@agents-inc/cli 0.84.1 → 0.86.0

package/dist/commands/diff.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/commands/diff.ts","../../node_modules/chalk/source/index.js","../../node_modules/chalk/source/vendor/ansi-styles/index.js","../../node_modules/chalk/source/vendor/supports-color/index.js","../../node_modules/chalk/source/utilities.js"],"sourcesContent":["import { Args, Flags } from \"@oclif/core\";\nimport chalk from \"chalk\";\nimport os from \"os\";\nimport path from \"path\";\nimport { createTwoFilesPatch } from \"diff\";\nimport { BaseCommand } from \"../base-command.js\";\nimport { getErrorMessage } from \"../utils/errors.js\";\nimport { loadSkillsMatrixFromSource } from \"../lib/loading/index.js\";\nimport { EXIT_CODES } from \"../lib/exit-codes.js\";\nimport { readForkedFromMetadata, type ForkedFromMetadata } from \"../lib/skills/index.js\";\nimport { fileExists, readFile, listDirectories } from \"../utils/fs.js\";\nimport { CLI_BIN_NAME, LOCAL_SKILLS_PATH, STANDARD_FILES } from \"../consts.js\";\n\ntype SkillDiffResult = {\n  skillDirName: string;\n  forkedFrom: ForkedFromMetadata | null;\n  hasDiff: boolean;\n  diffOutput: string;\n};\n\nfunction colorDiff(diffText: string): string {\n  return diffText\n    .split(\"\\n\")\n    .map((line) => {\n      if (line.startsWith(\"+++\") || line.startsWith(\"---\")) {\n        return chalk.bold(line);\n      }\n      if (line.startsWith(\"+\")) {\n        return chalk.green(line);\n      }\n      if (line.startsWith(\"-\")) {\n        return chalk.red(line);\n      }\n      if (line.startsWith(\"@@\")) {\n        return chalk.cyan(line);\n      }\n      return line;\n    })\n    .join(\"\\n\");\n}\n\nasync function diffSkill(\n  localSkillsPath: string,\n  skillDirName: string,\n  sourcePath: string,\n  sourceSkills: Record<string, { path: string }>,\n): Promise<SkillDiffResult> {\n  const skillDir = path.join(localSkillsPath, skillDirName);\n  const forkedFrom = await readForkedFromMetadata(skillDir);\n\n  if (!forkedFrom) {\n    return {\n      skillDirName,\n      forkedFrom: null,\n      hasDiff: false,\n      diffOutput: \"\",\n    };\n  }\n\n  const sourceSkill = sourceSkills[forkedFrom.skillId];\n\n  if (!sourceSkill) {\n    return {\n      skillDirName,\n      forkedFrom,\n      hasDiff: false,\n      diffOutput: `Source skill '${forkedFrom.skillId}' no longer exists`,\n    };\n  }\n\n  const sourceSkillMdPath = path.join(sourcePath, \"src\", sourceSkill.path, STANDARD_FILES.SKILL_MD);\n\n  if (!(await fileExists(sourceSkillMdPath))) {\n    return {\n      skillDirName,\n      forkedFrom,\n      hasDiff: false,\n      diffOutput: `Source ${STANDARD_FILES.SKILL_MD} not found at ${sourceSkillMdPath}`,\n    };\n  }\n\n  const sourceContent = await readFile(sourceSkillMdPath);\n\n  const localSkillMdPath = path.join(skillDir, STANDARD_FILES.SKILL_MD);\n\n  if (!(await fileExists(localSkillMdPath))) {\n    return {\n      skillDirName,\n      forkedFrom,\n      hasDiff: false,\n      diffOutput: `Local ${STANDARD_FILES.SKILL_MD} not found at ${localSkillMdPath}`,\n    };\n  }\n\n  const localContent = await readFile(localSkillMdPath);\n\n  const sourceLabel = `source/${sourceSkill.path}/SKILL.md`;\n  const localLabel = `local/${LOCAL_SKILLS_PATH}/${skillDirName}/SKILL.md`;\n\n  const diff = createTwoFilesPatch(\n    sourceLabel,\n    localLabel,\n    sourceContent,\n    localContent,\n    \"\", // No source header\n    \"\", // No local header\n  );\n\n  const hasDiff = diff.split(\"\\n\").some((line) => {\n    return (\n      (line.startsWith(\"+\") || line.startsWith(\"-\")) &&\n      !line.startsWith(\"+++\") &&\n      !line.startsWith(\"---\")\n    );\n  });\n\n  return {\n    skillDirName,\n    forkedFrom,\n    hasDiff,\n    diffOutput: diff,\n  };\n}\n\nexport default class Diff extends BaseCommand {\n  static summary = \"Show differences between local forked skills and their source versions\";\n  static description =\n    \"Compare local forked skills with their source versions and display differences using unified diff format with colored output\";\n\n  static examples = [\n    {\n      description: \"Show diffs for all forked skills\",\n      command: \"<%= config.bin %> <%= command.id %>\",\n    },\n    {\n      description: \"Show diff for a specific skill\",\n      command: \"<%= config.bin %> <%= command.id %> my-skill\",\n    },\n    {\n      description: \"Check for diffs without output (exit code only)\",\n      command: \"<%= config.bin %> <%= command.id %> --quiet\",\n    },\n  ];\n\n  static args = {\n    skill: Args.string({\n      description: \"Show diff for specific skill only\",\n      required: false,\n    }),\n  };\n\n  static flags = {\n    ...BaseCommand.baseFlags,\n    quiet: Flags.boolean({\n      char: \"q\",\n      description: \"Suppress output, only return exit code\",\n      default: false,\n    }),\n  };\n\n  async run(): Promise<void> {\n    const { args, flags } = await this.parse(Diff);\n    const projectDir = process.cwd();\n    const homeDir = os.homedir();\n    const projectLocalPath = path.join(projectDir, LOCAL_SKILLS_PATH);\n    const globalLocalPath = path.join(homeDir, LOCAL_SKILLS_PATH);\n    const hasProject = await fileExists(projectLocalPath);\n    const hasGlobal = projectDir !== homeDir && (await fileExists(globalLocalPath));\n\n    if (!hasProject && !hasGlobal) {\n      if (!flags.quiet) {\n        this.warn(\n          `No local skills found. Run '${CLI_BIN_NAME} init' or '${CLI_BIN_NAME} edit' first.`,\n        );\n      }\n      return;\n    }\n\n    try {\n      if (!flags.quiet) {\n        this.log(\"Loading skills...\");\n      }\n\n      const { matrix, sourcePath, isLocal } = await loadSkillsMatrixFromSource({\n        sourceFlag: flags.source,\n        projectDir,\n      });\n\n      if (!flags.quiet) {\n        this.log(chalk.dim(`Loaded from ${isLocal ? \"local\" : \"remote\"}: ${sourcePath}`));\n      }\n\n      const sourceSkills: Record<string, { path: string }> = {};\n      for (const [skillId, skill] of Object.entries(matrix.skills)) {\n        if (!skill) continue;\n        if (!skill.local) {\n          sourceSkills[skillId] = { path: skill.path };\n        }\n      }\n\n      // Collect skill dirs from both project and global scopes\n      type ScopedSkillDir = { dirName: string; localSkillsPath: string };\n      const scopedDirs: ScopedSkillDir[] = [];\n      if (hasProject) {\n        for (const dirName of await listDirectories(projectLocalPath)) {\n          scopedDirs.push({ dirName, localSkillsPath: projectLocalPath });\n        }\n      }\n      if (hasGlobal) {\n        const projectDirNames = new Set(scopedDirs.map((d) => d.dirName));\n        for (const dirName of await listDirectories(globalLocalPath)) {\n          // Project-scoped takes precedence\n          if (!projectDirNames.has(dirName)) {\n            scopedDirs.push({ dirName, localSkillsPath: globalLocalPath });\n          }\n        }\n      }\n\n      if (args.skill) {\n        const filtered = scopedDirs.filter((d) => d.dirName === args.skill);\n        if (filtered.length === 0) {\n          if (!flags.quiet) {\n            this.error(`Skill '${args.skill}' not found in local skills`, {\n              exit: EXIT_CODES.ERROR,\n            });\n          }\n        }\n        scopedDirs.length = 0;\n        scopedDirs.push(...filtered);\n      }\n\n      const results: SkillDiffResult[] = [];\n      const skillsWithoutForkedFrom: string[] = [];\n\n      for (const { dirName, localSkillsPath } of scopedDirs) {\n        const result = await diffSkill(localSkillsPath, dirName, sourcePath, sourceSkills);\n        results.push(result);\n\n        if (!result.forkedFrom) {\n          skillsWithoutForkedFrom.push(dirName);\n        }\n      }\n\n      const skillsWithDiffs = results.filter((r) => r.hasDiff);\n\n      if (!flags.quiet) {\n        this.log(\"\");\n\n        if (skillsWithoutForkedFrom.length > 0) {\n          for (const skillName of skillsWithoutForkedFrom) {\n            this.warn(`Skill '${skillName}' has no forkedFrom metadata - cannot compare`);\n          }\n          this.log(\"\");\n        }\n\n        const forkedSkills = results.filter((r) => r.forkedFrom);\n\n        if (forkedSkills.length === 0) {\n          this.logInfo(\"No forked skills to compare.