@aehrc/smart-forms-renderer 1.0.0-alpha.42.dev7 → 1.0.0-alpha.42.dev9

package/lib/utils/validate.js.map

@@ -0,0 +1 @@
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package/lib/utils/valueSet.d.ts

@@ -0,0 +1,29 @@
+import type { Coding, Encounter, Expression, FhirResource, Patient, Practitioner, QuestionnaireItem, ValueSet } from 'fhir/r4';
+import type { FhirResourceString } from '../interfaces/populate.interface';
+import type { VariableXFhirQuery } from '../interfaces/variables.interface';
+import type { ValidateCodeResponse, ValueSetPromise } from '../interfaces/valueSet.interface';
+export declare function getTerminologyServerUrl(qItem: QuestionnaireItem): string | undefined;
+export declare function getValueSetPromise(url: string, terminologyServerUrl: string): Promise<ValueSet>;
+export declare function validateCodePromise(url: string, system: string, code: string, terminologyServerUrl: string): Promise<ValidateCodeResponse | null>;
+export declare function resolveValueSetPromises(valueSetPromises: Record<string, ValueSetPromise>): Promise<Record<string, ValueSetPromise>>;
+/**
+ * Sets an array of codings with the values from a valueSet
+ *
+ * @author Sean Fong
+ */
+export declare function getValueSetCodings(valueSet: ValueSet): Coding[];
+/**
+ * Retrieves only the relevant properties of a Coding object.
+ * Reason: https://tx.ontoserver.csiro.au/fhir returns a Coding with designation element, which is not in the FHIR spec, causing QRs with it to fail validation.
+ *
+ * @author Sean Fong
+ */
+export declare function getRelevantCodingProperties(coding: Coding): Coding;
+/**
+ * Evaluate valueSets in answerExpression with fhirpath
+ *
+ * @author Sean Fong
+ */
+export declare function evaluateAnswerExpressionValueSet(answerExpression: Expression, itemLevelVariables: Expression[], preprocessedCodings: Record<string, Coding[]>): Coding[];
+export declare function createValueSetToXFhirQueryVariableNameMap(variables: Record<string, VariableXFhirQuery>): Record<string, string>;
+export declare function getResourceFromLaunchContext(resourceType: FhirResourceString, patient: Patient | null, user: Practitioner | null, encounter: Encounter | null): FhirResource | null;

