@abi-software/map-side-bar 1.2.2 → 1.2.3-hardcoded-1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/map-side-bar.common.js +309 -108
- package/dist/map-side-bar.common.js.map +1 -1
- package/dist/map-side-bar.css +1 -1
- package/dist/map-side-bar.umd.js +309 -108
- package/dist/map-side-bar.umd.js.map +1 -1
- package/dist/map-side-bar.umd.min.js +1 -1
- package/dist/map-side-bar.umd.min.js.map +1 -1
- package/package.json +1 -1
- package/src/components/ContextCard.vue +25 -6
- package/src/components/DatasetCard.vue +2 -1
- package/src/components/SidebarContent.vue +7 -5
- package/src/components/hardcoded-context-info.js +211 -2
package/dist/map-side-bar.umd.js
CHANGED
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@@ -159,6 +159,17 @@ module.exports = require("core-js/modules/es.array.concat");
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/***/ }),
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_5dcf465c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("872a");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_5dcf465c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_5dcf465c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__);
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/* unused harmony default export */ var _unused_webpack_default_export = (_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_5dcf465c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default.a);
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_75e03782_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("f86d");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_75e03782_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_75e03782_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__);
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/* unused harmony default export */ var _unused_webpack_default_export = (_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_DatasetCard_vue_vue_type_style_index_0_id_75e03782_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default.a);
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module.exports = require("@abi-software/svg-sprite");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_e348049c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("21a5");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_e348049c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_e348049c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__);
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/* unused harmony default export */ var _unused_webpack_default_export = (_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_e348049c_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default.a);
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_41eb07ec_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("3cbb");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_41eb07ec_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_ContextCard_vue_vue_type_style_index_0_id_41eb07ec_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__);
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_SidebarContent_vue_vue_type_style_index_0_id_2df4e2e0_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("e743");
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_SidebarContent_vue_vue_type_style_index_0_id_2df4e2e0_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_SidebarContent_vue_vue_type_style_index_0_id_2df4e2e0_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__);
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/* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_SidebarContent_vue_vue_type_style_index_0_id_39cef630_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("7963");
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/* unused harmony default export */ var _unused_webpack_default_export = (_node_modules_mini_css_extract_plugin_dist_loader_js_ref_6_oneOf_1_0_node_modules_vue_cli_service_node_modules_css_loader_dist_cjs_js_ref_6_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_6_oneOf_1_2_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_SidebarContent_vue_vue_type_style_index_0_id_39cef630_scoped_true_lang_css___WEBPACK_IMPORTED_MODULE_0___default.a);
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var SidebarContentvue_type_template_id_39cef630_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('el-card',{staticClass:"content-card",attrs:{"body-style":_vm.bodyStyle}},[_c('div',{staticClass:"header",attrs:{"slot":"header"},slot:"header"},[(_vm.contextCardEntry && _vm.contextCardEnabled)?_c('context-card',{attrs:{"entry":_vm.contextCardEntry}}):_vm._e(),_c('el-input',{staticClass:"search-input",attrs:{"placeholder":"Search","clearable":""},on:{"clear":_vm.clearSearchClicked},nativeOn:{"keyup":function($event){return _vm.searchEvent($event)}},model:{value:(_vm.searchInput),callback:function ($$v) {_vm.searchInput=$$v},expression:"searchInput"}}),_c('el-button',{staticClass:"button",on:{"click":_vm.searchEvent}},[_vm._v("Search")])],1),_c('SearchFilters',{ref:"filtersRef",staticClass:"filters",attrs:{"entry":_vm.filterEntry,"envVars":_vm.envVars},on:{"filterResults":_vm.filterUpdate,"numberPerPage":_vm.numberPerPageUpdate,"loading":_vm.filtersLoading}}),_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loadingCards),expression:"loadingCards"}],ref:"content",staticClass:"content scrollbar"},[(_vm.results.length === 0 && !