@abi-software/mapintegratedvuer 1.22.0 → 1.23.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1,5 +1,5 @@
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- import { T as e, _ as t, b as n } from "./connectivities-Br3MpoAv.js";
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- import { t as r } from "./ContentMixin-B-O_IwPg.js";
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+ import { C as e, _ as t, b as n } from "./connectivities-DhBMlBSj.js";
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+ import { t as r } from "./ContentMixin-4t04VWoF.js";
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  import { createElementBlock as i, createVNode as a, openBlock as o, resolveComponent as s } from "vue";
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  //#region src/components/viewers/ConnectivityGraph.vue
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  var c = {
@@ -1,4 +1,4 @@
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- import { O as e, b as t, i as n, n as r, r as i, s as a, t as o, u as s, v as c, w as l, y as u } from "./connectivities-Br3MpoAv.js";
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+ import { N as e, O as t, b as n, i as r, n as i, r as a, s as o, t as s, u as c, v as l, y as u } from "./connectivities-DhBMlBSj.js";
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  import { markRaw as d } from "vue";
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  import { mapStores as f } from "pinia";
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  //#region node_modules/@abi-software/flatmapvuer/src/services/flatmapQueries.js
@@ -34,7 +34,7 @@ var p = function(e) {
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  return i < a ? -1 : +(i > a);
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  }, y = function() {
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  this.initialise = function(e) {
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- this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.hasSingleConnectivityList = !1, this.rawURLs = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "map", this.noMapConnectivity = !1;
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+ this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.hasSingleConnectivityList = !1, this.rawURLs = [], this.expertConsultants = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "map", this.noMapConnectivity = !1;
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  }, this.createTooltipData = async function(e, t) {
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  let n;
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  n = t.feature.hyperlinks && t.feature.hyperlinks.length > 0 ? t.feature.hyperlinks : this.rawURLs;
@@ -65,6 +65,7 @@ var p = function(e) {
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  title: t.label,
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  featureId: t.resource,
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  hyperlinks: n,
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+ "expert-consultants": this.expertConsultants,
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  provenanceTaxonomy: t.provenanceTaxonomy,
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  provenanceTaxonomyLabel: r,
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  connectivitySource: this.connectivitySource,
@@ -129,29 +130,29 @@ var p = function(e) {
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  }, this.retrieveFlatmapKnowledgeForEvent = async function(e, t) {
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  this.controller && this.controller.abort(), this.controller = new AbortController();
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  let n = t.resource;
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- if (this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.rawURLs = [], !n || n.length === 0 || !n[0]) return;
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+ if (this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.rawURLs = [], this.expertConsultants = [], !n || n.length === 0 || !n[0]) return;
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  let r = await this.queryForConnectivityNew(e, n[0]);
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  return await Promise.all([r]);
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- }, this.queryForConnectivityNew = async function(e, t, n = "map", r = !0) {
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- let i = /^sckan-(\d{4})/.exec(e.knowledgeSource || ""), a = (i ? Number(i[1]) : 0) >= 2026, o = e.mapMetadata.uuid, s = this.flatmapAPI;
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- return this.connectivitySource = a ? "sckan" : n, a && (this.singleConnectivityList = await l(s, o, t)), new Promise((n) => {
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- (this.connectivitySource === "map" ? this.queryMapConnectivity(e.mapMetadata.uuid, t) : e.queryKnowledge(t)).then((i) => {
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- if (this.checkConnectivityExists(i)) {
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+ }, this.queryForConnectivityNew = async function(e, n, r = "map", i = !0) {
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+ let a = /^sckan-(\d{4})/.exec(e.knowledgeSource || ""), o = (a ? Number(a[1]) : 0) >= 2026, s = e.mapMetadata.uuid, c = this.flatmapAPI;
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+ return this.connectivitySource = o ? "sckan" : r, o && (this.singleConnectivityList = await t(c, s, n)), new Promise((t) => {
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+ (this.connectivitySource === "map" ? this.queryMapConnectivity(e.mapMetadata.uuid, n) : e.queryKnowledge(n)).then((r) => {
