@aehrc/smart-forms-renderer 1.0.0-alpha.42.dev7 → 1.0.0-alpha.42.dev8

package/lib/utils/questionnaireStoreUtils/extractOtherExtensions.js

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+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import { getTerminologyServerUrl, getValueSetPromise } from '../valueSet';
+import { getFhirPathVariables, getXFhirQueryVariables } from './extractVariables';
+import { getRepeatGroupParentItem } from '../misc';
+import { checkItemIsEnabledRepeat } from '../enableWhen';
+import { emptyResponse } from '../emptyResource';
+import { evaluateEnableWhenRepeatExpressionInstance } from '../enableWhenExpression';
+import { getAnswerExpression, getCalculatedExpressions, getEnableWhenExpression, getInitialExpression } from '../getExpressionsFromItem';
+import { addBindingParametersToValueSetUrl, getBindingParameters } from '../parameterisedValueSets';
+export function extractOtherExtensions(questionnaire, variables, valueSetPromises, processedValueSets, cachedValueSetCodings, itemPreferredTerminologyServers, terminologyServerUrl) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const enableWhenItems = { singleItems: {}, repeatItems: {} };
+        const enableWhenExpressions = {
+            singleExpressions: {},
+            repeatExpressions: {}
+        };
+        const calculatedExpressions = {};
+        const initialExpressions = {};
+        const answerExpressions = {};
+        const answerOptions = {};
+        if (!questionnaire.item || questionnaire.item.length === 0) {
+            return {
+                variables: variables,
+                enableWhenItems: { singleItems: {}, repeatItems: {} },
+                enableWhenExpressions: {
+                    singleExpressions: {},
+                    repeatExpressions: {}
+                },
+                calculatedExpressions: {},
+                initialExpressions: {},
+                answerExpressions: {},
+                answerOptions: {},
+                valueSetPromises: valueSetPromises,
+                processedValueSets: processedValueSets,
+                cachedValueSetCodings: cachedValueSetCodings
+            };
+        }
+        for (const topLevelItem of questionnaire.item) {
+            const isRepeatGroup = !!topLevelItem.repeats && topLevelItem.type === 'group';
+            yield extractExtensionsFromItemRecursive({
+                questionnaire,
+                item: topLevelItem,
+                variables,
+                enableWhenItems,
+                enableWhenExpressions,
+                calculatedExpressions,
+                initialExpressions,
+                answerExpressions,
+                answerOptions,
+                valueSetPromises,
+                processedValueSets,
+                cachedValueSetCodings,
+                itemPreferredTerminologyServers,
+                defaultTerminologyServerUrl: terminologyServerUrl,
+                parentRepeatGroupLinkId: isRepeatGroup ? topLevelItem.linkId : undefined
+            });
+        }
+        return {
+            variables,
+            enableWhenItems,
+            enableWhenExpressions,
+            calculatedExpressions,
+            initialExpressions,
+            answerExpressions,
+            answerOptions,
+            valueSetPromises,
+            processedValueSets,
+            cachedValueSetCodings
+        };
+    });
+}
+function extractExtensionsFromItemRecursive(params) {
+    var _a, _b, _c;
+    return __awaiter(this, void 0, void 0, function* () {
+        const { questionnaire, item, variables, enableWhenItems, enableWhenExpressions, calculatedExpressions, initialExpressions, answerExpressions, answerOptions, valueSetPromises, processedValueSets, cachedValueSetCodings, itemPreferredTerminologyServers, defaultTerminologyServerUrl, parentRepeatGroupLinkId } = params;
+        const items = item.item;