_vm.loadingCards && !_vm.sciCrunchError)?_c('div',{staticClass:"error-feedback"},[_vm._v("No results found - Please change your search / filter criteria.")]):_vm._e(),(_vm.sciCrunchError)?_c('div',{staticClass:"error-feedback"},[_vm._v(_vm._s(_vm.sciCrunchError))]):_vm._e(),(_vm.loadingScicrunch)?_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loadingScicrunch),expression:"loadingScicrunch"}],staticClass:"loading-icon"}):_vm._e(),_vm._l((_vm.results),function(result){return _c('div',{key:result.id,staticClass:"step-item"},[_c('DatasetCard',{attrs:{"entry":result,"envVars":_vm.envVars},on:{"contextUpdate":_vm.contextCardUpdate}})],1)}),_c('el-pagination',{staticClass:"pagination",attrs:{"current-page":_vm.page,"hide-on-single-page":"","large":"","layout":"prev, pager, next","page-size":_vm.numberPerPage,"total":_vm.numberOfHits},on:{"update:currentPage":function($event){_vm.page=$event},"update:current-page":function($event){_vm.page=$event},"current-change":_vm.pageChange}})],2)],1)}
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// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"258ee7b8-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/DatasetCard.vue?vue&type=template&id=5dcf465c&scoped=true&
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var DatasetCardvue_type_template_id_5dcf465c_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{ref:"container",staticClass:"dataset-card-container"},[_c('div',{ref:"card",class:_vm.expanded ? 'dataset-card-expanded' : 'dataset-card'},[(_vm.entry.id !== 0)?_c('div',{staticClass:"seperator-path"}):_vm._e(),_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"card"},[_c('span',{staticClass:"card-left"},[_c('img',{staticClass:"banner-img",attrs:{"svg-inline":"","src":_vm.thumbnail},on:{"click":_vm.openDataset}})]),_c('div',{staticClass:"card-right"},[_c('div',{staticClass:"title",on:{"click":_vm.cardClicked}},[_vm._v(_vm._s(_vm.entry.name))]),_c('div',{staticClass:"details"},[_vm._v(_vm._s(_vm.contributors)+" "+_vm._s(_vm.entry.publishDate ? ("(" + _vm.publishYear + ")") : ''))]),_c('div',{staticClass:"details"},[_vm._v(_vm._s(_vm.samples))]),_c('div',{staticClass:"details"},[_vm._v("id: "+_vm._s(_vm.discoverId))]),_c('div',[(!_vm.entry.simulation)?_c('el-button',{staticClass:"button",attrs:{"size":"mini","icon":"el-icon-coin"},on:{"click":_vm.openDataset}},[_vm._v("View dataset")]):_vm._e()],1),_c('div',[(_vm.entry.scaffolds)?_c('el-button',{staticClass:"button",attrs:{"size":"mini","icon":"el-icon-view"},on:{"click":_vm.openScaffold}},[_vm._v("View scaffold")]):_vm._e()],1),_c('div',[(_vm.hasCSVFile)?_c('el-button',{staticClass:"button",attrs:{"size":"mini","icon":"el-icon-view"},on:{"click":_vm.openPlot}},[_vm._v("View plot")]):_vm._e()],1),_c('div',[(_vm.entry.simulation)?_c('el-button',{staticClass:"button",attrs:{"size":"mini","icon":"el-icon-view"},on:{"click":_vm.openRepository}},[_vm._v("View repository")]):_vm._e()],1),_c('div',[(_vm.entry.simulation)?_c('el-button',{staticClass:"button",attrs:{"size":"mini","icon":"el-icon-view"},on:{"click":_vm.openSimulation}},[_vm._v("View simulation")]):_vm._e()],1)])]),((_vm.cardOverflow && !_vm.expanded))?_c('p',{staticClass:"read-more"},[_c('el-button',{staticClass:"read-more-button",on:{"click":_vm.expand}},[_vm._v("Read more...")])],1):_vm._e()])])}
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221: {
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"description": "3D digital tracings of the enteric plexus obtained from seven subjects (M11, M16, M134, M162, M163, M164, M168) are mapped randomly on mouse proximal colon. The data depicts individual neural wiring patterns in enteric microcircuits, and revealed both neuron and fiber units wired in a complex organization.",
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"heading": "Digital tracings of enteric plexus",
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"id": "sparc.science.context_data",
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"samples": [{
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"annotation": "",
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"description": "Neuronal soma and fibers in a myenteric ganglion in this subject are annotated into the following groups to highlight their interactions:\n\nNeuron1,2,3 Connex: Connections between 3 neurons and cross-ganglionic fibers\n\nNeuron4_Connex: A small neuron contacts fibers passing the ganglion\n\nNeuron5: Multiple projections of a neuron in an myenteric ganglion\n\nNeuron5,3,7 Connex: Connections between 3 neurons, nerve fibers, IGNEx (complex type of intraganglionic nerve endings) and fibers in the circular muscles.\n\nNeuron8,9,10 Connex: Connections of 3 neurons with each other and with long passing fibers. \n\nIntraganglionic Nerve Ending (IGNE): Digital traces of neurites consist of complex intraganglionic nerve endings. The blue fiber has branched terminals, more likely the afferent nerve endings; the violet and cyan terminals also interweave into the fiber nest; the orange, pink and peach fibers and one process of the neuron cross the IGNE to make 1-2 conjunctions.",
