────────────────────\n\n/** Detected source format of a file to be installed. */\nexport type SourceFormat =\n  | 'harness'         // Already harness convention (frontmatter + L0/L1)\n  | 'claude-skill'    // Claude Code SKILL.md (plain markdown, no frontmatter)\n  | 'faf-yaml'        // .faf YAML format\n  | 'raw-markdown'    // Plain markdown with no harness structure\n  | 'bash-hook'       // Bash/shell script (hook or workflow)\n  | 'mcp-config'      // MCP server configuration (JSON/YAML)\n  | 'unknown';\n\n/** Result of format detection. */\nexport interface FormatDetection {\n  /** Detected format */\n  format: SourceFormat;\n  /** Inferred primitive type (skill, agent, rule, etc.) */\n  primitiveType: string | null;\n  /** Confidence score (0-1) */\n  confidence: number;\n  /** Reasons for the detection */\n  reasons: string[];\n}\n\n/** Result of a universal install operation. */\nexport interface UniversalInstallResult {\n  /** Whether installation succeeded */\n  installed: boolean;\n  /** Source reference that was resolved */\n  source: string;\n  /** Detected format */\n  format: FormatDetection;\n  /** Path where the file was installed */\n  destination: string;\n  /** Fixes applied during normalization */\n  fixes: string[];\n  /** Errors encountered */\n  errors: string[];\n  /** Suggested dependencies to install */\n  suggestedDependencies: string[];\n}\n\n/** Options for the universal installer. */\nexport interface UniversalInstallOptions {\n  /** Override the detected primitive type (skill, rule, agent, etc.) */\n  type?: string;\n  /** Override the generated ID */\n  id?: string;\n  /** Force install even if validation has warnings */\n  force?: boolean;\n  /** Skip auto-fix (frontmatter, L0/L1 generation) */\n  skipFix?: boolean;\n  /** Additional tags to add */\n  tags?: string[];\n}\n\n// ─── Constants ───────────────────────────────────────────────────────────────\n\nconst VALID_TYPES = ['rule', 'instinct', 'skill', 'playbook', 'workflow', 'tool', 'agent'];\n\nconst TYPE_DIRS: Record<string, string> = {\n  rule: 'rules',\n  instinct: 'instincts',\n  skill: 'skills',\n  playbook: 'playbooks',\n  workflow: 'workflows',\n  tool: 'tools',\n  agent: 'agents',\n};\n\n// ─── Format Detection ────────────────────────────────────────────────────────\n\n/**\n * Detect the format of a file based on its content and extension.\n *\n * Detection heuristics:\n * - Has `---` frontmatter with `id:` + `status:` → harness convention\n * - Has `---` frontmatter but missing harness fields → raw-markdown\n * - `.faf` or `.yaml`/`.yml` with `type:` + `content:` keys → faf-yaml\n * - `.sh`/`.bash` or starts with `#!/` → bash-hook\n * - JSON/YAML with `mcpServers` or `servers` → mcp-config\n * - Plain markdown with no frontmatter → claude-skill or raw-markdown\n */\nexport function detectFormat(content: string, filename: string): FormatDetection {\n  const ext = extname(filename).toLowerCase();\n  const reasons: string[] = [];\n  let format: SourceFormat = 'unknown';\n  let primitiveType: string | null = null;\n  let confidence = 0;\n\n  // Check for bash/shell scripts\n  if (ext === '.sh' || ext === '.bash' || content.trimStart().startsWith('#!