\");\n        } else if (skillsWithDiffs.length === 0) {\n          this.logSuccess(`All ${forkedSkills.length} forked skill(s) are up to date with source.`);\n        } else {\n          for (const result of skillsWithDiffs) {\n            this.log(\n              chalk.bold(\n                `\\n=== ${result.skillDirName} (forked from ${result.forkedFrom?.skillId}) ===\\n`,\n              ),\n            );\n            this.log(colorDiff(result.diffOutput));\n          }\n\n          this.log(\"\");\n          this.logInfo(\n            `Found differences in ${chalk.yellow(String(skillsWithDiffs.length))} skill(s).`,\n          );\n        }\n\n        this.log(\"\");\n      }\n\n      if (skillsWithDiffs.length > 0) {\n        this.exit(EXIT_CODES.ERROR);\n      }\n      this.exit(EXIT_CODES.SUCCESS);\n    } catch (error) {\n      if (!flags.quiet) {\n        const message = getErrorMessage(error);\n        this.error(`Failed to compare skills: ${message}`, {\n          exit: EXIT_CODES.ERROR,\n        });\n      } else {\n        this.exit(EXIT_CODES.ERROR);\n      }\n    }\n  }\n}\n","import ansiStyles from '#ansi-styles';\nimport supportsColor from '#supports-color';\nimport { // eslint-disable-line import/order\n\tstringReplaceAll,\n\tstringEncaseCRLFWithFirstIndex,\n} from './utilities.js';\n\nconst {stdout: stdoutColor, stderr: stderrColor} = supportsColor;\n\nconst GENERATOR = Symbol('GENERATOR');\nconst STYLER = Symbol('STYLER');\nconst IS_EMPTY = Symbol('IS_EMPTY');\n\n// `supportsColor.level` → `ansiStyles.color[name]` mapping\nconst levelMapping = [\n\t'ansi',\n\t'ansi',\n\t'ansi256',\n\t'ansi16m',\n];\n\nconst styles = Object.create(null);\n\nconst applyOptions = (object, options = {}) => {\n\tif (options.level && !(Number.isInteger(options.level) && options.level >= 0 && options.level <= 3)) {\n\t\tthrow new Error('The `level` option should be an integer from 0 to 3');\n\t}\n\n\t// Detect level if not set manually\n\tconst colorLevel = stdoutColor ? stdoutColor.level : 0;\n\tobject.level = options.level === undefined ? colorLevel : options.level;\n};\n\nexport class Chalk {\n\tconstructor(options) {\n\t\t// eslint-disable-next-line no-constructor-return\n\t\treturn chalkFactory(options);\n\t}\n}\n\nconst chalkFactory = options => {\n\tconst chalk = (...strings) => strings.join(' ');\n\tapplyOptions(chalk, options);\n\n\tObject.setPrototypeOf(chalk, createChalk.prototype);\n\n\treturn chalk;\n};\n\nfunction createChalk(options) {\n\treturn chalkFactory(options);\n}\n\nObject.setPrototypeOf(createChalk.prototype, Function.prototype);\n\nfor (const [styleName, style] of Object.entries(ansiStyles)) {\n\tstyles[styleName] = {\n\t\tget() {\n\t\t\tconst builder = createBuilder(this, createStyler(style.open, style.close, this[STYLER]), this[IS_EMPTY]);\n\t\t\tObject.defineProperty(this, styleName, {value: builder});\n\t\t\treturn builder;\n\t\t},\n\t};\n}\n\nstyles.visible = {\n\tget() {\n\t\tconst builder = createBuilder(this, this[STYLER], true);\n\t\tObject.defineProperty(this, 'visible', {value: builder});\n\t\treturn builder;\n\t},\n};\n\nconst getModelAnsi = (model, level, type, ...arguments_) => {\n\tif (model === 'rgb') {\n\t\tif (level === 'ansi16m') {\n\t\t\treturn ansiStyles[type].ansi16m(...arguments_);\n\t\t}\n\n\t\tif (level === 'ansi256') {\n\t\t\treturn ansiStyles[type].ansi256(ansiStyles.rgbToAnsi256(...arguments_));\n\t\t}\n\n\t\treturn ansiStyles[type].ansi(ansiStyles.rgbToAnsi(...arguments_));\n\t}\n\n\tif (model === 'hex') {\n\t\treturn getModelAnsi('rgb', level, type, ...ansiStyles.hexToRgb(...arguments_));\n\t}\n\n\treturn ansiStyles[type][model](...arguments_);\n};\n\nconst usedModels = ['rgb', 'hex', 'ansi256'];\n\nfor (const model of usedModels) {\n\tstyles[model] = {\n\t\tget() {\n\t\t\tconst {level} = this;\n\t\t\treturn function (...arguments_) {\n\t\t\t\tconst styler = createStyler(getModelAnsi(model, levelMapping[level], 'color', ...arguments_), ansiStyles.color.close, this[STYLER]);\n\t\t\t\treturn createBuilder(this, styler, this[IS_EMPTY]);\n\t\t\t};\n\t\t},\n\t};\n\n\tconst bgModel = 'bg' + model[0].toUpperCase() + model.slice(1);\n\tstyles[bgModel] = {\n\t\tget() {\n\t\t\tconst {level} = this;\n\t\t\treturn function (...arguments_) {\n\t\t\t\tconst styler = createStyler(getModelAnsi(model, levelMapping[level], 'bgColor', ...arguments_), ansiStyles.bgColor.close, this[STYLER]);\n\t\t\t\treturn createBuilder(this, styler, this[IS_EMPTY]);\n\t\t\t};\n\t\t},\n\t};\n}\n\nconst proto = Object.defineProperties(() => {}, {\n\t...styles,\n\tlevel: {\n\t\tenumerable: true,\n\t\tget() {\n\t\t\treturn this[GENERATOR].level;\n\t\t},\n\t\tset(level) {\n\t\t\tthis[GENERATOR].level = level;\n\t\t},\n\t},\n});\n\nconst createStyler = (open, close, parent) => {\n\tlet openAll;\n\tlet closeAll;\n\tif (parent === undefined) {\n\t\topenAll = open;\n\t\tcloseAll = close;\n\t} else {\n\t\topenAll = parent.openAll + open;\n\t\tcloseAll = close + parent.closeAll;\n\t}\n\n\treturn {\n\t\topen,\n\t\tclose,\n\t\topenAll,\n\t\tcloseAll,\n\t\tparent,\n\t};\n};\n\nconst createBuilder = (self, _styler, _isEmpty) => {\n\t// Single argument is hot path, implicit coercion is faster than anything\n\t// eslint-disable-next-line no-implicit-coercion\n\tconst builder = (...arguments_) => applyStyle(builder, (arguments_.length === 1) ? ('' + arguments_[0]) : arguments_.join(' '));\n\n\t// We alter the prototype because we must return a function, but there is\n\t// no way to create a function with a different prototype\n\tObject.setPrototypeOf(builder, proto);\n\n\tbuilder[GENERATOR] = self;\n\tbuilder[STYLER] = _styler;\n\tbuilder[IS_EMPTY] = _isEmpty;\n\n\treturn builder;\n};\n\nconst applyStyle = (self, string) => {\n\tif (self.level <= 0 || !string) {\n\t\treturn self[IS_EMPTY] ? '' : string;\n\t}\n\n\tlet styler = self[STYLER];\n\n\tif (styler === undefined) {\n\t\treturn string;\n\t}\n\n\tconst {openAll, closeAll} = styler;\n\tif (string.includes('\\u001B')) {\n\t\twhile (styler !== undefined) {\n\t\t\t// Replace any instances already present with a re-opening code\n\t\t\t// otherwise only the part of the string until said closing code\n\t\t\t// will be colored, and the rest will simply be 'plain'.\n\t\t\tstring = stringReplaceAll(string, styler.close, styler.open);\n\n\t\t\tstyler = styler.parent;\n\t\t}\n\t}\n\n\t// We can move both next actions out of loop, because remaining actions in loop won't have\n\t// any/visible effect on parts we add here. Close the styling before a linebreak and reopen\n\t// after next line to fix a bleed issue on macOS: https://github.com/chalk/chalk/pull/92\n\tconst lfIndex = string.indexOf('\\n');\n\tif (lfIndex !