@abi-software/mapintegratedvuer 1.10.1 → 1.10.2-beta.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{ContentMixin-BjWQ5hyW.js → ContentMixin-CGhcj7xh.js} +46 -62
- package/dist/{Flatmap-CRBl8Mce.js → Flatmap-DbgtlxmY.js} +72 -63
- package/dist/{Iframe-Oiu2HnRZ.js → Iframe-BEt0VIIr.js} +2 -2
- package/dist/{MultiFlatmap-vWte5WUA.js → MultiFlatmap-BPc3Wof9.js} +62 -112
- package/dist/{Plot-CEBNX8B0.js → Plot-CNEgDLi2.js} +2 -2
- package/dist/{Scaffold-Ckfm9HCl.js → Scaffold-Cn8XyaSz.js} +28 -53
- package/dist/{Simulation-DCqdDHl8.js → Simulation-wF9y8sIT.js} +2 -2
- package/dist/{index-Dg5B_ClS.js → index-Dm85KBw6.js} +21381 -21524
- package/dist/mapintegratedvuer.js +1 -1
- package/dist/mapintegratedvuer.umd.cjs +149 -149
- package/dist/{style-B7PIw3HT.js → style-DF6s1KEf.js} +1 -1
- package/dist/style.css +1 -1
- package/package.json +5 -5
- package/src/components/ContentVuer.vue +3 -15
- package/src/components/DialogToolbarContent.vue +57 -89
- package/src/components/SplitDialog.vue +37 -39
- package/src/components/SplitFlow.vue +72 -51
- package/src/components/viewers/Flatmap.vue +12 -0
- package/src/components/viewers/MultiFlatmap.vue +12 -84
- package/src/components/viewers/Scaffold.vue +0 -31
- package/src/components.d.ts +1 -1
- package/src/mixins/ContentMixin.js +15 -56
- package/src/stores/settings.js +1 -0
- package/src/stores/splitFlow.js +0 -69
- package/vite.config.js +3 -0
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@@ -1,6 +1,6 @@
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import { markRaw as F } from "vue";
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import { u as C, c as
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import { mapStores as
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import { u as C, c as I, d as A, E as f, a as M, g as S, e as $, f as H, l as N } from "./index-Dm85KBw6.js";
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import { mapStores as L } from "pinia";
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const d = function(e) {
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return e ? [...new Set(e.map((t) => JSON.stringify(t)))].map(
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(t) => JSON.parse(t)
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@@ -32,7 +32,7 @@ const d = function(e) {
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const i = e.name ?? e, n = t.name ?? t, s = i.toUpperCase(), o = n.toUpperCase();
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return s < o ? -1 : s > o ? 1 : 0;
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};
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let
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let P = function() {
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this.initialise = function(e) {
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this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.rawURLs = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "sckan";
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}, this.createTooltipData = async function(e, t) {
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@@ -207,10 +207,10 @@ let L = function() {
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let n = [], s = [], o;
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if (t && t["node-phenotypes"]) {
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const l = ["ilxtr:hasSomaLocatedIn"], c = ["ilxtr:hasAxonPresynapticElementIn", "ilxtr:hasAxonSensorySubcellularElementIn"];
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l.forEach((
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}), n = d(n), c.forEach((
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l.forEach((h) => {
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h in t["node-phenotypes"] && n.push(...t["node-phenotypes"][h]);
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}), n = d(n), c.forEach((h) => {
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h in t["node-phenotypes"] && s.push(...t["node-phenotypes"][h]);
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}), s = d(s);
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} else
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s = d(t.axons), t.somas && t.somas.length > 0 && n.push(...t.somas), t.dendrites && t.dendrites.length > 0 && n.push(...t.dendrites), n = d(n), o = t.somas;
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@@ -259,10 +259,10 @@ let L = function() {
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});
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};
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};
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function
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function T(e) {
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return e[0].toUpperCase() + e.substring(1);
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}
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const
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const O = {
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emits: ["flatmap-provenance-ready", "resource-selected", "species-changed"],
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props: {
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/**
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@@ -281,13 +281,10 @@ const x = {
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},
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inject: ["showGlobalSettings", "showOpenMapButton"],
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computed: {
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...
