@abi-software/mapintegratedvuer 1.10.2-beta.0 → 1.10.2

package/dist/{ContentMixin-CGhcj7xh.js → ContentMixin-s7Ep3pGV.js}

@@ -1,20 +1,20 @@
 import { markRaw as F } from "vue";
-import { u as C, c as I, d as A, E as f, a as M, g as S, e as $, f as H, l as N } from "./index-Dm85KBw6.js";
-import { mapStores as L } from "pinia";
-const d = function(e) {
-  return e ? [...new Set(e.map((t) => JSON.stringify(t)))].map(
-    (t) => JSON.parse(t)
+import { u as C, c as I, d as A, a as h, T as M, g as S, e as $, f as H, l as L } from "./index-DL73mn-k.js";
+import { mapStores as N } from "pinia";
+const d = function(t) {
+  return t ? [...new Set(t.map((e) => JSON.stringify(e)))].map(
+    (e) => JSON.parse(e)
   ) : [];
-}, m = [], v = async function(e, t) {
-  const i = t.filter(
+}, m = [], v = async function(t, e) {
+  const i = e.filter(
     (o) => m.some((a) => a.taxon === o)
   ), n = m.filter(
     (o) => i.includes(o.taxon)
-  ), s = t.filter(
+  ), s = e.filter(
     (o) => !i.includes(o)
   );
   if (s.length) {
-    const o = await e.queryLabels(s);
+    const o = await t.queryLabels(s);
     if (o.length)
       return o.forEach((a) => {
         let { entity: r, label: l } = a;
@@ -24,25 +24,25 @@ const d = function(e) {
       }), n;
   } else
     return n;
-}, g = function(e, t) {
-  if (!e || !t) return !1;
-  let i = JSON.stringify(e), n = JSON.stringify(t);
+}, g = function(t, e) {
+  if (!t || !e) return !1;
+  let i = JSON.stringify(t), n = JSON.stringify(e);
   return i.indexOf(n) !== -1;
-}, p = (e, t) => {
-  const i = e.name ?? e, n = t.name ?? t, s = i.toUpperCase(), o = n.toUpperCase();
+}, p = (t, e) => {
+  const i = t.name ?? t, n = e.name ?? e, s = i.toUpperCase(), o = n.toUpperCase();
   return s < o ? -1 : s > o ? 1 : 0;
 };
 let P = function() {
-  this.initialise = function(e) {
-    this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.rawURLs = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "sckan";
-  }, this.createTooltipData = async function(e, t) {
+  this.initialise = function(t) {
+    this.flatmapAPI = t, this.destinations = [], this.origins = [], this.components = [], this.rawURLs = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "sckan";
+  }, this.createTooltipData = async function(t, e) {
     let i = [];
-    t.feature.hyperlinks && t.feature.hyperlinks.length > 0 ? i = t.feature.hyperlinks : i = this.rawURLs;
+    e.feature.hyperlinks && e.feature.hyperlinks.length > 0 ? i = e.feature.hyperlinks : i = this.rawURLs;
     let n;
-    if (t.provenanceTaxonomy) {
+    if (e.provenanceTaxonomy) {
       n = [];
       try {
-        const o = await v(e, t.provenanceTaxonomy);
+        const o = await v(t, e.provenanceTaxonomy);
         o.length && o.forEach((a) => {
           const { label: r } = a;
           n.push(r);
@@ -58,16 +58,16 @@ let P = function() {
       destinationsWithDatasets: this.destinationsWithDatasets,
       originsWithDatasets: this.originsWithDatasets,
       componentsWithDatasets: this.componentsWithDatasets,
-      title: t.label,
-      featureId: t.resource,
+      title: e.label,
+      featureId: e.resource,
       hyperlinks: i,
-      provenanceTaxonomy: t.provenanceTaxonomy,
+      provenanceTaxonomy: e.provenanceTaxonomy,
       provenanceTaxonomyLabel: n,
       connectivitySource: this.connectivitySource
     };
-  }, this.updateTooltipData = function(e) {
+  }, this.updateTooltipData = function(t) {
     return {
-      ...e,
+      ...t,
       origins: this.origins,
       originsWithDatasets: this.originsWithDatasets,
       components: this.components,
@@ -76,16 +76,16 @@ let P = function() {
       destinationsWithDatasets: this.destinationsWithDatasets,
       connectivitySource: this.connectivitySource
     };
-  }, this.createComponentsLabelList = function(e, t) {
+  }, this.createComponentsLabelList = function(t, e) {
     let i = [];
-    return e.forEach((n) => {
-      i.push(this.createLabelFromNeuralNode(n[0]), t), n.length === 2 && i.push(this.createLabelFromNeuralNode(n[1]), t);