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"doi": "",
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"heading": "Digital tracing for subject M11 ",
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"id": "Sample 1",
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"path": "derivative/sub-M11/sam-pCm11/digital-traces/pC PHPS XFP M11 20XZ 180425_180713_2_NL_20.xml",
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"view": "View 1"
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}, {
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"annotation": "",
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"description": "Digital traces demonstrate some types of wiring. A long process of the green neuron terminates in the intraganglionic nerve endings (IGNE) while in contact with a nerve fiber (cyan), soma of a neuron (peach) and processes of 3 neurons (magenta, yellow and red). Two neurons and one fiber are traced to an IGNE.",
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"doi": "",
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"heading": "Digital tracing for subject M16",
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"id": "Sample 2",
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"path": "derivative/sub-M16/sam-pCm16/digital-traces/pC PHPS XFP M16 20XZ 180425_180524.xml",
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"view": "View 2"
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}, {
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"annotation": "",
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"description": "Digital traces demonstrate how the nerve fibers (dark green and orange) contact several neurons and/or run together with other fibers.",
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"doi": "",
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"heading": "Digital tracing for subject M134",
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"id": "Sample 3",
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"path": "derivative/sub-M134/sam-pCm134/digital-traces/pC XFP M134 20XZ 190806_191012_200130D_lx.xml",
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"view": "View 3"
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}, {
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"annotation": "",
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"description": "Various types of labeled neurons located in one large ganglion. Long nerve fibers from different directions cross the ganglion, and two fibers (magenta and green) run closely apposed in segments with axons of neurons (white and red). Two axons (aqua and peach on the top) are adjacent to each other, as well as two somas (red and yellow). One neuron (cyan) displays complex wiring with neurons nearby via the axon-soma, axon-dendritic and axon-axon contacts. Vertically projecting fibers in the left side are the fibers innervating the circular muscle. ",
|
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"doi": "",
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"heading": "Digital tracing for subject M162",
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"id": "Sample 4",
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"path": "derivative/sub-M162/sam-pCm162/digital-traces/pCm162_AAV_Z_20x_20200204_S1D_lx_li_z-flip.xml",
|
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"view": "View 4"
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+
}, {
|
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"annotation": "",
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"description": "Digital tracings from subject M163 are annotated into the following groups to highlight their interactions:\n\nF peach connex: A nerve fiber (peach) displays close appositions with a few neuronal processes. \n\nInterganglionic strand joined by Ns Fs:Axons (with contacts) and a long crossing fiber (dark green) join an interganglionic strand.\n\nN12 Connex: One neuron (green) is in contact with four others via axon-soma, axon-dendrites and axon-axon connections, as well as one passing fiber.\n",
|
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|
+
"doi": "",
|
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2101
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+
"heading": "Digital tracing for subject M163",
|
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+
"id": "Sample 5",
|
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"path": "derivative/sub-M163/sam-pCm163/digital-traces/pCm163_AAV_Z_20x_20200206_S3-ab.xml",
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"view": "View 5"
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}, {
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"annotation": "",
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"description": "Digital tracings for subject M164 demonstrates wiring of neuronal clusters.",
|
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"doi": "",
|