/')) {\n    format = 'bash-hook';\n    primitiveType = 'workflow';\n    confidence = 0.9;\n    reasons.push('Shell script detected (shebang or .sh extension)');\n\n    // Hooks are typically short scripts with specific patterns\n    if (content.includes('hook') || content.includes('pre-commit') || content.includes('post-')) {\n      primitiveType = 'workflow';\n      reasons.push('Hook pattern detected in content');\n    }\n\n    return { format, primitiveType, confidence, reasons };\n  }\n\n  // Check for JSON/YAML MCP configs\n  if (ext === '.json') {\n    try {\n      const parsed = JSON.parse(content) as Record<string, unknown>;\n      if (parsed.mcpServers || parsed.servers || parsed.command || parsed.args) {\n        format = 'mcp-config';\n        primitiveType = 'tool';\n        confidence = 0.9;\n        reasons.push('MCP configuration JSON detected');\n        return { format, primitiveType, confidence, reasons };\n      }\n    } catch {\n      // Not valid JSON, continue\n    }\n  }\n\n  // Check for .faf YAML format\n  if (ext === '.faf' || ext === '.yaml' || ext === '.yml') {\n    try {\n      const parsed = parseYaml(content) as Record<string, unknown>;\n      if (parsed.type && parsed.content) {\n        format = 'faf-yaml';\n        primitiveType = inferTypeFromFafType(String(parsed.type));\n        confidence = 0.9;\n        reasons.push(`.faf YAML format with type: ${parsed.type}`);\n        return { format, primitiveType, confidence, reasons };\n      }\n      // YAML with mcpServers\n      if (parsed.mcpServers || parsed.servers) {\n        format = 'mcp-config';\n        primitiveType = 'tool';\n        confidence = 0.85;\n        reasons.push('MCP configuration YAML detected');\n        return { format, primitiveType, confidence, reasons };\n      }\n    } catch {\n      // Not valid YAML, continue\n    }\n  }\n\n  // Check for markdown content\n  if (ext === '.md' || ext === '' || !ext) {\n    // Try to parse frontmatter\n    try {\n      const parsed = matter(content);\n      const data = parsed.data as Record<string, unknown>;\n\n      if (data.id && data.status) {\n        // Has harness-style frontmatter\n        format = 'harness';\n        confidence = 0.95;\n        reasons.push('Harness frontmatter detected (id + status fields)');\n\n        // Detect type from tags\n        const tags = Array.isArray(data.tags)\n          ? (data.tags as string[]).map((t) => String(t).toLowerCase())\n          : [];\n        for (const type of VALID_TYPES) {\n          if (tags.includes(type)) {\n            primitiveType = type;\n            break;\n          }\n        }\n\n        return { format, primitiveType, confidence, reasons };\n      }\n\n      if (Object.keys(data).length > 0) {\n        // Has some frontmatter but not harness convention\n        format = 'raw-markdown';\n        confidence = 0.7;\n        reasons.push('Markdown with non-harness frontmatter');\n      }\n    } catch {\n      // No frontmatter or parse error\n    }\n\n    // Check for Claude Code SKILL.md patterns\n    if (format === 'unknown' || format === 'raw-markdown') {\n      const isClaudeSkill = detectClaudeSkillPattern(content, filename);\n      if (isClaudeSkill) {\n        format = 'claude-skill';\n        primitiveType = 'skill';\n        confidence = 0.8;\n        reasons.push('Claude Code SKILL.md pattern detected');\n        return { format, primitiveType, confidence, reasons };\n      }\n    }\n\n    // Plain markdown — infer type from content\n    if (format === 'unknown') {\n      format = 'raw-markdown';\n      confidence = 0.5;\n      reasons.push('Plain markdown without frontmatter');\n    }\n\n    // Try to infer type from content/filename\n    if (!primitiveType) {\n      primitiveType = inferTypeFromContent(content, filename);\n      if (primitiveType) {\n        reasons.push(`Type inferred from content/filename: ${primitiveType}`);\n      }\n    }\n\n    return { format, primitiveType, confidence, reasons };\n  }\n\n  return { format, primitiveType, confidence, reasons };\n}\n\n// ─── Format Normalization ────────────────────────────────────────────────────\n\n/**\n * Normalize content from any detected format to harness convention.\n * Returns the normalized markdown content ready for writing.