@abi-software/mapintegratedvuer 1.14.0-beta.0 → 1.14.0

package/dist/{ContentMixin-DUtjlaOg.js → ContentMixin-CNJBk8X5.js}

@@ -1,6 +1,6 @@
 import { markRaw as y } from "vue";
-import { c as C, u as E, d as O, e as N, E as f, T as b, f as R, h as x, i as w, l as P, J as B } from "./index-Cl5VNhAK.js";
-import { mapStores as X } from "pinia";
+import { c as C, u as E, d as O, e as N, E as f, T as b, f as R, h as x, i as w, l as P, j as B, J as X } from "./index-Dj4nDRx6.js";
+import { mapStores as U } from "pinia";
 const M = function(e) {
   return e ? [...new Set(e.map((r) => JSON.stringify(r)))].map(
     (r) => JSON.parse(r)
@@ -1085,7 +1085,7 @@ const I = [
     "FMA subclasses (in human nerves)": ["FMA:6892", "FMA:6893"],
     "subclass labels": ["Right T9 grey ramus communicans", "Left T9 grey ramus communicans"]
   }
-], U = () => {
+], $ = () => {
   const e = {};
   return I.forEach((r) => {
     const t = r.nerve_id, n = r.label.toLowerCase(), a = r["subclass labels"];
@@ -1100,7 +1100,7 @@ const I = [
       };
     }
   }), e;
-}, $ = () => {
+}, H = () => {
   let e = [], r = {
     key: "scaffold.connectivity.nerve",
     label: "Nerves",
@@ -1125,10 +1125,10 @@ const I = [
   }
   return t.length && (r.children = t.sort((n, a) => n.label.localeCompare(a.label)), e.push(r)), e;
 };
-function H(e) {
+function D(e) {
   return e[0].toUpperCase() + e.substring(1);
 }
-const K = {
+const J = {
   emits: ["flatmap-provenance-ready", "resource-selected", "species-changed"],
   props: {
     /**
@@ -1147,7 +1147,7 @@ const K = {
   },
   inject: ["showGlobalSettings", "showOpenMapButton"],
   computed: {
-    ...X(C, E, O, N),
+    ...U(C, E, O, N),
     idNamePair() {
       return this.splitFlowStore.idNamePair;
     },
@@ -1284,7 +1284,7 @@ const K = {
         } else t.eventType == "mouseenter" && (i.eventType = "highlighted", a = !0);
       else e == "Scaffold" && (t && ((((l = t.data) == null ? void 0 : l.id) === void 0 || ((o = t.data) == null ? void 0 : o.id) === "") && (t.data.id = (c = t.data) == null ? void 0 : c.group), i.internalName = t.data.id, t.data.lastActionOnMarker === !0 && (n = {
         type: "Facet",
-        facets: [H(t.data.id)]
+        facets: [D(t.data.id)]
       })), i.eventType = "selected", a = !0);
       n && f.emit("PopoverActionClick", n), a && this.$emit("resource-selected", i);
     },
@@ -1536,14 +1536,14 @@ const K = {
             }
           return p;
         }
-      }, o = $();
+      }, o = H();
       return {
         mockup: !0,
         getFilterOptions: async (u, h) => {
-          const v = await B(this.flatmapAPI, u, h, void 0);
+          const v = await X(this.flatmapAPI, u, h, void 0);
           return [...o, ...v];
         },
-        getTermNerveMaps: U,
+        getTermNerveMaps: $,
         mapImp: l
       };
     },
@@ -1603,9 +1603,10 @@ const K = {
         r.push(await this.knowledgeTooltipQuery(e.data[n]));
       this.tooltipEntry = await Promise.all(r), this.tooltipEntry.map((n) => n.featureId[0]).length > 0 && f.emit("connectivity-info-open", this.tooltipEntry);
     },
-    changeConnectivitySource: async function(e) {
-      const { entry: r, connectivitySource: t } = e;
-      await this.flatmapQueries.queryForConnectivityNew(this.flatmapService.mapImp, r.featureId[0], t), this.tooltipEntry = this.tooltipEntry.map((n) => n.featureId[0] === r.featureId[0] ? this.flatmapQueries.updateTooltipData(n) : n), f.emit("connectivity-info-open", this.tooltipEntry);
+    changeConnectivitySource: async function(e, r) {
+      var i, s;
+      const { entry: t, connectivitySource: n } = e, a = (s = (i = this == null ? void 0 : this.flatmapService) == null ? void 0 : i.mapImp) == null ? void 0 : s.mapMetadata.uuid;
+      r.includes(a) || (r.push(a), await this.flatmapQueries.queryForConnectivityNew(this.flatmapService.mapImp, t.featureId[0], n), this.tooltipEntry = this.tooltipEntry.map((l) => l.featureId[0] === t.featureId[0] ? this.flatmapQueries.updateTooltipData(l) : l), f.emit("connectivity-info-open", this.tooltipEntry));
     },
     trackEvent: function(e) {
       b.sendEvent(e);
@@ -1614,7 +1615,7 @@ const K = {
   data: function() {
     return {
       apiLocation: void 0,
-      activeSpecies: "Human Male",
+      activeSpecies: B,
       scaffoldCamera: void 0,
       mainStyle: {
         height: this.entry.datasetTitle ? "calc(100% - 30px)" : "100%",
@@ -1650,5 +1651,5 @@ const K = {
   }
 };
 export {
-  K as C
+  J as C
 };