+        const isRepeatGroup = !!item.repeats && item.type === 'group';
+        if (items && items.length > 0) {
+            // iterate through items of item recursively
+            for (const childItem of items) {
+                yield extractExtensionsFromItemRecursive(Object.assign(Object.assign({}, params), { item: childItem, parentRepeatGroupLinkId: isRepeatGroup ? item.linkId : parentRepeatGroupLinkId }));
+            }
+        }
+        // Read enable when items, enableWhen/calculated/answer expressions, valueSets and variables from qItem
+        const initialisedEnableWhenItemProperties = initialiseEnableWhenItemProperties(item, questionnaire, parentRepeatGroupLinkId);
+        if (initialisedEnableWhenItemProperties) {
+            const { enableWhenItemType, enableWhenItemProperties } = initialisedEnableWhenItemProperties;
+            if (enableWhenItemType === 'single') {
+                enableWhenItems.singleItems[item.linkId] =
+                    enableWhenItemProperties;
+            }
+            else if (enableWhenItemType === 'repeat') {
+                enableWhenItems.repeatItems[item.linkId] =
+                    enableWhenItemProperties;
+            }
+        }
+        // Get preferred terminology server URL of the item
+        const preferredTerminologyServerUrl = itemPreferredTerminologyServers[item.linkId];
+        const terminologyServerUrl = (_b = (_a = getTerminologyServerUrl(item)) !== null && _a !== void 0 ? _a : preferredTerminologyServerUrl) !== null && _b !== void 0 ? _b : defaultTerminologyServerUrl;
+        const initialisedEnableWhenExpressions = yield initialiseEnableWhenExpression(item, questionnaire, terminologyServerUrl, parentRepeatGroupLinkId);
+        if (initialisedEnableWhenExpressions) {
+            const { enableWhenExpressionType, enableWhenExpression } = initialisedEnableWhenExpressions;
+            if (enableWhenExpressionType === 'single') {
+                enableWhenExpressions.singleExpressions[item.linkId] =
+                    enableWhenExpression;
+            }
+            else if (enableWhenExpressionType === 'repeat') {
+                enableWhenExpressions.repeatExpressions[item.linkId] =
+                    enableWhenExpression;
+            }
+        }
+        // Get calculatedExpressions
+        const calculatedExpressionsOfItem = getCalculatedExpressions(item);
+        if (calculatedExpressionsOfItem.length > 0) {
+            calculatedExpressions[item.linkId] = calculatedExpressionsOfItem;
+        }
+        // Get initialExpressions
+        const initialExpression = getInitialExpression(item);
+        if (initialExpression) {
+            initialExpressions[item.linkId] = {
+                expression: `${initialExpression.expression}`
+            };
+        }
+        // Get answerExpressions
+        const answerExpression = getAnswerExpression(item);
+        if (answerExpression) {
+            answerExpressions[item.linkId] = {
+                expression: `${answerExpression.expression}`
+            };
+        }
+        // Get answerOptions
+        const options = (_c = item.answerOption) !== null && _c !== void 0 ? _c : null;
+        if (options) {
+            answerOptions[item.linkId] = options;
+        }
+        const initialValueSetUrl = item.answerValueSet;
+        if (initialValueSetUrl) {
+            const bindingParameters = getBindingParameters(item, initialValueSetUrl);
+            const fixedBindingParameters = bindingParameters.filter((param) => !param.fhirPathExpression);
+            const isDynamic = bindingParameters.length !== fixedBindingParameters.length;
+            const valueSetUrlWithParams = addBindingParametersToValueSetUrl(initialValueSetUrl, fixedBindingParameters);
+            // Only continue to process if answerValueSetUrl is not a reference, because we have already processed it earlier