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...L(C, I, A),
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idNamePair() {
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return this.splitFlowStore.idNamePair;
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},
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syncMode() {
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return this.splitFlowStore.syncMode;
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},
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useHelpModeDialog() {
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return this.settingsStore.useHelpModeDialog;
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},
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@@ -318,18 +315,16 @@ const x = {
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this.flatmapRef && this.flatmapRef.closeTooltip();
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}
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},
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toggleSyncMode: function() {
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},
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getState: function() {
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},
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openMap: function(e) {
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f.emit("OpenNewMap", e), this.trackOpenMap(`open_new_${e}_map`);
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},
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onMapmanagerLoaded: function(e) {
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this.settingsStore.updateMapManager(e);
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},
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trackOpenMap: function(e) {
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M.sendEvent({
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event: "interaction_event",
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event_name: "portal_maps_open_map",
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category: e,
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@@ -356,7 +351,7 @@ const x = {
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var a, r, l, c;
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const i = t[0];
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if (this.resourceHasAction(i)) {
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f.emit("PopoverActionClick", i);
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return;
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}
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let n, s = !1;
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eventType: void 0
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};
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if (e == "MultiFlatmap" || e == "Flatmap")
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if (o.internalName = (a = i == null ? void 0 : i.feature) != null && a.label ? i.feature.label : this.idNamePair[i.feature.models], i.eventType == "click")
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if (o.internalName = (a = i == null ? void 0 : i.feature) != null && a.label ? i.feature.label : this.idNamePair[i.feature.models], i.eventType == "click") {
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if (o.eventType = "selected", i.feature.type == "marker") {
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let
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let h = o.internalName;
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if (this.settingsStore.isFeaturedMarkerIdentifier(i.feature.id))
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n = {
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type: "Search",
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else {
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n = {
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type: "Facet",
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facet:
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facet: h,
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facetPropPath: "anatomy.organ.category.name",
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facetSubPropPath: "anatomy.organ.name",
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term: "Anatomical structure"
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let u = /* @__PURE__ */ new Set();
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i.feature["marker-terms"].forEach((y) => {
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u.add(y.label);
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}), u.add(
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}), u.add(h), u.size > 0 && (n = {
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type: "Facets",
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labels: [...u]
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});
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}
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s = !0, e == "MultiFlatmap" && this.$refs.multiflatmap.getCurrentFlatmap().mapImp.clearSearchResults();
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}
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else i.eventType == "mouseenter" && (o.eventType = "highlighted", s = !0);
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}
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} else i.eventType == "mouseenter" && (o.eventType = "highlighted", s = !0);
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else e == "Scaffold" && (i && ((((r = i.data) == null ? void 0 : r.id) === void 0 || ((l = i.data) == null ? void 0 : l.id) === "") && (i.data.id = (c = i.data) == null ? void 0 : c.group), o.internalName = i.data.id, i.data.lastActionOnMarker === !0 && (n = {
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type: "Facet",
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facet:
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facet: T(i.data.id),
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facetPropPath: "anatomy.organ.category.name",
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term: "Anatomical structure"
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})), o.eventType = "selected", s = !0);
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n &&
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n && f.emit("PopoverActionClick", n), s && this.$emit("resource-selected", o);
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},
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resourceHasAction: function(e) {
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return e && (e.type === "URL" || e.type === "Search" || e.type === "Neuron Search" || e.type == "Facet" || e.type == "Facets");
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const o = S(e.resource.feature.models);
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if (o.length > 0) return o;
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}
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let s =
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let s = $(t);
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if (s)
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return s;
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if (i && e.eventType === "selected")
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},
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zoomToFeatures: function() {
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},
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handleSyncMouseEvent: async function(e) {
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let t = await this.getNameAndIdFromSyncData(e);
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e.eventType === "highlighted" ? this.highlightFeatures(t) : e.eventType === "selected" && this.displayTooltip(t);
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},
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* Handle sync pan zoom event
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handleSyncPanZoomEvent: function() {
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highlightFeatures: function() {
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receiveSynchronisedEvent: async function(e) {
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onResize: function() {
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if (this.visible && ((this.flatmapRef || this.multiflatmapRef) && this.flatmapReady || this.scaffoldRef && this.scaffoldLoaded)) {
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const n = this.settingsStore.hoverAnatomies, s = this.settingsStore.hoverOrgans, o = this.settingsStore.hoverDOI, a = this.settingsStore.hoverConnectivity;
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let r = null, l = null;
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this.flatmapRef && (r = this.flatmapRef), this.multiflatmapRef && (r = this.multiflatmapRef.getCurrentFlatmap()), this.scaffoldRef && (l = this.scaffoldRef), clearTimeout(this.highlightDelay), !n.length && !s.length && !o && !a.length && ((this.multiflatmapRef || this.flatmapRef) && r ? ((t = r.mapImp) == null || t.clearSearchResults(), e.