== -1) {\n\t\tstring = stringEncaseCRLFWithFirstIndex(string, closeAll, openAll, lfIndex);\n\t}\n\n\treturn openAll + string + closeAll;\n};\n\nObject.defineProperties(createChalk.prototype, styles);\n\nconst chalk = createChalk();\nexport const chalkStderr = createChalk({level: stderrColor ? stderrColor.level : 0});\n\nexport {\n\tmodifierNames,\n\tforegroundColorNames,\n\tbackgroundColorNames,\n\tcolorNames,\n\n\t// TODO: Remove these aliases in the next major version\n\tmodifierNames as modifiers,\n\tforegroundColorNames as foregroundColors,\n\tbackgroundColorNames as backgroundColors,\n\tcolorNames as colors,\n} from './vendor/ansi-styles/index.js';\n\nexport {\n\tstdoutColor as supportsColor,\n\tstderrColor as supportsColorStderr,\n};\n\nexport default chalk;\n","const ANSI_BACKGROUND_OFFSET = 10;\n\nconst wrapAnsi16 = (offset = 0) => code => `\\u001B[${code + offset}m`;\n\nconst wrapAnsi256 = (offset = 0) => code => `\\u001B[${38 + offset};5;${code}m`;\n\nconst wrapAnsi16m = (offset = 0) => (red, green, blue) => `\\u001B[${38 + offset};2;${red};${green};${blue}m`;\n\nconst styles = {\n\tmodifier: {\n\t\treset: [0, 0],\n\t\t// 21 isn't widely supported and 22 does the same thing\n\t\tbold: [1, 22],\n\t\tdim: [2, 22],\n\t\titalic: [3, 23],\n\t\tunderline: [4, 24],\n\t\toverline: [53, 55],\n\t\tinverse: [7, 27],\n\t\thidden: [8, 28],\n\t\tstrikethrough: [9, 29],\n\t},\n\tcolor: {\n\t\tblack: [30, 39],\n\t\tred: [31, 39],\n\t\tgreen: [32, 39],\n\t\tyellow: [33, 39],\n\t\tblue: [34, 39],\n\t\tmagenta: [35, 39],\n\t\tcyan: [36, 39],\n\t\twhite: [37, 39],\n\n\t\t// Bright color\n\t\tblackBright: [90, 39],\n\t\tgray: [90, 39], // Alias of `blackBright`\n\t\tgrey: [90, 39], // Alias of `blackBright`\n\t\tredBright: [91, 39],\n\t\tgreenBright: [92, 39],\n\t\tyellowBright: [93, 39],\n\t\tblueBright: [94, 39],\n\t\tmagentaBright: [95, 39],\n\t\tcyanBright: [96, 39],\n\t\twhiteBright: [97, 39],\n\t},\n\tbgColor: {\n\t\tbgBlack: [40, 49],\n\t\tbgRed: [41, 49],\n\t\tbgGreen: [42, 49],\n\t\tbgYellow: [43, 49],\n\t\tbgBlue: [44, 49],\n\t\tbgMagenta: [45, 49],\n\t\tbgCyan: [46, 49],\n\t\tbgWhite: [47, 49],\n\n\t\t// Bright color\n\t\tbgBlackBright: [100, 49],\n\t\tbgGray: [100, 49], // Alias of `bgBlackBright`\n\t\tbgGrey: [100, 49], // Alias of `bgBlackBright`\n\t\tbgRedBright: [101, 49],\n\t\tbgGreenBright: [102, 49],\n\t\tbgYellowBright: [103, 49],\n\t\tbgBlueBright: [104, 49],\n\t\tbgMagentaBright: [105, 49],\n\t\tbgCyanBright: [106, 49],\n\t\tbgWhiteBright: [107, 49],\n\t},\n};\n\nexport const modifierNames = Object.keys(styles.modifier);\nexport const foregroundColorNames = Object.keys(styles.color);\nexport const backgroundColorNames = Object.keys(styles.bgColor);\nexport const colorNames = [...foregroundColorNames, ...backgroundColorNames];\n\nfunction assembleStyles() {\n\tconst codes = new Map();\n\n\tfor (const [groupName, group] of Object.entries(styles)) {\n\t\tfor (const [styleName, style] of Object.entries(group)) {\n\t\t\tstyles[styleName] = {\n\t\t\t\topen: `\\u001B[${style[0]}m`,\n\t\t\t\tclose: `\\u001B[${style[1]}m`,\n\t\t\t};\n\n\t\t\tgroup[styleName] = styles[styleName];\n\n\t\t\tcodes.set(style[0], style[1]);\n\t\t}\n\n\t\tObject.defineProperty(styles, groupName, {\n\t\t\tvalue: group,\n\t\t\tenumerable: false,\n\t\t});\n\t}\n\n\tObject.defineProperty(styles, 'codes', {\n\t\tvalue: codes,\n\t\tenumerable: false,\n\t});\n\n\tstyles.color.close = '\\u001B[39m';\n\tstyles.bgColor.close = '\\u001B[49m';\n\n\tstyles.color.ansi = wrapAnsi16();\n\tstyles.color.ansi256 = wrapAnsi256();\n\tstyles.color.ansi16m = wrapAnsi16m();\n\tstyles.bgColor.ansi = wrapAnsi16(ANSI_BACKGROUND_OFFSET);\n\tstyles.bgColor.ansi256 = wrapAnsi256(ANSI_BACKGROUND_OFFSET);\n\tstyles.bgColor.ansi16m = wrapAnsi16m(ANSI_BACKGROUND_OFFSET);\n\n\t// From https://github.com/Qix-/color-convert/blob/3f0e0d4e92e235796ccb17f6e85c72094a651f49/conversions.js\n\tObject.defineProperties(styles, {\n\t\trgbToAnsi256: {\n\t\t\tvalue(red, green, blue) {\n\t\t\t\t// We use the extended greyscale palette here, with the exception of\n\t\t\t\t// black and white. normal palette only has 4 greyscale shades.\n\t\t\t\tif (red === green && green === blue) {\n\t\t\t\t\tif (red < 8) {\n\t\t\t\t\t\treturn 16;\n\t\t\t\t\t}\n\n\t\t\t\t\tif (red > 248) {\n\t\t\t\t\t\treturn 231;\n\t\t\t\t\t}\n\n\t\t\t\t\treturn Math.round(((red - 8) / 247) * 24) + 232;\n\t\t\t\t}\n\n\t\t\t\treturn 16\n\t\t\t\t\t+ (36 * Math.round(red / 255 * 5))\n\t\t\t\t\t+ (6 * Math.round(green / 255 * 5))\n\t\t\t\t\t+ Math.round(blue / 255 * 5);\n\t\t\t},\n\t\t\tenumerable: false,\n\t\t},\n\t\thexToRgb: {\n\t\t\tvalue(hex) {\n\t\t\t\tconst matches = /[a-f\\d]{6}|[a-f\\d]{3}/i.exec(hex.toString(16));\n\t\t\t\tif (!matches) {\n\t\t\t\t\treturn [0, 0, 0];\n\t\t\t\t}\n\n\t\t\t\tlet [colorString] = matches;\n\n\t\t\t\tif (colorString.length === 3) {\n\t\t\t\t\tcolorString = [...colorString].map(character => character + character).join('');\n\t\t\t\t}\n\n\t\t\t\tconst integer = Number.parseInt(colorString, 16);\n\n\t\t\t\treturn [\n\t\t\t\t\t/* eslint-disable no-bitwise */\n\t\t\t\t\t(integer >> 16) & 0xFF,\n\t\t\t\t\t(integer >> 8) & 0xFF,\n\t\t\t\t\tinteger & 0xFF,\n\t\t\t\t\t/* eslint-enable no-bitwise */\n\t\t\t\t];\n\t\t\t},\n\t\t\tenumerable: false,\n\t\t},\n\t\thexToAnsi256: {\n\t\t\tvalue: hex => styles.rgbToAnsi256(...styles.hexToRgb(hex)),\n\t\t\tenumerable: false,\n\t\t},\n\t\tansi256ToAnsi: {\n\t\t\tvalue(code) {\n\t\t\t\tif (code < 8) {\n\t\t\t\t\treturn 30 + code;\n\t\t\t\t}\n\n\t\t\t\tif (code < 16) {\n\t\t\t\t\treturn 90 + (code - 8);\n\t\t\t\t}\n\n\t\t\t\tlet red;\n\t\t\t\tlet green;\n\t\t\t\tlet blue;\n\n\t\t\t\tif (code >= 232) {\n\t\t\t\t\tred = (((code - 232) * 10) + 8) / 255;\n\t\t\t\t\tgreen = red;\n\t\t\t\t\tblue = red;\n\t\t\t\t} else {\n\t\t\t\t\tcode -= 16;\n\n\t\t\t\t\tconst remainder = code % 36;\n\n\t\t\t\t\tred = Math.floor(code / 36) / 5;\n\t\t\t\t\tgreen = Math.floor(remainder / 6) / 5;\n\t\t\t\t\tblue = (remainder % 6) / 5;\n\t\t\t\t}\n\n\t\t\t\tconst value = Math.max(red, green, blue) * 2;\n\n\t\t\t\tif (value === 0) {\n\t\t\t\t\treturn 30;\n\t\t\t\t}\n\n\t\t\t\t// eslint-disable-next-line no-bitwise\n\t\t\t\tlet result = 30 + ((Math.round(blue) << 2) | (Math.round(green) << 1) | Math.round(red));\n\n\t\t\t\tif (value === 2) {\n\t\t\t\t\tresult += 60;\n\t\t\t\t}\n\n\t\t\t\treturn result;\n\t\t\t},\n\t\t\tenumerable: false,\n\t\t},\n\t\trgbToAnsi: {\n\t\t\tvalue: (red, green, blue) => styles.ansi256ToAnsi(styles.rgbToAnsi256(red, green, blue)),\n\t\t\tenumerable: false,\n\t\t},\n\t\thexToAnsi: {\n\t\t\tvalue: hex => styles.ansi256ToAnsi(styles.hexToAnsi256(hex)),\n\t\t\tenumerable: false,\n\t\t},\n\t});\n\n\treturn styles;\n}\n\nconst ansiStyles = assembleStyles();\n\nexport default ansiStyles;\n","import process from 'node:process';\nimport os from 'node:os';\nimport tty from 'node:tty';\n\n// From: https://github.com/sindresorhus/has-flag/blob/main/index.js\n/// function hasFlag(flag, argv = globalThis.Deno?.args ?? process.argv) {\nfunction hasFlag(flag, argv = globalThis.Deno ? globalThis.Deno.args : process.argv) {\n\tconst prefix = flag.startsWith('-') ? '' : (flag.length === 1 ? '-' : '--');\n\tconst position = argv.indexOf(prefix + flag);\n\tconst terminatorPosition = argv.indexOf('--');\n\treturn position !