package/dist/{Flatmap-DkkEcztU.js → Flatmap-Br1QH3KB.js}

@@ -1,9 +1,9 @@
-import { _ as d, q as c, E as l, T as h } from "./index-Cl5VNhAK.js";
-import { C as u } from "./ContentMixin-DUtjlaOg.js";
-import { D as y } from "./style-DpvEBAhd.js";
+import { _ as d, q as c, E as l, T as h } from "./index-Dj4nDRx6.js";
+import { C as u } from "./ContentMixin-CNJBk8X5.js";
+import { D as y } from "./style-CwTC2nuF.js";
 import { FlatmapVuer as g } from "@abi-software/flatmapvuer";
-import { resolveComponent as r, openBlock as p, createElementBlock as M, createVNode as C, createBlock as v, createCommentVNode as S } from "vue";
-const w = {
+import { resolveComponent as r, openBlock as p, createElementBlock as M, createVNode as C, createBlock as v, createCommentVNode as I } from "vue";
+const S = {
   name: "Flatmap",
   mixins: [u, y],
   components: {
@@ -86,8 +86,11 @@ const w = {
         t && t.showConnectivitiesByReference(e);
       }
     },
-    changeConnectivitySource: function(e) {
-      this != null && this.alive && this.flatmapReady && this.$refs.multiflatmap.getCurrentFlatmap().changeConnectivitySource(e);
+    changeConnectivitySource: function(e, t) {
+      if (this != null && this.alive && this.flatmapReady) {
+        const a = this.$refs.flatmap, n = a.mapImp.mapMetadata.uuid;
+        t.includes(n) || (t.push(n), a.changeConnectivitySource(e));
+      }
     },
     zoomToFeatures: function(e, t) {
       let a = e.name;
@@ -136,10 +139,10 @@ const w = {
       return this.settingsStore.facets.species;
     }
   }
-}, I = { class: "viewer-container" };
+}, w = { class: "viewer-container" };
 function F(e, t, a, n, i, o) {
   const s = r("FlatmapVuer"), f = r("HelpModeDialog");
-  return p(), M("div", I, [
+  return p(), M("div", w, [
     C(s, {
       state: e.entry.state,
       entry: e.entry.resource,
@@ -190,10 +193,10 @@ function F(e, t, a, n, i, o) {
       lastItem: e.helpModeLastItem,
       onShowNext: e.onHelpModeShowNext,
       onFinishHelpMode: e.onFinishHelpMode
-    }, null, 8, ["flatmapRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : S("", !0)
+    }, null, 8, ["flatmapRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : I("", !0)
   ]);
 }
-const $ = /* @__PURE__ */ d(w, [["render", F], ["__scopeId", "data-v-663c1997"]]);
+const $ = /* @__PURE__ */ d(S, [["render", F], ["__scopeId", "data-v-a87dcfac"]]);
 export {
   $ as default
 };