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+ if (this.checkConnectivityExists(r)) {
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  this.connectivitySource === "map" && (this.noMapConnectivity = !1);
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- let t = i;
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- r ? this.processConnectivity(e, t).then((e) => {
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- i.references && (this.rawURLs = [...i.references]), n(e);
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- }) : n(t);
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- } else this.connectivitySource === "map" ? (this.connectivitySource = "sckan", this.noMapConnectivity = !0, e.queryKnowledge(t).then((t) => {
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- if (this.checkConnectivityExists(t)) {
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- let i = t;
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- r ? this.processConnectivity(e, i).then((e) => {
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- t.references && (this.rawURLs = [...t.references]), n(e);
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- }) : n(i);
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- } else n(!1);
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- }).catch(() => n(!1))) : n(!1);
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+ let n = r;
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+ i ? this.processConnectivity(e, n).then((e) => {
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+ r.references && (this.rawURLs = [...r.references]), r["expert-consultants"] && (this.expertConsultants = [...r["expert-consultants"]]), t(e);
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+ }) : t(n);
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+ } else this.connectivitySource === "map" ? (this.connectivitySource = "sckan", this.noMapConnectivity = !0, e.queryKnowledge(n).then((n) => {
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+ if (this.checkConnectivityExists(n)) {
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+ let r = n;
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+ i ? this.processConnectivity(e, r).then((e) => {
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+ n.references && (this.rawURLs = [...n.references]), n["expert-consultants"] && (this.expertConsultants = [...n["expert-consultants"]]), t(e);
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+ }) : t(r);
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+ } else t(!1);
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+ }).catch(() => t(!1))) : t(!1);
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  }).catch((e) => {
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- e.name === "AbortError" || console.warn(`Unable to get the knowledge for the entity ${t}.`), n(!1);
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+ e.name === "AbortError" || console.warn(`Unable to get the knowledge for the entity ${n}.`), t(!1);
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  });
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  });
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  }, this.queryMapConnectivity = async function(e, t) {
@@ -1229,7 +1230,7 @@ var w = {
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  showIdInTooltip: { default: !0 }
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  },
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  computed: {
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- ...f(i, c, r, o),
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+ ...f(a, l, i, s),
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  idNamePair() {
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  return this.splitFlowStore.idNamePair;
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  },
@@ -1277,7 +1278,7 @@ var w = {
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  },
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  getState: function() {},
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  openMap: function(e) {
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- t.emit("OpenNewMap", e), this.trackOpenMap(`open_new_${e}_map`);
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+ n.emit("OpenNewMap", e), this.trackOpenMap(`open_new_${e}_map`);
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  },
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  onMapmanagerLoaded: function(e) {
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  this.settingsStore.updateMapManager(e);
@@ -1301,16 +1302,16 @@ var w = {
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  return !1;
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  },
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  searchSuggestions: function() {},
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- resourceSelected: function(e, n) {
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- let r = n[0];
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+ resourceSelected: function(e, t) {
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+ let r = t[0];
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  if (this.resourceHasAction(r)) {
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- t.emit("PopoverActionClick", r);
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+ n.emit("PopoverActionClick", r);
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  return;
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  }
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  let i, a = !1, o = {
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  paneIndex: this.entry.id,
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  type: e,
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- resource: n,
