@aeolus-fleet/trierarch 0.20.4 → 0.21.0

package/dist/adapters/run-command.js

@@ -36,4 +36,34 @@ export function runCommand(command, options) {
         });
     });
 }
+/**
+ * Runs a program, no shell, writing each whole line it prints as it prints
+ * it, until it ends or `signal` stops it. For a program that runs until it is
+ * stopped, as `journalctl --follow`.
+ */
+export function streamCommand(command, options) {
+    return new Promise((resolve, reject) => {
+        const child = spawn(command, [...options.args], { stdio: ['ignore', 'pipe', 'inherit'], signal: options.signal });
+        let partial = '';
+        child.stdout.on('data', (chunk) => {
+            const lines = (partial + chunk.toString('utf8')).split('\n');
+            partial = lines.pop() ?? '';
+            for (const line of lines) {
+                if (options.signal.aborted) {
+                    return;
+                }
+                options.write(line);
+            }
+        });
+        // Stopped is how a followed program ends: no failure.
+        child.on('error', (error) => {
+            if (!options.signal.aborted) {
+                reject(error);
+            }
+        });
+        child.on('close', () => {
+            resolve();
+        });
+    });
+}
 //# sourceMappingURL=run-command.js.map

package/dist/adapters/run-command.js.map

@@ -1 +1 @@
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+{"version":3,"file":"run-command.js","sourceRoot":"","sources":["../../src/adapters/run-command.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,MAAM,oBAAoB,CAAC;AAS3C;;;;GAIG;AACH,MAAM,UAAU,UAAU,CAAC,OAAe,EAAE,OAA8H;IACxK,OAAO,IAAI,OAAO,CAAC,CAAC,OAAO,EAAE,MAAM,EAAE,EAAE;QACrC,MAAM,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC;QAC1B,kHAAkH;QAClH,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,EAAE,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC,EAAE,EAAE,GAAG,EAAE,EAAE,GAAG,OAAO,CAAC,GAAG,EAAE,GAAG,OAAO,CAAC,GAAG,EAAE,EAAE,GAAG,EAAE,OAAO,CAAC,GAAG,EAAE,KAAK,EAAE,CAAC,KAAK,KAAK,SAAS,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,MAAM,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,GAAG,CAAC,OAAO,CAAC,SAAS,KAAK,SAAS,IAAI,EAAE,OAAO,EAAE,OAAO,CAAC,SAAS,EAAE,CAAC,EAAE,CAAC,CAAC;QACzP,IAAI,KAAK,KAAK,SAAS,EAAE,CAAC;YACxB,2FAA2F;YAC3F,KAAK,CAAC,KAAK,EAAE,EAAE,CAAC,OAAO,EAAE,GAAG,EAAE,CAAC,SAAS,CAAC,CAAC;YAC1C,KAAK,CAAC,KAAK,EAAE,GAAG,CAAC,KAAK,CAAC,CAAC;QAC1B,CAAC;QACD,IAAI,MAAM,GAAG,EAAE,CAAC;QAChB,IAAI,MAAM,GAAG,EAAE,CAAC;QAChB,KAAK,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,EAAE,CAAC,KAAa,EAAE,EAAE;YACzC,MAAM,IAAI,KAAK,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QACnC,CAAC,CAAC,CAAC;QACH,KAAK,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,EAAE,CAAC,KAAa,EAAE,EAAE;YACzC,MAAM,IAAI,KAAK,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QACnC,CAAC,CAAC,CAAC;QACH,KAAK,CAAC,EAAE,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC;QAC1B,iGAAiG;QACjG,KAAK,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE;YAChC,IAAI,MAAM,KAAK,IAAI,EAAE,CAAC;gBACpB,KAAK,CAAC,MAAM,EAAE,OAAO,EAAE,CAAC;gBACxB,KAAK,CAAC,MAAM,EAAE,OAAO,EAAE,CAAC;gBACxB,OAAO,CAAC,EAAE,MAAM,EAAE,IAAI,IAAI,CAAC,EAAE,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;YACjD,CAAC;QACH,CAAC,CAAC,CAAC;QACH,KAAK,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,IAAI,EAAE,EAAE;YACzB,OAAO,CAAC,EAAE,MAAM,EAAE,IAAI,IAAI,CAAC,EAAE,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;QACjD,CAAC,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;AACL,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,aAAa,CAAC,OAAe,EAAE,OAAwF;IACrI,OAAO,IAAI,OAAO,CAAC,CAAC,OAAO,EAAE,MAAM,EAAE,EAAE;QACrC,MAAM,KAAK,GAAG,KAAK,CAAC,OAAO,EAAE,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC,EAAE,EAAE,KAAK,EAAE,CAAC,QAAQ,EAAE,MAAM,EAAE,SAAS,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC;QAClH,IAAI,OAAO,GAAG,EAAE,CAAC;QACjB,KAAK,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,KAAa,EAAE,EAAE;YACxC,MAAM,KAAK,GAAG,CAAC,OAAO,GAAG,KAAK,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;YAC7D,OAAO,GAAG,KAAK,CAAC,GAAG,EAAE,IAAI,EAAE,CAAC;YAC5B,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE,CAAC;gBACzB,IAAI,OAAO,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;oBAC3B,OAAO;gBACT,CAAC;gBACD,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;YACtB,CAAC;QACH,CAAC,CAAC,CAAC;QACH,sDAAsD;QACtD,KAAK,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,KAAK,EAAE,EAAE;YAC1B,IAAI,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;gBAC5B,MAAM,CAAC,KAAK,CAAC,CAAC;YAChB,CAAC;QACH,CAAC,CAAC,CAAC;QACH,KAAK,CAAC,EAAE,CAAC,OAAO,EAAE,GAAG,EAAE;YACrB,OAAO,EAAE,CAAC;QACZ,CAAC,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;AACL,CAAC"}