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this.flatmapRef && (r = this.flatmapRef), this.multiflatmapRef && (r = this.multiflatmapRef.getCurrentFlatmap()), this.scaffoldRef && (l = this.scaffoldRef), clearTimeout(this.highlightDelay), !n.length && !s.length && !o && !a.length && ((this.multiflatmapRef || this.flatmapRef) && r ? ((t = r.mapImp) == null || t.clearSearchResults(), e.connectivityProcessed && ((i = r.mapImp) == null || i.setPaint({ dimmed: !0 }))) : this.scaffoldRef && l && l.changeHighlightedByName(s, "", !1)), this.highlightDelay = setTimeout(() => {
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(n.length || s.length || o || a.length) && ((this.multiflatmapRef || this.flatmapRef) && r ? this.flatmapHighlight(r, n, o, a).then((c) => {
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try {
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r.showConnectivityTooltips({
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connectivityInfo: { featureId: c },
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data: []
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});
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} catch (
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if (console.log(
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} catch (h) {
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onNeuronConnectionClick: function(e) {
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showConnectivitiesByReference: function() {
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showConnectivityTooltips: function() {
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setVisibilityFilter: function() {
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const t = e.mapImp, i = H(t), n = F(new P());
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this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), this.connectivityFilterOptions[o] || (this.connectivityFilterOptions[o] = await e.getFilterOptions()), this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivityFilterSources[o] || (this.connectivityFilterSources[o] = e.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources),
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this.connectivitiesStore.updateGlobalConnectivities(this.connectivityKnowledge), this.connectivityFilterOptions[o] || (this.connectivityFilterOptions[o] = await e.getFilterOptions()), this.connectivitiesStore.updateFilterOptions(this.connectivityFilterOptions), this.connectivityFilterSources[o] || (this.connectivityFilterSources[o] = e.getFilterSources()), this.connectivitiesStore.updateFilterSources(this.connectivityFilterSources), f.emit("species-layout-connectivity-update");
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data: function() {
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import { _ as
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import { FlatmapVuer as C } from "@abi-software/flatmapvuer";
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import { resolveComponent as p, openBlock as f, createElementBlock as M, createVNode as I, createBlock as v, createCommentVNode as S } from "vue";
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name: "Flatmap",
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mixins: [g, y],
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components: {
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e.mapImp, r.emit("mapImpProv", n), this.$emit("flatmap-provenance-ready", n), this.flatmapReadyForMarkerUpdates(e), this.updateViewerSettings(), this.loadConnectivityExplorerConfig(e), r.emit("mapLoaded", e);
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t && t.moveMap(n, {
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if (
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a ? (n && t.selectFeatures(a), t.zoomToFeatures(a)) : t.clearSearchResults();
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}
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} else
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t.clearSearchResults();
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},
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changeViewingMode: function(e) {
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this.$refs.flatmap.changeViewingMode(e);
|
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@@ -118,12 +118,19 @@ const w = {
|
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updateViewerSettings: function() {
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const {
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backgroundDisplay: e,
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viewingMode:
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flightPathDisplay:
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organsDisplay:
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outlinesDisplay: i
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viewingMode: n,
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flightPathDisplay: o,
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organsDisplay: t,
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outlinesDisplay: i,
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connectionType: a
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} = this.settingsStore.globalSettings, l = this.$refs.flatmap;
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l.changeViewingMode(n), l.setFlightPath3D(o), l.setColour(t), l.setOutlines(i), l.backgroundChangeCallback(e), l.setConnectionType(a);
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},
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setVisibilityFilter: function(e) {
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if (this != null && this.alive) {
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const n = this.$refs.flatmap;
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n && n.setVisibilityFilter(e);
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}
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}
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},
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computed: {
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@@ -131,15 +138,15 @@ const w = {
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return this.settingsStore.facets.species;