+    return t.forEach((n) => {
+      i.push(this.createLabelFromNeuralNode(n[0]), e), n.length === 2 && i.push(this.createLabelFromNeuralNode(n[1]), e);
     }), i;
-  }, this.createLabelLookup = function(e, t) {
+  }, this.createLabelLookup = function(t, e) {
     return new Promise(async (i) => {
       let n = {};
       this.uberons = [];
-      const s = await v(e, t);
+      const s = await v(t, e);
       s.length && (s.forEach((o) => {
         const { taxon: a, label: r } = o;
         n[a] = r, this.uberons.push({
@@ -94,59 +94,59 @@ let P = function() {
         });
       }), i(n));
     });
-  }, this.buildConnectivitySqlStatement = function(e) {
-    let t = "select knowledge from knowledge where entity in (";
-    if (e.length === 1)
-      t += `'${e[0]}')`;
-    else if (e.length > 1)
-      for (let i in e)
-        t += `'${e[i]}'${i >= e.length - 1 ? ")" : ","} `;
-    return t;
-  }, this.buildLabelSqlStatement = function(e) {
-    let t = "select entity, label from labels where entity in (";
-    if (e.length === 1)
-      t += `'${e[0]}')`;
-    else if (e.length > 1)
-      for (let i in e)
-        t += `'${e[i]}'${i >= e.length - 1 ? ")" : ","} `;
-    return t;
-  }, this.findAllIdsFromConnectivity = function(e) {
-    let t = e.connectivity.flat(), i = [...new Set(t)], n = [];
+  }, this.buildConnectivitySqlStatement = function(t) {
+    let e = "select knowledge from knowledge where entity in (";
+    if (t.length === 1)
+      e += `'${t[0]}')`;
+    else if (t.length > 1)
+      for (let i in t)
+        e += `'${t[i]}'${i >= t.length - 1 ? ")" : ","} `;
+    return e;
+  }, this.buildLabelSqlStatement = function(t) {
+    let e = "select entity, label from labels where entity in (";
+    if (t.length === 1)
+      e += `'${t[0]}')`;
+    else if (t.length > 1)
+      for (let i in t)
+        e += `'${t[i]}'${i >= t.length - 1 ? ")" : ","} `;
+    return e;
+  }, this.findAllIdsFromConnectivity = function(t) {
+    let e = t.connectivity.flat(), i = [...new Set(e)], n = [];
     return i.forEach((s) => {
       Array.isArray(s) ? n.push(s.flat()) : n.push(s);
     }), [...new Set(n.flat())];
-  }, this.flattenConnectivity = function(e) {
-    let t = e.flat(), i = [...new Set(t)], n = [];
+  }, this.flattenConnectivity = function(t) {
+    let e = t.flat(), i = [...new Set(e)], n = [];
     return i.forEach((s) => {
       Array.isArray(s) ? n.push(s.flat()) : n.push(s);
     }), n.flat();
-  }, this.findComponents = function(e, t, i, n) {
-    let s = e.connectivity.flat(), o = d(s), a = [], r = !1;
+  }, this.findComponents = function(t, e, i, n) {
+    let s = t.connectivity.flat(), o = d(s), a = [], r = !1;
     return o.forEach((l) => {
-      r = !1, g(t, l) && (r = !0), n && g(n, l) && (r = !0), g(i, l) && (r = !0), r || a.push(l);
+      r = !1, g(e, l) && (r = !0), n && g(n, l) && (r = !0), g(i, l) && (r = !0), r || a.push(l);
     }), a;
-  }, this.retrieveFlatmapKnowledgeForEvent = async function(e, t) {
+  }, this.retrieveFlatmapKnowledgeForEvent = async function(t, e) {
     this.controller && this.controller.abort(), this.controller = new AbortController(), this.controller.signal;
-    const i = t.resource;
+    const i = e.resource;
     if (this.destinations = [], this.origins = [], this.components = [], this.rawURLs = [], !i || i.length === 0 || !i[0]) return;
-    let n = this.queryForConnectivityNew(e, i[0]);
+    let n = this.queryForConnectivityNew(t, i[0]);
     return await Promise.all([n]);
-  }, this.queryForConnectivityNew = function(e, t, i = "sckan", n = !0) {
+  }, this.queryForConnectivityNew = function(t, e, i = "sckan", n = !0) {
     return this.connectivitySource = i, new Promise((s) => {
-      (i === "map" ? this.queryMapConnectivity(e.provenance.uuid, t) : e.queryKnowledge(t)).then((a) => {
+      (i === "map" ? this.queryMapConnectivity(t.provenance.uuid, e) : t.queryKnowledge(e)).then((a) => {
         if (this.checkConnectivityExists(a)) {
           let r = a;
-          n ? this.processConnectivity(e, r).then((l) => {