== -1 && (terminatorPosition === -1 || position < terminatorPosition);\n}\n\nconst {env} = process;\n\nlet flagForceColor;\nif (\n\thasFlag('no-color')\n\t|| hasFlag('no-colors')\n\t|| hasFlag('color=false')\n\t|| hasFlag('color=never')\n) {\n\tflagForceColor = 0;\n} else if (\n\thasFlag('color')\n\t|| hasFlag('colors')\n\t|| hasFlag('color=true')\n\t|| hasFlag('color=always')\n) {\n\tflagForceColor = 1;\n}\n\nfunction envForceColor() {\n\tif ('FORCE_COLOR' in env) {\n\t\tif (env.FORCE_COLOR === 'true') {\n\t\t\treturn 1;\n\t\t}\n\n\t\tif (env.FORCE_COLOR === 'false') {\n\t\t\treturn 0;\n\t\t}\n\n\t\treturn env.FORCE_COLOR.length === 0 ? 1 : Math.min(Number.parseInt(env.FORCE_COLOR, 10), 3);\n\t}\n}\n\nfunction translateLevel(level) {\n\tif (level === 0) {\n\t\treturn false;\n\t}\n\n\treturn {\n\t\tlevel,\n\t\thasBasic: true,\n\t\thas256: level >= 2,\n\t\thas16m: level >= 3,\n\t};\n}\n\nfunction _supportsColor(haveStream, {streamIsTTY, sniffFlags = true} = {}) {\n\tconst noFlagForceColor = envForceColor();\n\tif (noFlagForceColor !== undefined) {\n\t\tflagForceColor = noFlagForceColor;\n\t}\n\n\tconst forceColor = sniffFlags ? flagForceColor : noFlagForceColor;\n\n\tif (forceColor === 0) {\n\t\treturn 0;\n\t}\n\n\tif (sniffFlags) {\n\t\tif (hasFlag('color=16m')\n\t\t\t|| hasFlag('color=full')\n\t\t\t|| hasFlag('color=truecolor')) {\n\t\t\treturn 3;\n\t\t}\n\n\t\tif (hasFlag('color=256')) {\n\t\t\treturn 2;\n\t\t}\n\t}\n\n\t// Check for Azure DevOps pipelines.\n\t// Has to be above the `!streamIsTTY` check.\n\tif ('TF_BUILD' in env && 'AGENT_NAME' in env) {\n\t\treturn 1;\n\t}\n\n\tif (haveStream && !streamIsTTY && forceColor === undefined) {\n\t\treturn 0;\n\t}\n\n\tconst min = forceColor || 0;\n\n\tif (env.TERM === 'dumb') {\n\t\treturn min;\n\t}\n\n\tif (process.platform === 'win32') {\n\t\t// Windows 10 build 10586 is the first Windows release that supports 256 colors.\n\t\t// Windows 10 build 14931 is the first release that supports 16m/TrueColor.\n\t\tconst osRelease = os.release().split('.');\n\t\tif (\n\t\t\tNumber(osRelease[0]) >= 10\n\t\t\t&& Number(osRelease[2]) >= 10_586\n\t\t) {\n\t\t\treturn Number(osRelease[2]) >= 14_931 ? 3 : 2;\n\t\t}\n\n\t\treturn 1;\n\t}\n\n\tif ('CI' in env) {\n\t\tif (['GITHUB_ACTIONS', 'GITEA_ACTIONS', 'CIRCLECI'].some(key => key in env)) {\n\t\t\treturn 3;\n\t\t}\n\n\t\tif (['TRAVIS', 'APPVEYOR', 'GITLAB_CI', 'BUILDKITE', 'DRONE'].some(sign => sign in env) || env.CI_NAME === 'codeship') {\n\t\t\treturn 1;\n\t\t}\n\n\t\treturn min;\n\t}\n\n\tif ('TEAMCITY_VERSION' in env) {\n\t\treturn /^(9\\.(0*[1-9]\\d*)\\.|\\d{2,}\\.)/.test(env.TEAMCITY_VERSION) ? 1 : 0;\n\t}\n\n\tif (env.COLORTERM === 'truecolor') {\n\t\treturn 3;\n\t}\n\n\tif (env.TERM === 'xterm-kitty') {\n\t\treturn 3;\n\t}\n\n\tif (env.TERM === 'xterm-ghostty') {\n\t\treturn 3;\n\t}\n\n\tif (env.TERM === 'wezterm') {\n\t\treturn 3;\n\t}\n\n\tif ('TERM_PROGRAM' in env) {\n\t\tconst version = Number.parseInt((env.TERM_PROGRAM_VERSION || '').split('.')[0], 10);\n\n\t\tswitch (env.TERM_PROGRAM) {\n\t\t\tcase 'iTerm.app': {\n\t\t\t\treturn version >= 3 ? 3 : 2;\n\t\t\t}\n\n\t\t\tcase 'Apple_Terminal': {\n\t\t\t\treturn 2;\n\t\t\t}\n\t\t\t// No default\n\t\t}\n\t}\n\n\tif (/-256(color)?$/i.test(env.TERM)) {\n\t\treturn 2;\n\t}\n\n\tif (/^screen|^xterm|^vt100|^vt220|^rxvt|color|ansi|cygwin|linux/i.test(env.TERM)) {\n\t\treturn 1;\n\t}\n\n\tif ('COLORTERM' in env) {\n\t\treturn 1;\n\t}\n\n\treturn min;\n}\n\nexport function createSupportsColor(stream, options = {}) {\n\tconst level = _supportsColor(stream, {\n\t\tstreamIsTTY: stream && stream.isTTY,\n\t\t...options,\n\t});\n\n\treturn translateLevel(level);\n}\n\nconst supportsColor = {\n\tstdout: createSupportsColor({isTTY: tty.isatty(1)}),\n\tstderr: createSupportsColor({isTTY: tty.isatty(2)}),\n};\n\nexport default supportsColor;\n","// TODO: When targeting Node.js 16, use `String.prototype.replaceAll`.\nexport function stringReplaceAll(string, substring, replacer) {\n\tlet index = string.indexOf(substring);\n\tif (index === -1) {\n\t\treturn string;\n\t}\n\n\tconst substringLength = substring.length;\n\tlet endIndex = 0;\n\tlet returnValue = '';\n\tdo {\n\t\treturnValue += string.slice(endIndex, index) + substring + replacer;\n\t\tendIndex = index + substringLength;\n\t\tindex = string.indexOf(substring, endIndex);\n\t} while (index !== -1);\n\n\treturnValue += string.slice(endIndex);\n\treturn returnValue;\n}\n\nexport function stringEncaseCRLFWithFirstIndex(string, prefix, postfix, index) {\n\tlet endIndex = 0;\n\tlet returnValue = '';\n\tdo {\n\t\tconst gotCR = string[index - 1] === '\\r';\n\t\treturnValue += string.slice(endIndex, (gotCR ? index - 1 : index)) + prefix + (gotCR ? 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+{"version":3,"sources":["../../src/cli/commands/diff.ts"],"sourcesContent":["import { Args, Flags } from \"@oclif/core\";\nimport chalk from \"chalk\";\nimport { BaseCommand } from \"../base-command.js\";\nimport { getErrorMessage } from \"../utils/errors.js\";\nimport {\n  loadSource,\n  buildSourceSkillsMap,\n  collectScopedSkillDirs,\n  generateSkillDiff,\n  formatColoredDiff,\n  type SkillDiffResult,\n} from \"../lib/operations/index.js\";\nimport { EXIT_CODES } from \"../lib/exit-codes.js\";\nimport { CLI_BIN_NAME } from \"../consts.js\";\n\nexport default class Diff extends BaseCommand {\n  static summary = \"Show differences between local forked skills and their source versions\";\n  static description =\n    \"Compare local forked skills with their source versions and display differences using unified diff format with colored output\";\n\n  static examples = [\n    {\n      description: \"Show diffs for all forked skills\",\n      command: \"<%= config.bin %> <%= command.id %>\",\n    },\n    {\n      description: \"Show diff for a specific skill\",\n      command: \"<%= config.bin %> <%= command.id %> my-skill\",\n    },\n    {\n      description: \"Check for diffs without output (exit code only)\",\n      command: \"<%= config.bin %> <%= command.id %> --quiet\",\n    },\n  ];\n\n  static args = {\n    skill: Args.string({\n      description: \"Show diff for specific skill only\",\n      required: false,\n    }),\n  };\n\n  static flags = {\n    ...BaseCommand.baseFlags,\n    quiet: Flags.boolean({\n      char: \"q\",\n      description: \"Suppress output, only return exit code\",\n      default: false,\n    }),\n  };\n\n  async run(): Promise<void> {\n    const { args, flags } = await this.parse(Diff);\n    const projectDir = process.cwd();\n    const { dirs: scopedDirs, hasProject, hasGlobal } = await collectScopedSkillDirs(projectDir);\n\n    if (!hasProject && !hasGlobal) {\n      if (!flags.quiet) {\n        this.warn(\n          `No local skills found. Run '${CLI_BIN_NAME} init' or '${CLI_BIN_NAME} edit' first.`,\n        );\n      }\n      return;\n    }\n\n    try {\n      if (!flags.quiet) {\n        this.log(\"Loading skills...