\n */\nexport function normalizeToHarness(\n  content: string,\n  filename: string,\n  detection: FormatDetection,\n  options?: UniversalInstallOptions,\n): { content: string; filename: string; fixes: string[] } {\n  const fixes: string[] = [];\n  const type = options?.type ?? detection.primitiveType;\n\n  switch (detection.format) {\n    case 'harness':\n      // Already in harness format — just pass through\n      return { content, filename, fixes: ['Already in harness format'] };\n\n    case 'claude-skill':\n      return normalizeClaudeSkill(content, filename, type, options, fixes);\n\n    case 'faf-yaml':\n      return normalizeFafYaml(content, filename, type, options, fixes);\n\n    case 'raw-markdown':\n      return normalizeRawMarkdown(content, filename, type, options, fixes);\n\n    case 'bash-hook':\n      return normalizeBashHook(content, filename, type, options, fixes);\n\n    case 'mcp-config':\n      return normalizeMcpConfig(content, filename, options, fixes);\n\n    default:\n      return normalizeRawMarkdown(content, filename, type, options, fixes);\n  }\n}\n\n/**\n * Convert Claude Code SKILL.md to harness convention.\n * Claude skills are plain markdown — add frontmatter + L0/L1.\n */\nfunction normalizeClaudeSkill(\n  content: string,\n  filename: string,\n  type: string | null,\n  options: UniversalInstallOptions | undefined,\n  fixes: string[],\n): { content: string; filename: string; fixes: string[] } {\n  const id = options?.id ?? deriveId(filename);\n  const primitiveType = type ?? 'skill';\n  const tags = [primitiveType, ...(options?.tags ?? [])];\n\n  // Extract first heading as title\n  const headingMatch = content.match(/^#\\s+(.+)$/m);\n  const title = headingMatch ? headingMatch[1].trim() : id;\n\n  const frontmatter: Record<string, unknown> = {\n    id,\n    created: new Date().toISOString().split('T')[0],\n    author: 'human',\n    status: 'active',\n    tags,\n  };\n\n  // Generate L0 from title/first heading\n  const l0 = title.length > 120 ? title.slice(0, 117) + '...' : title;\n\n  // Generate L1 from first paragraph\n  const paragraphs = content.split(/\\n{2,}/).filter((p) => {\n    const trimmed = p.trim();\n    return trimmed.length > 0 && !trimmed.startsWith('#') && !trimmed.startsWith('<!--');\n  });\n  const l1 = paragraphs.length > 0\n    ? paragraphs[0].replace(/\\n/g, ' ').trim().slice(0, 300)\n    : '';\n\n  let body = `<!-- L0: ${l0} -->\\n`;\n  if (l1) {\n    body += `<!-- L1: ${l1} -->\\n`;\n  }\n  body += '\\n' + content;\n\n  const result = matter.stringify(body, frontmatter);\n  fixes.push('Added harness frontmatter (id, status, tags)');\n  fixes.push(`Generated L0 from heading: \"${l0}\"`);\n  if (l1) fixes.push('Generated L1 from first paragraph');\n\n  const outFilename = ensureMdExtension(filename);\n  return { content: result, filename: outFilename, fixes };\n}\n\n/**\n * Convert .faf YAML format to harness markdown.\n */\nfunction normalizeFafYaml(\n  content: string,\n  filename: string,\n  type: string | null,\n  options: UniversalInstallOptions | undefined,\n  fixes: string[],\n): { content: string; filename: string; fixes: string[] } {\n  let parsed: Record<string, unknown>;\n  try {\n    parsed = parseYaml(content) as Record<string, unknown>;\n  } catch {\n    fixes.push('Failed to parse YAML — treating as raw markdown');\n    return normalizeRawMarkdown(content, filename, type, options, fixes);\n  }\n\n  const id = options?.id ?? String(parsed.id ?? deriveId(filename));\n  const fafType = String(parsed.type ?? 'skill');\n  const primitiveType = type ?? inferTypeFromFafType(fafType) ?? 'skill';\n  const title = String(parsed.title ?? parsed.name ?? id);\n  const description = String(parsed.description ?? '');\n  const fafContent = String(parsed.content ?? '');\n  const fafTags = Array.isArray(parsed.tags)\n    ? (parsed.tags as string[]).map(String)\n    : [];\n\n  const tags = [primitiveType, ...fafTags, ...