+            if (!initialValueSetUrl.startsWith('#')) {
+                // Get valueSet promise to be resolved
+                // Note: this entry uses valueSetUrlWithParams as the key
+                if (!valueSetPromises[initialValueSetUrl]) {
+                    valueSetPromises[valueSetUrlWithParams] = {
+                        promise: getValueSetPromise(valueSetUrlWithParams, terminologyServerUrl)
+                    };
+                }
+                // Create entries in processedValueSets and cachedValueSetCodings
+                // Note: initialValueSetUrl is key for processedValueSets, while valueSetUrlWithParams is key for cachedValueSetCodings
+                if (!processedValueSets[initialValueSetUrl]) {
+                    processedValueSets[initialValueSetUrl] = {
+                        initialValueSetUrl: initialValueSetUrl,
+                        updatableValueSetUrl: valueSetUrlWithParams,
+                        bindingParameters: bindingParameters,
+                        isDynamic: isDynamic,
+                        linkIds: [item.linkId]
+                    };
+                }
+                else {
+                    processedValueSets[initialValueSetUrl].linkIds.push(item.linkId);
+                }
+                cachedValueSetCodings[valueSetUrlWithParams] = [];
+            }
+        }
+        if (item.extension) {
+            variables.fhirPathVariables[item.linkId] = getFhirPathVariables(item.extension);
+            for (const expression of getXFhirQueryVariables(item.extension)) {
+                if (expression.name) {
+                    variables.xFhirQueryVariables[expression.name] = {
+                        valueExpression: expression
+                    };
+                }
+            }
+        }
+        return {
+            variables,
+            enableWhenItems,
+            enableWhenExpressions,
+            calculatedExpressions,
+            initialExpressions,
+            answerExpressions,
+            answerOptions,
+            valueSetPromises,
+            processedValueSets,
+            cachedValueSetCodings
+        };
+    });
+}
+/**
+ * Get enableWhen items' linked items and enableBehaviour attribute and save them in an EnableWhenItemProperties object
+ *
+ * @author Sean Fong
+ */
+export function initialiseEnableWhenItemProperties(qItem, questionnaire, parentLinkId) {
+    const enableWhen = qItem.enableWhen;
+    if (!enableWhen) {
+        return null;
+    }
+    // Parent repeat group linkId exist, try to classify this item as a repeat enableWhen item
+    if (parentLinkId) {
+        const enableWhenRepeatItemProperties = initialiseEnableWhenRepeatItemProperties(qItem, enableWhen, questionnaire, parentLinkId);
+        if (enableWhenRepeatItemProperties) {
+            return {
+                enableWhenItemType: 'repeat',
+                enableWhenItemProperties: enableWhenRepeatItemProperties
+            };
+        }
+    }
+    // If parentLinkId is not provided or item cannot be classified as a repeat enableWhen item, classify it as a single enableWhen item
+    const enableWhenSingleItemProperties = initialiseEnableWhenSingleItemProperties(qItem, enableWhen);
+    return {
+        enableWhenItemType: 'single',
+        enableWhenItemProperties: enableWhenSingleItemProperties
+    };
+}
+export function initialiseEnableWhenRepeatItemProperties(qItem, enableWhen, questionnaire, parentLinkId) {
+    const linkedItemsNullable = enableWhen.map((linkedItem) => {
+        const linkedParentItem = getRepeatGroupParentItem(questionnaire, linkedItem.question);
+        // Check if parentLinkId match the linked item's parent linkId
+        if (parentLinkId === (linkedParentItem === null || linkedParentItem === void 0 ? void 0 : linkedParentItem.linkId)) {
+            return { enableWhen: linkedItem, parentLinkId: linkedParentItem.linkId, answers: [] };
+        }
