@abi-software/mapintegratedvuer 1.17.1 → 1.17.3-simulation.1

package/dist/{Iframe-ByYxT4Yq.js → Iframe-CCEA3d9c.js}

@@ -1,6 +1,6 @@
-import { C as r } from "./ContentMixin-Djmb_gqk.js";
+import { C as r } from "./ContentMixin-DIqgKIz6.js";
 import { openBlock as o, createElementBlock as t, createElementVNode as a } from "vue";
-import { _ as s } from "./index-CwfUgFL1.js";
+import { _ as s } from "./index-_b4VBGHk.js";
 const n = {
   name: "Iframe",
   mixins: [r]

package/dist/{MultiFlatmap-DSkdlRiS.js → MultiFlatmap-Cuke1uNp.js}

@@ -1,6 +1,6 @@
-import { _ as c, z as h, E as r, T as l, a as g } from "./index-CwfUgFL1.js";
-import { C as M } from "./ContentMixin-Djmb_gqk.js";
-import { D as y } from "./style-Czqe2bTf.js";
+import { _ as c, z as h, E as r, T as l, b as g } from "./index-_b4VBGHk.js";
+import { C as M } from "./ContentMixin-DIqgKIz6.js";
+import { D as y } from "./style-CM86xE3J.js";
 import { MultiFlatmapVuer as C } from "@abi-software/flatmapvuer";
 import { resolveComponent as p, openBlock as m, createElementBlock as v, createVNode as I, createBlock as S, createCommentVNode as F } from "vue";
 const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><path d="M11.0748 3.25583C11.4141 2.42845 12.5859 2.42845 12.9252 3.25583L14.6493 7.45955C14.793 7.80979 15.1221 8.04889 15.4995 8.07727L20.0303 8.41798C20.922 8.48504 21.2841 9.59942 20.6021 10.1778L17.1369 13.1166C16.8482 13.3614 16.7225 13.7483 16.8122 14.1161L17.8882 18.5304C18.1 19.3992 17.152 20.0879 16.3912 19.618L12.5255 17.2305C12.2034 17.0316 11.7966 17.0316 11.4745 17.2305L7.60881 19.618C6.84796 20.0879 5.90001 19.3992 6.1118 18.5304L7.18785 14.1161C7.2775 13.7483 7.1518 13.3614 6.86309 13.1166L3.3979 10.1778C2.71588 9.59942 3.07796 8.48504 3.96971 8.41798L8.50046 8.07727C8.87794 8.04889 9.20704 7.80979 9.35068 7.45955L11.0748 3.25583Z" stroke="#000000" stroke-width="2"/></svg>', d = (e) => [

package/dist/{Plot-ymkHVq_A.js → Plot-B4oTBVAT.js}

@@ -1,7 +1,7 @@
 import { PlotVuer as o } from "@abi-software/plotvuer";
-import { C as r } from "./ContentMixin-Djmb_gqk.js";
+import { C as r } from "./ContentMixin-DIqgKIz6.js";
 import { resolveComponent as a, openBlock as n, createBlock as s } from "vue";
-import { _ as p } from "./index-CwfUgFL1.js";
+import { _ as p } from "./index-_b4VBGHk.js";
 const l = {
   name: "Plot",
   mixins: [r],

