@aehrc/smart-forms-renderer 1.2.11 → 1.2.13

package/lib/utils/answerExpression.js

@@ -0,0 +1,133 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import fhirpath from 'fhirpath';
+import fhirpath_r4_model from 'fhirpath/fhir-context/r4';
+import _isEqual from 'lodash/isEqual';
+import cloneDeep from 'lodash.clonedeep';
+import { emptyResponse } from './emptyResource';
+import { createFhirPathContext, evaluateTerminologyLinkIdVariables } from './fhirpath';
+export function evaluateInitialAnswerExpressions(params) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const { initialResponse, initialResponseItemMap, answerExpressions, variablesFhirPath, existingFhirPathContext } = params;
+        // Return early if initialResponse is empty or there are no answer expressions to evaluate
+        if (_isEqual(initialResponse, cloneDeep(emptyResponse)) ||
+            Object.keys(answerExpressions).length === 0) {
+            return {
+                initialAnswerExpressions: answerExpressions,
+                updatedFhirPathContext: existingFhirPathContext
+            };
+        }
+        const initialAnswerExpressions = Object.assign({}, answerExpressions);
+        let updatedFhirPathContext = yield createFhirPathContext(initialResponse, initialResponseItemMap, variablesFhirPath, existingFhirPathContext);
+        // Perform initial evaluation of terminology variables
+        for (const linkId in variablesFhirPath) {
+            updatedFhirPathContext = yield evaluateTerminologyLinkIdVariables(linkId, variablesFhirPath, updatedFhirPathContext);
+        }
+        for (const linkId in initialAnswerExpressions) {
+            const answerExpression = initialAnswerExpressions[linkId];
+            try {
+                const result = fhirpath.evaluate({}, answerExpression.expression, updatedFhirPathContext, fhirpath_r4_model);
+                // Update calculatedExpressions if length of result array > 0
+                // Only update when current calcExpression value is different from the result, otherwise it will result in an infinite loop as per issue #733
+                if (result.length > 0 && !_isEqual(answerExpression.options, result)) {
+                    answerExpression.options = getAnswerOptionsFromResults(result);
+                    answerExpression.version = answerExpression.version + 1;
+                }
+                // Update calculatedExpression value to null if no result is returned
+                if (result.length === 0 && !!answerExpression.options) {
+                    // Only update if current options is not empty
+                    if (answerExpression.options.length > 0) {
+                        answerExpression.options = [];
+                        answerExpression.version = answerExpression.version + 1;
+                    }
+                }
+            }
+            catch (e) {
+                console.warn(e.message, `LinkId: ${linkId}\nExpression: ${answerExpression.options}`);
+            }
+            initialAnswerExpressions[linkId] = answerExpression;
+        }
+        return {
+            initialAnswerExpressions,
+            updatedFhirPathContext
+        };
+    });
+}
+export function evaluateAnswerExpressions(fhirPathContext, answerExpressions) {
+    const updatedAnswerExpressions = Object.assign({}, answerExpressions);
+    let isUpdated = false;
+    for (const linkId in answerExpressions) {
+        const answerExpression = answerExpressions[linkId];
+        try {
+            const result = fhirpath.evaluate({}, answerExpression.expression, fhirPathContext, fhirpath_r4_model);
+            // Update calculatedExpressions if length of result array > 0
+            // Only update when current calcExpression value is different from the result, otherwise it will result in an infinite loop as per issue #733
+            if (result.length > 0 && !_isEqual(answerExpression.options, result)) {
+                isUpdated = true;
+                answerExpression.options = getAnswerOptionsFromResults(result);
+                answerExpression.version = answerExpression.version + 1;
+            }
+            // Update calculatedExpression value to null if no result is returned
+            if (result.length === 0 && !!answerExpression.options) {
+                // Only update if current options is not empty
+                if (answerExpression.options.length > 0) {
+                    isUpdated = true;
+                    answerExpression.options = [];
+                    answerExpression.version = answerExpression.version + 1;
+                }
+            }
+        }
+        catch (e) {
+            console.warn(e.message, `LinkId: ${linkId}\nExpression: ${answerExpression.options}`);
+        }
+        updatedAnswerExpressions[linkId] = answerExpression;
+    }
+    return {
+        answerExpsIsUpdated: isUpdated,
+        updatedAnswerExpressions: updatedAnswerExpressions
+    };
+}
+function getAnswerOptionsFromResults(result) {
+    if (!Array.isArray(result)) {
+        return [];
+    }
+    return result
+        .map((item) => {
+        var _a;
+        if (item.system && item.code) {
+            return {
+                valueCoding: {
+                    system: item.system,
+                    code: item.code,
+                    display: (_a = item.display) !== null && _a !== void 0 ? _a : undefined
+                }
+            };
+        }
+        return item;
+    })
+        .filter((item) => typeof item === 'object');
+}
+//# sourceMappingURL=answerExpression.js.map

package/lib/utils/answerExpression.js.map

@@ -0,0 +1 @@
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package/lib/utils/calculatedExpression.js