package/dist/adapters/service.d.ts

@@ -26,6 +26,10 @@ export interface ServiceStatus {
 export interface Service {
     /** Writes the service's file without loading it. */
     write(): Promise<void>;
+    /** Writes the service's file over an installed one, for its next start, leaving the running trierarch and its sessions alone. */
+    rewrite(): Promise<void>;
+    /** Makes the supervisor read the service's file again, as written by this or another version, without restarting the trierarch. */
+    reload(): Promise<void>;
     /** Writes the service's file, then loads and starts it. */
     install(): Promise<void>;
     /** Stops the service and removes its file. */

package/dist/adapters/service.js

@@ -10,7 +10,7 @@ import { join } from 'node:path';
 export const LAUNCHD_LABEL = 'dev.aeolus-fleet.trierarch';
 export const SYSTEMD_UNIT = 'aeolus-trierarch.service';
 /** The variables the trierarch itself reads, carried into the service when set where install ran. */
-const TRIERARCH_VARIABLES = ['AEOLUS_PLUGIN_ROOT', 'AEOLUS_PLUGIN_DATA', 'AEOLUS_CODEX_PLUGIN_ROOT', 'AEOLUS_CODEX_PLUGIN_DATA', 'CODEX_HOME', 'AEOLUS_TRIERARCH_CONFIG'];
+const TRIERARCH_VARIABLES = ['AEOLUS_PLUGIN_ROOT', 'AEOLUS_PLUGIN_DATA', 'AEOLUS_CODEX_PLUGIN_ROOT', 'AEOLUS_CODEX_PLUGIN_DATA', 'CODEX_HOME', 'CLAUDE_CONFIG_DIR', 'AEOLUS_TRIERARCH_CONFIG'];
 const DEFAULT_PATH = '/usr/bin:/bin';
 /** The service's environment: PATH, so it finds tmux, git, claude and codex, and the trierarch's own variables. */
 export function serviceEnvironment(env) {
@@ -69,6 +69,8 @@ ExecStart="${at.run.node}" "${at.run.script}" run
 ${variables}
 Restart=always
 RestartSec=5
+# The sessions run in the tmux server the trierarch starts, in this unit's control group: a stop ends the trierarch only (#479).
+KillMode=process
 