+        // Otherwise, this linked item is not a valid repeat enableWhen linked item
+        return null;
+    });
+    // If any linked item is not valid, exit early
+    if (linkedItemsNullable.some((linkedItem) => linkedItem === null)) {
+        return null;
+    }
+    const linkedItems = linkedItemsNullable;
+    const enableWhenRepeatItemProperties = {
+        linked: linkedItems,
+        parentLinkId: parentLinkId,
+        enabledIndexes: [false],
+        enableBehavior: qItem.enableBehavior
+    };
+    enableWhenRepeatItemProperties.enabledIndexes[0] = checkItemIsEnabledRepeat(enableWhenRepeatItemProperties, 0);
+    return enableWhenRepeatItemProperties;
+}
+/**
+ * Get enableWhen items' linked items and enableBehaviour attribute and save them in an EnableWhenItemProperties object
+ *
+ * @author Sean Fong
+ */
+export function initialiseEnableWhenSingleItemProperties(qItem, enableWhen) {
+    return {
+        linked: enableWhen.map((linkedItem) => {
+            return { enableWhen: linkedItem };
+        }),
+        isEnabled: false,
+        enableBehavior: qItem.enableBehavior
+    };
+}
+function initialiseEnableWhenExpressionRepeat(enableWhenExpression, questionnaire, parentLinkId) {
+    const expression = enableWhenExpression.expression;
+    if (!expression) {
+        return null;
+    }
+    // Get the last linkId in the expression
+    const regExpLinkId = /linkId\s*=\s*'([^']+)'/g;
+    const matches = expression.replace(' ', '').match(regExpLinkId);
+    if (!matches) {
+        return null;
+    }
+    const linkIdMatches = matches.map((match) => match.substring(match.indexOf("'") + 1, match.lastIndexOf("'")));
+    const lastLinkIdMatch = linkIdMatches[linkIdMatches.length - 1];
+    // Use the last linkId as the linkedItem, and get it's repeat group parent item's linkId
+    // If both parent linkId matches, this enableWhenExpression is a repeat enableWhenExpression
+    const linkedParentItem = getRepeatGroupParentItem(questionnaire, lastLinkIdMatch);
+    if (parentLinkId === (linkedParentItem === null || linkedParentItem === void 0 ? void 0 : linkedParentItem.linkId)) {
+        return enableWhenExpression;
+    }
+    return null;
+}
+function initialiseEnableWhenExpression(qItem, questionnaire, terminologyServerUrl, parentLinkId) {
+    return __awaiter(this, void 0, void 0, function* () {
+        const enableWhenExpression = getEnableWhenExpression(qItem);
+        if (!enableWhenExpression) {
+            return null;
+        }
+        // Parent repeat group linkId exist, try to classify this item as a repeat enableWhen item
+        if (parentLinkId) {
+            const expressionRepeat = initialiseEnableWhenExpressionRepeat(enableWhenExpression, questionnaire, parentLinkId);
+            if (expressionRepeat) {
+                const enableWhenRepeatExpression = {
+                    expression: `${expressionRepeat.expression}`,
+                    parentLinkId: parentLinkId,
+                    enabledIndexes: [false]
+                };
+                const { isEnabled } = yield evaluateEnableWhenRepeatExpressionInstance(qItem.linkId, { resource: structuredClone(emptyResponse) }, enableWhenRepeatExpression, enableWhenRepeatExpression.expression.lastIndexOf('.where(linkId'), 0, terminologyServerUrl);
+                if (typeof isEnabled === 'boolean') {
+                    enableWhenRepeatExpression.enabledIndexes[0] = isEnabled;
+                }
+                return {
+                    enableWhenExpressionType: 'repeat',
+                    enableWhenExpression: enableWhenRepeatExpression
+                };
+            }
+        }
+        return {
+            enableWhenExpressionType: 'single',
+            enableWhenExpression: {
+                expression: `${enableWhenExpression.expression}`
+            }
+        };
+    });
+}
+//# sourceMappingURL=extractOtherExtensions.js.map