package/dist/{Scaffold-bw7posKm.js → Scaffold-Czz8X5kL.js}

@@ -1,27 +1,53 @@
-import { _ as g, z as m, E as d, g as v, b as y } from "./index-CwfUgFL1.js";
-import { C as w } from "./ContentMixin-Djmb_gqk.js";
-import { ScaffoldVuer as b } from "@abi-software/scaffoldvuer";
-import { resolveComponent as p, openBlock as u, createElementBlock as S, createVNode as M, createBlock as N, createCommentVNode as $ } from "vue";
+import { _ as p, z as m, E as c } from "./index-_b4VBGHk.js";
+import { C as v } from "./ContentMixin-DIqgKIz6.js";
+import { ScaffoldVuer as w } from "@abi-software/scaffoldvuer";
+import { resolveComponent as u, openBlock as g, createElementBlock as y, createVNode as b, createBlock as S, createCommentVNode as M } from "vue";
+async function k(e) {
+  const t = sessionStorage.getItem("flatmap-knowledge");
+  if (t) {
+    const i = JSON.parse(t).filter((s) => s.references && s.references.length).filter((s) => s.references.includes(e));
+    if (i.length)
+      return i.map((l) => l.id);
+  }
+  return [];
+}
+async function I(e, t, n) {
+  const i = `select knowledge from knowledge
+    where source="${N(e)}" and
+    knowledge like "%${t}%" order by source desc`;
+  return (await n.queryKnowledge(i)).map((a) => JSON.parse(a)).map((a) => a.id);
+}
+function N(e) {
+  return $(e.mapMetadata);
+}
+function $(e) {
+  let t = "";
+  if (e != null && e.connectivity) {
+    const n = e.connectivity;
+    "knowledge-source" in n ? t = n["knowledge-source"] : "npo" in n && (t = `${n.npo.release}-npo`);
+  }
+  return t;
+}
 const C = {
   name: "Scaffold",
-  mixins: [w],
+  mixins: [v],
   components: {
-    ScaffoldVuer: b,
+    ScaffoldVuer: w,
     HelpModeDialog: m
   },
   methods: {
     showConnectivitiesByReference: async function(e) {
       const t = sessionStorage.getItem("flatmap-knowledge");
       let n = [];
-      t ? n = await v(e) : n = await y(this.flatmapService.mapImp, e, this.flatmapService.flatmapQueries);
+      t ? n = await k(e) : n = await I(this.flatmapService.mapImp, e, this.flatmapService.flatmapQueries);
       const o = [];
-      for (const s of n) {
-        const i = this.nervesKnowledge.find((l) => l.id === s);
-        if (!i) continue;
-        const f = i["nerve-label"];
-        if (f) {
-          const l = f.flatMap((a) => a.subNerves);
-          o.push(...l);
+      for (const i of n) {
+        const s = this.nervesKnowledge.find((r) => r.id === i);
+        if (!s) continue;
+        const l = s["nerve-label"];
+        if (l) {
+          const r = l.flatMap((a) => a.subNerves);
+          o.push(...r);
         }
       }
       this.$refs.scaffold.changeHighlightedByName(o, "", !1);
@@ -37,14 +63,14 @@ const C = {
       const n = !!e;
       if (e) {
         const o = [];
-        e.OR.forEach((s) => {
-          "AND" in s && s.AND.length >= 2 && "models" in s.AND[1] && o.push(...s.AND[1].models);
+        e.OR.forEach((i) => {
+          "AND" in i && i.AND.length >= 2 && "models" in i.AND[1] && o.push(...i.AND[1].models);
         });
-        for (const s of o) {
-          const i = this.nervesKnowledge.find((f) => f.id === s);
-          if (i) {
-            const f = i["nerve-label"].map((l) => l.subNerves).flat(1 / 0);
-            t.push(...f);
+        for (const i of o) {
+          const s = this.nervesKnowledge.find((l) => l.id === i);
+          if (s) {
+            const l = s["nerve-label"].map((r) => r.subNerves).flat(1 / 0);
+            t.push(...l);
           }
         }
       }
@@ -69,41 +95,41 @@ const C = {
                 facetPropPath: "scaffold.connectivity.nerve"
               });
             else {
-              const s = o.toLowerCase();
-              let i = this.clickedObject.anatomicalId || "";
-              if (i)
+              const i = o.toLowerCase();
+              let s = this.clickedObject.anatomicalId || "";