 [Install]
 WantedBy=default.target
@@ -147,6 +149,9 @@ export function createService(options) {
         };
         return {
             write,
+            // launchd reads the file when it loads the agent again; the trierarch's own stop and start do.
+            rewrite: write,
+            reload: () => Promise.resolve(),
             install: async () => {
                 await write();
                 // Unload an earlier copy first: bootstrap refuses a loaded agent.
@@ -187,8 +192,17 @@ export function createService(options) {
             await mkdir(folder, { recursive: true });
             await writeFile(file, systemdUnit({ run, environment }));
         };
+        // A reload, not a restart: systemd stops and starts the unit as the new file says from then on.
+        const reload = async () => {
+            await systemctl('daemon-reload');
+        };
         return {
             write,
+            rewrite: async () => {
+                await write();
+                await reload();
+            },
+            reload,
             install: async () => {
                 await write();
                 await systemctl('daemon-reload');
@@ -222,6 +236,6 @@ export function createService(options) {
         };
     }
     const elsewhere = () => Promise.reject(new Error(`aeolus-trierarch knows launchd (macOS) and systemd (Linux), not ${platform}: run aeolus-trierarch run under your own supervisor`));
-    return { write: elsewhere, install: elsewhere, uninstall: elsewhere, start: elsewhere, stop: elsewhere, restart: elsewhere, status: elsewhere };
+    return { write: elsewhere, rewrite: elsewhere, reload: elsewhere, install: elsewhere, uninstall: elsewhere, start: elsewhere, stop: elsewhere, restart: elsewhere, status: elsewhere };
 }
 //# sourceMappingURL=service.js.map

package/dist/adapters/service.js.map

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package/dist/adapters/trust.d.ts

@@ -2,13 +2,16 @@ import type { TrierarchConfiguration } from '@aeolus-fleet/common';
 import type { TrustPort } from '../core/ports.js';
 /**
  * What each configured harness trusts, read from its own files each time
- * (#381): Claude Code's ~/.claude.json, Codex's config.toml. A repository is
+ * (#381): Claude Code's .claude.json, Codex's config.toml. A repository is
  * trusted when its own checkout is, as both ask about a worktree's
  * repository; a folder when its path is. A harness with no reader trusts
- * nothing.
+ * nothing. Claude Code's skip-permissions flag is unaccepted until bypass
+ * permissions mode is accepted in its settings (#403); Codex asks about no
+ * flag.
  */
 export declare function createTrust(at: {
     configuration: TrierarchConfiguration;
     homeDirectory: string;
     env: Readonly<Record<string, string | undefined>>;
+    managedSettings: string;
 }): TrustPort;

package/dist/adapters/trust.js

@@ -1,18 +1,25 @@
+import { SKIP_PERMISSIONS } from './claude-code.js';
 import { createClaudeCodeSetup } from './claude-code-setup.js';
 import { codexTrustedFolders } from './codex-setup.js';
 /**
  * What each configured harness trusts, read from its own files each time
- * (#381): Claude Code's ~/.claude.json, Codex's config.toml. A repository is
+ * (#381): Claude Code's .claude.json, Codex's config.toml. A repository is
  * trusted when its own checkout is, as both ask about a worktree's
  * repository; a folder when its path is. A harness with no reader trusts
- * nothing.
+ * nothing. Claude Code's skip-permissions flag is unaccepted until bypass
+ * permissions mode is accepted in its settings (#403); Codex asks about no
+ * flag.
  */
 export function createTrust(at) {
-    const { configuration, homeDirectory, env } = at;
+    const { configuration, homeDirectory, env, managedSettings } = at;
+    const claudeCode = createClaudeCodeSetup({ homeDirectory, managedSettings, ...(env.CLAUDE_CONFIG_DIR !== undefined && { configDirectory: env.CLAUDE_CONFIG_DIR }) });
     const readers = {
-        'claude-code': () => createClaudeCodeSetup({ homeDirectory }).trustedFolders(),
+        'claude-code': () => claudeCode.trustedFolders(),
         codex: () => codexTrustedFolders({ homeDirectory, env }),
     };
+    const unaccepted = {
+        'claude-code': async () => ((await claudeCode.isSkipPermissionsAccepted()) ? [] : [SKIP_PERMISSIONS]),
+    };
     const namesIn = (places, trusted) => Object.entries(places)
         .filter(([, place]) => trusted.has(place.path))
         .map(([name]) => name);
@@ -20,7 +27,8 @@ export function createTrust(at) {
         trusted: async () => {
             const entries = await Promise.all(Object.keys(configuration.harnesses).map(async (harness) => {
                 const trusted = (await readers[harness]?.()) ?? new Set();
-                return [harness, { repositories: namesIn(configuration.repositories, trusted), folders: namesIn(configuration.folders, trusted) }];
+                const unacceptedFlags = (await unaccepted[harness]?.()) ?? [];
+                return [harness, { repositories: namesIn(configuration.repositories, trusted), folders: namesIn(configuration.folders, trusted), unacceptedFlags }];
             }));
             return Object.fromEntries(entries);
         },