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+ resource: t,
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  internalName: void 0,
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  eventType: void 0
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  };
@@ -1346,7 +1347,7 @@ var w = {
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  type: "Facet",
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  facets: [C(r.data.id)]
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  })), o.eventType = "selected", a = !0);
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- i && t.emit("PopoverActionClick", i), a && this.$emit("resource-selected", o);
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+ i && n.emit("PopoverActionClick", i), a && this.$emit("resource-selected", o);
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  },
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  resourceHasAction: function(e) {
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  return e && (e.type === "URL" || e.type === "Search" || e.type === "Neuron Search" || e.type == "Facet" || e.type == "Facets");
@@ -1480,26 +1481,26 @@ var w = {
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  }
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  },
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  onAnnotationOpen: function(e) {
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- t.emit("annotation-open", e);
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+ n.emit("annotation-open", e);
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  },
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  onAnnotationClose: function() {
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- t.emit("sidebar-annotation-close");
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+ n.emit("sidebar-annotation-close");
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  },
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  updateOfflineAnnotationEnabled: function(e) {
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- t.emit("update-offline-annotation-enabled", e);
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+ n.emit("update-offline-annotation-enabled", e);
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  },
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  onConnectivityInfoOpen: function(e) {
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- t.emit("connectivity-info-open", e);
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+ n.emit("connectivity-info-open", e);
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  },
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  onConnectivityError: function(e) {
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- t.emit("connectivity-error", e);
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+ n.emit("connectivity-error", e);
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  },
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  onConnectivityInfoClose: function() {
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- t.emit("connectivity-info-close");
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+ n.emit("connectivity-info-close");
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  },
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  onSidebarAnnotationClose: function() {},
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  onNeuronConnectionFeatureClick: function(e) {
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- t.emit("neuron-connection-feature-click", e);
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+ n.emit("neuron-connection-feature-click", e);
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  },
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  showConnectivity: function() {},
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  showConnectivityTooltips: function() {},
@@ -1545,28 +1546,28 @@ var w = {
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  };
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  },
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  loadConnectivityExplorerConfig: async function(e) {
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- let r = e.mapImp, i = n(r), o = e.mockup ? r.resource : r.uuid, s = [];
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+ let t = e.mapImp, i = r(t), a = e.mockup ? t.resource : t.uuid, s = [];
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  if (!this.connectivityKnowledge[i]) {
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  this.flatmapQueries = d(new y()), this.flatmapQueries.initialise(this.flatmapAPI);
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- let e = await a(r, this.flatmapQueries);
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+ let e = await o(t, this.flatmapQueries);
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  this.connectivityKnowledge[i] = e.filter((e) => e.connectivity?.length).sort((e, t) => e.label.localeCompare(t.label));
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  }
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- if (!this.connectivityKnowledge[o]) {
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- let e = r.pathways?.paths || {};
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- this.connectivityKnowledge[o] = this.connectivityKnowledge[i].filter((t) => t.id in e);
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+ if (!this.connectivityKnowledge[a]) {
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+ let e = t.pathways?.paths || {};
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+ this.connectivityKnowledge[a] = this.connectivityKnowledge[i].filter((t) => t.id in e);
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  }