+              if (s)
                 this.filter.push({
-                  facet: `["${i}",[]]`,
-                  facetPropPath: `flatmap.connectivity.source.${s}`,
+                  facet: `["${s}",[]]`,
+                  facetPropPath: `flatmap.connectivity.source.${i}`,
                   tagLabel: n.charAt(0).toUpperCase() + n.slice(1),
                   term: o
                 });
               else {
-                const l = this.connectivitiesStore.filterOptions[this.entry.resource].find((r) => r.key === `flatmap.connectivity.source.${s}`);
+                const r = this.connectivitiesStore.filterOptions[this.entry.resource].find((f) => f.key === `flatmap.connectivity.source.${i}`);
                 let a;
-                l == null || l.children.forEach((r) => {
-                  var c;
-                  r.label.toLowerCase() === n && (a = r), (c = r.children) == null || c.forEach((h) => {
+                r == null || r.children.forEach((f) => {
+                  var d;
+                  f.label.toLowerCase() === n && (a = f), (d = f.children) == null || d.forEach((h) => {
                     h.label.toLowerCase() === n && (a = h);
                   });
-                }), a && (i = a.key.replace(`flatmap.connectivity.source.${s}.`, ""), this.filter.push({
-                  facet: i,
-                  facetPropPath: `flatmap.connectivity.source.${s}`,
+                }), a && (s = a.key.replace(`flatmap.connectivity.source.${i}.`, ""), this.filter.push({
+                  facet: s,
+                  facetPropPath: `flatmap.connectivity.source.${i}`,
                   tagLabel: a.tagLabel,
                   term: o
                 }));
               }
             }
-            d.emit("neuron-connection-feature-click", {
+            c.emit("neuron-connection-feature-click", {
               filters: this.filter,
               search: this.filter.length ? "" : n
             });
           } else if (this.$refs.scaffold.viewingMode === "Exploration") {
-            const o = this.nervesKnowledge.filter((s) => JSON.stringify(s["nerve-label"]).includes(n));
+            const o = this.nervesKnowledge.filter((i) => JSON.stringify(i["nerve-label"]).includes(n));
             o.length && this.getKnowledgeTooltip({ data: o, type: this.entry });
           }
         }
-      } else t.length > 1 ? this.$refs.scaffold.viewingMode === "Exploration" && this.clickedObject && this.$refs.scaffold.$module.setIgnorePicking(!1) : (this.clickedObject = void 0, d.emit("connectivity-info-close"));
+      } else t.length > 1 ? this.$refs.scaffold.viewingMode === "Exploration" && this.clickedObject && this.$refs.scaffold.$module.setIgnorePicking(!1) : (this.clickedObject = void 0, c.emit("connectivity-info-close"));
     },
     onResize: function() {
       this.scaffoldCamera.onResize();
@@ -141,7 +167,7 @@ const C = {
       Array.isArray(e) ? n = e : n = [e.name], t && this.$refs.scaffold.changeActiveByName(n, "", !1), this.$refs.scaffold.viewRegion(n);
     },
     scaffoldIsReady: function() {
-      this.scaffoldLoaded = !0, this.$refs.scaffold.$module.graphicsHighlight.highlightColour = [1, 0, 1], this.visible && this.entry.rotation && this.entry.rotation, this.updateViewerSettings(), d.emit("mapLoaded", this.$refs.scaffold), setTimeout(() => {
+      this.scaffoldLoaded = !0, this.$refs.scaffold.$module.graphicsHighlight.highlightColour = [1, 0, 1], this.visible && this.entry.rotation && this.entry.rotation, this.updateViewerSettings(), c.emit("mapLoaded", this.$refs.scaffold), setTimeout(() => {
         this.setNerveGreyScale();
       }, 500);
     },
@@ -149,14 +175,14 @@ const C = {
      * Callback when the vuers emit a selected event.
      */
     scaffoldHighlighted: function(e, t) {
-      var o, s, i;
+      var o, i, s;
       const n = {
         paneIndex: this.entry.id,