package/dist/adapters/trust.js.map

@@ -1 +1 @@
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+{"version":3,"file":"trust.js","sourceRoot":"","sources":["../../src/adapters/trust.ts"],"names":[],"mappings":"AAGA,OAAO,EAAE,gBAAgB,EAAE,MAAM,kBAAkB,CAAC;AACpD,OAAO,EAAE,qBAAqB,EAAE,MAAM,wBAAwB,CAAC;AAC/D,OAAO,EAAE,mBAAmB,EAAE,MAAM,kBAAkB,CAAC;AAEvD;;;;;;;;GAQG;AACH,MAAM,UAAU,WAAW,CAAC,EAAgJ;IAC1K,MAAM,EAAE,aAAa,EAAE,aAAa,EAAE,GAAG,EAAE,eAAe,EAAE,GAAG,EAAE,CAAC;IAClE,MAAM,UAAU,GAAG,qBAAqB,CAAC,EAAE,aAAa,EAAE,eAAe,EAAE,GAAG,CAAC,GAAG,CAAC,iBAAiB,KAAK,SAAS,IAAI,EAAE,eAAe,EAAE,GAAG,CAAC,iBAAiB,EAAE,CAAC,EAAE,CAAC,CAAC;IACrK,MAAM,OAAO,GAA+E;QAC1F,aAAa,EAAE,GAAG,EAAE,CAAC,UAAU,CAAC,cAAc,EAAE;QAChD,KAAK,EAAE,GAAG,EAAE,CAAC,mBAAmB,CAAC,EAAE,aAAa,EAAE,GAAG,EAAE,CAAC;KACzD,CAAC;IACF,MAAM,UAAU,GAA6E;QAC3F,aAAa,EAAE,KAAK,IAAI,EAAE,CAAC,CAAC,CAAC,MAAM,UAAU,CAAC,yBAAyB,EAAE,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,gBAAgB,CAAC,CAAC;KACtG,CAAC;IACF,MAAM,OAAO,GAAG,CAAC,MAA8C,EAAE,OAA4B,EAAY,EAAE,CACzG,MAAM,CAAC,OAAO,CAAC,MAAM,CAAC;SACnB,MAAM,CAAC,CAAC,CAAC,EAAE,KAAK,CAAC,EAAE,EAAE,CAAC,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;SAC9C,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,EAAE,EAAE,CAAC,IAAI,CAAC,CAAC;IAE3B,OAAO;QACL,OAAO,EAAE,KAAK,IAA4B,EAAE;YAC1C,MAAM,OAAO,GAAG,MAAM,OAAO,CAAC,GAAG,CAC/B,MAAM,CAAC,IAAI,CAAC,aAAa,CAAC,SAAS,CAAC,CAAC,GAAG,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;gBACzD,MAAM,OAAO,GAAG,CAAC,MAAM,OAAO,CAAC,OAAO,CAAC,EAAE,EAAE,CAAC,IAAI,IAAI,GAAG,EAAU,CAAC;gBAClE,MAAM,eAAe,GAAG,CAAC,MAAM,UAAU,CAAC,OAAO,CAAC,EAAE,EAAE,CAAC,IAAI,EAAE,CAAC;gBAC9D,OAAO,CAAC,OAAO,EAAE,EAAE,YAAY,EAAE,OAAO,CAAC,aAAa,CAAC,YAAY,EAAE,OAAO,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,aAAa,CAAC,OAAO,EAAE,OAAO,CAAC,EAAE,eAAe,EAAE,CAAU,CAAC;YAC/J,CAAC,CAAC,CACH,CAAC;YACF,OAAO,MAAM,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC;QACrC,CAAC;KACF,CAAC;AACJ,CAAC"}