package/dist/{Iframe-D4q2gvGG.js → Iframe-By3z2E5s.js}

@@ -1,6 +1,6 @@
-import { C as r } from "./ContentMixin-DUtjlaOg.js";
+import { C as r } from "./ContentMixin-CNJBk8X5.js";
 import { openBlock as o, createElementBlock as t, createElementVNode as a } from "vue";
-import { _ as s } from "./index-Cl5VNhAK.js";
+import { _ as s } from "./index-Dj4nDRx6.js";
 const n = {
   name: "Iframe",
   mixins: [r]

package/dist/{MultiFlatmap-EvhvF0Dr.js → MultiFlatmap-6VIoa11Z.js}

@@ -1,9 +1,9 @@
-import { _ as c, q as h, a as g, T as r, E as l } from "./index-Cl5VNhAK.js";
-import { C as M } from "./ContentMixin-DUtjlaOg.js";
-import { D as C } from "./style-DpvEBAhd.js";
+import { _ as c, q as h, a as g, T as r, E as l } from "./index-Dj4nDRx6.js";
+import { C as M } from "./ContentMixin-CNJBk8X5.js";
+import { D as C } from "./style-CwTC2nuF.js";
 import { MultiFlatmapVuer as y } from "@abi-software/flatmapvuer";
-import { resolveComponent as p, openBlock as m, createElementBlock as v, createVNode as S, createBlock as I, createCommentVNode as F } from "vue";
-const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><path d="M11.0748 3.25583C11.4141 2.42845 12.5859 2.42845 12.9252 3.25583L14.6493 7.45955C14.793 7.80979 15.1221 8.04889 15.4995 8.07727L20.0303 8.41798C20.922 8.48504 21.2841 9.59942 20.6021 10.1778L17.1369 13.1166C16.8482 13.3614 16.7225 13.7483 16.8122 14.1161L17.8882 18.5304C18.1 19.3992 17.152 20.0879 16.3912 19.618L12.5255 17.2305C12.2034 17.0316 11.7966 17.0316 11.4745 17.2305L7.60881 19.618C6.84796 20.0879 5.90001 19.3992 6.1118 18.5304L7.18785 14.1161C7.2775 13.7483 7.1518 13.3614 6.86309 13.1166L3.3979 10.1778C2.71588 9.59942 3.07796 8.48504 3.96971 8.41798L8.50046 8.07727C8.87794 8.04889 9.20704 7.80979 9.35068 7.45955L11.0748 3.25583Z" stroke="#000000" stroke-width="2"/></svg>', f = (e) => [
+import { resolveComponent as p, openBlock as m, createElementBlock as v, createVNode as I, createBlock as S, createCommentVNode as F } from "vue";
+const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><path d="M11.0748 3.25583C11.4141 2.42845 12.5859 2.42845 12.9252 3.25583L14.6493 7.45955C14.793 7.80979 15.1221 8.04889 15.4995 8.07727L20.0303 8.41798C20.922 8.48504 21.2841 9.59942 20.6021 10.1778L17.1369 13.1166C16.8482 13.3614 16.7225 13.7483 16.8122 14.1161L17.8882 18.5304C18.1 19.3992 17.152 20.0879 16.3912 19.618L12.5255 17.2305C12.2034 17.0316 11.7966 17.0316 11.4745 17.2305L7.60881 19.618C6.84796 20.0879 5.90001 19.3992 6.1118 18.5304L7.18785 14.1161C7.2775 13.7483 7.1518 13.3614 6.86309 13.1166L3.3979 10.1778C2.71588 9.59942 3.07796 8.48504 3.96971 8.41798L8.50046 8.07727C8.87794 8.04889 9.20704 7.80979 9.35068 7.45955L11.0748 3.25583Z" stroke="#000000" stroke-width="2"/></svg>', d = (e) => [
   {
     display: "Open AC Map",
     key: "AC"
@@ -30,7 +30,7 @@ const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><pa
       scaffoldResource: {},
       showStarInLegend: !1,
       speciesHasChanged: !1,
-      openMapOptions: f(),
+      openMapOptions: d(),
       zoomLevel: 6
     };
   },
@@ -108,7 +108,7 @@ const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><pa