(options?.tags ?? [])];\n\n  const frontmatter: Record<string, unknown> = {\n    id,\n    created: new Date().toISOString().split('T')[0],\n    author: 'human',\n    status: 'active',\n    tags: [...new Set(tags)],\n  };\n\n  const l0 = title.length > 120 ? title.slice(0, 117) + '...' : title;\n  const l1 = description.length > 300 ? description.slice(0, 297) + '...' : description;\n\n  let body = `<!-- L0: ${l0} -->\\n`;\n  if (l1) body += `<!-- L1: ${l1} -->\\n`;\n  body += `\\n# ${title}\\n\\n`;\n  if (description) body += `${description}\\n\\n`;\n  if (fafContent) body += fafContent + '\\n';\n\n  const result = matter.stringify(body, frontmatter);\n  fixes.push('Converted .faf YAML to harness markdown');\n  fixes.push(`Added frontmatter (id: ${id}, type: ${primitiveType})`);\n\n  const outFilename = deriveId(filename) + '.md';\n  return { content: result, filename: outFilename, fixes };\n}\n\n/**\n * Normalize raw markdown (no frontmatter or non-harness frontmatter).\n */\nfunction normalizeRawMarkdown(\n  content: string,\n  filename: string,\n  type: string | null,\n  options: UniversalInstallOptions | undefined,\n  fixes: string[],\n): { content: string; filename: string; fixes: string[] } {\n  const id = options?.id ?? deriveId(filename);\n  const primitiveType = type ?? 'skill';\n  const tags = [primitiveType, ...(options?.tags ?? [])];\n\n  // Try to preserve any existing frontmatter\n  let parsed: ReturnType<typeof matter>;\n  try {\n    parsed = matter(content);\n  } catch {\n    parsed = { data: {}, content, orig: '', excerpt: '', language: '', matter: '', stringify: () => '' } as ReturnType<typeof matter>;\n  }\n\n  const data = parsed.data as Record<string, unknown>;\n\n  // Set required harness fields — options override existing values\n  if (options?.id || !data.id) {\n    data.id = id;\n    fixes.push(`Set id: \"${id}\"`);\n  }\n  if (!data.status) {\n    data.status = 'active';\n    fixes.push('Added status: \"active\"');\n  }\n  if (!data.created) {\n    data.created = new Date().toISOString().split('T')[0];\n    fixes.push('Added created date');\n  }\n  if (!data.author || !['human', 'agent', 'infrastructure'].includes(String(data.author))) {\n    data.author = 'human';\n    fixes.push('Added author: \"human\"');\n  }\n  if (!Array.isArray(data.tags) || data.tags.length === 0) {\n    data.tags = [...new Set(tags)];\n    fixes.push(`Added tags: [${(data.tags as string[]).join(', ')}]`);\n  }\n\n  let body = parsed.content;\n\n  // Add L0 if missing\n  const l0Regex = /<!--\\s*L0:\\s*(.*?)\\s*-->/;\n  if (!l0Regex.test(body)) {\n    const headingMatch = body.match(/^#\\s+(.+)$/m);\n    const firstLine = body.split('\\n').find((line) => line.trim().length > 0);\n    const summary = headingMatch ? headingMatch[1].trim() : (firstLine?.trim() ?? id);\n    const l0 = summary.length > 120 ? summary.slice(0, 117) + '...' : summary;\n    body = `<!-- L0: ${l0} -->\\n${body}`;\n    fixes.push(`Generated L0: \"${l0}\"`);\n  }\n\n  // Add L1 if missing\n  const l1Regex = /<!--\\s*L1:\\s*([\\s\\S]*?)\\s*-->/;\n  if (!l1Regex.test(body)) {\n    const paragraphs = body.split(/\\n{2,}/).filter((p) => {\n      const trimmed = p.trim();\n      return trimmed.length > 0 && !trimmed.startsWith('<!--') && !trimmed.startsWith('#');\n    });\n    if (paragraphs.length > 0) {\n      const para = paragraphs[0].replace(/\\n/g, ' ').trim();\n      const l1 = para.length > 300 ? para.slice(0, 297) + '...' : para;\n      const l0Pos = body.indexOf('-->');\n      if (l0Pos !== -1) {\n        const insertPos = l0Pos + 3;\n        body = body.slice(0, insertPos) + `\\n<!