+          n ? this.processConnectivity(t, r).then((l) => {
             a.references && (this.rawURLs = [...a.references]), s(l);
           }) : s(r);
         } else
           s(!1);
       }).catch((a) => {
-        a.name === "AbortError" || console.warn(`Unable to get the knowledge for the entity ${t}.`), s(!1);
+        a.name === "AbortError" || console.warn(`Unable to get the knowledge for the entity ${e}.`), s(!1);
       });
     });
-  }, this.queryMapConnectivity = async function(e, t) {
-    const i = this.flatmapAPI + `flatmap/${e}/connectivity/${t}`;
+  }, this.queryMapConnectivity = async function(t, e) {
+    const i = this.flatmapAPI + `flatmap/${t}/connectivity/${e}`;
     try {
       const n = await fetch(i);
       if (!n.ok)
@@ -155,8 +155,8 @@ let P = function() {
     } catch (n) {
       throw new Error(n);
     }
-  }, this.queryForConnectivity = function(e, t, i, n = !0) {
-    const s = { sql: this.buildConnectivitySqlStatement(t) }, o = {
+  }, this.queryForConnectivity = function(t, e, i, n = !0) {
+    const s = { sql: this.buildConnectivitySqlStatement(e) }, o = {
       method: "POST",
       headers: {
         "Content-Type": "application/json"
@@ -169,7 +169,7 @@ let P = function() {
       fetch(`${this.flatmapAPI}knowledge/query/`, o).then((r) => r.json()).then((r) => {
         if (this.connectivityExists(r)) {
           let l = JSON.parse(r.values[0][0]);
-          n ? this.processConnectivity(e, l).then((c) => {
+          n ? this.processConnectivity(t, l).then((c) => {
             a(c);
           }) : a(l);
         } else
@@ -178,23 +178,23 @@ let P = function() {
         r.name === "AbortError" || console.error("Error:", r), a(!1);
       });
     });
-  }, this.checkConnectivityExists = function(e) {
-    var t;
-    return e && ((t = e.connectivity) == null ? void 0 : t.length);
-  }, this.connectivityExists = function(e) {
-    return !!(e.values && e.values.length > 0 && JSON.parse(e.values[0][0]).connectivity && JSON.parse(e.values[0][0]).connectivity.length > 0);
-  }, this.findIfNodeIsSingle = function(e) {
-    return e.length === 1 ? (console.error("Server returns a single node", e), e[0]) : e.length === 2 && e[1].length === 0 ? e[0] : !1;
-  }, this.createLabelFromNeuralNode = function(e, t) {
-    let i = this.findIfNodeIsSingle(e);
+  }, this.checkConnectivityExists = function(t) {
+    var e;
+    return t && ((e = t.connectivity) == null ? void 0 : e.length);
+  }, this.connectivityExists = function(t) {
+    return !!(t.values && t.values.length > 0 && JSON.parse(t.values[0][0]).connectivity && JSON.parse(t.values[0][0]).connectivity.length > 0);
+  }, this.findIfNodeIsSingle = function(t) {
+    return t.length === 1 ? (console.error("Server returns a single node", t), t[0]) : t.length === 2 && t[1].length === 0 ? t[0] : !1;
+  }, this.createLabelFromNeuralNode = function(t, e) {
+    let i = this.findIfNodeIsSingle(t);
     if (i)
-      return t[i];
-    let n = t[e[0]];
-    return e.length === 2 && e[1].length > 0 && e[1].forEach((s) => {
-      t[s] == null ? n += `, ${s}` : n += `, ${t[s]}`;
+      return e[i];
+    let n = e[t[0]];
+    return t.length === 2 && t[1].length > 0 && t[1].forEach((s) => {
+      e[s] == null ? n += `, ${s}` : n += `, ${e[s]}`;
     }), n;
-  }, this.flattenAndFindDatasets = function(e, t, i) {
-    let n = this.flattenConnectivity(e), s = this.flattenConnectivity(t), o = this.flattenConnectivity(i);
+  }, this.flattenAndFindDatasets = function(t, e, i) {
+    let n = this.flattenConnectivity(t), s = this.flattenConnectivity(e), o = this.flattenConnectivity(i);
     this.originsWithDatasets = this.uberons.filter(
       (a) => n.indexOf(a.id) !== -1
     ).sort(p), this.componentsWithDatasets = this.uberons.filter(
@@ -202,20 +202,20 @@ let P = function() {
     ).sort(p), this.destinationsWithDatasets = this.uberons.filter(
       (a) => o.indexOf(a.id) !== -1
     ).sort(p);
-  }, this.processConnectivity = function(e, t) {
+  }, this.processConnectivity = function(t, e) {
     return new Promise((i) => {