\");\n      }\n\n      const { sourceResult } = await loadSource({\n        sourceFlag: flags.source,\n        projectDir,\n      });\n      const { matrix, sourcePath, isLocal } = sourceResult;\n\n      if (!flags.quiet) {\n        this.log(chalk.dim(`Loaded from ${isLocal ? \"local\" : \"remote\"}: ${sourcePath}`));\n      }\n\n      const sourceSkills = buildSourceSkillsMap(matrix);\n\n      let filteredDirs = scopedDirs;\n      if (args.skill) {\n        filteredDirs = scopedDirs.filter((d) => d.dirName === args.skill);\n        if (filteredDirs.length === 0) {\n          if (!flags.quiet) {\n            this.error(`Skill '${args.skill}' not found in local skills`, {\n              exit: EXIT_CODES.ERROR,\n            });\n          }\n        }\n      }\n\n      const results: SkillDiffResult[] = [];\n      const skillsWithoutForkedFrom: string[] = [];\n\n      for (const { dirName, localSkillsPath } of filteredDirs) {\n        const result = await generateSkillDiff(localSkillsPath, dirName, sourcePath, sourceSkills);\n        results.push(result);\n\n        if (!result.forkedFrom) {\n          skillsWithoutForkedFrom.push(dirName);\n        }\n      }\n\n      const skillsWithDiffs = results.filter((r) => r.hasDiff);\n\n      if (!flags.quiet) {\n        this.log(\"\");\n\n        if (skillsWithoutForkedFrom.length > 0) {\n          for (const skillName of skillsWithoutForkedFrom) {\n            this.warn(`Skill '${skillName}' has no forkedFrom metadata - cannot compare`);\n          }\n          this.log(\"\");\n        }\n\n        const forkedSkills = results.filter((r) => r.forkedFrom);\n\n        if (forkedSkills.length === 0) {\n          this.logInfo(\"No forked skills to compare.\");\n        } else if (skillsWithDiffs.length === 0) {\n          this.logSuccess(`All ${forkedSkills.length} forked skill(s) are up to date with source.`);\n        } else {\n          for (const result of skillsWithDiffs) {\n            this.log(\n              chalk.bold(\n                `\\n=== ${result.skillDirName} (forked from ${result.forkedFrom?.skillId}) ===\\n`,\n              ),\n            );\n            this.log(formatColoredDiff(result.diffOutput));\n          }\n\n          this.log(\"\");\n          this.logInfo(\n            `Found differences in ${chalk.yellow(String(skillsWithDiffs.length))} skill(s).`,\n          );\n        }\n\n        this.log(\"\");\n      }\n\n      if (skillsWithDiffs.length > 0) {\n        this.exit(EXIT_CODES.ERROR);\n      }\n      this.exit(EXIT_CODES.SUCCESS);\n    } catch (error) {\n      if (!flags.quiet) {\n        const message = getErrorMessage(error);\n        this.error(`Failed to compare skills: ${message}`, {\n          exit: EXIT_CODES.ERROR,\n        });\n      } else {\n        this.exit(EXIT_CODES.ERROR);\n      }\n    }\n  }\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA;AAAA,SAAS,MAAM,aAAa;AAe5B,IAAqB,OAArB,MAAqB,cAAa,YAAY;AAAA,EAC5C,OAAO,UAAU;AAAA,EACjB,OAAO,cACL;AAAA,EAEF,OAAO,WAAW;AAAA,IAChB;AAAA,MACE,aAAa;AAAA,MACb,SAAS;AAAA,IACX;AAAA,IACA;AAAA,MACE,aAAa;AAAA,MACb,SAAS;AAAA,IACX;AAAA,IACA;AAAA,MACE,aAAa;AAAA,MACb,SAAS;AAAA,IACX;AAAA,EACF;AAAA,EAEA,OAAO,OAAO;AAAA,IACZ,OAAO,KAAK,OAAO;AAAA,MACjB,aAAa;AAAA,MACb,UAAU;AAAA,IACZ,CAAC;AAAA,EACH;AAAA,EAEA,OAAO,QAAQ;AAAA,IACb,GAAG,YAAY;AAAA,IACf,OAAO,MAAM,QAAQ;AAAA,MACnB,MAAM;AAAA,MACN,aAAa;AAAA,MACb,SAAS;AAAA,IACX,CAAC;AAAA,EACH;AAAA,EAEA,MAAM,MAAqB;AACzB,UAAM,EAAE,MAAM,MAAM,IAAI,MAAM,KAAK,MAAM,KAAI;AAC7C,UAAM,aAAa,QAAQ,IAAI;AAC/B,UAAM,EAAE,MAAM,YAAY,YAAY,UAAU,IAAI,MAAM,uBAAuB,UAAU;AAE3F,QAAI,CAAC,cAAc,CAAC,WAAW;AAC7B,UAAI,CAAC,MAAM,OAAO;AAChB,aAAK;AAAA,UACH,+BAA+B,YAAY,cAAc,YAAY;AAAA,QACvE;AAAA,MACF;AACA;AAAA,IACF;AAEA,QAAI;AACF,UAAI,CAAC,MAAM,OAAO;AAChB,aAAK,IAAI,mBAAmB;AAAA,MAC9B;AAEA,YAAM,EAAE,aAAa,IAAI,MAAM,WAAW;AAAA,QACxC,YAAY,MAAM;AAAA,QAClB;AAAA,MACF,CAAC;AACD,YAAM,EAAE,QAAQ,YAAY,QAAQ,IAAI;AAExC,UAAI,CAAC,MAAM,OAAO;AAChB,aAAK,IAAI,eAAM,IAAI,eAAe,UAAU,UAAU,QAAQ,KAAK,UAAU,EAAE,CAAC;AAAA,MAClF;AAEA,YAAM,eAAe,qBAAqB,MAAM;AAEhD,UAAI,eAAe;AACnB,UAAI,KAAK,OAAO;AACd,uBAAe,WAAW,OAAO,CAAC,MAAM,EAAE,YAAY,KAAK,KAAK;AAChE,YAAI,aAAa,WAAW,GAAG;AAC7B,cAAI,CAAC,MAAM,OAAO;AAChB,iBAAK,MAAM,UAAU,KAAK,KAAK,+BAA+B;AAAA,cAC5D,MAAM,WAAW;AAAA,YACnB,CAAC;AAAA,UACH;AAAA,QACF;AAAA,MACF;AAEA,YAAM,UAA6B,CAAC;AACpC,YAAM,0BAAoC,CAAC;AAE3C,iBAAW,EAAE,SAAS,gBAAgB,KAAK,cAAc;AACvD,cAAM,SAAS,MAAM,kBAAkB,iBAAiB,SAAS,YAAY,YAAY;AACzF,gBAAQ,KAAK,MAAM;AAEnB,YAAI,CAAC,OAAO,YAAY;AACtB,kCAAwB,KAAK,OAAO;AAAA,QACtC;AAAA,MACF;AAEA,YAAM,kBAAkB,QAAQ,OAAO,CAAC,MAAM,EAAE,OAAO;AAEvD,UAAI,CAAC,MAAM,OAAO;AAChB,aAAK,IAAI,EAAE;AAEX,YAAI,wBAAwB,SAAS,GAAG;AACtC,qBAAW,aAAa,yBAAyB;AAC/C,iBAAK,KAAK,UAAU,SAAS,+CAA+C;AAAA,UAC9E;AACA,eAAK,IAAI,EAAE;AAAA,QACb;AAEA,cAAM,eAAe,QAAQ,OAAO,CAAC,MAAM,EAAE,UAAU;AAEvD,YAAI,aAAa,WAAW,GAAG;AAC7B,eAAK,QAAQ,8BAA8B;AAAA,QAC7C,WAAW,gBAAgB,WAAW,GAAG;AACvC,eAAK,WAAW,OAAO,aAAa,MAAM,8CAA8C;AAAA,QAC1F,OAAO;AACL,qBAAW,UAAU,iBAAiB;AACpC,iBAAK;AAAA,cACH,eAAM;AAAA,gBACJ;AAAA,MAAS,OAAO,YAAY,iBAAiB,OAAO,YAAY,OAAO;AAAA;AAAA,cACzE;AAAA,YACF;AACA,iBAAK,IAAI,kBAAkB,OAAO,UAAU,CAAC;AAAA,UAC/C;AAEA,eAAK,IAAI,EAAE;AACX,eAAK;AAAA,YACH,wBAAwB,eAAM,OAAO,OAAO,gBAAgB,MAAM,CAAC,CAAC;AAAA,UACtE;AAAA,QACF;AAEA,aAAK,IAAI,EAAE;AAAA,MACb;AAEA,UAAI,gBAAgB,SAAS,GAAG;AAC9B,aAAK,KAAK,WAAW,KAAK;AAAA,MAC5B;AACA,WAAK,KAAK,WAAW,OAAO;AAAA,IAC9B,SAAS,OAAO;AACd,UAAI,CAAC,MAAM,OAAO;AAChB,cAAM,UAAU,gBAAgB,KAAK;AACrC,aAAK,MAAM,6BAA6B,OAAO,IAAI;AAAA,UACjD,MAAM,WAAW;AAAA,QACnB,CAAC;AAAA,MACH,OAAO;AACL,aAAK,KAAK,WAAW,KAAK;AAAA,MAC5B;AAAA,IACF;AAAA,EACF;AACF;","names":[]}

package/dist/commands/doctor.js

@@ -1,26 +1,32 @@
 #!/usr/bin/env node
+import {
+  detectProject,
+  loadSource
+} from "../chunk-DCVCFBQ7.js";
+import "../chunk-N6A7A4RA.js";
+import "../chunk-O5ZWS26C.js";
+import "../chunk-XQK4S22C.js";
+import "../chunk-FBZR46GC.js";
 import {
   discoverLocalSkills,
   getStackSkillIds,
-  loadProjectConfig,
-  loadSkillsMatrixFromSource,
   validateProjectConfig
-} from "../chunk-FKXD3EXJ.js";
-import "../chunk-YJ2URWF7.js";
+} from "../chunk-TMTUTUEV.js";
+import "../chunk-B6MYECV6.js";
 import {
   matrix
 } from "../chunk-ANXHMG32.js";
 import {
   BaseCommand,
   EXIT_CODES
-} from "../chunk-LMR7VAP3.js";
+} from "../chunk-MMTMXLI4.js";
 import {
   directoryExists,
   fileExists,
   getErrorMessage,
   glob,
   setVerbose
-} from "../chunk-WJKD6EGK.js";
+} from "../chunk-NUU3U43A.js";
 import "../chunk-6XWHJHNZ.js";
 import {
   CLAUDE_DIR,
@@ -39,33 +45,44 @@ init_esm_shims();
 import { Flags } from "@oclif/core";
 import os from "os";
 import path from "path";
-async function checkConfigValid(projectDir) {
-  const loaded = await loadProjectConfig(projectDir);
-  if (!loaded) {
+function checkConfigValid(config) {
+  if (!config) {
     return {
-      status: "fail",
-      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} not found`,
-      details: [`Run '${CLI_BIN_NAME} init' to create a configuration`]
+      result: {
+        status: "fail",
+        message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} not found`,
+        details: [`Run '${CLI_BIN_NAME} init' to create a configuration`]
+      },
+      config: null
     };
   }
-  const validation = validateProjectConfig(loaded.config);
+  const validation = validateProjectConfig(config);
   if (!validation.valid) {
     return {
-      status: "fail",
-      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has errors`,
-      details: validation.errors
+      result: {
+        status: "fail",
+        message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has errors`,
+        details: validation.errors
+      },
+      config: null
     };
   }
   if (validation.warnings.length > 0) {
     return {
-      status: "warn",
-      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has warnings`,
-      details: validation.warnings
+      result: {
+        status: "warn",
+        message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has warnings`,
+        details: validation.warnings
+      },
+      config
     };
   }
   return {
-    status: "pass",
-    message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} is valid`
+    result: {
+      status: "pass",
+      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} is valid`