package/lib/utils/questionnaireStoreUtils/extractOtherExtensions.js.map

@@ -0,0 +1 @@
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package/lib/utils/questionnaireStoreUtils/extractPages.d.ts

@@ -0,0 +1,3 @@
+import type { Questionnaire } from 'fhir/r4';
+import type { Pages } from '../../interfaces/page.interface';
+export declare function extractPages(questionnaire: Questionnaire): Pages;

package/lib/utils/questionnaireStoreUtils/extractPages.js

@@ -0,0 +1,25 @@
+import { constructPagesWithProperties, isFooter, isHeader, isPage } from '../page';
+export function extractPages(questionnaire) {
+    if (!questionnaire.item || questionnaire.item.length === 0) {
+        return {};
+    }
+    // Two scenarios to consider here:
+    /* 1. Proper way:
+     * - Every single top-level item is a page, header or footer
+     * Note: "header" and "footer" itemControl is not supported ATM so there's no way to have a header or footer
+     */
+    const renderQuestionnaireAsPaginated = questionnaire.item.every((item) => isPage(item) || isHeader(item) || isFooter(item));
+    if (renderQuestionnaireAsPaginated) {
+        return constructPagesWithProperties(questionnaire.item, false);
+    }
+    /* 2. Using "page" item as a page-container - only preserved for backwards compatibility
+     * - The first "page" item will be considered as a page-container, and all its children will be considered as pages
+     * - You can have non-page items in the same level as the page-container to be used as faux headers or footers
+     */
+    const pageContainerItem = questionnaire.item.find((item) => isPage(item));
+    if (pageContainerItem) {
+        return constructPagesWithProperties(pageContainerItem.item, true);
+    }
+    return {};
+}
+//# sourceMappingURL=extractPages.js.map

package/lib/utils/questionnaireStoreUtils/extractPages.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"extractPages.js","sourceRoot":"","sources":["../../../src/utils/questionnaireStoreUtils/extractPages.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,4BAA4B,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AAEnF,MAAM,UAAU,YAAY,CAAC,aAA4B;IACvD,IAAI,CAAC,aAAa,CAAC,IAAI,IAAI,aAAa,CAAC,IAAI,CAAC,MAAM,KAAK,CAAC,EAAE;QAC1D,OAAO,EAAE,CAAC;KACX;IAED,kCAAkC;IAClC;;;OAGG;IACH,MAAM,8BAA8B,GAAG,aAAa,CAAC,IAAI,CAAC,KAAK,CAC7D,CAAC,IAAI,EAAE,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,QAAQ,CAAC,IAAI,CAAC,IAAI,QAAQ,CAAC,IAAI,CAAC,CAC3D,CAAC;IAEF,IAAI,8BAA8B,EAAE;QAClC,OAAO,4BAA4B,CAAC,aAAa,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;KAChE;IAED;;;OAGG;IACH,MAAM,iBAAiB,GAAG,aAAa,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC;IAC1E,IAAI,iBAAiB,EAAE;QACrB,OAAO,4BAA4B,CAAC,iBAAiB,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC;KACnE;IAED,OAAO,EAAE,CAAC;AACZ,CAAC"}

package/lib/utils/questionnaireStoreUtils/extractTabs.d.ts

@@ -0,0 +1,3 @@
+import type { Questionnaire } from 'fhir/r4';
+import type { Tabs } from '../../interfaces/tab.interface';
+export declare function extractTabs(questionnaire: Questionnaire): Tabs;

package/lib/utils/questionnaireStoreUtils/extractTabs.js

@@ -0,0 +1,31 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+import { constructTabsWithProperties, isTabContainer } from '../tabs';
+export function extractTabs(questionnaire) {
+    if (!questionnaire.item || questionnaire.item.length === 0) {
+        return {};
+    }
+    let totalTabs = {};
+    for (const topLevelItem of questionnaire.item) {
+        const items = topLevelItem.item;
+        const topLevelItemIsTabContainer = isTabContainer(topLevelItem);
+        const tabs = constructTabsWithProperties(items, topLevelItemIsTabContainer);
+        totalTabs = Object.assign(Object.assign({}, totalTabs), tabs);
+    }
+    return totalTabs;
+}
+//# sourceMappingURL=extractTabs.js.map

package/lib/utils/questionnaireStoreUtils/extractTabs.js.map

@@ -0,0 +1 @@
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package/lib/utils/questionnaireStoreUtils/extractTargetConstraint.d.ts