       let n = [], s = [], o;
-      if (t && t["node-phenotypes"]) {
+      if (e && e["node-phenotypes"]) {
         const l = ["ilxtr:hasSomaLocatedIn"], c = ["ilxtr:hasAxonPresynapticElementIn", "ilxtr:hasAxonSensorySubcellularElementIn"];
-        l.forEach((h) => {
-          h in t["node-phenotypes"] && n.push(...t["node-phenotypes"][h]);
-        }), n = d(n), c.forEach((h) => {
-          h in t["node-phenotypes"] && s.push(...t["node-phenotypes"][h]);
+        l.forEach((f) => {
+          f in e["node-phenotypes"] && n.push(...e["node-phenotypes"][f]);
+        }), n = d(n), c.forEach((f) => {
+          f in e["node-phenotypes"] && s.push(...e["node-phenotypes"][f]);
         }), s = d(s);
       } else
-        s = d(t.axons), t.somas && t.somas.length > 0 && n.push(...t.somas), t.dendrites && t.dendrites.length > 0 && n.push(...t.dendrites), n = d(n), o = t.somas;
-      const a = this.findComponents(t, s, n, o), r = this.findAllIdsFromConnectivity(t);
-      this.createLabelLookup(e, r).then((l) => {
+        s = d(e.axons), e.somas && e.somas.length > 0 && n.push(...e.somas), e.dendrites && e.dendrites.length > 0 && n.push(...e.dendrites), n = d(n), o = e.somas;
+      const a = this.findComponents(e, s, n, o), r = this.findAllIdsFromConnectivity(e);
+      this.createLabelLookup(t, r).then((l) => {
         this.origins = n.map(
           (c) => this.createLabelFromNeuralNode(c, l)
         ).sort(p), this.components = a.map(
@@ -236,31 +236,31 @@ let P = function() {
         });
       });
     });
-  }, this.buildPubmedSqlStatement = function(e) {
-    let t = "select distinct publication from publications where entity in (";
-    if (e.length === 1)
-      t += `'${e[0]}')`;
-    else if (e.length > 1)
-      for (let i in e)
-        t += `'${e[i]}'${i >= e.length - 1 ? ")" : ","} `;
-    return t;
-  }, this.buildPubmedSqlStatementForModels = function(e) {
-    return `select distinct publication from publications where entity = '${e}'`;
-  }, this.flatmapQuery = function(e) {
-    const t = { sql: e };
+  }, this.buildPubmedSqlStatement = function(t) {
+    let e = "select distinct publication from publications where entity in (";
+    if (t.length === 1)
+      e += `'${t[0]}')`;
+    else if (t.length > 1)
+      for (let i in t)
+        e += `'${t[i]}'${i >= t.length - 1 ? ")" : ","} `;
+    return e;
+  }, this.buildPubmedSqlStatementForModels = function(t) {
+    return `select distinct publication from publications where entity = '${t}'`;
+  }, this.flatmapQuery = function(t) {
+    const e = { sql: t };
     return fetch(`${this.flatmapAPI}knowledge/query/`, {
       method: "POST",
       headers: {
         "Content-Type": "application/json"
       },
-      body: JSON.stringify(t)
+      body: JSON.stringify(e)
     }).then((i) => i.json()).catch((i) => {
       console.error("Error:", i);
     });
   };
 };
-function T(e) {
-  return e[0].toUpperCase() + e.substring(1);
+function T(t) {
+  return t[0].toUpperCase() + t.substring(1);
 }
 const O = {
   emits: ["flatmap-provenance-ready", "resource-selected", "species-changed"],
@@ -281,7 +281,7 @@ const O = {
   },
   inject: ["showGlobalSettings", "showOpenMapButton"],
   computed: {
-    ...L(C, I, A),
+    ...N(C, I, A),
     idNamePair() {
       return this.splitFlowStore.idNamePair;
     },
@@ -309,25 +309,25 @@ const O = {
     onConnectivityItemClose() {
       if (this != null && this.alive) {
         if (this.multiflatmapRef) {
-          const e = this.multiflatmapRef.getCurrentFlatmap();
-          e && e.closeTooltip();
+          const t = this.multiflatmapRef.getCurrentFlatmap();
+          t && t.closeTooltip();
         }
         this.flatmapRef && this.flatmapRef.closeTooltip();
       }
     },
     getState: function() {
     },
-    openMap: function(e) {
-      f.emit("OpenNewMap", e), this.trackOpenMap(`open_new_${e}_map`);
+    openMap: function(t) {
+      h.emit("OpenNewMap", t), this.trackOpenMap(`open_new_${t}_map`);
     },
-    onMapmanagerLoaded: function(e) {