         type: e,
         resource: t,
         internalName: void 0
       };
-      t && t[0] && ((((o = t[0].data) == null ? void 0 : o.id) === void 0 || ((s = t[0].data) == null ? void 0 : s.id) === "") && (t[0].data.id = (i = t[0].data) == null ? void 0 : i.group), n.internalName = t[0].data.id, n.eventType = "highlighted"), this.$emit("resource-selected", n);
+      t && t[0] && ((((o = t[0].data) == null ? void 0 : o.id) === void 0 || ((i = t[0].data) == null ? void 0 : i.id) === "") && (t[0].data.id = (s = t[0].data) == null ? void 0 : s.group), n.internalName = t[0].data.id, n.eventType = "highlighted"), this.$emit("resource-selected", n);
     },
     /**
      * Callback when the vuers emit a selected event.
@@ -225,18 +251,18 @@ const C = {
   mounted: function() {
     this.scaffoldCamera = this.$refs.scaffold.$module.scene.getZincCameraControls();
   }
-}, I = { class: "viewer-container" };
-function O(e, t, n, o, s, i) {
-  const f = p("ScaffoldVuer"), l = p("HelpModeDialog");
-  return u(), S("div", I, [
-    M(f, {
+}, O = { class: "viewer-container" };
+function L(e, t, n, o, i, s) {
+  const l = u("ScaffoldVuer"), r = u("HelpModeDialog");
+  return g(), y("div", O, [
+    b(l, {
       state: e.entry.state,
       url: e.entry.resource,
       region: e.entry.region,
-      onScaffoldSelected: t[0] || (t[0] = (a) => i.scaffoldResourceSelected(e.entry.type, a)),
-      onScaffoldHighlighted: t[1] || (t[1] = (a) => i.scaffoldHighlighted(e.entry.type, a)),
-      onScaffoldNavigated: t[2] || (t[2] = (a) => i.scaffoldNavigated(e.entry.type, a)),
-      onOnReady: i.scaffoldIsReady,
+      onScaffoldSelected: t[0] || (t[0] = (a) => s.scaffoldResourceSelected(e.entry.type, a)),
+      onScaffoldHighlighted: t[1] || (t[1] = (a) => s.scaffoldHighlighted(e.entry.type, a)),
+      onScaffoldNavigated: t[2] || (t[2] = (a) => s.scaffoldNavigated(e.entry.type, a)),
+      onOnReady: s.scaffoldIsReady,
       onOpenMap: e.openMap,
       ref: "scaffold",
       "background-toggle": !0,
@@ -253,13 +279,13 @@ function O(e, t, n, o, s, i) {
       onShownMapTooltip: e.onMapTooltipShown,
       render: e.visible,
       "display-latest-message": !0,
-      "warning-message": i.warningMessage,
+      "warning-message": s.warningMessage,
       "display-minimap": !1,
       "display-markers": !1,
       enableOpenMapUI: !0,
       "view-u-r-l": e.entry.viewUrl,
       markerCluster: !0,
-      markerLabels: i.markerLabels,
+      markerLabels: s.markerLabels,
       flatmapAPI: e.flatmapAPI,
       showLocalSettings: e.showLocalSettings,
       showOpenMapButton: e.showOpenMapButton,
@@ -268,17 +294,17 @@ function O(e, t, n, o, s, i) {
         tubeLines: e.entry.discoverId === "307" || e.entry.discoverId === 307
       }
     }, null, 8, ["state", "url", "region", "onOnReady", "onOpenMap", "helpMode", "helpModeActiveItem", "helpModeDialog", "onAnnotationOpen", "onAnnotationClose", "onUpdateOfflineAnnotationEnabled", "annotationSidebar", "onHelpModeLastItem", "onShownTooltip", "onShownMapTooltip", "render", "warning-message", "view-u-r-l", "markerLabels", "flatmapAPI", "showLocalSettings", "showOpenMapButton", "usageConfig"]),
-    e.helpMode && e.useHelpModeDialog ? (u(), N(l, {
+    e.helpMode && e.useHelpModeDialog ? (g(), S(r, {
       key: 0,
       ref: "scaffoldHelp",
       scaffoldRef: e.scaffoldRef,
       lastItem: e.helpModeLastItem,
       onShowNext: e.onHelpModeShowNext,
       onFinishHelpMode: e.onFinishHelpMode
-    }, null, 8, ["scaffoldRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : $("", !0)
+    }, null, 8, ["scaffoldRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : M("", !0)
   ]);
 }
-const H = /* @__PURE__ */ g(C, [["render", O], ["__scopeId", "data-v-5de11cee"]]);
+const H = /* @__PURE__ */ p(C, [["render", L], ["__scopeId", "data-v-5de11cee"]]);
 export {
   H as default
 };