-- L1: ${l1} -->` + body.slice(insertPos);\n      } else {\n        body = `<!-- L1: ${l1} -->\\n${body}`;\n      }\n      fixes.push('Generated L1 from first paragraph');\n    }\n  }\n\n  const result = matter.stringify(body, data);\n  const outFilename = ensureMdExtension(filename);\n  return { content: result, filename: outFilename, fixes };\n}\n\n/**\n * Wrap a bash hook script in harness markdown.\n */\nfunction normalizeBashHook(\n  content: string,\n  filename: string,\n  type: string | null,\n  options: UniversalInstallOptions | undefined,\n  fixes: string[],\n): { content: string; filename: string; fixes: string[] } {\n  const id = options?.id ?? deriveId(filename);\n  const primitiveType = type ?? 'workflow';\n  const tags = [primitiveType, 'hook', ...(options?.tags ?? [])];\n\n  // Extract description from comments at top of script\n  const commentLines = content.split('\\n')\n    .filter((line) => line.startsWith('#') && !line.startsWith('#!'))\n    .map((line) => line.replace(/^#\\s?/, '').trim())\n    .filter((line) => line.length > 0);\n\n  const description = commentLines.length > 0\n    ? commentLines.slice(0, 3).join(' ')\n    : `Bash hook: ${id}`;\n\n  const frontmatter: Record<string, unknown> = {\n    id,\n    created: new Date().toISOString().split('T')[0],\n    author: 'human',\n    status: 'active',\n    tags: [...new Set(tags)],\n  };\n\n  const l0 = description.length > 120 ? description.slice(0, 117) + '...' : description;\n\n  let body = `<!-- L0: ${l0} -->\\n\\n`;\n  body += `# ${id}\\n\\n`;\n  body += `${description}\\n\\n`;\n  body += '```bash\\n';\n  body += content;\n  if (!content.endsWith('\\n')) body += '\\n';\n  body += '```\\n';\n\n  const result = matter.stringify(body, frontmatter);\n  fixes.push('Wrapped bash script in harness markdown');\n  fixes.push(`Added frontmatter (id: ${id}, type: ${primitiveType})`);\n\n  const outFilename = deriveId(filename) + '.md';\n  return { content: result, filename: outFilename, fixes };\n}\n\n/**\n * Convert an MCP config to harness tool documentation.\n */\nfunction normalizeMcpConfig(\n  content: string,\n  filename: string,\n  options: UniversalInstallOptions | undefined,\n  fixes: string[],\n): { content: string; filename: string; fixes: string[] } {\n  const id = options?.id ?? deriveId(filename);\n  const tags = ['tool', 'mcp', ...(options?.tags ?? [])];\n\n  // Try to parse config\n  let config: Record<string, unknown> = {};\n  const ext = extname(filename).toLowerCase();\n  try {\n    if (ext === '.json') {\n      config = JSON.parse(content) as Record<string, unknown>;\n    } else {\n      config = parseYaml(content) as Record<string, unknown>;\n    }\n  } catch {\n    fixes.push('Failed to parse MCP config');\n  }\n\n  const serverName = String(config.name ?? config.command ?? id);\n  const description = String(config.description ?? `MCP server: ${serverName}`);\n\n  const frontmatter: Record<string, unknown> = {\n    id,\n    created: new Date().toISOString().split('T')[0],\n    author: 'human',\n    status: 'active',\n    tags: [...new Set(tags)],\n  };\n\n  const l0 = description.length > 120 ? description.slice(0, 117) + '...' : description;\n\n  let body = `<!-- L0: ${l0} -->\\n\\n`;\n  body += `# MCP Server: ${serverName}\\n\\n`;\n  body += `${description}\\n\\n`;\n  body += '## Configuration\\n\\n';\n  body += '```json\\n';\n  body += JSON.stringify(config, null, 2);\n  body += '\\n```\\n';\n\n  const result = matter.stringify(body, frontmatter);\n  fixes.push('Converted MCP config to harness tool documentation');\n  fixes.push(`Added frontmatter (id: ${id})`);\n\n  const outFilename = deriveId(filename) + '.md';\n  return { content: result, filename: outFilename, fixes };\n}\n\n// ─── Source Resolution ───────────────────────────────────────────────────────\n\n/**\n * Resolve a source reference to a local file path.