-      this.settingsStore.updateMapManager(e);
+    onMapmanagerLoaded: function(t) {
+      this.settingsStore.updateMapManager(t);
     },
-    trackOpenMap: function(e) {
+    trackOpenMap: function(t) {
       M.sendEvent({
         event: "interaction_event",
         event_name: "portal_maps_open_map",
-        category: e,
+        category: t,
         location: "open_new_map"
       });
     },
@@ -347,25 +347,25 @@ const O = {
     /**
      * Callback when the vuers emit a selected event.
      */
-    resourceSelected: function(e, t) {
+    resourceSelected: function(t, e) {
       var a, r, l, c;
-      const i = t[0];
+      const i = e[0];
       if (this.resourceHasAction(i)) {
-        f.emit("PopoverActionClick", i);
+        h.emit("PopoverActionClick", i);
         return;
       }
       let n, s = !1;
       const o = {
         paneIndex: this.entry.id,
-        type: e,
-        resource: t,
+        type: t,
+        resource: e,
         internalName: void 0,
         eventType: void 0
       };
-      if (e == "MultiFlatmap" || e == "Flatmap")
+      if (t == "MultiFlatmap" || t == "Flatmap")
         if (o.internalName = (a = i == null ? void 0 : i.feature) != null && a.label ? i.feature.label : this.idNamePair[i.feature.models], i.eventType == "click") {
           if (o.eventType = "selected", i.feature.type == "marker") {
-            let h = o.internalName;
+            let f = o.internalName;
             if (this.settingsStore.isFeaturedMarkerIdentifier(i.feature.id))
               n = {
                 type: "Search",
@@ -375,7 +375,7 @@ const O = {
             else {
               n = {
                 type: "Facet",
-                facet: h,
+                facet: f,
                 facetPropPath: "anatomy.organ.category.name",
                 facetSubPropPath: "anatomy.organ.name",
                 term: "Anatomical structure"
@@ -383,24 +383,24 @@ const O = {
               let u = /* @__PURE__ */ new Set();
               i.feature["marker-terms"].forEach((y) => {
                 u.add(y.label);
-              }), u.add(h), u.size > 0 && (n = {
+              }), u.add(f), u.size > 0 && (n = {
                 type: "Facets",
                 labels: [...u]
               });
             }
-            s = !0, e == "MultiFlatmap" && this.$refs.multiflatmap.getCurrentFlatmap().mapImp.clearSearchResults();
+            s = !0, t == "MultiFlatmap" && this.$refs.multiflatmap.getCurrentFlatmap().mapImp.clearSearchResults();
           }
         } else i.eventType == "mouseenter" && (o.eventType = "highlighted", s = !0);
-      else e == "Scaffold" && (i && ((((r = i.data) == null ? void 0 : r.id) === void 0 || ((l = i.data) == null ? void 0 : l.id) === "") && (i.data.id = (c = i.data) == null ? void 0 : c.group), o.internalName = i.data.id, i.data.lastActionOnMarker === !0 && (n = {
+      else t == "Scaffold" && (i && ((((r = i.data) == null ? void 0 : r.id) === void 0 || ((l = i.data) == null ? void 0 : l.id) === "") && (i.data.id = (c = i.data) == null ? void 0 : c.group), o.internalName = i.data.id, i.data.lastActionOnMarker === !0 && (n = {
         type: "Facet",
         facet: T(i.data.id),
         facetPropPath: "anatomy.organ.category.name",
         term: "Anatomical structure"
       })), o.eventType = "selected", s = !0);
-      n && f.emit("PopoverActionClick", n), s && this.$emit("resource-selected", o);
+      n && h.emit("PopoverActionClick", n), s && this.$emit("resource-selected", o);
     },
-    resourceHasAction: function(e) {
-      return e && (e.type === "URL" || e.type === "Search" || e.type === "Neuron Search" || e.type == "Facet" || e.type == "Facets");
+    resourceHasAction: function(t) {
+      return t && (t.type === "URL" || t.type === "Search" || t.type === "Neuron Search" || t.type == "Facet" || t.type == "Facets");
     },
     /**
      * Check if this viewer is currently visible
@@ -415,39 +415,39 @@ const O = {
      * if it cannot be found in the map, it will perform several
      * calls to try to ge a valid name/id.