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2109
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+
"heading": "Digital tracing for subject M164",
|
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|
+
"id": "Sample 6",
|
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"path": "derivative/sub-M164/sam-pCm164/digital-traces/pCm164_AAV_Z_20x_20200211_S2A.xml",
|
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"view": "View 6"
|
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}, {
|
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"annotation": "",
|
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"description": "Digital tracings from subject M168 are annotated into the following groups to highlight their interactions:\n\nF Beige connex: Connections of one ganglion-crossing fiber (beige) with neurons and ganglion-crossing nerve fibers. \n\nF Green connex : Interganglionic connections.\n\nInterganglionic connex: Connections of one ganglion-crossing fiber (green) with neurons in two ganglia and ganglion-crossing nerve fibers. A nerve fiber (red) runs a long distance together with another fiber (green). \n\nIntraganglionic strand: Ganglia crossing fibers and axons of neurons join an interganglionic strand.",
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"doi": "",
|
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"heading": "Digital tracing for subject M168",
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"id": "Sample 7",
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"path": "derivative/sub-M168/digital-traces/pCm168_AAV_Z_20x_191211_S3B_lx.xml",
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"view": "View 7"
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}],
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"version": "0.1.0",
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"views": [{
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"annotation": "",
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"description": "Digital tracing of neurons for subject M16.",
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"id": "View 2",
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"path": "derivative/Scaffolds/AAV_M16_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M16_thumbnail.jpeg"
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}, {
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"annotation": "",
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"description": "Digital tracing of neurons for subject M134.",
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"id": "View 3",
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"path": "derivative/Scaffolds/AAV_M134_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M134_thumbnail.jpeg"
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}, {
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"annotation": "",
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"description": "Digital tracing of neurons for subject M162.",
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"id": "View 4",
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"path": "derivative/Scaffolds/AAV_M162_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M162_thumbnail.jpeg"
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}, {
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"annotation": "",
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"description": "Digital tracing of neurons for subject M163.",
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"id": "View 5",
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"path": "derivative/Scaffolds/AAV_M163_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M163_thumbnail.jpeg"
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}, {
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"annotation": "",
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"description": "Digital tracing of neurons for subject M164.",
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"id": "View 6",
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"path": "derivative/Scaffolds/AAV_M164_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M164_thumbnail.jpeg"
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}, {
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"annotation": "",
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2160
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"description": "Digital tracing of neurons for subject M168.",
|
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+
"id": "View 7",
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"path": "derivative/Scaffolds/AAV_M168_view.json",
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"sample": "Sample 7",
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"thumbnail": "derivative/Scaffolds/AAV_M168_thumbnail.jpeg"
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}, {
|
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"annotation": "",
|
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|
+
"description": "Digital tracing of neurons for subject M11.",
|
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|
+
"id": "View 1",
