@abi-software/scaffoldvuer 1.15.6 → 1.16.0-beta.0

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@abi-software/scaffoldvuer",
-  "version": "1.15.6",
+  "version": "1.16.0-beta.0",
   "license": "Apache-2.0",
   "repository": {
     "type": "git",
@@ -41,7 +41,7 @@
     "*.js"
   ],
   "dependencies": {
-    "@abi-software/map-utilities": "1.8.3",
+    "@abi-software/map-utilities": "1.8.2",
     "@abi-software/sparc-annotation": "^0.3.2",
     "@abi-software/svg-sprite": "1.0.3",
     "@element-plus/icons-vue": "^2.3.1",
@@ -53,7 +53,7 @@
     "unplugin-vue-components": "^0.26.0",
     "vue": "^3.4.21",
     "vue-router": "^4.2.5",
-    "zincjs": "1.19.0"
+    "zincjs": "^1.19.2"
   },
   "devDependencies": {
     "@babel/eslint-parser": "^7.28.0",

package/src/App.vue

@@ -255,6 +255,11 @@
                   Arm slides
                 </el-button>
               </el-col>
+              <el-col :span="auto">
+                <el-button size="small" @click="multipleNifti()">
+                  Time x Nifti
+                </el-button>
+              </el-col>
             </el-row>
             <el-row :gutter="20" justify="center" align="middle">
               <el-col :span="auto">
@@ -321,6 +326,7 @@
 <script>
 /* eslint-disable no-alert, no-console */
 import { AnnotationService } from '@abi-software/sparc-annotation'
+import { ElMessage } from 'element-plus';
 import { markRaw, shallowRef } from 'vue';
 import { ScaffoldVuer } from "./components/index.js";
 import DropZone from "./app/DropZone.vue";
@@ -598,6 +604,21 @@ export default {
       this.$refs.scaffold.clearScene();
       testSlides(this.$refs.scaffold, texture_prefix);
     },
+    multipleNifti: async function () {
+      const urls = [
+        "https://mapcore-bucket1.s3.us-west-2.amazonaws.com/digital_twins/080626-demo/downsample_phase_1.nii.gz",
+        "https://mapcore-bucket1.s3.us-west-2.amazonaws.com/digital_twins/080626-demo/downsample_phase_3.nii.gz",
+        "https://mapcore-bucket1.s3.us-west-2.amazonaws.com/digital_twins/080626-demo/downsample_phase_5.nii.gz"
+      ]
+      const newTexture = await this.$refs.scaffold.readNIFTIFromSource(urls, true, this.maskUrl);
+      newTexture.timeEnabled = true;
+      newTexture.setIsPickable(false);
+      const scene = this.$refs.scaffold.$module.scene;
+      newTexture.setBrightness(0.38);
+      newTexture.setContrast(3.5);
+      scene.addZincObject(newTexture);
+      console.log(newTexture)
+    },
     saveSettings: function () {
       this.sceneSettings.push(this.$refs.scaffold.getState());
     },

package/src/components/ScaffoldVuer.vue

@@ -454,6 +454,7 @@ import {
 } from '@element-plus/icons-vue'
 import PrimitiveControls from "./PrimitiveControls.vue";
 import ScaffoldOverlay from "./ScaffoldOverlay.vue";
+import { readNIFTIFromSource } from "../scripts/niftiHelper.js"
 import ScaffoldTooltip from "./ScaffoldTooltip.vue";
 import ScaffoldTreeControls from "./ScaffoldTreeControls.vue";
 import { MapSvgIcon, MapSvgSpriteColor } from "@abi-software/svg-sprite";
@@ -3131,6 +3132,10 @@ export default {
         this.setMarkerModeForObjectsWithName(key, value, "on");
       }
     },
+    readNIFTIFromSource: async function(urls, useHeaderInfo, maskURL) {
+      const newTexture = await readNIFTIFromSource(urls, useHeaderInfo, maskURL);
+      return newTexture;
+    },
   },
 };
 </script>

package/src/scripts/niftiHelper.js

@@ -6,7 +6,7 @@ import {
 
 const options = {
   hideWhitePixel: false,
-  hideBlackPixel: true,
+  hideBlackPixel: false,
   keepScalePosition: true,
   filterByValue: true,
   timeEnabled: true,