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- if (!this.connectivityFilterOptions[o] && !e.mockup && (this.connectivityFilterOptions[o] = await e.getFilterOptions(r, this.connectivityKnowledge[o])), e.mockup) {
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- let t = e.getTermNerveMaps() || {}, n = JSON.parse(JSON.stringify(this.connectivityKnowledge[o]));
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- this.connectivityKnowledge[o] = n.map((e) => {
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- let n = e;
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+ if (!this.connectivityFilterOptions[a] && !e.mockup && (this.connectivityFilterOptions[a] = await e.getFilterOptions(t, this.connectivityKnowledge[a])), e.mockup) {
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+ let n = e.getTermNerveMaps() || {}, r = JSON.parse(JSON.stringify(this.connectivityKnowledge[a]));
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+ this.connectivityKnowledge[a] = r.map((e) => {
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+ let t = e;
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  if (e.nerves?.length) {
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- let r = e.nerves.flat(Infinity).reduce((e, n) => (n in t && e.push(t[n]), e), []);
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- r?.length && (s.push(...r), n["nerve-label"] = r.sort((e, t) => e.nerve.localeCompare(t.nerve)));
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+ let r = e.nerves.flat(Infinity).reduce((e, t) => (t in n && e.push(n[t]), e), []);
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+ r?.length && (s.push(...r), t["nerve-label"] = r.sort((e, t) => e.nerve.localeCompare(t.nerve)));
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  }
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- return n;
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- }).filter((e) => e["nerve-label"]), this.connectivityFilterOptions[o] || (this.connectivityFilterOptions[o] = await e.getFilterOptions(r, this.connectivityKnowledge[o])), s = s.map((e) => e.nerve.toLowerCase());
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- let i = JSON.parse(JSON.stringify(this.connectivityFilterOptions[o]));
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- this.connectivityFilterOptions[o] = i.map((e) => {
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+ return t;
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+ }).filter((e) => e["nerve-label"]), this.connectivityFilterOptions[a] || (this.connectivityFilterOptions[a] = await e.getFilterOptions(t, this.connectivityKnowledge[a])), s = s.map((e) => e.nerve.toLowerCase());
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+ let i = JSON.parse(JSON.stringify(this.connectivityFilterOptions[a]));
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+ this.connectivityFilterOptions[a] = i.map((e) => {
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  if (e.key === "scaffold.connectivity.nerve") {
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  let t = e.children.filter((e) => s.includes(e.label.toLowerCase()));
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  return {
@@ -1576,8 +1577,8 @@ var w = {
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  }
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  return e;
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  });
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- } else this.connectivityFilterSources[o] || (this.connectivityFilterSources[o] = e.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources);
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- this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), t.emit("species-layout-connectivity-update");
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+ } else this.connectivityFilterSources[a] || (this.connectivityFilterSources[a] = e.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources);
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+ this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), n.emit("species-layout-connectivity-update");
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  },
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  knowledgeTooltipQuery: async function(e) {
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  await this.flatmapQueries.retrieveFlatmapKnowledgeForEvent(this.flatmapService.mapImp, { resource: [e.id] });
@@ -1587,21 +1588,21 @@ var w = {
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  provenanceTaxonomy: e.taxons,
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  feature: []
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  });
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- return t.knowledgeSource = n(this.flatmapService.mapImp), t.mapId = this.flatmapService.mapImp.mapMetadata.id, t.mapuuid = this.flatmapService.mapImp.mapMetadata.uuid, t["nerve-label"] = e["nerve-label"], t.ready = !0, t;
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+ return t.knowledgeSource = r(this.flatmapService.mapImp), t.mapId = this.flatmapService.mapImp.mapMetadata.id, t.mapuuid = this.flatmapService.mapImp.mapMetadata.uuid, t["nerve-label"] = e["nerve-label"], t.ready = !0, t;
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  },
1592
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  getKnowledgeTooltip: async function(e) {
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  this.tooltipEntry = [], e.data.forEach((e) => this.tooltipEntry.push({
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  title: e.label,
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  featureId: [e.id],
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  ready: !1
1597
- })), t.emit("connectivity-info-open", this.tooltipEntry);
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- let n = [];