package/dist/Simulation-BKmz8zwm.js

@@ -0,0 +1,107 @@
+import { _ as r, E as i } from "./index-_b4VBGHk.js";
+import { C as l } from "./ContentMixin-DIqgKIz6.js";
+import { SimulationVuer as d } from "@abi-software/simulationvuer";
+import { resolveComponent as u, openBlock as c, createBlock as f } from "vue";
+const h = {
+  name: "Simulation",
+  mixins: [l],
+  components: {
+    SimulationVuer: d
+  },
+  computed: {
+    id: function() {
+      return this.entry.resource ? this.entry.resource : this.entry.discoverId;
+    }
+  },
+  data: function() {
+    return {
+      columns: void 0,
+      csv: void 0,
+      fileOpened: !1
+    };
+  },
+  methods: {
+    handleDataNotification: function(t) {
+      i.emit("simulation-response", t);
+    },
+    handleDataRequest(t) {
+      this.processRequest(t);
+    },
+    handleExternalEvent(t) {
+      console.log("handleExternalEvent", t);
+    },
+    handleFileEvent(t) {
+      (t == null ? void 0 : t.type) === "opened" && this.$nextTick(() => {
+        this.fileOpened = !0, (this.entry.csv_file || this.csv_file) && this.addExternalData(
+          {
+            targetEntryId: this.entry.id,
+            action: this.entry
+          }
+        );
+      });
+    },
+    handleWindowClosed(t) {
+      var e;
+      (e = this.$refs.simulation) == null || e.removeDataSubscription(t.id);
+    },
+    processRequest: function(t) {
+      var a, n;
+      if (t.id !== "nz.ac.auckland.simulation-data-request") return;
+      if (parseInt(t.version.split(".")[0]) !== 0) {
+        console.warn("Unsupported simulation request version:", t.version);
+        return;
+      }
+      ((a = t.payload.protocol) == null ? void 0 : a.resource) === this.id && ((n = this.$refs.simulation) == null || n.addDataSubscription({
+        id: t.id,
+        version: t.version,
+        payload: {
+          windowId: t.payload.windowId,
+          ownerId: t.payload.ownerId,
+          component: t.payload.component,
+          variable: t.payload.variable,
+          withVOI: !0
+        }
+      }));
+    },
+    addExternalData: function(t) {
+      if (this.entry.id === t.targetEntryId) {
+        const e = t.action;
+        if (e.csv_file && (this.csv_file = e.csv_file, this.columns = e.columns), this.csv_file && this.fileOpened) {
+          const a = [];
+          this.columns && this.columns.forEach((n) => {
+            n.cellml_variable && n.cellml_variable !== "main/t" && a.push(n.cellml_variable);
+          }), this.$refs.simulation.addExternalData(this.csv_file, void 0, a);
+        }
+      }
+    }
+  },
+  mounted: function() {
+    i.on("simulation-external-data", this.addExternalData), i.on("simulation-data-request", this.handleDataRequest), i.on("plot-window-closed", this.handleWindowClosed), i.emit("simulation-ready", {
+      resourceId: this.id,
+      entryId: this.entry.id,
+      ready: !0
+    }), console.log(this.entry);
+  },
+  beforeUnmount: function() {
+    i.emit("simulation-ready", {
+      resourceId: this.id,
+      entryId: this.entry.id,
+      ready: !1
+    }), i.off("simulation-data-request", this.handleDataRequest), i.off("plot-window-closed", this.handleWindowClosed);
+  }
+};
+function m(t, e, a, n, p, o) {
+  const s = u("SimulationVuer");
+  return c(), f(s, {
+    apiLocation: t.apiLocation,
+    id: o.id,
+    ref: "simulation",
+    onDataNotification: o.handleDataNotification,
+    onExternalData: o.handleExternalEvent,
+    onFile: o.handleFileEvent
+  }, null, 8, ["apiLocation", "id", "onDataNotification", "onExternalData", "onFile"]);
+}
+const w = /* @__PURE__ */ r(h, [["render", m]]);
+export {
+  w as default
+};