package/lib/utils/valueSet.js

@@ -0,0 +1,171 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import * as FHIR from 'fhirclient';
+const VALID_VALUE_SET_URL_REGEX = /https?:\/\/(www\.)?[-\w@:%.+~#=]{2,256}\.[a-z]{2,4}\b([-@\w:%+.~#?&/=]*ValueSet[-@\w:%+.~#?&/=]*)/;
+const VALID_FHIRPATH_VARIABLE_REGEX = /%(.*?)\./;
+// Mainly for backwards compatibility, doesn't exist in the SDC spec anymore
+export function getTerminologyServerUrl(qItem) {
+    var _a;
+    const itemControl = (_a = qItem.extension) === null || _a === void 0 ? void 0 : _a.find((extension) => extension.url === 'http://hl7.org/fhir/StructureDefinition/terminology-server');
+    if (itemControl) {
+        return itemControl.valueUrl;
+    }
+    return undefined;
+}
+export function getValueSetPromise(url, terminologyServerUrl) {
+    let valueSetUrl = url;
+    if (url.includes('ValueSet/$expand?url=')) {
+        const splitUrl = url.split('ValueSet/$expand?url=');
+        if (splitUrl[0] && splitUrl[1]) {
+            terminologyServerUrl = splitUrl[0];
+            valueSetUrl = splitUrl[1];
+        }
+    }
+    valueSetUrl = valueSetUrl.replace('|', '&version=');
+    return FHIR.client({ serverUrl: terminologyServerUrl }).request({
+        url: 'ValueSet/$expand?url=' + valueSetUrl
+    });
+}
+function validateCodeResponseIsValid(response) {
+    return (response &&
+        response.resourceType === 'Parameters' &&
+        response.parameter &&
+        response.parameter.find((p) => p.name === 'code') &&
+        response.parameter.find((p) => p.name === 'code').valueCode &&
+        response.parameter.find((p) => p.name === 'system') &&
+        response.parameter.find((p) => p.name === 'system').valueUri &&
+        response.parameter.find((p) => p.name === 'display') &&
+        response.parameter.find((p) => p.name === 'display').valueString);
+}
+export function validateCodePromise(url, system, code, terminologyServerUrl) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const validateCodeResponse = yield FHIR.client({ serverUrl: terminologyServerUrl }).request({
+            url: `ValueSet/$validate-code?url=${url}&system=${system}&code=${code}`
+        });
+        if (validateCodeResponse && validateCodeResponseIsValid(validateCodeResponse)) {
+            return validateCodeResponse;
+        }
+        return null;
+    });
+}
+function addTimeoutToPromise(promise, timeoutMs) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const timeoutPromise = new Promise((_, reject) => {
+            setTimeout(() => {
+                reject(new Error(`Promise timed out after ${timeoutMs} milliseconds`));
+            }, timeoutMs);
+        });
+        // Use Promise.race to wait for either the original promise or the timeout promise
+        return Promise.race([promise, timeoutPromise]);
+    });
+}
+export function resolveValueSetPromises(valueSetPromises) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const newValueSetPromises = {};
+        const valueSetPromiseKeys = Object.keys(valueSetPromises);
+        const valueSetPromiseValues = Object.values(valueSetPromises);
+        const timeoutMs = 5000;
+        const promises = valueSetPromiseValues.map((valueSetPromise) => addTimeoutToPromise(valueSetPromise.promise, timeoutMs));
+        const settledPromises = yield Promise.allSettled(promises);
+        for (const [i, settledPromise] of settledPromises.entries()) {
+            // Only add valueSet if the promise was fulfilled
+            if (settledPromise.status === 'fulfilled') {
+                const valueSet = settledPromise.value;
+                const key = valueSetPromiseKeys[i];
+                const valueSetPromise = valueSetPromiseValues[i];
+                if (key && valueSetPromise) {
+                    valueSetPromise.valueSet = valueSet;
+                    newValueSetPromises[key] = valueSetPromise;
+                }
+            }
+        }
+        return newValueSetPromises;
+    });
+}
+/**
+ * Sets an array of codings with the values from a valueSet
+ *
+ * @author Sean Fong
+ */
+export function getValueSetCodings(valueSet) {
+    var _a, _b, _c;
+    return (_c = (_b = (_a = valueSet.expansion) === null || _a === void 0 ? void 0 : _a.contains) === null || _b === void 0 ? void 0 : _b.map((coding) => getRelevantCodingProperties(coding))) !== null && _c !== void 0 ? _c : [];
+}
+/**
+ * Retrieves only the relevant properties of a Coding object.
+ * Reason: https://tx.ontoserver.csiro.au/fhir returns a Coding with designation element, which is not in the FHIR spec, causing QRs with it to fail validation.
+ *
+ * @author Sean Fong
+ */
+export function getRelevantCodingProperties(coding) {
+    return Object.assign({ system: coding.system, code: coding.code, display: coding.display }, (coding.extension && { extension: coding.extension }));
+}
+/**
+ * Evaluate valueSets in answerExpression with fhirpath
+ *
+ * @author Sean Fong
+ */
+export function evaluateAnswerExpressionValueSet(answerExpression, itemLevelVariables, preprocessedCodings) {
+    var _a;
+    const expression = answerExpression.expression;
+    if (!expression)
+        return [];
+    const match = expression.match(VALID_FHIRPATH_VARIABLE_REGEX);
+    const variableName = match === null || match === void 0 ? void 0 : match[1];
+    if (!variableName)
+        return [];
+    const matchedVariable = itemLevelVariables === null || itemLevelVariables === void 0 ? void 0 : itemLevelVariables.find((variable) => variable.name === variableName);
+    if (!matchedVariable)
+        return [];
+    const valueSetExpression = matchedVariable.expression;
+    if (!valueSetExpression)
+        return [];
+    if (!VALID_VALUE_SET_URL_REGEX.test(valueSetExpression))
+        return [];
+    return (_a = preprocessedCodings[valueSetExpression]) !== null && _a !== void 0 ? _a : [];
+}
+export function createValueSetToXFhirQueryVariableNameMap(variables) {
+    const valueSetToNameMap = {};
+    for (const [name, variable] of Object.entries(variables)) {
+        const expressionStr = variable.valueExpression.expression;
+        if (expressionStr && VALID_VALUE_SET_URL_REGEX.test(expressionStr)) {
+            valueSetToNameMap[expressionStr] = name;
+        }
+    }
+    return valueSetToNameMap;
+}
+export function getResourceFromLaunchContext(resourceType, patient, user, encounter) {
+    switch (resourceType) {
+        case 'Patient':
+            return patient;
+        case 'Practitioner':
+            return user;
+        case 'Encounter':
+            return encounter;
+    }
+    return null;
+}
+//# sourceMappingURL=valueSet.js.map

package/lib/utils/valueSet.js.map

@@ -0,0 +1 @@
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package/package.json

@@ -1,7 +1,8 @@
 {
   "name": "@aehrc/smart-forms-renderer",
-  "version": "1.0.0-alpha.42.dev7",
+  "version": "1.0.0-alpha.42.dev9",
   "description": "FHIR Structured Data Captured (SDC) rendering engine for Smart Forms",
+  "main": "lib/index.js",
   "scripts": {
     "compile": "tsup src/index.ts --format cjs,esm --dts --clean --sourcemap",
     "watch": "tsup src/index.ts --format cjs,esm --dts --clean --sourcemap --watch",
@@ -96,19 +97,5 @@
     "tslib": "^2.8.1",
     "tsup": "^8.4.0",
     "typescript": "^5.8.2"
-  },
-  "type": "module",
-  "main": "./dist/index.cjs",
-  "module": "./dist/index.js",
-  "types": "./dist/index.d.ts",
-  "exports": {
-    "import": {
-      "types": "./dist/index.d.ts",
-      "import": "./dist/index.js"
-    },
-    "require": {
-      "types": "./dist/index.d.cts",
-      "require": "./dist/index.cjs"
-    }
   }
 }

package/src/components/FormComponents/QuantityItem/QuantityUnitField.tsx

@@ -37,16 +37,7 @@ function QuantityUnitField(props: QuantityUnitFieldProps) {
       readOnly={readOnly && readOnlyVisualStyle === 'readonly'}
       size="small"
       renderInput={(params) => (
-        <StandardTextField
-          textFieldWidth={textFieldWidth}
-          isTabled={isTabled}
-          {...params}
-          slotProps={{
-            input: {
-              readOnly: readOnly && readOnlyVisualStyle === 'readonly'
-            }
-          }}
-        />
+        <StandardTextField textFieldWidth={textFieldWidth} isTabled={isTabled} {...params} />
       )}
     />
   );