      */
-    getNameAndIdFromSyncData: async function(e) {
-      let t = e.internalName;
-      t === void 0 && e.resource && (t = e.resource.label);
+    getNameAndIdFromSyncData: async function(t) {
+      let e = t.internalName;
+      e === void 0 && t.resource && (e = t.resource.label);
       let i;
-      if (e.resource && e.resource.resource && (i = e.resource.resource[0]), this.entry.type === "Scaffold") {
-        if (this.$refs.scaffold.findObjectsWithGroupName(t).length === 0) {
-          if (e.resource && e.resource.feature) {
-            const o = S(e.resource.feature.models);
+      if (t.resource && t.resource.resource && (i = t.resource.resource[0]), this.entry.type === "Scaffold") {
+        if (this.$refs.scaffold.findObjectsWithGroupName(e).length === 0) {
+          if (t.resource && t.resource.feature) {
+            const o = S(t.resource.feature.models);
             if (o.length > 0) return o;
           }
-          let s = $(t);
+          let s = $(e);
           if (s)
             return s;
-          if (i && e.eventType === "selected")
+          if (i && t.eventType === "selected")
             return fetch(`${this.apiLocation}get-related-terms/${i}`).then((o) => o.json()).then((o) => {
               var a;
               if (((a = o.uberon) == null ? void 0 : a.array.length) > 0)
-                return t = o.uberon.array[0].name.charAt(0).toUpperCase() + o.uberon.array[0].name.slice(1), i = o.uberon.array[0].id.toUpperCase(), { id: i, name: t };
+                return e = o.uberon.array[0].name.charAt(0).toUpperCase() + o.uberon.array[0].name.slice(1), i = o.uberon.array[0].id.toUpperCase(), { id: i, name: e };
             });
         }
       } else if (this.entry.type === "MultiFlatmap")
-        if (t === "Bladder")
-          t = "Urinary Bladder";
+        if (e === "Bladder")
+          e = "Urinary Bladder";
         else {
-          const n = S(t);
-          n.length > 0 && (t = n[0]);
+          const n = S(e);
+          n.length > 0 && (e = n[0]);
         }
-      return { id: i, name: t };
+      return { id: i, name: e };
     },
     // Get the species and andaotmy info for the featured datasets
-    getDatasetAnatomyInfo: function(e) {
-      fetch(`${this.apiLocation}dataset_info/anatomy?identifier=${e}`).then((t) => t.json()).then((t) => {
-        const i = t.result[0];
+    getDatasetAnatomyInfo: function(t) {
+      fetch(`${this.apiLocation}dataset_info/anatomy?identifier=${t}`).then((e) => e.json()).then((e) => {
+        const i = e.result[0];
         let n;
         try {
           n = i.anatomy.organ[0].curie;
@@ -471,7 +471,7 @@ const O = {
           o = void 0;
         }
         this.settingsStore.updateFeaturedMarker({
-          identifier: e,
+          identifier: t,
           marker: n,
           doi: s,
           species: o
@@ -480,25 +480,25 @@ const O = {
     },
     // Check if the old featured dataset api has any info
     oldFeaturedDatasetApiHasInfo: async function() {
-      let t = await (await fetch(`${this.apiLocation}get_featured_datasets_identifiers`)).json();
-      return !t.identifiers || t.identifiers.length == 0 ? !1 : t.identifiers;
+      let e = await (await fetch(`${this.apiLocation}get_featured_datasets_identifiers`)).json();
+      return !e.identifiers || e.identifiers.length == 0 ? !1 : e.identifiers;
     },
     // Check if the new featured dataset api has any info
     newFeaturedDatasetApiHasInfo: async function() {
-      let t = await (await fetch(`${this.apiLocation}get_featured_dataset`)).json();
-      return !t.datasets || t.datasets.length == 0 ? !1 : t.datasets.map((i) => i.id);
+      let e = await (await fetch(`${this.apiLocation}get_featured_dataset`)).json();
+      return !e.datasets || e.datasets.length == 0 ? !1 : e.datasets.map((i) => i.id);
     },
     /**
      * Get a list of featured datasets to display.