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- for (let t = 0; t < e.data.length; t++) n.push(await this.knowledgeTooltipQuery(e.data[t]));
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- this.tooltipEntry = await Promise.all(n), this.tooltipEntry.map((e) => e.featureId[0]).length > 0 && t.emit("connectivity-info-open", this.tooltipEntry);
1598
+ })), n.emit("connectivity-info-open", this.tooltipEntry);
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+ let t = [];
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+ for (let n = 0; n < e.data.length; n++) t.push(await this.knowledgeTooltipQuery(e.data[n]));
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+ this.tooltipEntry = await Promise.all(t), this.tooltipEntry.map((e) => e.featureId[0]).length > 0 && n.emit("connectivity-info-open", this.tooltipEntry);
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  },
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- changeConnectivitySource: async function(e, n) {
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+ changeConnectivitySource: async function(e, t) {
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  let { entry: r, connectivitySource: i } = e, a = this?.flatmapService?.mapImp?.mapMetadata.uuid;
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- n.includes(a) || (n.push(a), await this.flatmapQueries.queryForConnectivityNew(this.flatmapService.mapImp, r.featureId[0], i), this.tooltipEntry = this.tooltipEntry.map((e) => e.featureId[0] === r.featureId[0] ? this.flatmapQueries.updateTooltipData(e) : e), t.emit("connectivity-info-open", this.tooltipEntry));
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+ t.includes(a) || (t.push(a), await this.flatmapQueries.queryForConnectivityNew(this.flatmapService.mapImp, r.featureId[0], i), this.tooltipEntry = this.tooltipEntry.map((e) => e.featureId[0] === r.featureId[0] ? this.flatmapQueries.updateTooltipData(e) : e), n.emit("connectivity-info-open", this.tooltipEntry));
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  },
1606
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  trackEvent: function(e) {
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  u.sendEvent(e);
@@ -1630,7 +1631,7 @@ var w = {
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  data: function() {
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  return {
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  apiLocation: void 0,
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- activeSpecies: s,
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+ activeSpecies: c,
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  scaffoldCamera: void 0,
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  mainStyle: {
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  height: this.entry.datasetTitle ? "calc(100% - 30px)" : "100%",
@@ -1,4 +1,4 @@
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- import { v as e } from "./connectivities-Br3MpoAv.js";
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+ import { v as e } from "./connectivities-DhBMlBSj.js";
2
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  import { mapStores as t } from "pinia";
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  //#region src/mixins/DynamicMarkerMixin.js
4
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  var n = function(e) {
@@ -1,7 +1,7 @@
1
- import { C as e, _ as t, b as n, y as r } from "./connectivities-Br3MpoAv.js";
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+ import { S as e, _ as t, b as n, y as r } from "./connectivities-DhBMlBSj.js";
2
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  import "./mapintegratedvuer.js";
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- import { t as i } from "./ContentMixin-B-O_IwPg.js";
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- import { t as a } from "./DynamicMarkerMixin-B9iqtP_f.js";
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+ import { t as i } from "./ContentMixin-4t04VWoF.js";
4
+ import { t as a } from "./DynamicMarkerMixin-tATj70ym.js";
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  import { createBlock as o, createCommentVNode as s, createElementBlock as c, createVNode as l, openBlock as u, resolveComponent as d } from "vue";
6
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  import { FlatmapVuer as f } from "@abi-software/flatmapvuer";
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  import "@abi-software/flatmapvuer/dist/style.css";
@@ -1,5 +1,5 @@
1
- import { _ as e } from "./connectivities-Br3MpoAv.js";
2
- import { t } from "./ContentMixin-B-O_IwPg.js";
1
+ import { _ as e } from "./connectivities-DhBMlBSj.js";
2
+ import { t } from "./ContentMixin-4t04VWoF.js";
3
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  import { createElementBlock as n, createElementVNode as r, openBlock as i } from "vue";
4
4
  //#region src/components/viewers/Iframe.vue
5
5
  var a = {
@@ -1,7 +1,7 @@
1
- import { C as e, _ as t, b as n, c as r, u as i, y as a } from "./connectivities-Br3MpoAv.js";
1
+ import { S as e, _ as t, b as n, c as r, u as i, y as a } from "./connectivities-DhBMlBSj.js";
2
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  import "./mapintegratedvuer.js";
3
- import { t as o } from "./ContentMixin-B-O_IwPg.js";
4
- import { t as s } from "./DynamicMarkerMixin-B9iqtP_f.js";
3
+ import { t as o } from "./ContentMixin-4t04VWoF.js";
4
+ import { t as s } from "./DynamicMarkerMixin-tATj70ym.js";
5
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  import { createBlock as c, createCommentVNode as l, createElementBlock as u, createVNode as d, openBlock as f, resolveComponent as p } from "vue";
6
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  import { MultiFlatmapVuer as m } from "@abi-software/flatmapvuer";
7