@@ -0,0 +1,4 @@
+import type { Extension, Questionnaire } from 'fhir/r4';
+import type { TargetConstraint } from '../../interfaces/targetConstraint.interface';
+export declare function constructTargetConstraint(extension: Extension): TargetConstraint | null;
+export declare function extractTargetConstraints(questionnaire: Questionnaire): Record<string, TargetConstraint>;

package/lib/utils/questionnaireStoreUtils/extractTargetConstraint.js

@@ -0,0 +1,39 @@
+export function constructTargetConstraint(extension) {
+    var _a, _b, _c, _d, _e;
+    const targetConstraintUrl = extension.url;
+    const targetConstraintKey = (_a = extension.extension) === null || _a === void 0 ? void 0 : _a.find((ext) => ext.url === 'key' && typeof ext.valueId === 'string');
+    const targetConstraintSeverity = (_b = extension.extension) === null || _b === void 0 ? void 0 : _b.find((ext) => ext.url === 'severity' &&
+        ext.valueCode &&
+        (ext.valueCode === 'error' || ext.valueCode === 'warning'));
+    const targetConstraintExpression = (_c = extension.extension) === null || _c === void 0 ? void 0 : _c.find((ext) => ext.url === 'expression' && ext.valueExpression);
+    const targetConstraintHuman = (_d = extension.extension) === null || _d === void 0 ? void 0 : _d.find((ext) => ext.url === 'human' && ext.valueString);
+    const hasTargetConstraintLocation = (_e = extension.extension) === null || _e === void 0 ? void 0 : _e.find((ext) => ext.url === 'location' && ext.valueString);
+    if (targetConstraintUrl === 'http://hl7.org/fhir/StructureDefinition/targetConstraint' &&
+        targetConstraintKey &&
+        targetConstraintSeverity &&
+        targetConstraintExpression &&
+        targetConstraintHuman) {
+        return {
+            key: targetConstraintKey.valueId,
+            severityCode: targetConstraintSeverity.valueCode,
+            valueExpression: targetConstraintExpression.valueExpression,
+            human: targetConstraintHuman.valueString,
+            location: hasTargetConstraintLocation === null || hasTargetConstraintLocation === void 0 ? void 0 : hasTargetConstraintLocation.valueString
+        };
+    }
+    return null;
+}
+export function extractTargetConstraints(questionnaire) {
+    if (!questionnaire.extension || questionnaire.extension.length === 0) {
+        return {};
+    }
+    const targetConstraints = {};
+    for (const ext of questionnaire.extension) {
+        const targetConstraint = constructTargetConstraint(ext);
+        if (targetConstraint === null || targetConstraint === void 0 ? void 0 : targetConstraint.key) {
+            targetConstraints[targetConstraint === null || targetConstraint === void 0 ? void 0 : targetConstraint.key] = targetConstraint;
+        }
+    }
+    return targetConstraints;
+}
+//# sourceMappingURL=extractTargetConstraint.js.map

package/lib/utils/questionnaireStoreUtils/extractTargetConstraint.js.map

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package/lib/utils/questionnaireStoreUtils/extractVariables.d.ts

@@ -0,0 +1,15 @@
+import type { Expression, Extension, Questionnaire } from 'fhir/r4';
+import type { Variables } from '../../interfaces/variables.interface';
+export declare function extractQuestionnaireLevelVariables(questionnaire: Questionnaire): Variables;
+/**
+ * Get fhirpath variables from an array of extensions
+ *
+ * @author Sean Fong
+ */
+export declare function getFhirPathVariables(extensions: Extension[]): Expression[];
+/**
+ * Get x-fhir-query variables from an array of extensions
+ *
+ * @author Sean Fong
+ */
+export declare function getXFhirQueryVariables(extensions: Extension[]): Expression[];