      */
     getFeaturedDatasets: async function() {
-      let e = [], t = await this.oldFeaturedDatasetApiHasInfo();
-      if (t) e = t;
+      let t = [], e = await this.oldFeaturedDatasetApiHasInfo();
+      if (e) t = e;
       else {
         let i = await this.newFeaturedDatasetApiHasInfo();
-        i && (e = i);
+        i && (t = i);
       }
-      this.settingsStore.updateFeatured(e), e.forEach((i) => {
+      this.settingsStore.updateFeatured(t), t.forEach((i) => {
         this.getDatasetAnatomyInfo(i);
       });
     },
@@ -523,8 +523,8 @@ const O = {
     onHelpModeShowNext: function() {
       this.helpModeActiveItem += 1;
     },
-    onHelpModeLastItem: function(e) {
-      e && (this.helpModeLastItem = !0);
+    onHelpModeLastItem: function(t) {
+      t && (this.helpModeLastItem = !0);
     },
     onFinishHelpMode: function() {
       this.helpMode = !1, this.helpModeActiveItem = 0, this.helpModeLastItem = !1;
@@ -538,36 +538,36 @@ const O = {
     /**
      * End help-mode only if user clicks outside of help mode dialog.
      */
-    checkEndHelpMouseDown: function(e) {
-      e.target.closest(".help-mode-dialog") || this.endHelp();
+    checkEndHelpMouseDown: function(t) {
+      t.target.closest(".help-mode-dialog") || this.endHelp();
     },
-    flatmapHighlight: async function(e, t, i, n) {
-      let s = [...t, ...n];
+    flatmapHighlight: async function(t, e, i, n) {
+      let s = [...e, ...n];
       const o = this.settingsStore.globalSettings;
       if (o.highlightConnectedPaths) {
-        const a = t.length ? t : n.length ? n : [], r = await e.retrieveConnectedPaths(a);
+        const a = e.length ? e : n.length ? n : [], r = await t.retrieveConnectedPaths(a);
         r && s.push(...r);
       }
       if (o.highlightDOIPaths) {
-        const a = await e.searchConnectivitiesByReference(i);
+        const a = await t.searchConnectivitiesByReference(i);
         a && s.push(...a);
       }
       return s = [...new Set(s)], s;
     },
-    sidebarHoverHighlight: function(e) {
-      var t, i;
+    sidebarHoverHighlight: function(t) {
+      var e, i;
       if (this.visible && ((this.flatmapRef || this.multiflatmapRef) && this.flatmapReady || this.scaffoldRef && this.scaffoldLoaded)) {
         const n = this.settingsStore.hoverAnatomies, s = this.settingsStore.hoverOrgans, o = this.settingsStore.hoverDOI, a = this.settingsStore.hoverConnectivity;
         let r = null, l = null;
-        this.flatmapRef && (r = this.flatmapRef), this.multiflatmapRef && (r = this.multiflatmapRef.getCurrentFlatmap()), this.scaffoldRef && (l = this.scaffoldRef), clearTimeout(this.highlightDelay), !n.length && !s.length && !o && !a.length && ((this.multiflatmapRef || this.flatmapRef) && r ? ((t = r.mapImp) == null || t.clearSearchResults(), e.connectivityProcessed && ((i = r.mapImp) == null || i.setPaint({ dimmed: !0 }))) : this.scaffoldRef && l && l.changeHighlightedByName(s, "", !1)), this.highlightDelay = setTimeout(() => {
+        this.flatmapRef && (r = this.flatmapRef), this.multiflatmapRef && (r = this.multiflatmapRef.getCurrentFlatmap()), this.scaffoldRef && (l = this.scaffoldRef), clearTimeout(this.highlightDelay), !n.length && !s.length && !o && !a.length && ((this.multiflatmapRef || this.flatmapRef) && r ? ((e = r.mapImp) == null || e.clearSearchResults(), t.connectivityProcessed && ((i = r.mapImp) == null || i.setPaint({ dimmed: !0 }))) : this.scaffoldRef && l && l.changeHighlightedByName(s, "", !1)), this.highlightDelay = setTimeout(() => {
           (n.length || s.length || o || a.length) && ((this.multiflatmapRef || this.flatmapRef) && r ? this.flatmapHighlight(r, n, o, a).then((c) => {
             try {
               r.showConnectivityTooltips({
                 connectivityInfo: { featureId: c },
                 data: []
               });
-            } catch (h) {