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}
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}
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},
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function
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const
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return
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}, F = { class: "viewer-container" };
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function b(e, n, o, t, i, a) {
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+
const l = p("FlatmapVuer"), m = p("HelpModeDialog");
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return f(), M("div", F, [
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I(l, {
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state: e.entry.state,
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entry: e.entry.resource,
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mapManager: e.mapManager,
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onResourceSelected:
|
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onResourceSelected: n[0] || (n[0] = (c) => a.flatmaprResourceSelected(e.entry.type, c)),
|
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onPanZoomCallback: e.flatmapPanZoomCallback,
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name: e.entry.resource,
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style: { height: "100%", width: "100%" },
|
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@@ -158,10 +165,12 @@ function F(e, t, a, n, i, o) {
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onConnectivityInfoOpen: e.onConnectivityInfoOpen,
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onConnectivityError: e.onConnectivityError,
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onConnectivityInfoClose: e.onConnectivityInfoClose,
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onNeuronConnectionClick: e.onNeuronConnectionClick,
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onNeuronConnectionFeatureClick: e.onNeuronConnectionFeatureClick,
|
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connectivityInfoSidebar: e.connectivityInfoSidebar,
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pathControls: !0,
|
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ref: "flatmap",
|
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|
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onReady:
|
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|
+
onReady: a.flatmapReadyCall,
|
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displayMinimap: !1,
|
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displayWarning: !0,
|
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enableOpenMapUI: !0,
|
|
@@ -170,20 +179,20 @@ function F(e, t, a, n, i, o) {
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showLocalSettings: e.showLocalSettings,
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showOpenMapButton: e.showOpenMapButton,
|
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onOpenMap: e.openMap,
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onPathwaySelectionChanged:
|
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|
+
onPathwaySelectionChanged: a.onPathwaySelectionChanged,
|
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onMapmanagerLoaded: e.onMapmanagerLoaded
|
|
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|
-
}, null, 8, ["state", "entry", "mapManager", "onPanZoomCallback", "name", "minZoom", "helpMode", "helpModeActiveItem", "helpModeDialog", "onHelpModeLastItem", "onShownTooltip", "onShownMapTooltip", "onAnnotationOpen", "onAnnotationClose", "onUpdateOfflineAnnotationEnabled", "annotationSidebar", "onConnectivityInfoOpen", "onConnectivityError", "onConnectivityInfoClose", "connectivityInfoSidebar", "onReady", "flatmapAPI", "sparcAPI", "showLocalSettings", "showOpenMapButton", "onOpenMap", "onPathwaySelectionChanged", "onMapmanagerLoaded"]),
|
|
176
|
-
e.helpMode && e.useHelpModeDialog ? (
|
|
184
|
+
}, null, 8, ["state", "entry", "mapManager", "onPanZoomCallback", "name", "minZoom", "helpMode", "helpModeActiveItem", "helpModeDialog", "onHelpModeLastItem", "onShownTooltip", "onShownMapTooltip", "onAnnotationOpen", "onAnnotationClose", "onUpdateOfflineAnnotationEnabled", "annotationSidebar", "onConnectivityInfoOpen", "onConnectivityError", "onConnectivityInfoClose", "onNeuronConnectionClick", "onNeuronConnectionFeatureClick", "connectivityInfoSidebar", "onReady", "flatmapAPI", "sparcAPI", "showLocalSettings", "showOpenMapButton", "onOpenMap", "onPathwaySelectionChanged", "onMapmanagerLoaded"]),
|
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+
e.helpMode && e.useHelpModeDialog ? (f(), v(m, {
|
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key: 0,
|
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ref: "flatmapHelp",
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flatmapRef: e.flatmapRef,
|
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180
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lastItem: e.helpModeLastItem,
|
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181
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onShowNext: e.onHelpModeShowNext,
|
|
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onFinishHelpMode: e.onFinishHelpMode
|
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|
-
}, null, 8, ["flatmapRef", "lastItem", "onShowNext", "onFinishHelpMode"])) :
|
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|
+
}, null, 8, ["flatmapRef", "lastItem", "onShowNext", "onFinishHelpMode"])) : S("", !0)
|
|
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193
|
]);
|
|
185
194
|
}
|
|
186
|
-
const
|
|
195
|
+
const T = /* @__PURE__ */ d(w, [["render", b], ["__scopeId", "data-v-9328c2b0"]]);
|
|
187
196
|
export {
|
|
188
|
-
|
|
197
|
+
T as default
|
|
189
198
|
};
|
|
@@ -1,6 +1,6 @@
|
|
|
1
|
-
import { C as r } from "./ContentMixin-
|
|
1
|
+
import { C as r } from "./ContentMixin-CGhcj7xh.js";
|
|
2
2
|
import { openBlock as o, createElementBlock as t, createElementVNode as s } from "vue";
|
|
3
|
-
import { _ as n } from "./index-
|
|
3
|
+
import { _ as n } from "./index-Dm85KBw6.js";
|
|
4
4
|
const a = {
|
|
5
5
|
name: "Iframe",
|
|
6
6
|
mixins: [r]
|