|
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|
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"path": "derivative/Scaffolds/AAV_M11_view.json",
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"sample": "Sample 1",
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"thumbnail": "derivative/Scaffolds/AAV_M11_thumbnail.jpeg"
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}]
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},
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125: {
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"description": "Cumulative distributions of retrogradely labeled motor neurons from 8 inter-tenial longitudinal muscle preparations and 7 preparations from the tenial region are mapped onto the human colon scaffold. \n\nNote that the distributions are mapped to the descending colon but consistent pattern were observed along the entire length of the colon.",
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"heading": "Mapped LMMN projections",
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"id": "sparc.science.context_data",
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2178
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"samples": [{
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"annotation": "",
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"description": "Excitatory motor neurons (ChAT+) are predominantly located aboral to the DiI application site, whereas inhibitory motor neurons (NOS+) are scattered across the distribution.",
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}, {
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"description": "Relative contraction and mean luminal pressure (represented by a color field with red as high pressure and blue as low pressure) are mapped on the proximal, transverse and distal sections of the pig colon scaffold. Only sections monitored with manometry probes are displayed here and these sections are not contiguous. \n\nBaseline data was collected for 30min, followed by 15min of stimulation and 30min of post-stimulation.\n\nDuring stimulation, the distal colon was also observed to display longitudinal contraction which is not captured on the scaffold due to the lack of measurements. \n\n",
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"description": "Relative contraction and mean luminal pressure (represented by a color field with red as high pressure and blue as low pressure) are mapped on the proximal, transverse and distal sections of the pig colon scaffold. Only sections monitored with manometry probes are displayed here and these sections are not contiguous. \n\nBaseline data was collected for 15min, followed by 10min of stimulation and 30min of post-stimulation.",
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"heading": "Acute CBVN 300us pulse-train without block",
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}); // //Uncomment the code below to add in hardcoded data
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// "description": "This dataset contains single cell scale anatomical map of the rat intrinsic cardiac nervous system (ICNS) across four male and three female hearts. These cell clusters can be seen by the yellow data points on the image as well as spherical markers on the 3D heart scaffold. The dataset provides an integrative framework to visualise the spatial distribution of ICNS across different hearts.",
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// CONCATENATED MODULE: ./src/components/DatasetCard.vue?vue&type=script&lang=js&
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/* harmony default export */ var components_DatasetCardvue_type_script_lang_js_ = (DatasetCardvue_type_script_lang_js_);
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/* harmony default export */ var DatasetCard = (DatasetCard_component.exports);
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// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"258ee7b8-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ContextCard.vue?vue&type=template&id=
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// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"258ee7b8-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ContextCard.vue?vue&type=template&id=e348049c&scoped=true&
|
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var ContextCardvue_type_template_id_e348049c_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{ref:"container",staticClass:"context-card-container"},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showContextCard),expression:"showContextCard"}]},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showDetails),expression:"showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Hide information"),_c('i',{staticClass:"el-icon-arrow-up"})]),_c('div',{directives:[{name:"show",rawName:"v-show",value:(!_vm.showDetails),expression:"!showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Show information"),_c('i',{staticClass:"el-icon-arrow-down"})]),(_vm.showDetails && Object.keys(_vm.contextData).length !== 0)?