       e && (this.flatmapMarkerUpdate(e.mapImp), this.updateViewerSettings(), this.speciesHasChanged && (this.speciesHasChanged = !1, this.$emit("species-changed", this.activeSpecies)));
     },
     flatmapChanged: async function(e) {
-      this.activeSpecies = e, this.openMapOptions = f();
+      this.activeSpecies = e, this.openMapOptions = d();
       const t = this.getFlatmapImp();
       this.updateProvCard(), t && (t.contextLost ? this.speciesHasChanged = !0 : (this.flatmapMarkerUpdate(t), this.updateViewerSettings(), this.speciesHasChanged = !1, this.$emit("species-changed", e))), r.sendEvent({
         event: "interaction_event",
@@ -193,8 +193,11 @@ const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><pa
         t && t.showConnectivitiesByReference(e);
       }
     },
-    changeConnectivitySource: function(e) {
-      this != null && this.alive && this.flatmapReady && this.$refs.multiflatmap.getCurrentFlatmap().changeConnectivitySource(e);
+    changeConnectivitySource: function(e, t) {
+      if (this != null && this.alive && this.flatmapReady) {
+        const a = this.$refs.multiflatmap.getCurrentFlatmap(), n = a.mapImp.mapMetadata.uuid;
+        t.includes(n) || (t.push(n), a.changeConnectivitySource(e));
+      }
     },
     updateViewerSettings: function() {
       const {
@@ -244,9 +247,9 @@ const w = '<svg width="72px" height="72px" viewBox="0 0 24 24" fill="yellow"><pa
   }
 }, b = { class: "viewer-container" };
 function R(e, t, a, n, i, o) {
-  const s = p("MultiFlatmapVuer"), d = p("HelpModeDialog");
+  const s = p("MultiFlatmapVuer"), f = p("HelpModeDialog");
   return m(), v("div", b, [
-    S(s, {
+    I(s, {
       availableSpecies: e.availableSpecies,
       onContextRestored: o.contextRestored,
       onFlatmapChanged: o.flatmapChanged,
@@ -290,7 +293,7 @@ function R(e, t, a, n, i, o) {
       showPathwayFilter: !1,
       onTrackEvent: e.trackEvent
     }, null, 8, ["availableSpecies", "onContextRestored", "onFlatmapChanged", "onReady", "state", "mapManager", "initial", "helpMode", "helpModeActiveItem", "helpModeDialog", "onHelpModeLastItem", "onShownTooltip", "onShownMapTooltip", "onAnnotationOpen", "onAnnotationClose", "onUpdateOfflineAnnotationEnabled", "annotationSidebar", "onConnectivityInfoOpen", "onConnectivityError", "onConnectivityInfoClose", "onNeuronConnectionFeatureClick", "connectivityInfoSidebar", "displayMinimap", "showStarInLegend", "openMapOptions", "flatmapAPI", "render", "sparcAPI", "showLocalSettings", "showOpenMapButton", "onPanZoomCallback", "onOpenMap", "onFinishHelpMode", "onPathwaySelectionChanged", "onOpenPubmedUrl", "onMapmanagerLoaded", "onTrackEvent"]),
-    e.helpMode && e.useHelpModeDialog ? (m(), I(d, {
+    e.helpMode && e.useHelpModeDialog ? (m(), S(f, {
       key: 0,
       ref: "multiflatmapHelp",
       multiflatmapRef: e.multiflatmapRef,
@@ -300,7 +303,7 @@ function R(e, t, a, n, i, o) {
     }, null, 8, ["multiflatmapRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : F("", !0)
   ]);
 }
-const E = /* @__PURE__ */ c(k, [["render", R], ["__scopeId", "data-v-804bf753"]]);
+const E = /* @__PURE__ */ c(k, [["render", R], ["__scopeId", "data-v-3d3287ed"]]);
 export {
   E as default
 };