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  import "@abi-software/flatmapvuer/dist/style.css";
@@ -1,5 +1,5 @@
1
- import { _ as e } from "./connectivities-Br3MpoAv.js";
2
- import { t } from "./ContentMixin-B-O_IwPg.js";
1
+ import { _ as e } from "./connectivities-DhBMlBSj.js";
2
+ import { t } from "./ContentMixin-4t04VWoF.js";
3
3
  import { createBlock as n, openBlock as r, resolveComponent as i } from "vue";
4
4
  import { PlotVuer as a } from "@abi-software/plotvuer";
5
5
  import "@abi-software/plotvuer/dist/style.css";
@@ -1,6 +1,6 @@
1
- import { C as e, _ as t, a as n, b as r, o as i } from "./connectivities-Br3MpoAv.js";
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+ import { S as e, _ as t, a as n, b as r, o as i } from "./connectivities-DhBMlBSj.js";
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  import "./mapintegratedvuer.js";
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- import { t as a } from "./ContentMixin-B-O_IwPg.js";
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+ import { t as a } from "./ContentMixin-4t04VWoF.js";
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  import { createBlock as o, createCommentVNode as s, createElementBlock as c, markRaw as l, openBlock as u, resolveComponent as d } from "vue";
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  import { ScaffoldVuer as f } from "@abi-software/scaffoldvuer";
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  import "@abi-software/scaffoldvuer/dist/style.css";
@@ -0,0 +1,32 @@
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+ import { _ as e } from "./connectivities-DhBMlBSj.js";
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+ import { t } from "./ContentMixin-4t04VWoF.js";
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+ import { createBlock as n, createElementBlock as r, openBlock as i, resolveComponent as a } from "vue";
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+ import { SimulationVuer as o } from "@abi-software/simulationvuer";
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+ import "@abi-software/simulationvuer/dist/style.css";
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+ //#region src/components/viewers/Simulation.vue
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+ var s = {
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+ name: "Simulation",
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+ mixins: [t],
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+ components: { SimulationVuer: o },
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+ data: function() {
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+ return { isCrossOriginIsolated: window.crossOriginIsolated === !0 };
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+ },
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+ computed: { id: function() {
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+ return this.entry.resource ? this.entry.resource : this.entry.discoverId;
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+ } }
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+ }, c = {
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+ key: 1,
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+ class: "simulation-unsupported"
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+ };
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+ function l(e, t, o, s, l, u) {
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+ let d = a("SimulationVuer");
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+ return e.isCrossOriginIsolated ? (i(), n(d, {
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+ key: 0,
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+ apiLocation: e.apiLocation,
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+ id: u.id,
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+ ref: "simulation"
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+ }, null, 8, ["apiLocation", "id"])) : (i(), r("div", c, " Simulations require a cross-origin isolated page (for SharedArrayBuffer support). This browser or host is not configured for it. "));
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+ }
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+ var u = /*#__PURE__*/ e(s, [["render", l], ["__scopeId", "data-v-627e2ba4"]]);
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+ //#endregion
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+ export { u as default };
@@ -35799,4 +35799,4 @@ var oW = _e("connectivities", {
35799
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  }
35800
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  });
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  //#endregion
35802
- export { He as $, uU as A, De as B, RH as C, ry as D, fU as E, be as F, je as G, Oe as H, xe as I, Pe as J, Me as K, Se as L, hy as M, SV as N, wU as O, ye as P, Be as Q, we as R, qV as S, aV as T, ke as U, Ee as V, Ae as W, Re as X, Le as Y, ze as Z, kU as _, HU as a, Xe as at, EU as b, FU as c, IU as d, Ue as et, RU as f, zU as g, NU as h, UU as i, Je as it, xy as j, aU as k, PU as l, jU as m, iW as n, Ge as nt, VU as o, Ye as ot, MU as p, Ne as q, YU as r, qe as rt, GU as s, oW as t, We as tt, AU as u, OU as v, cU as w, pU as x, DU as y, Te as z };
35802
+ export { He as $, pU as A, De as B, aV as C, aU as D, fU as E, be as F, je as G, Oe as H, xe as I, Pe as J, Me as K, Se as L, SV as M, wU as N, cU as O, ye as P, Be as Q, we as R, RH as S, uU as T, ke as U, Ee as V, Ae as W, Re as X, Le as Y, ze as Z, kU as _, HU as a, Xe as at, EU as b, FU as c, IU as d, Ue as et, RU as f, zU as g, NU as h, UU as i, Je as it, hy as j, xy as k, PU as l, jU as m, iW as n, Ge as nt, VU as o, Ye as ot, MU as p, Ne as q, YU as r, qe as rt, GU as s, oW as t, We as tt, AU as u, OU as v, ry as w, qV as x, DU as y, Te as z };