\n *\n * Supports:\n * - Local file paths (absolute or relative)\n * - HTTPS URLs (GitHub raw, any markdown URL)\n * - Source query (searches registered sources)\n *\n * @returns Path to a local file (downloaded if remote)\n */\nexport async function resolveSource(\n  source: string,\n  harnessDir: string,\n): Promise<{ localPath: string; originalSource: string; error?: string }> {\n  // Case 1: Local file path\n  if (existsSync(source)) {\n    return { localPath: source, originalSource: source };\n  }\n\n  // Case 2: URL\n  if (source.startsWith('https://') || source.startsWith('http://')) {\n    // Convert GitHub URL to raw if needed\n    const rawUrl = convertToRawUrl(source);\n    const result = await downloadCapability(rawUrl);\n    if (result.downloaded) {\n      return { localPath: result.localPath, originalSource: source };\n    }\n    return { localPath: '', originalSource: source, error: result.error };\n  }\n\n  // Case 3: Source registry lookup — search known sources\n  const results = discoverSources(harnessDir, source, { maxResults: 1 });\n  if (results.length > 0) {\n    const hit = results[0];\n    // If the source is a GitHub source, construct a raw URL\n    if (hit.source.type === 'github') {\n      const rawUrl = convertToRawUrl(hit.url);\n      const result = await downloadCapability(rawUrl);\n      if (result.downloaded) {\n        return { localPath: result.localPath, originalSource: source };\n      }\n      return { localPath: '', originalSource: source, error: result.error };\n    }\n    return { localPath: '', originalSource: source, error: `Source \"${hit.source.name}\" is type \"${hit.source.type}\" — direct install not yet supported for this type` };\n  }\n\n  return { localPath: '', originalSource: source, error: `Could not resolve \"${source}\" — not a local file, URL, or known source` };\n}\n\n// ─── Main Install Function ───────────────────────────────────────────────────\n\n/**\n * Universal install: resolve → detect → normalize → fix → install.\n *\n * Accepts a local path, URL, or search query. Detects the format,\n * normalizes to harness convention, applies auto-fixes, and installs\n * to the correct directory.\n *\n * @param harnessDir - Harness directory\n * @param source - File path, URL, or name to install\n * @param options - Installation options\n * @returns Install result with status, fixes, errors, dependency hints\n */\nexport async function universalInstall(\n  harnessDir: string,\n  source: string,\n  options?: UniversalInstallOptions,\n): Promise<UniversalInstallResult> {\n  const result: UniversalInstallResult = {\n    installed: false,\n    source,\n    format: { format: 'unknown', primitiveType: null, confidence: 0, reasons: [] },\n    destination: '',\n    fixes: [],\n    errors: [],\n    suggestedDependencies: [],\n  };\n\n  // Step 1: Resolve source to local file\n  const resolved = await resolveSource(source, harnessDir);\n  if (resolved.error || !resolved.localPath) {\n    result.errors.push(resolved.error ?? 'Failed to resolve source');\n    return result;\n  }\n\n  // Step 2: Read content\n  let content: string;\n  try {\n    content = readFileSync(resolved.localPath, 'utf-8');\n  } catch (err) {\n    result.errors.push(`Failed to read file: ${err instanceof Error ? err.message : String(err)}`);\n    return result;\n  }\n\n  if (content.trim().length === 0) {\n    result.errors.push('File is empty');\n    return result;\n  }\n\n  // Step 3: Detect format\n  const filename = basename(resolved.localPath);\n  const detection = detectFormat(content, filename);\n  result.format = detection;\n\n  // Step 4: Normalize to harness convention\n  const normalized = normalizeToHarness(content, filename, detection, options);\n  result.fixes.push(...normalized.fixes);\n\n  // Step 4b: Record provenance for URL installs so every installed file is\n  // traceable back to its source. Local-path installs are skipped — the path\n  // on disk is not a stable identifier.