package/dist/{Plot-DT9AD75n.js → Plot-0VRwsvjv.js}

@@ -1,7 +1,7 @@
 import { PlotVuer as o } from "@abi-software/plotvuer";
-import { C as r } from "./ContentMixin-DUtjlaOg.js";
+import { C as r } from "./ContentMixin-CNJBk8X5.js";
 import { resolveComponent as a, openBlock as n, createBlock as s } from "vue";
-import { _ as p } from "./index-Cl5VNhAK.js";
+import { _ as p } from "./index-Dj4nDRx6.js";
 const l = {
   name: "Plot",
   mixins: [r],

package/dist/{Scaffold-DHTiUuP6.js → Scaffold-du_4ru_3.js}

@@ -1,8 +1,8 @@
-import { _ as g, q as m, g as v, b as y, E as c } from "./index-Cl5VNhAK.js";
-import { C as w } from "./ContentMixin-DUtjlaOg.js";
+import { _ as g, q as m, g as v, b as y, E as d } from "./index-Dj4nDRx6.js";
+import { C as w } from "./ContentMixin-CNJBk8X5.js";
 import { ScaffoldVuer as b } from "@abi-software/scaffoldvuer";
-import { resolveComponent as p, openBlock as u, createElementBlock as S, createVNode as M, createBlock as $, createCommentVNode as C } from "vue";
-const N = {
+import { resolveComponent as p, openBlock as u, createElementBlock as S, createVNode as M, createBlock as N, createCommentVNode as $ } from "vue";
+const C = {
   name: "Scaffold",
   mixins: [w],
   components: {
@@ -36,7 +36,10 @@ const N = {
       let t = [];
       const n = !!e;
       if (e) {
-        const o = e.OR[1].AND[1].models;
+        const o = [];
+        e.OR.forEach((s) => {
+          "AND" in s && s.AND.length >= 2 && "models" in s.AND[1] && o.push(...s.AND[1].models);
+        });
         for (const s of o) {
           const i = this.nervesKnowledge.find((f) => f.id === s);
           if (i) {
@@ -79,8 +82,8 @@ const N = {
                 const l = this.connectivitiesStore.filterOptions[this.entry.resource].find((r) => r.key === `flatmap.connectivity.source.${s}`);
                 let a;
                 l == null || l.children.forEach((r) => {
-                  var d;
-                  r.label.toLowerCase() === n && (a = r), (d = r.children) == null || d.forEach((h) => {
+                  var c;
+                  r.label.toLowerCase() === n && (a = r), (c = r.children) == null || c.forEach((h) => {
                     h.label.toLowerCase() === n && (a = h);
                   });
                 }), a && (i = a.key.replace(`flatmap.connectivity.source.${s}.`, ""), this.filter.push({
@@ -91,7 +94,7 @@ const N = {
                 }));
               }
             }
-            c.emit("neuron-connection-feature-click", {
+            d.emit("neuron-connection-feature-click", {
               filters: this.filter,
               search: this.filter.length ? "" : n
             });
@@ -100,7 +103,7 @@ const N = {
             o.length && this.getKnowledgeTooltip({ data: o, type: this.entry });
           }
         }
-      } else t.length > 1 ? this.$refs.scaffold.viewingMode === "Exploration" && this.clickedObject && this.$refs.scaffold.$module.setIgnorePicking(!1) : (this.clickedObject = void 0, c.emit("connectivity-info-close"));
+      } else t.length > 1 ? this.$refs.scaffold.viewingMode === "Exploration" && this.clickedObject && this.$refs.scaffold.$module.setIgnorePicking(!1) : (this.clickedObject = void 0, d.emit("connectivity-info-close"));
     },
     onResize: function() {
       this.scaffoldCamera.onResize();
@@ -138,7 +141,7 @@ const N = {
       Array.isArray(e) ? n = e : n = [e.name], t && this.$refs.scaffold.changeActiveByName(n, "", !1), this.$refs.scaffold.viewRegion(n);
     },
     scaffoldIsReady: function() {