@@ -222,13 +222,9 @@ function applyCalculatedExpressionValuesRecursive(qItem, qrItemOrItems, calculat
             }
             : null, calculatedExpressions);
     }
-    let qrItem = qrItemOrItems;
+    const qrItem = qrItemOrItems;
     const childQItems = qItem.item;
     if (childQItems && childQItems.length > 0) {
-        // If item.type is 'group', create empty group qrItem
-        if (qItem.type === 'group') {
-            qrItem = qrItemOrItems ?? structuredClone(createEmptyQrGroup(qItem));
-        }
         const childQrItems = qrItem?.item ?? [];
         const indexMap = mapQItemsIndex(qItem);
         const qrItemsByIndex = getQrItemsIndex(childQItems, childQrItems, indexMap);

package/lib/utils/calculatedExpression.js.map

@@ -1 +1 @@
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package/lib/utils/dayjsExtend.d.ts

@@ -0,0 +1 @@
+export {};

package/lib/utils/dayjsExtend.js

@@ -0,0 +1,22 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import dayjs from 'dayjs';
+import localizedFormat from 'dayjs/plugin/localizedFormat';
+import customParseFormat from 'dayjs/plugin/customParseFormat';
+dayjs.extend(localizedFormat);
+dayjs.extend(customParseFormat);
+//# sourceMappingURL=dayjsExtend.js.map

package/lib/utils/dayjsExtend.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"dayjsExtend.js","sourceRoot":"","sources":["../../src/utils/dayjsExtend.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AAEH,OAAO,KAAK,MAAM,OAAO,CAAC;AAC1B,OAAO,eAAe,MAAM,8BAA8B,CAAC;AAC3D,OAAO,iBAAiB,MAAM,gCAAgC,CAAC;AAE/D,KAAK,CAAC,MAAM,CAAC,eAAe,CAAC,CAAC;AAC9B,KAAK,CAAC,MAAM,CAAC,iBAAiB,CAAC,CAAC"}

package/lib/utils/dynamicValueSet.d.ts

@@ -0,0 +1,5 @@
+import type { DynamicValueSet } from '../interfaces/valueSet.interface';
+export declare function evaluateDynamicValueSets(fhirPathContext: Record<string, any>, dynamicValueSets: Record<string, DynamicValueSet>): {
+    dynamicValueSetsIsUpdated: boolean;
+    updatedDynamicValueSets: Record<string, DynamicValueSet>;
+};