\n  let finalContent = normalized.content;\n  if (source.startsWith('http://') || source.startsWith('https://')) {\n    finalContent = await recordProvenance(finalContent, source);\n    result.fixes.push('Recorded provenance (source, installed_at, installed_by)');\n  }\n\n  // Step 5: Write normalized content to temp file for installation\n  const tempDir = join(tmpdir(), 'harness-install');\n  mkdirSync(tempDir, { recursive: true });\n  const tempPath = join(tempDir, normalized.filename);\n  writeFileSync(tempPath, finalContent, 'utf-8');\n\n  // Step 6: Apply auto-fix if not skipped\n  if (!options?.skipFix) {\n    const fixResult = fixCapability(tempPath);\n    result.fixes.push(...fixResult.fixes_applied);\n\n    if (!fixResult.valid && !options?.force) {\n      result.errors.push(...fixResult.errors);\n      return result;\n    }\n  }\n\n  // Step 7: Install via existing pipeline\n  const installResult = installCapability(harnessDir, tempPath);\n  result.installed = installResult.installed;\n  result.destination = installResult.destination;\n\n  if (!installResult.installed) {\n    result.errors.push(...installResult.evalResult.errors);\n    // If force mode, try direct copy\n    if (options?.force && detection.primitiveType) {\n      const targetDir = join(harnessDir, TYPE_DIRS[detection.primitiveType] ?? 'skills');\n      if (!existsSync(targetDir)) mkdirSync(targetDir, { recursive: true });\n      const dest = join(targetDir, normalized.filename);\n      copyFileSync(tempPath, dest);\n      result.installed = true;\n      result.destination = dest;\n      result.fixes.push('Force-installed despite validation errors');\n    }\n  }\n\n  // Step 8: Scan for dependency hints\n  result.suggestedDependencies = extractDependencyHints(normalized.content);\n\n  return result;\n}\n\n/**\n * Install from a URL (convenience wrapper).\n */\nexport async function installFromUrl(\n  harnessDir: string,\n  url: string,\n  options?: UniversalInstallOptions,\n): Promise<UniversalInstallResult> {\n  return universalInstall(harnessDir, url, options);\n}\n\n/**\n * Install from a local file path (convenience wrapper).\n */\nexport async function installFromFile(\n  harnessDir: string,\n  filePath: string,\n  options?: UniversalInstallOptions,\n): Promise<UniversalInstallResult> {\n  return universalInstall(harnessDir, filePath, options);\n}\n\n// ─── Helpers ─────────────────────────────────────────────────────────────────\n\nfunction deriveId(filename: string): string {\n  const base = basename(filename).replace(/\\.(md|faf|yaml|yml|json|sh|bash)$/i, '');\n  return base.replace(/[^a-z0-9-]/gi, '-').toLowerCase();\n}\n\nfunction ensureMdExtension(filename: string): string {\n  if (filename.endsWith('.md')) return filename;\n  return deriveId(filename) + '.md';\n}\n\n/**\n * Convert a GitHub URL to its raw content URL.\n *\n * Handles:\n * - github.com/owner/repo/blob/branch/path → raw.githubusercontent.com/owner/repo/branch/path\n * - Already raw.githubusercontent.com URLs → pass through\n * - Other URLs → pass through\n */\nexport function convertToRawUrl(url: string): string {\n  // Already raw\n  if (url.includes('raw.githubusercontent.com')) return url;\n\n  // GitHub blob URL → raw\n  const blobMatch = url.match(\n    /^https?:\\/\\/github\\.com\\/([^/]+)\\/([^/]+)\\/blob\\/(.