package/dist/bin/aeolus-trierarch.js

@@ -3,8 +3,9 @@
  * `aeolus-trierarch`: runs a trierarch on this machine (docs/trierarch.md).
  * See `main.ts` for its commands.
  */
+import { CLAUDE_CODE_MANAGED_SETTINGS } from '../adapters/claude-code-setup.js';
 import { main } from '../cli/main.js';
-const outcome = await main(process.argv.slice(2));
+const outcome = await main(process.argv.slice(2), { env: process.env, managedSettings: CLAUDE_CODE_MANAGED_SETTINGS, platform: process.platform });
 if (outcome.output !== '') {
     process.stdout.write(`${outcome.output}\n`);
 }

package/dist/bin/aeolus-trierarch.js.map

@@ -1 +1 @@
-{"version":3,"file":"aeolus-trierarch.js","sourceRoot":"","sources":["../../src/bin/aeolus-trierarch.ts"],"names":[],"mappings":";AACA;;;GAGG;AACH,OAAO,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAEtC,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;AAClD,IAAI,OAAO,CAAC,MAAM,KAAK,EAAE,EAAE,CAAC;IAC1B,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,GAAG,OAAO,CAAC,MAAM,IAAI,CAAC,CAAC;AAC9C,CAAC;AACD,OAAO,CAAC,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC"}
+{"version":3,"file":"aeolus-trierarch.js","sourceRoot":"","sources":["../../src/bin/aeolus-trierarch.ts"],"names":[],"mappings":";AACA;;;GAGG;AACH,OAAO,EAAE,4BAA4B,EAAE,MAAM,kCAAkC,CAAC;AAChF,OAAO,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAEtC,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,EAAE,GAAG,EAAE,OAAO,CAAC,GAAG,EAAE,eAAe,EAAE,4BAA4B,EAAE,QAAQ,EAAE,OAAO,CAAC,QAAQ,EAAE,CAAC,CAAC;AACnJ,IAAI,OAAO,CAAC,MAAM,KAAK,EAAE,EAAE,CAAC;IAC1B,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,GAAG,OAAO,CAAC,MAAM,IAAI,CAAC,CAAC;AAC9C,CAAC;AACD,OAAO,CAAC,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC"}

package/dist/cli/config-check.d.ts

@@ -1,4 +1,5 @@
 import { type CommandPart } from '../adapters/command-line.js';
+import { type HarnessFiles } from '../adapters/harnesses.js';
 import type { AdapterFlag } from '../core/ports.js';
 import type { TrierarchPaths } from '../adapters/paths.js';
 /** `aeolus-trierarch config check`: checks the configuration and gives the effective command per harness. */
@@ -18,4 +19,4 @@ export interface ConfigCheckReport {
     }>>;
     readonly text: string;
 }
-export declare function configCheck(paths: TrierarchPaths): Promise<ConfigCheckReport>;
+export declare function configCheck(paths: TrierarchPaths, files: HarnessFiles): Promise<ConfigCheckReport>;