+    },
+    config
   };
 }
 async function checkSkillsResolved(config, matrix2, projectDir) {
@@ -168,7 +185,7 @@ async function checkNoOrphans(config, projectDir) {
 }
 async function checkSourceReachable(sourceFlag, projectDir) {
   try {
-    const result = await loadSkillsMatrixFromSource({
+    const { sourceResult: result } = await loadSource({
       sourceFlag,
       projectDir
     });
@@ -304,14 +321,10 @@ var Doctor = class _Doctor extends BaseCommand {
     this.log("  Checking configuration health...");
     this.log("");
     const results = [];
-    const configResult = await checkConfigValid(projectDir);
+    const detected = await detectProject(projectDir);
+    const { result: configResult, config } = checkConfigValid(detected?.config ?? null);
     results.push(configResult);
     formatCheckLine("Config Valid", configResult, flags.verbose).forEach((line) => this.log(line));
-    let config = null;
-    if (configResult.status !== "fail") {
-      const loaded = await loadProjectConfig(projectDir);
-      config = loaded?.config ?? null;
-    }
     const sourceResult = await checkSourceReachable(flags.source, projectDir);
     if (config) {
       const skillsResult = await checkSkillsResolved(config, matrix, projectDir);

package/dist/commands/doctor.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/commands/doctor.ts"],"sourcesContent":["import { Flags } from \"@oclif/core\";\nimport os from \"os\";\nimport path from \"path\";\nimport { BaseCommand } from \"../base-command\";\nimport { getErrorMessage } from \"../utils/errors\";\nimport { EXIT_CODES } from \"../lib/exit-codes\";\nimport { loadProjectConfig, validateProjectConfig } from \"../lib/configuration\";\nimport { loadSkillsMatrixFromSource } from \"../lib/loading\";\nimport { matrix } from \"../lib/matrix/matrix-provider\";\nimport { discoverLocalSkills } from \"../lib/skills\";\nimport { getStackSkillIds } from \"../lib/stacks\";\nimport type { AgentName, MergedSkillsMatrix, ProjectConfig, SkillId } from \"../types\";\nimport { fileExists, glob, directoryExists } from \"../utils/fs\";\nimport {\n  CLAUDE_DIR,\n  CLAUDE_SRC_DIR,\n  CLI_BIN_NAME,\n  DEFAULT_BRANDING,\n  STANDARD_FILES,\n} from \"../consts\";\nimport { setVerbose } from \"../utils/logger\";\n\ntype CheckResult = {\n  status: \"pass\" | \"fail\" | \"warn\" | \"skip\";\n  message: string;\n  details?: string[];\n};\n\nasync function checkConfigValid(projectDir: string): Promise<CheckResult> {\n  const loaded = await loadProjectConfig(projectDir);\n\n  if (!loaded) {\n    return {\n      status: \"fail\",\n      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} not found`,\n      details: [`Run '${CLI_BIN_NAME} init' to create a configuration`],\n    };\n  }\n\n  const validation = validateProjectConfig(loaded.config);\n\n  if (!validation.valid) {\n    return {\n      status: \"fail\",\n      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has errors`,\n      details: validation.errors,\n    };\n  }\n\n  if (validation.warnings.length > 0) {\n    return {\n      status: \"warn\",\n      message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} has warnings`,\n      details: validation.warnings,\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: `${CLAUDE_SRC_DIR}/${STANDARD_FILES.CONFIG_TS} is valid`,\n  };\n}\n\nasync function checkSkillsResolved(\n  config: ProjectConfig,\n  matrix: MergedSkillsMatrix,\n  projectDir: string,\n): Promise<CheckResult> {\n  const uniqueSkills = config.stack ? getStackSkillIds(config.stack) : [];\n\n  if (uniqueSkills.length === 0) {\n    return {\n      status: \"pass\",\n      message: \"No skills configured\",\n    };\n  }\n\n  const localResult = await discoverLocalSkills(projectDir);\n  const globalResult = projectDir !== os.homedir() ? await discoverLocalSkills(os.homedir()) : null;\n  const localSkillIds = new Set([\n    ...(localResult?.skills.map((s) => s.id) ?? []),\n    ...(globalResult?.skills.map((s) => s.id) ?? []),\n  ]);\n\n  const missingSkills: string[] = [];\n  for (const skillId of uniqueSkills) {\n    const inMatrix = skillId in matrix.skills;\n    const inLocal = localSkillIds.has(skillId);\n    if (!inMatrix && !inLocal) {\n      missingSkills.push(skillId);\n    }\n  }\n\n  if (missingSkills.length > 0) {\n    return {\n      status: \"fail\",\n      message: `${uniqueSkills.length - missingSkills.length}/${uniqueSkills.length} skills found`,\n      details: missingSkills.map((s) => `- ${s} (not found)`),\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: `${uniqueSkills.length}/${uniqueSkills.length} skills found`,\n  };\n}\n\nasync function checkAgentsCompiled(\n  config: ProjectConfig,\n  projectDir: string,\n): Promise<CheckResult> {\n  const agents = config.agents ?? [];\n\n  if (agents.length === 0) {\n    return {\n      status: \"pass\",\n      message: \"No agents configured\",\n    };\n  }\n\n  const projectAgentsDir = path.join(projectDir, CLAUDE_DIR, \"agents\");\n  const globalAgentsDir = path.join(os.homedir(), CLAUDE_DIR, \"agents\");\n  const missingAgents: string[] = [];\n\n  for (const agent of agents) {\n    // Check scope-appropriate directory for the agent\n    const agentsDir = agent.scope === \"global\" ? globalAgentsDir : projectAgentsDir;\n    const agentPath = path.join(agentsDir, `${agent.name}.md`);\n    if (!(await fileExists(agentPath))) {\n      missingAgents.push(agent.name);\n    }\n  }\n\n  if (missingAgents.length > 0) {\n    return {\n      status: \"warn\",\n      message: `${missingAgents.length} agent${missingAgents.length === 1 ? \"\" : \"s\"} need${missingAgents.length === 1 ? \"s\" : \"\"} recompilation`,\n      details: missingAgents.map((a) => `- ${a} (missing)`),\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: `${agents.length}/${agents.length} agents compiled`,\n  };\n}\n\nasync function checkNoOrphans(config: ProjectConfig, projectDir: string): Promise<CheckResult> {\n  const projectAgentsDir = path.join(projectDir, CLAUDE_DIR, \"agents\");\n  const globalAgentsDir = path.join(os.homedir(), CLAUDE_DIR, \"agents\");\n\n  const projectExists = await directoryExists(projectAgentsDir);\n  const globalExists = projectDir !== os.homedir() && (await directoryExists(globalAgentsDir));\n\n  if (!projectExists && !globalExists) {\n    return {\n      status: \"pass\",\n      message: \"No agents directory\",\n    };\n  }\n\n  const projectMdFiles = projectExists ? await glob(\"*.md\", projectAgentsDir) : [];\n  const globalMdFiles = globalExists ? await glob(\"*.md\", globalAgentsDir) : [];\n  const mdFiles = [...new Set([...projectMdFiles, ...globalMdFiles])];\n  const configAgentNames: Set<string> = new Set((config.agents ?? []).map((a) => a.name));\n\n  const orphanedFiles: string[] = [];\n  for (const file of mdFiles) {\n    const agentName = file.replace(/\\.md$/, \"\");\n    if (!configAgentNames.has(agentName)) {\n      orphanedFiles.push(agentName);\n    }\n  }\n\n  if (orphanedFiles.length > 0) {\n    return {\n      status: \"warn\",\n      message: `${orphanedFiles.length} orphaned agent file${orphanedFiles.length === 1 ? \"\" : \"s\"}`,\n      details: orphanedFiles.map((f) => `- ${f}.md (not in config)`),\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: \"No orphaned agent files\",\n  };\n}\n\nasync function checkSourceReachable(\n  sourceFlag: string | undefined,\n  projectDir: string,\n): Promise<CheckResult> {\n  try {\n    const result = await loadSkillsMatrixFromSource({\n      sourceFlag,\n      projectDir,\n    });\n\n    const skillCount = Object.keys(matrix.skills).length;\n    const sourceLabel = result.isLocal ? \"local\" : \"remote\";\n\n    return {\n      status: \"pass\",\n      message: `Connected to ${sourceLabel}: ${result.sourcePath}`,\n      details: [`${skillCount} skills available`],\n    };\n  } catch (error) {\n    const message = getErrorMessage(error);\n    return {\n      status: \"fail\",\n      message: \"Failed to load source\",\n      details: [message],\n    };\n  }\n}\n\nconst CHECK_WIDTH = 20;\n\nfunction formatCheckName(name: string): string {\n  return name.padEnd(CHECK_WIDTH);\n}\n\nfunction formatStatus(status: CheckResult[\"status\"]): string {\n  switch (status) {\n    case \"pass\":\n      return \"\\u2713\"; // ✓\n    case \"fail\":\n      return \"\\u2717\"; // ✗\n    case \"warn\":\n      return \"!