package/lib/utils/dynamicValueSet.js

@@ -0,0 +1,96 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import fhirpath from 'fhirpath';
+import fhirpath_r4_model from 'fhirpath/fhir-context/r4';
+import cloneDeep from 'lodash.clonedeep';
+import _isEqual from 'lodash/isEqual';
+export function evaluateDynamicValueSets(fhirPathContext, dynamicValueSets) {
+    var _a;
+    const updatedDynamicValueSets = cloneDeep(dynamicValueSets);
+    let isUpdated = false;
+    for (const linkId in updatedDynamicValueSets) {
+        const dynamicValueSet = updatedDynamicValueSets[linkId];
+        const completeResource = dynamicValueSet.sourceResource;
+        const valueSetComposeInclude = (_a = completeResource.compose) === null || _a === void 0 ? void 0 : _a.include;
+        if (valueSetComposeInclude && valueSetComposeInclude.length > 0) {
+            for (const include of valueSetComposeInclude) {
+                if (!include.filter) {
+                    continue;
+                }
+                // There are filters present, check for fhirpath embeddings
+                const fhirPathEmbeddingsMap = {};
+                for (const filter of include.filter) {
+                    const filterValue = filter.value;
+                    if (filterValue.includes('{{') && filterValue.includes('}}')) {
+                        if (filterValue) {
+                            for (const embedding of readFhirPathEmbeddingsFromStr(filterValue)) {
+                                if (embedding) {
+                                    fhirPathEmbeddingsMap[embedding] = '';
+                                }
+                            }
+                        }
+                    }
+                }
+                const evaluatedFhirPathEmbeddingsMap = evaluateFhirPathEmbeddings(fhirPathEmbeddingsMap, fhirPathContext);
+                const evaluatedFhirPathEmbeddingsTuple = Object.entries(evaluatedFhirPathEmbeddingsMap).filter(([, value]) => value != '');
+                for (const filter of include.filter) {
+                    evaluatedFhirPathEmbeddingsTuple.forEach(([embedding, value]) => {
+                        const filterValue = filter.value;
+                        const pattern = new RegExp(`{{%${embedding}}}`, 'g');
+                        filter.value = filterValue.replace(pattern, value);
+                    });
+                }
+            }
+        }
+        // Complete resource has been updated, update the dynamicValueSet object
+        if (!_isEqual(dynamicValueSets[linkId].completeResource, completeResource)) {
+            isUpdated = true;
+            // If source response same as the complete resource, embeddings are not replaced, therefore ValueSet is not complete
+            updatedDynamicValueSets[linkId] = {
+                sourceResource: dynamicValueSets[linkId].sourceResource,
+                completeResource: dynamicValueSet.sourceResource,
+                version: dynamicValueSet.version + 1,
+                isComplete: !_isEqual(dynamicValueSets[linkId].sourceResource, completeResource)
+            };
+        }
+    }
+    // after that we need to update the dynamicvalueset object - iscomplete so that we can use it in useMemo - or potentially updated the version of the dynamic updatedcount
+    return {
+        dynamicValueSetsIsUpdated: isUpdated,
+        updatedDynamicValueSets: updatedDynamicValueSets
+    };
+}
+function evaluateFhirPathEmbeddings(fhirPathEmbeddingsMap, fhirPathContext) {
+    // evaluate fhirpath embeddings within map
+    Object.keys(fhirPathEmbeddingsMap).forEach((embedding) => {
+        try {
+            const result = fhirpath.evaluate({}, `%${embedding}`, fhirPathContext, fhirpath_r4_model)[0];
+            if (result !== undefined && result !== null) {
+                fhirPathEmbeddingsMap[embedding] = result;
+            }
+        }
+        catch (e) {
+            console.warn(e);
+        }
+    });
+    return fhirPathEmbeddingsMap;
+}
+const FHIRPATH_EMBEDDING_REGEX = /{{%(.*?)}}/g;
+function readFhirPathEmbeddingsFromStr(expression) {
+    return [...expression.matchAll(FHIRPATH_EMBEDDING_REGEX)].map((match) => { var _a; return (_a = match[1]) !== null && _a !== void 0 ? _a : ''; });
+}
+//# sourceMappingURL=dynamicValueSet.js.map

package/lib/utils/dynamicValueSet.js.map

@@ -0,0 +1 @@
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package/lib/utils/extensions.d.ts

@@ -1,4 +1,4 @@
-import type { Extension, QuestionnaireItem, QuestionnaireItemAnswerOption } from 'fhir/r4';
+import type { Element, Extension, QuestionnaireItem, QuestionnaireItemAnswerOption } from 'fhir/r4';
 import type { RegexValidation } from '../interfaces/regex.interface';
 import type { JSX } from 'react';
 export declare function hasDisplayCategory(qItem: QuestionnaireItem): boolean;
@@ -47,7 +47,7 @@ export declare function getXHtmlString(qItem: QuestionnaireItem): string | null;
  *
  * @author Sean Fong
  */
-export declare function getMarkdownString(qItem: QuestionnaireItem): string | null;
+export declare function getMarkdownString(element: Element | undefined): string | null;
 /**
  * Get text display prompt for items with itemControlCode prompt and has a prompt childItem
  *

package/lib/utils/extensions.js

@@ -103,8 +103,8 @@ export function getXHtmlString(qItem) {
  *
  * @author Sean Fong
  */
-export function getMarkdownString(qItem) {
-    const extension = qItem._text?.extension?.find((extension) => extension.url === 'http://hl7.org/fhir/StructureDefinition/rendering-markdown');
+export function getMarkdownString(element) {
+    const extension = element?.extension?.find((extension) => extension.url === 'http://hl7.org/fhir/StructureDefinition/rendering-markdown');
     return extension?.valueMarkdown ?? null;
 }
 /**

package/lib/utils/extensions.js.map

@@ -1 +1 @@
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package/lib/utils/fhirpathAsyncUtils/fhirpath-async.d.ts

@@ -0,0 +1,14 @@
+import type { DomainResource } from 'fhir/r4b';
+/** Global debug variable to permit the logger to write information messages
+ to the OperationOutcome and console
+ */
+export declare const debugAsyncFhirpath: boolean;
+/**
+ * Evaluate a FHIRPath expression asynchronously
+ * @param fhirData FHIR resource to run the FHIRPath expression against
+ * @param path FHIRPath expression to evaluate (string or Path object)
+ * @param context Environment to evaluate the expression in, mostly variables
+ * @param model which fhir version to use (r4/r4b/r5)
+ * @returns the result of the evaluation
+ */
+export declare function evaluateFhirpathAsync(fhirData: DomainResource, path: string | Path, context?: Record<string, any>, model?: Model): Promise<any[]>;