package/dist/cli/config-check.js

@@ -1,10 +1,11 @@
 import { describeCommandLine } from '../adapters/command-line.js';
 import { createDetectedFile } from '../adapters/detected-file.js';
 import { loadConfiguration, TrierarchFileError } from '../adapters/files.js';
-import { describeFlags, effectiveFlags } from '../adapters/flags.js';
+import { describeFlags } from '../adapters/flags.js';
+import { effectiveFlags } from '../core/effective-flags.js';
 import { adapterFlagsOf, commandLinesOf } from '../adapters/harnesses.js';
 import { modelOptionsIgnored, withDetectedOptions } from '../core/detected-options.js';
-export async function configCheck(paths) {
+export async function configCheck(paths, files) {
     const configured = await loadConfiguration(paths.config);
     const [withModel, ...more] = modelOptionsIgnored(configured);
     if (withModel !== undefined) {
@@ -12,9 +13,10 @@ export async function configCheck(paths) {
         throw new TrierarchFileError(`The configuration at ${paths.config} sets a model option for ${[withModel, ...more].join(', ')}: model ids come from detection only (#382), so remove it; aeolus-trierarch detect lists them`);
     }
     // The detected options too (#365), as the running trierarch has them.
-    const configuration = withDetectedOptions(configured, await createDetectedFile(paths.detected).load());
+    const detected = await createDetectedFile(paths.detected).load();
+    const configuration = withDetectedOptions(configured, detected);
     const adapterFlags = adapterFlagsOf(configuration);
-    const harnesses = Object.fromEntries(Object.entries(configuration.harnesses).map(([name, harness]) => {
+    const harnesses = Object.fromEntries(await Promise.all(Object.entries(configuration.harnesses).map(async ([name, harness]) => {
         const flags = effectiveFlags(harness, {});
         return [
             name,
@@ -22,10 +24,10 @@ export async function configCheck(paths) {
                 flags,
                 options: Object.fromEntries(Object.entries(harness.options).map(([option, settings]) => [option, settings.values])),
                 adapterFlags: adapterFlags[name] ?? [],
-                ...commandLinesOf(name, flags),
+                ...(await commandLinesOf({ harness: name, flags, files, permissionModes: detected[name]?.permissionModes })),
             },
         ];
-    }));
+    })));
     const commands = Object.entries(harnesses).map(([name, harness]) => harness.firstStart === undefined || harness.restart === undefined
         ? `${name}: this trierarch has no adapter for it`
         : [`${name}:`, `  first start: ${describeCommandLine(harness.firstStart)}`, `  restart: ${describeCommandLine(harness.restart)}`].join('\n'));

package/dist/cli/config-check.js.map

@@ -1 +1 @@
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package/dist/cli/init.d.ts

@@ -11,7 +11,7 @@ import type { Prompter } from './prompter.js';
  * `aeolus-trierarch init`: the whole setup of a machine, asking for what is
  * missing. It registers the trierarch's own ship (commissioned by the
  * trierarch plugin, with crew:run) and keeps its crew token, never the secret; writes the
- * configuration from the operator's answers; answers Claude Code's one-time
+ * configuration from the operator's answers; answers the offered harnesses' one-time
  * questions ahead, so a session nobody watches never waits on one; and offers
  * to install and start the service. On a machine set up already it says so,
  * never registers again, and offers to change the configuration.
@@ -29,7 +29,7 @@ export interface InitReport {
     readonly fleetUrl: string;
     readonly shipId?: ShipId;
     readonly configuration: 'written' | 'changed' | 'kept';
-    /** The places Claude Code now trusts: the worktree root, then each configured repository and folder. */
+    /** The places Claude Code now trusts, when the configuration offers it: the worktree root, then each configured repository and folder. */
     readonly trusted: readonly string[];
     readonly isSkipPermissionsAccepted: boolean;
     /** The repositories and folders Codex now trusts, when the configuration offers Codex. */
@@ -51,7 +51,7 @@ export declare function initTrierarch(input: {
     isCodexInstalled: boolean;
     /** Detects the configured harnesses' options (#365), once per harness version. */
     detect: DetectHarnesses;
-    service: Pick<Service, 'install' | 'restart' | 'status'>;
+    service: Pick<Service, 'install' | 'rewrite' | 'restart' | 'status'>;
     /** What running.json says now: the started process writes it as it starts (#402). */
     running: () => Promise<RunningFile | undefined>;
     /** Waits between reads of running.json; a test passes one that does not wait. */