-      this.scaffoldLoaded = !0, this.$refs.scaffold.$module.graphicsHighlight.highlightColour = [1, 0, 1], this.visible && this.entry.rotation && this.entry.rotation, this.updateViewerSettings(), c.emit("mapLoaded", this.$refs.scaffold), setTimeout(() => {
+      this.scaffoldLoaded = !0, this.$refs.scaffold.$module.graphicsHighlight.highlightColour = [1, 0, 1], this.visible && this.entry.rotation && this.entry.rotation, this.updateViewerSettings(), d.emit("mapLoaded", this.$refs.scaffold), setTimeout(() => {
         this.setNerveGreyScale();
       }, 500);
     },
@@ -190,7 +193,7 @@ const N = {
   },
   computed: {
     warningMessage: function() {
-      return this.entry.isBodyScaffold ? "This map displays the anatomical location and connectivity of nerves, through which the neuron populations from the ApiNATOMY models available in SCKAN can be routed." : "Under active development";
+      return this.entry.discoverId === "307" || this.entry.discoverId === 307 ? "This map displays the anatomical location and connectivity of nerves, through which the neuron populations from the ApiNATOMY models available in SCKAN can be routed." : "Under active development";
     },
     markerLabels: function() {
       return this.settingsStore.globalSettings.displayMarkers ? this.settingsStore.numberOfDatasetsForFacets : {};
@@ -222,10 +225,10 @@ const N = {
   mounted: function() {
     this.scaffoldCamera = this.$refs.scaffold.$module.scene.getZincCameraControls();
   }
-}, O = { class: "viewer-container" };
-function L(e, t, n, o, s, i) {
+}, I = { class: "viewer-container" };
+function O(e, t, n, o, s, i) {
   const f = p("ScaffoldVuer"), l = p("HelpModeDialog");
-  return u(), S("div", O, [
+  return u(), S("div", I, [
     M(f, {
       state: e.entry.state,
       url: e.entry.resource,
@@ -262,20 +265,20 @@ function L(e, t, n, o, s, i) {
       showOpenMapButton: e.showOpenMapButton,
       usageConfig: {
         showTubeLinesControls: !1,
-        tubeLines: e.entry.discoverId === "307"
+        tubeLines: e.entry.discoverId === "307" || e.entry.discoverId === 307
       }
     }, null, 8, ["state", "url", "region", "onOnReady", "onOpenMap", "helpMode", "helpModeActiveItem", "helpModeDialog", "onAnnotationOpen", "onAnnotationClose", "onUpdateOfflineAnnotationEnabled", "annotationSidebar", "onHelpModeLastItem", "onShownTooltip", "onShownMapTooltip", "render", "warning-message", "view-u-r-l", "markerLabels", "flatmapAPI", "showLocalSettings", "showOpenMapButton", "usageConfig"]),
-    e.helpMode && e.useHelpModeDialog ? (u(), $(l, {
+    e.helpMode && e.useHelpModeDialog ? (u(), N(l, {
       key: 0,
       ref: "scaffoldHelp",
       scaffoldRef: e.scaffoldRef,
       lastItem: e.helpModeLastItem,
       onShowNext: e.onHelpModeShowNext,
       onFinishHelpMode: e.onFinishHelpMode
-    }, null, 8, ["scaffoldRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : C("", !0)
+    }, null, 8, ["scaffoldRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : $("", !0)
   ]);
 }
-const H = /* @__PURE__ */ g(N, [["render", L], ["__scopeId", "data-v-6dabbfee"]]);
+const H = /* @__PURE__ */ g(C, [["render", O], ["__scopeId", "data-v-5de11cee"]]);
 export {
   H as default
 };

package/dist/{Simulation-CJVUrAoC.js → Simulation-BrFO_3Hy.js}

@@ -1,7 +1,7 @@
-import { C as n } from "./ContentMixin-DUtjlaOg.js";
+import { C as n } from "./ContentMixin-CNJBk8X5.js";
 import { SimulationVuer as e } from "@abi-software/simulationvuer";
 import { resolveComponent as r, openBlock as a, createBlock as c } from "vue";
-import { _ as m } from "./index-Cl5VNhAK.js";
+import { _ as m } from "./index-Dj4nDRx6.js";
 const s = {
   name: "Simulation",
   mixins: [n],