\";\n    case \"skip\":\n      return \"-\";\n    default:\n      return \"?\";\n  }\n}\n\nfunction formatCheckLine(name: string, result: CheckResult, verbose: boolean): string[] {\n  const statusIcon = formatStatus(result.status);\n  const nameFormatted = formatCheckName(name);\n  const lines: string[] = [];\n\n  lines.push(`  ${nameFormatted}${statusIcon}  ${result.message}`);\n\n  const shouldShowDetails =\n    result.details &&\n    result.details.length > 0 &&\n    (verbose || result.status === \"fail\" || result.status === \"warn\");\n\n  if (shouldShowDetails) {\n    for (const detail of result.details!) {\n      lines.push(`  ${\" \".repeat(CHECK_WIDTH)}   ${detail}`);\n    }\n  }\n\n  return lines;\n}\n\nfunction formatSummary(results: CheckResult[]): string {\n  let passed = 0;\n  let warnings = 0;\n  let errors = 0;\n\n  for (const result of results) {\n    switch (result.status) {\n      case \"pass\":\n        passed++;\n        break;\n      case \"warn\":\n        warnings++;\n        break;\n      case \"fail\":\n        errors++;\n        break;\n      // skip doesn't count\n      default:\n        break;\n    }\n  }\n\n  const parts: string[] = [];\n  parts.push(`${passed} passed`);\n\n  if (warnings > 0) {\n    parts.push(`${warnings} warning${warnings === 1 ? \"\" : \"s\"}`);\n  } else {\n    parts.push(`0 warnings`);\n  }\n\n  if (errors > 0) {\n    parts.push(`${errors} error${errors === 1 ? \"\" : \"s\"}`);\n  } else {\n    parts.push(`0 errors`);\n  }\n\n  return `  Summary: ${parts.join(\", \")}`;\n}\n\nfunction formatTips(results: CheckResult[]): string[] {\n  const hasAgentWarning = results.some(\n    (r) => r.status === \"warn\" && r.message.includes(\"recompilation\"),\n  );\n  const hasConfigError = results.some((r) => r.status === \"fail\" && r.message.includes(\"config\"));\n  const hasSkillError = results.some(\n    (r) => r.status === \"fail\" && r.message.includes(\"skills found\"),\n  );\n\n  const tips: string[] = [];\n\n  if (hasAgentWarning) {\n    tips.push(`  Tip: Run '${CLI_BIN_NAME} compile' to generate missing agent files`);\n  }\n  if (hasConfigError) {\n    tips.push(`  Tip: Run '${CLI_BIN_NAME} init' to create or fix configuration`);\n  }\n  if (hasSkillError) {\n    tips.push(\"  Tip: Check skill IDs in config match available skills\");\n  }\n\n  return tips;\n}\n\nexport default class Doctor extends BaseCommand {\n  static summary = \"Diagnose common configuration issues\";\n\n  static description = `Run diagnostic checks on your ${DEFAULT_BRANDING.NAME} configuration to identify issues with config validity, skill resolution, agent compilation, and source connectivity.`;\n\n  static examples = [\n    \"<%= config.bin %> <%= command.id %>\",\n    \"<%= config.bin %> <%= command.id %> --verbose\",\n    \"<%= config.bin %> <%= command.id %> --source /path/to/marketplace\",\n  ];\n\n  static flags = {\n    source: Flags.string({\n      char: \"s\",\n      description: \"Skills source path or URL\",\n    }),\n    verbose: Flags.boolean({\n      char: \"v\",\n      description: \"Show detailed output\",\n      default: false,\n    }),\n  };\n\n  async run(): Promise<void> {\n    const { flags } = await this.parse(Doctor);\n\n    setVerbose(flags.verbose);\n\n    const projectDir = process.cwd();\n\n    this.log(\"\");\n    this.log(`${DEFAULT_BRANDING.NAME} Doctor`);\n    this.log(\"\");\n    this.log(\"  Checking configuration health...\");\n    this.log(\"\");\n\n    const results: CheckResult[] = [];\n\n    const configResult = await checkConfigValid(projectDir);\n    results.push(configResult);\n    formatCheckLine(\"Config Valid\", configResult, flags.verbose).forEach((line) => this.log(line));\n\n    let config: ProjectConfig | null = null;\n\n    if (configResult.status !== \"fail\") {\n      const loaded = await loadProjectConfig(projectDir);\n      config = loaded?.config ?? null;\n    }\n\n    const sourceResult = await checkSourceReachable(flags.source, projectDir);\n\n    // loadSkillsMatrixFromSource (called by checkSourceReachable) populates the matrix automatically\n    if (config) {\n      const skillsResult = await checkSkillsResolved(config, matrix, projectDir);\n      results.push(skillsResult);\n      formatCheckLine(\"Skills Resolved\", skillsResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    } else {\n      const skipResult: CheckResult = {\n        status: \"skip\",\n        message: \"Skipped (config invalid)\",\n      };\n      results.push(skipResult);\n      formatCheckLine(\"Skills Resolved\", skipResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    }\n\n    if (config) {\n      const agentsResult = await checkAgentsCompiled(config, projectDir);\n      results.push(agentsResult);\n      formatCheckLine(\"Agents Compiled\", agentsResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    } else {\n      const skipResult: CheckResult = {\n        status: \"skip\",\n        message: \"Skipped (config invalid)\",\n      };\n      results.push(skipResult);\n      formatCheckLine(\"Agents Compiled\", skipResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    }\n\n    if (config) {\n      const orphansResult = await checkNoOrphans(config, projectDir);\n      results.push(orphansResult);\n      formatCheckLine(\"No Orphans\", orphansResult, flags.verbose).forEach((line) => this.log(line));\n    } else {\n      const skipResult: CheckResult = {\n        status: \"skip\",\n        message: \"Skipped (config invalid)\",\n      };\n      results.push(skipResult);\n      formatCheckLine(\"No Orphans\", skipResult, flags.verbose).forEach((line) => this.log(line));\n    }\n\n    results.push(sourceResult);\n    formatCheckLine(\"Source Reachable\", sourceResult, flags.verbose).forEach((line) =>\n      this.log(line),\n    );\n\n    this.log(\"\");\n    this.log(formatSummary(results));\n\n    const tips = formatTips(results);\n    if (tips.length > 0) {\n      this.log(\"\");\n      tips.forEach((tip) => this.log(tip));\n    }\n\n    this.log(\"\");\n\n    const hasErrors = results.some((r) => r.status === \"fail\");\n    if (hasErrors) {\n      this.exit(EXIT_CODES.ERROR);\n    }\n  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[]),\n    ...