package/dist/cli/init.js

@@ -223,39 +223,17 @@ export async function initTrierarch(input) {
     if (Object.keys(configuration.repositories).length === 0 && Object.keys(configuration.folders).length === 0) {
         said.push('It has no repository or folder yet, so it can crew no request: run aeolus-trierarch init again to add one.');
     }
-    // Claude Code's one-time questions, answered ahead.
     const root = configuration.worktreeRoot ?? paths.worktrees;
     await mkdir(root, { recursive: true });
-    const repositories = Object.values(configuration.repositories).map((repository) => repository.path);
-    const folders = Object.values(configuration.folders).map((folder) => folder.path);
-    // Adding a place through init is what trusts it (#381); every run, so a place added since is trusted too.
-    for (const place of [root, ...repositories, ...folders]) {
-        await claudeCode.trust(place);
-    }
-    said.push(`Claude Code trusts ${root}, so a session in any worktree starts with no trust question.`);
-    if (repositories.length > 0) {
-        said.push(`Claude Code trusts each configured repository too, as it asks about a worktree's repository: ${repositories.join(', ')}.`);
-    }
-    if (folders.length > 0) {
-        said.push(`Claude Code trusts each configured folder too: ${folders.join(', ')}.`);
-    }
-    let isSkipPermissionsAccepted = await claudeCode.isSkipPermissionsAccepted();
-    if (configuration.harnesses[CLAUDE_CODE]?.flags.includes(SKIP_PERMISSIONS) === true && !isSkipPermissionsAccepted) {
-        if (await prompter.confirm('Claude Code asks once per user to accept bypass permissions mode. Accept it now (skipDangerousModePermissionPrompt in ~/.claude/settings.json)?', { isDefault: true })) {
-            await claudeCode.acceptSkipPermissions();
-            isSkipPermissionsAccepted = true;
-            said.push('Claude Code accepts bypass permissions mode for you.');
-        }
-        else {
-            said.push(`Claude Code still asks to accept bypass permissions mode, and a session started with ${SKIP_PERMISSIONS} waits on that question until you answer it.`);
-        }
-    }
+    const claude = await setUpClaudeCode({ configuration, claudeCode, prompter, root });
+    said.push(...claude.said);
     const codex = await setUpCodex({ configuration, codex: input.codex, root });
     said.push(...codex.said);
     // What each harness offers, detected on this machine and kept apart from the configuration (#365).
     const harnesses = Object.keys(configuration.harnesses);
     said.push(...describeDetected({ harnesses, detected: await input.detect({ harnesses, by: 'start' }) }).split('\n'));
-    // The service: offered when it is not installed, restarted when it should read a new configuration.
+    // The service: offered when it is not installed, rewritten as this trierarch writes it when it is (#479),
+    // and restarted when it should read a new configuration.
     prompter.step('The service');
     let serviced = 'unchanged';
     const status = await service.status();
@@ -269,23 +247,69 @@ export async function initTrierarch(input) {
             said.push('Install and start it later with aeolus-trierarch install.');
         }
     }
-    else if (configured !== 'kept' && (await prompter.confirm('Restart the trierarch so it reads the new configuration?', { isDefault: true }))) {
-        await startNew(() => service.restart(), 'The trierarch restarted with the new configuration.');
-        serviced = 'restarted';
+    else {
+        await service.rewrite();
+        if (configured !== 'kept' && (await prompter.confirm('Restart the trierarch so it reads the new configuration?', { isDefault: true }))) {
+            await startNew(() => service.restart(), 'The trierarch restarted with the new configuration.');
+            serviced = 'restarted';
+        }
     }
     return {
         isSetUpAlready: crew !== undefined,
         fleetUrl,
         ...(shipId !== undefined && { shipId }),
         configuration: configured,
-        trusted: [root, ...repositories, ...folders],
-        isSkipPermissionsAccepted,
+        trusted: claude.trusted,
+        isSkipPermissionsAccepted: claude.isSkipPermissionsAccepted,
         codexTrusted: codex.trusted,
         codexHooksTrusted: codex.hooksTrusted,
         service: serviced,
         said,
     };
 }
+/**
+ * Claude Code's one-time questions, answered ahead on every run where the
+ * configuration offers Claude Code: the worktree root and each repository and
+ * folder trusted (adding a place through init is what trusts it, #381, so a
+ * place added since is trusted too), its onboarding completed, and bypass
+ * permissions mode offered when its sessions skip permissions. Where the
+ * configuration does not offer it, its files stay untouched.
+ */
+async function setUpClaudeCode(at) {
+    const { configuration, claudeCode, prompter, root } = at;
+    const harness = configuration.harnesses[CLAUDE_CODE];
+    if (harness === undefined) {
+        return { trusted: [], isSkipPermissionsAccepted: false, said: [] };
+    }
+    const said = [];
+    const repositories = Object.values(configuration.repositories).map((repository) => repository.path);
+    const folders = Object.values(configuration.folders).map((folder) => folder.path);
+    for (const place of [root, ...repositories, ...folders]) {
+        await claudeCode.trust(place);
+    }
+    said.push(`Claude Code trusts ${root}, so a session in any worktree starts with no trust question.`);
+    if (repositories.length > 0) {
+        said.push(`Claude Code trusts each configured repository too, as it asks about a worktree's repository: ${repositories.join(', ')}.`);
+    }
+    if (folders.length > 0) {
+        said.push(`Claude Code trusts each configured folder too: ${folders.join(', ')}.`);
+    }
+    // Its onboarding is no consent, only its first-run screens, so it is completed without asking (#403).
+    await claudeCode.completeOnboarding();
+    said.push(`Claude Code's onboarding is complete (hasCompletedOnboarding in ${claudeCode.files.claudeJson}), so a session on this machine shows no first-run screen.`);
+    let isSkipPermissionsAccepted = await claudeCode.isSkipPermissionsAccepted();
+    if (harness.flags.includes(SKIP_PERMISSIONS) && !isSkipPermissionsAccepted) {
+        if (await prompter.confirm(`Claude Code asks once per user to accept bypass permissions mode. Accept it now (skipDangerousModePermissionPrompt in ${claudeCode.files.settings})?`, { isDefault: true })) {
+            await claudeCode.acceptSkipPermissions();
+            isSkipPermissionsAccepted = true;
+            said.push(`Claude Code accepts bypass permissions mode for you (skipDangerousModePermissionPrompt in ${claudeCode.files.settings}).`);
+        }
+        else {
+            said.push(`Claude Code still asks to accept bypass permissions mode, and a session started with ${SKIP_PERMISSIONS} waits on that question until you answer it.`);
+        }
+    }
+    return { trusted: [root, ...repositories, ...folders], isSkipPermissionsAccepted, said };
+}
 /**
  * Codex's one-time questions, answered ahead on every run where the
  * configuration offers Codex: each repository and folder trusted (a folder