-              if (console.log(h), a.length && r.mapImp) {
+            } catch (f) {
+              if (console.log(f), a.length && r.mapImp) {
                 const u = r.mapImp.uuid;
                 c.every(
                   (w) => this.connectivityKnowledge[u].some(
@@ -580,33 +580,27 @@ const O = {
         }, 100);
       }
     },
-    onAnnotationOpen: function(e) {
-      f.emit("annotation-open", e);
+    onAnnotationOpen: function(t) {
+      h.emit("annotation-open", t);
     },
     onAnnotationClose: function() {
-      f.emit("sidebar-annotation-close");
+      h.emit("sidebar-annotation-close");
     },
-    updateOfflineAnnotationEnabled: function(e) {
-      f.emit("update-offline-annotation-enabled", e);
+    updateOfflineAnnotationEnabled: function(t) {
+      h.emit("update-offline-annotation-enabled", t);
     },
-    onConnectivityInfoOpen: function(e) {
-      f.emit("connectivity-info-open", e);
+    onConnectivityInfoOpen: function(t) {
+      h.emit("connectivity-info-open", t);
     },
-    onConnectivityError: function(e) {
-      f.emit("connectivity-error", e);
+    onConnectivityError: function(t) {
+      h.emit("connectivity-error", t);
     },
     onConnectivityInfoClose: function() {
-      f.emit("connectivity-info-close");
+      h.emit("connectivity-info-close");
     },
     onSidebarAnnotationClose: function() {
     },
-    onNeuronConnectionClick: function(e) {
-      f.emit("neuron-connection-click", e);
-    },
-    onNeuronConnectionFeatureClick: function(e) {
-      f.emit("neuron-connection-feature-click", e);
-    },
-    showConnectivity: function(e) {
+    showConnectivity: function() {
     },
     showConnectivitiesByReference: function() {
     },
@@ -616,10 +610,10 @@ const O = {
     },
     setVisibilityFilter: function() {
     },
-    loadConnectivityExplorerConfig: async function(e) {
-      const t = e.mapImp, i = H(t), n = F(new P());
+    loadConnectivityExplorerConfig: async function(t) {
+      const e = t.mapImp, i = H(e), n = F(new P());
       n.initialise(this.flatmapAPI);
-      const s = await N(t, n), o = t.uuid, a = t.pathways;
+      const s = await L(e, n), o = e.uuid, a = e.pathways;
       if (this.connectivityKnowledge[i] || (this.connectivityKnowledge[i] = s.filter((r) => {
         var l;
         return r.source === i && ((l = r.connectivity) == null ? void 0 : l.length);
@@ -627,7 +621,7 @@ const O = {
         const r = a ? a.paths : {};
         this.connectivityKnowledge[o] = this.connectivityKnowledge[i].filter((l) => l.id in r);
       }
-      this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), this.connectivityFilterOptions[o] || (this.connectivityFilterOptions[o] = await e.getFilterOptions()), this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivityFilterSources[o] || (this.connectivityFilterSources[o] = e.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources), f.emit("species-layout-connectivity-update");
+      this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), this.connectivityFilterOptions[o] || (this.connectivityFilterOptions[o] = await t.getFilterOptions()), this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivityFilterSources[o] || (this.connectivityFilterSources[o] = t.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources), h.emit("species-layout-connectivity-update");
     }
   },
   data: function() {
@@ -660,8 +654,8 @@ const O = {
     this.flatmapAPI = void 0, this.apiLocation = void 0, this.settingsStore.flatmapAPI && (this.flatmapAPI = this.settingsStore.flatmapAPI), this.settingsStore.sparcApi && (this.apiLocation = this.settingsStore.sparcApi), this.settingsStore.mapManager && (this.mapManager = this.settingsStore.mapManager);
   },
   watch: {
-    helpMode: function(e) {
-      e || (this.helpModeActiveItem = 0);
+    helpMode: function(t) {
+      t || (this.helpModeActiveItem = 0);
     }
   }
 };