+)$/,\n  );\n  if (blobMatch) {\n    const [, owner, repo, rest] = blobMatch;\n    return `https://raw.githubusercontent.com/${owner}/${repo}/${rest}`;\n  }\n\n  return url;\n}\n\n/**\n * Detect if content matches Claude Code SKILL.md patterns.\n * Claude skills are plain markdown with specific structural patterns.\n */\nfunction detectClaudeSkillPattern(content: string, filename: string): boolean {\n  const nameLower = filename.toLowerCase();\n\n  // Filename patterns\n  if (nameLower === 'skill.md' || nameLower.endsWith('-skill.md') || nameLower.endsWith('_skill.md')) {\n    return true;\n  }\n\n  // Content patterns common in Claude Code skills\n  const patterns = [\n    /^#\\s+.+skill/im,\n    /instructions?\\s+for\\s+/i,\n    /when\\s+(the\\s+)?user\\s+(asks?|wants?|needs?|requests?)/i,\n    /you\\s+(should|must|will)\\s+/i,\n  ];\n\n  let matches = 0;\n  for (const pattern of patterns) {\n    if (pattern.test(content)) matches++;\n  }\n\n  // Need at least 2 pattern matches to classify as Claude skill\n  // (plain markdown + instructional tone)\n  return matches >= 2 && !content.startsWith('---');\n}\n\nfunction inferTypeFromFafType(fafType: string): string | null {\n  const typeMap: Record<string, string> = {\n    skill: 'skill',\n    agent: 'agent',\n    rule: 'rule',\n    playbook: 'playbook',\n    workflow: 'workflow',\n    tool: 'tool',\n    instinct: 'instinct',\n    hook: 'workflow',\n    template: 'skill',\n    plugin: 'skill',\n  };\n\n  return typeMap[fafType.toLowerCase()] ?? null;\n}\n\nfunction inferTypeFromContent(content: string, filename: string): string | null {\n  const lower = content.toLowerCase();\n  const nameLower = filename.toLowerCase();\n\n  // From filename\n  if (nameLower.includes('rule')) return 'rule';\n  if (nameLower.includes('agent')) return 'agent';\n  if (nameLower.includes('playbook')) return 'playbook';\n  if (nameLower.includes('workflow')) return 'workflow';\n  if (nameLower.includes('instinct')) return 'instinct';\n  if (nameLower.includes('tool')) return 'tool';\n  if (nameLower.includes('skill')) return 'skill';\n\n  // From content patterns\n  if (lower.includes('# rule:') || lower.includes('## rules')) return 'rule';\n  if (lower.includes('# agent:') || lower.includes('## agent')) return 'agent';\n  if (lower.includes('# playbook:') || lower.includes('## playbook')) return 'playbook';\n  if (lower.includes('# skill:') || lower.includes('## skill')) return 'skill';\n  if (lower.includes('# workflow:') || lower.includes('## workflow')) return 'workflow';\n  if (lower.includes('# tool:') || lower.includes('## tool')) return 'tool';\n\n  // Default for markdown without clear type\n  return null;\n}\n\n/**\n * Extract dependency hints from content.\n * Looks for references to tools, skills, or other primitives.\n */\nfunction extractDependencyHints(content: string): string[] {\n  const hints: string[] = [];\n  const seen = new Set<string>();\n\n  // Look for \"requires:\" or \"depends:\" in frontmatter\n  try {\n    const parsed = matter(content);\n    const data = parsed.data as Record<string, unknown>;\n    if (Array.isArray(data.requires)) {\n      for (const dep of data.requires as string[]) {\n        if (!seen.has(dep)) {\n          hints.push(dep);\n          seen.add(dep);\n        }\n      }\n    }\n    if (Array.isArray(data.depends)) {\n      for (const dep of data.depends as string[]) {\n        if (!seen.has(dep)) {\n          hints.push(dep);\n          seen.add(dep);\n        }\n      }\n    }\n    if (Array.isArray(data.related)) {\n      for (const dep of data.related as string[]) {\n        if (!seen.has(dep)) {\n          hints.push(dep);\n          seen.add(dep);\n        }\n      }\n    }\n  } catch {\n    // Ignore parse errors\n  }\n\n  return 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