package/dist/cli/init.js.map

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package/dist/cli/logs.d.ts

@@ -1,7 +1,9 @@
+import { type Exec } from '../adapters/service.js';
 /**
  * `aeolus-trierarch logs`: the last lines of the trierarch's log, and with
- * `--follow` each line written after, until it is stopped. The log is the file
- * the service writes, `~/.aeolus/trierarch/logs/trierarch.log`.
+ * `--follow` each line written after, until it is stopped. The log is where
+ * the service writes it: `~/.aeolus/trierarch/logs/trierarch.log` on macOS,
+ * the journal on Linux.
  */
 export declare function tailLog(at: {
     file: string;
@@ -14,3 +16,36 @@ export declare function followLog(at: {
     intervalMs: number;
     write: (line: string) => void;
 }): Promise<void>;
+/**
+ * The trierarch's log where its service writes it: the file the launchd agent
+ * writes on macOS (and wherever no service of ours runs it), the journal of
+ * the systemd user unit on Linux, read through `journalctl` (#474).
+ */
+export interface ServiceLog {
+    /** Where the log is: its file, or the command that reads the journal. */
+    readonly where: {
+        readonly file: string;
+    } | {
+        readonly journal: string;
+    };
+    /** The last `lines` lines. */
+    tail(lines: number): Promise<string[]>;
+    /** Writes each line added after it starts, until `signal` aborts. */
+    follow(at: {
+        signal: AbortSignal;
+        intervalMs: number;
+        write: (line: string) => void;
+    }): Promise<void>;
+}
+/** Runs a program until it ends or is stopped, writing each line it prints. */
+export type Stream = (command: string, options: {
+    args: readonly string[];
+    signal: AbortSignal;
+    write: (line: string) => void;
+}) => Promise<void>;
+export declare function createServiceLog(at: {
+    platform: string;
+    file: string;
+    exec: Exec;
+    stream: Stream;
+}): ServiceLog;