_c('el-card',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"context-card card"},[_c('div',{staticClass:"card-left"},[_c('img',{staticClass:"context-image",attrs:{"src":_vm.entry.banner}})]),_c('div',{staticClass:"card-right"},[_c('div',{staticClass:"title"},[_vm._v(_vm._s(_vm.contextData.heading))]),_c('div',[_vm._v(_vm._s(_vm.contextData.description))]),_c('br'),(_vm.contextData.views && _vm.contextData.views.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Scaffold Views")]):_vm._e(),_vm._l((_vm.contextData.views),function(view,i){return [_c('span',{key:i+'_1',staticClass:"context-card-item",on:{"click":function($event){return _vm.openViewFile(view)}}},[_c('img',{staticClass:"key-image",attrs:{"src":_vm.getFileFromPath(view.thumbnail)}}),_vm._v(" "+_vm._s(view.description)+" ")]),_c('br',{key:i})]}),_c('div',{staticStyle:{"margin-bottom":"16px"}}),(_vm.contextData.samples && _vm.contextData.samples.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Samples on Scaffold")]):_vm._e(),_vm._l((_vm.contextData.samples),function(sample,i){return [_c('span',{key:i+'_3',staticClass:"context-card-item",on:{"click":function($event){return _vm.toggleSampleDetails(i)}}},[_c('div',{key:i+'_6',staticStyle:{"display":"flex"}},[(sample.color)?_c('div',{staticClass:"color-box",style:('background-color:'+ sample.color)}):(sample.thumbnail)?_c('img',{staticClass:"key-image",attrs:{"src":_vm.getFileFromPath(sample.thumbnail)}}):_vm._e(),_vm._v(" "+_vm._s(sample.heading)+" "),_c('i',{staticClass:"el-icon-warning-outline info"})])]),(_vm.sampleDetails[i])?_c('div',{key:i+'_4'},[_vm._v(" "+_vm._s(sample.description)+" "),(_vm.sampleDetails[i])?_c('a',{key:i+'_5',attrs:{"href":_vm.generateFileLink(sample.path),"target":"_blank"}},[_vm._v("View Source")]):_vm._e()]):_vm._e(),_c('br',{key:i+'_2'})]})],2)]):_vm._e()],1)])}
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var ContextCardvue_type_template_id_e348049c_scoped_true_staticRenderFns = []
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// CONCATENATED MODULE: ./src/components/ContextCard.vue?vue&type=template&id=e348049c&scoped=true&
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var es_number_is_finite_ = __webpack_require__("dbad");
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// EXTERNAL MODULE: external "element-ui/lib/theme-chalk/link.css"
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var link_css_ = __webpack_require__("230a");
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// CONCATENATED MODULE: ./src/components/ContextCard.vue?vue&type=script&lang=js&
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/* harmony default export */ var components_ContextCardvue_type_script_lang_js_ = (ContextCardvue_type_script_lang_js_);
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// EXTERNAL MODULE: ./src/components/ContextCard.vue?vue&type=style&index=0&id=
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var
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// EXTERNAL MODULE: ./src/components/ContextCard.vue?vue&type=style&index=0&id=e348049c&scoped=true&lang=css&
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var ContextCardvue_type_style_index_0_id_e348049c_scoped_true_lang_css_ = __webpack_require__("42ed");
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// CONCATENATED MODULE: ./src/components/ContextCard.vue
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var ContextCard_component = normalizeComponent(
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ContextCardvue_type_template_id_e348049c_scoped_true_render,
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ContextCardvue_type_template_id_e348049c_scoped_true_staticRenderFns,
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openSearch: function openSearch(
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|
|
2984
3185
|
var query = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : '';
|
|
2985
3186
|
// Algolia search
|
|
2986
3187
|
this.algoliaClient.search(getFilters(filters), query, this.numberPerPage, this.page).then(function (searchData) {
|
|
2987
|
-
|
|
2988
|
-
|
|
2989
|
-
|
|
2990
|
-
|
|
2991
|
-
|
|
2992
|
-
|
|
2993
|
-
|
|
2994
|
-
'dois':
|
|
3188
|
+
_this2.numberOfHits = searchData.total;
|
|
3189
|
+
_this2.discoverIds = searchData.discoverIds;
|
|
3190
|
+
_this2.dois = searchData.dois;
|
|
3191
|
+
_this2.results = searchData.items;
|
|
3192
|
+
_this2.loadingCards = false;
|
|
3193
|
+
|
|
3194
|
+
_this2.searchSciCrunch({
|
|
3195
|
+
'dois': _this2.dois
|
|
2995
3196
|
});
|
|
2996
3197
|
});
|
|
2997
3198
|
},
|
|
@@ -3008,7 +3209,7 @@ var initial_state = {
|
|
|
3008
3209
|
this.searchAlgolia(this.filters, this.searchInput, this.numberPerPage, this.page);
|
|
3009
3210
|
},
|
|
3010
3211
|
searchSciCrunch: function searchSciCrunch(params) {
|
|
3011
|
-
var
|
|
3212
|
+
var _this3 = this;
|
|
3012
3213
|
|
|
3013
3214
|
this.loadingScicrunch = true;
|
|
3014
3215
|
this.scrollToTop();
|
|
@@ -3019,18 +3220,18 @@ var initial_state = {
|
|
|
3019
3220
|
this.callSciCrunch(this.envVars.API_LOCATION, params).then(function (result) {
|
|
3020
3221
|
//Only process if the search term is the same as the last search term.
|
|
3021
3222
|
//This avoid old search being displayed.