(globalResult?.skills.map((s) => s.id) ?? []),\n  ]);\n\n  const missingSkills: string[] = [];\n  for (const skillId of uniqueSkills) {\n    const inMatrix = skillId in matrix.skills;\n    const inLocal = localSkillIds.has(skillId);\n    if (!inMatrix && !inLocal) {\n      missingSkills.push(skillId);\n    }\n  }\n\n  if (missingSkills.length > 0) {\n    return {\n      status: \"fail\",\n      message: `${uniqueSkills.length - missingSkills.length}/${uniqueSkills.length} skills found`,\n      details: missingSkills.map((s) => `- ${s} (not found)`),\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: `${uniqueSkills.length}/${uniqueSkills.length} skills found`,\n  };\n}\n\nasync function checkAgentsCompiled(\n  config: ProjectConfig,\n  projectDir: string,\n): Promise<CheckResult> {\n  const agents = config.agents ?? 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[]).map((a) => a.name));\n\n  const orphanedFiles: string[] = [];\n  for (const file of mdFiles) {\n    const agentName = file.replace(/\\.md$/, \"\");\n    if (!configAgentNames.has(agentName)) {\n      orphanedFiles.push(agentName);\n    }\n  }\n\n  if (orphanedFiles.length > 0) {\n    return {\n      status: \"warn\",\n      message: `${orphanedFiles.length} orphaned agent file${orphanedFiles.length === 1 ? \"\" : \"s\"}`,\n      details: orphanedFiles.map((f) => `- ${f}.md (not in config)`),\n    };\n  }\n\n  return {\n    status: \"pass\",\n    message: \"No orphaned agent files\",\n  };\n}\n\nasync function checkSourceReachable(\n  sourceFlag: string | undefined,\n  projectDir: string,\n): Promise<CheckResult> {\n  try {\n    const { sourceResult: result } = await loadSource({\n      sourceFlag,\n      projectDir,\n    });\n\n    const skillCount = Object.keys(matrix.skills).length;\n    const sourceLabel = result.isLocal ? \"local\" : \"remote\";\n\n    return {\n      status: \"pass\",\n      message: `Connected to ${sourceLabel}: ${result.sourcePath}`,\n      details: [`${skillCount} skills available`],\n    };\n  } catch (error) {\n    const message = getErrorMessage(error);\n    return {\n      status: \"fail\",\n      message: \"Failed to load source\",\n      details: [message],\n    };\n  }\n}\n\nconst CHECK_WIDTH = 20;\n\nfunction formatCheckName(name: string): string {\n  return name.padEnd(CHECK_WIDTH);\n}\n\nfunction formatStatus(status: CheckResult[\"status\"]): string {\n  switch (status) {\n    case \"pass\":\n      return \"\\u2713\"; // ✓\n    case \"fail\":\n      return \"\\u2717\"; // ✗\n    case \"warn\":\n      return \"!\";\n    case \"skip\":\n      return \"-\";\n    default:\n      return \"?\";\n  }\n}\n\nfunction formatCheckLine(name: string, result: CheckResult, verbose: boolean): string[] {\n  const statusIcon = formatStatus(result.status);\n  const nameFormatted = formatCheckName(name);\n  const lines: string[] = [];\n\n  lines.push(`  ${nameFormatted}${statusIcon}  ${result.message}`);\n\n  const shouldShowDetails =\n    result.details &&\n    result.details.length > 0 &&\n    (verbose || result.status === \"fail\" || result.status === \"warn\");\n\n  if (shouldShowDetails) {\n    for (const detail of result.details!) {\n      lines.push(`  ${\" \".repeat(CHECK_WIDTH)}   ${detail}`);\n    }\n  }\n\n  return lines;\n}\n\nfunction formatSummary(results: CheckResult[]): string {\n  let passed = 0;\n  let warnings = 0;\n  let errors = 0;\n\n  for (const result of results) {\n    switch (result.status) {\n      case \"pass\":\n        passed++;\n        break;\n      case \"warn\":\n        warnings++;\n        break;\n      case \"fail\":\n        errors++;\n        break;\n      // skip doesn't count\n      default:\n        break;\n    }\n  }\n\n  const parts: string[] = [];\n  parts.push(`${passed} passed`);\n\n  if (warnings > 0) {\n    parts.push(`${warnings} warning${warnings === 1 ? \"\" : \"s\"}`);\n  } else {\n    parts.push(`0 warnings`);\n  }\n\n  if (errors > 0) {\n    parts.push(`${errors} error${errors === 1 ? \"\" : \"s\"}`);\n  } else {\n    parts.push(`0 errors`);\n  }\n\n  return `  Summary: ${parts.join(\", \")}`;\n}\n\nfunction formatTips(results: CheckResult[]): string[] {\n  const hasAgentWarning = results.some(\n    (r) => r.status === \"warn\" && r.message.includes(\"recompilation\"),\n  );\n  const hasConfigError = results.some((r) => r.status === \"fail\" && r.message.includes(\"config\"));\n  const hasSkillError = results.some(\n    (r) => r.status === \"fail\" && r.message.includes(\"skills found\"),\n  );\n\n  const tips: string[] = [];\n\n  if (hasAgentWarning) {\n    tips.push(`  Tip: Run '${CLI_BIN_NAME} compile' to generate missing agent files`);\n  }\n  if (hasConfigError) {\n    tips.push(`  Tip: Run '${CLI_BIN_NAME} init' to create or fix configuration`);\n  }\n  if (hasSkillError) {\n    tips.push(\"  Tip: Check skill IDs in config match available skills\");\n  }\n\n  return tips;\n}\n\nexport default class Doctor extends BaseCommand {\n  static summary = \"Diagnose common configuration issues\";\n\n  static description = `Run diagnostic checks on your ${DEFAULT_BRANDING.NAME} configuration to identify issues with config validity, skill resolution, agent compilation, and source connectivity.`;\n\n  static examples = [\n    \"<%= config.bin %> <%= command.id %>\",\n    \"<%= config.bin %> <%= command.id %> --verbose\",\n    \"<%= config.bin %> <%= command.id %> --source /path/to/marketplace\",\n  ];\n\n  static flags = {\n    source: Flags.string({\n      char: \"s\",\n      description: \"Skills source path or URL\",\n    }),\n    verbose: Flags.boolean({\n      char: \"v\",\n      description: \"Show detailed output\",\n      default: false,\n    }),\n  };\n\n  async run(): Promise<void> {\n    const { flags } = await this.parse(Doctor);\n\n    setVerbose(flags.verbose);\n\n    const projectDir = process.cwd();\n\n    this.log(\"\");\n    this.log(`${DEFAULT_BRANDING.NAME} Doctor`);\n    this.log(\"\");\n    this.log(\"  Checking configuration health...\");\n    this.log(\"\");\n\n    const results: CheckResult[] = [];\n\n    // Use detectProject operation to get installation + config in one call\n    const detected = await detectProject(projectDir);\n    const { result: configResult, config } = checkConfigValid(detected?.config ?? null);\n    results.push(configResult);\n    formatCheckLine(\"Config Valid\", configResult, flags.verbose).forEach((line) => this.log(line));\n\n    const sourceResult = await checkSourceReachable(flags.source, projectDir);\n\n    // loadSource (called by checkSourceReachable) populates the matrix automatically\n    if (config) {\n      const skillsResult = await checkSkillsResolved(config, matrix, projectDir);\n      results.push(skillsResult);\n      formatCheckLine(\"Skills Resolved\", skillsResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    } else {\n      const skipResult: CheckResult = {\n        status: \"skip\",\n        message: \"Skipped (config invalid)\",\n      };\n      results.push(skipResult);\n      formatCheckLine(\"Skills Resolved\", skipResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    }\n\n    if (config) {\n      const agentsResult = await checkAgentsCompiled(config, projectDir);\n      results.push(agentsResult);\n      formatCheckLine(\"Agents Compiled\", agentsResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    } else {\n      const skipResult: CheckResult = {\n        status: \"skip\",\n        message: \"Skipped (config invalid)\",\n      };\n      results.push(skipResult);\n      formatCheckLine(\"Agents Compiled\", skipResult, flags.verbose).forEach((line) =>\n        this.log(line),\n      );\n    }\n\n    if (config) {\n      const orphansResult = await checkNoOrphans(config, projectDir);\n      results.push(orphansResult);\n      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