package/lib/utils/questionnaireStoreUtils/extractVariables.js

@@ -0,0 +1,63 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+export function extractQuestionnaireLevelVariables(questionnaire) {
+    const variables = { fhirPathVariables: {}, xFhirQueryVariables: {} };
+    variables.fhirPathVariables['QuestionnaireLevel'] = [];
+    if (!questionnaire.extension || questionnaire.extension.length === 0) {
+        return variables;
+    }
+    variables.fhirPathVariables['QuestionnaireLevel'] = getFhirPathVariables(questionnaire.extension);
+    for (const exp of getXFhirQueryVariables(questionnaire.extension)) {
+        if (exp.name) {
+            variables.xFhirQueryVariables[exp.name] = {
+                valueExpression: exp
+            };
+        }
+    }
+    return variables;
+}
+/**
+ * Get fhirpath variables from an array of extensions
+ *
+ * @author Sean Fong
+ */
+export function getFhirPathVariables(extensions) {
+    return (extensions
+        .filter((extension) => {
+        var _a;
+        return extension.url === 'http://hl7.org/fhir/StructureDefinition/variable' &&
+            ((_a = extension.valueExpression) === null || _a === void 0 ? void 0 : _a.language) === 'text/fhirpath';
+    })
+        // eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+        .map((extension) => extension.valueExpression));
+}
+/**
+ * Get x-fhir-query variables from an array of extensions
+ *
+ * @author Sean Fong
+ */
+export function getXFhirQueryVariables(extensions) {
+    return (extensions
+        .filter((extension) => {
+        var _a;
+        return extension.url === 'http://hl7.org/fhir/StructureDefinition/variable' &&
+            ((_a = extension.valueExpression) === null || _a === void 0 ? void 0 : _a.language) === 'application/x-fhir-query';
+    })
+        // eslint-disable-next-line @typescript-eslint/no-non-null-assertion
+        .map((extension) => extension.valueExpression));
+}
+//# sourceMappingURL=extractVariables.js.map

package/lib/utils/questionnaireStoreUtils/extractVariables.js.map

@@ -0,0 +1 @@
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package/lib/utils/questionnaireStoreUtils/insertAnswerOptions.d.ts

@@ -0,0 +1,7 @@
+import type { Questionnaire, QuestionnaireItemAnswerOption } from 'fhir/r4';
+/**
+ * Filter x-fhir-query variables from questionnaire's extensions needed for population
+ *
+ * @author Sean Fong
+ */
+export declare function insertCompleteAnswerOptionsIntoQuestionnaire(questionnaire: Questionnaire, completeAnswerOptions: Record<string, QuestionnaireItemAnswerOption[]>): Questionnaire;

package/lib/utils/questionnaireStoreUtils/insertAnswerOptions.js

@@ -0,0 +1,44 @@
+/*
+ * Copyright 2024 Commonwealth Scientific and Industrial Research
+ * Organisation (CSIRO) ABN 41 687 119 230.
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+/**
+ * Filter x-fhir-query variables from questionnaire's extensions needed for population
+ *
+ * @author Sean Fong
+ */
+export function insertCompleteAnswerOptionsIntoQuestionnaire(questionnaire, completeAnswerOptions) {
+    if (questionnaire.item && questionnaire.item.length > 0) {
+        for (const qItem of questionnaire.item) {
+            insertCompleteAnswerOptionsRecursive(qItem, completeAnswerOptions);
+        }
+    }
+    return questionnaire;
+}
+function insertCompleteAnswerOptionsRecursive(qItem, completeAnswerOptions) {
+    if (qItem.item) {
+        for (const childItem of qItem.item) {
+            insertCompleteAnswerOptionsRecursive(childItem, completeAnswerOptions);
+        }
+    }
+    if (qItem.answerOption) {
+        const options = completeAnswerOptions[qItem.linkId];
+        if (options) {
+            qItem.answerOption = options;
+        }
+    }
+    return;
+}
+//# sourceMappingURL=insertAnswerOptions.js.map

package/lib/utils/questionnaireStoreUtils/insertAnswerOptions.js.map

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package/lib/utils/questionnaireStoreUtils/resolveValueSets.d.ts

@@ -0,0 +1,7 @@
+import type { Variables } from '../../interfaces/variables.interface';
+import type { ValueSetPromise } from '../../interfaces/valueSet.interface';
+import type { Coding } from 'fhir/r4';
+export declare function resolveValueSets(variables: Variables, valueSetPromises: Record<string, ValueSetPromise>, cachedValueSetCodings: Record<string, Coding[]>, terminologyServerUrl: string): Promise<{
+    variables: Variables;
+    cachedValueSetCodings: Record<string, Coding[]>;
+}>;