|
|
3022
|
-
|
|
3223
|
+
_this3.sciCrunchError = false;
|
|
3023
3224
|
|
|
3024
|
-
|
|
3225
|
+
_this3.resultsProcessing(result);
|
|
3025
3226
|
|
|
3026
|
-
|
|
3027
|
-
|
|
3028
|
-
|
|
3227
|
+
_this3.$refs.content.style["overflow-y"] = "scroll";
|
|
3228
|
+
_this3.loadingCards = false;
|
|
3229
|
+
_this3.loadingScicrunch = false;
|
|
3029
3230
|
}).catch(function (result) {
|
|
3030
3231
|
if (result.name !== 'AbortError') {
|
|
3031
|
-
|
|
3032
|
-
|
|
3033
|
-
|
|
3232
|
+
_this3.loadingCards = false;
|
|
3233
|
+
_this3.loadingScicrunch = false;
|
|
3234
|
+
_this3.sciCrunchError = result.message;
|
|
3034
3235
|
}
|
|
3035
3236
|
});
|
|
3036
3237
|
},
|
|
@@ -3047,7 +3248,7 @@ var initial_state = {
|
|
|
3047
3248
|
this.page = 1;
|
|
3048
3249
|
},
|
|
3049
3250
|
resultsProcessing: function resultsProcessing(data) {
|
|
3050
|
-
var
|
|
3251
|
+
var _this4 = this;
|
|
3051
3252
|
|
|
3052
3253
|
this.lastSearch = this.searchInput;
|
|
3053
3254
|
|
|
@@ -3057,14 +3258,14 @@ var initial_state = {
|
|
|
3057
3258
|
|
|
3058
3259
|
data.results.forEach(function (element) {
|
|
3059
3260
|
// match the scicrunch result with algolia result
|
|
3060
|
-
var i =
|
|
3261
|
+
var i = _this4.results.findIndex(function (res) {
|
|
3061
3262
|
return res.name === element.name;
|
|
3062
3263
|
}); // Assign scicrunch results to the object
|
|
3063
3264
|
|
|
3064
3265
|
|
|
3065
|
-
Object.assign(
|
|
3266
|
+
Object.assign(_this4.results[i], element); // Assign the attributes that need some processing
|
|
3066
3267
|
|
|
3067
|
-
Object.assign(
|
|
3268
|
+
Object.assign(_this4.results[i], {
|
|
3068
3269
|
numberSamples: element.sampleSize ? parseInt(element.sampleSize) : 0,
|
|
3069
3270
|
numberSubjects: element.subjectSize ? parseInt(element.subjectSize) : 0,
|
|
3070
3271
|
updated: element.updated[0].timestamp.split("T")[0],
|
|
@@ -3081,7 +3282,7 @@ var initial_state = {
|
|
|
3081
3282
|
contextualInformation: element['abi-contextual-information'].length > 0 ? element['abi-contextual-information'] : undefined,
|
|
3082
3283
|
simulation: element['abi-simulation-file']
|
|
3083
3284
|
});
|
|
3084
|
-
external_vue_default.a.set(
|
|
3285
|
+
external_vue_default.a.set(_this4.results, i, _this4.results[i]);
|
|
3085
3286
|
});
|
|
3086
3287
|
},
|
|
3087
3288
|
createfilterParams: function createfilterParams(params) {
|
|
@@ -3104,17 +3305,17 @@ var initial_state = {
|
|
|
3104
3305
|
return p.toString();
|
|
3105
3306
|
},
|
|
3106
3307
|
callSciCrunch: function callSciCrunch(apiLocation) {
|
|
3107
|
-
var
|
|
3308
|
+
var _this5 = this;
|
|
3108
3309
|
|
|
3109
3310
|
var params = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : {};
|
|
3110
3311
|
return new Promise(function (resolve, reject) {
|
|
3111
3312
|
// the following controller will abort current search
|
|
3112
3313
|
// if a new one has been started
|
|
3113
|
-
if (
|
|
3114
|
-
|
|
3115
|
-
var signal =
|
|
3314
|
+
if (_this5._controller) _this5._controller.abort();
|
|
3315
|
+
_this5._controller = new AbortController();
|
|
3316
|
+
var signal = _this5._controller.signal; // Add parameters if we are sent them
|
|
3116
3317
|
|
|
3117
|
-
var fullEndpoint =
|
|
3318
|
+
var fullEndpoint = _this5.envVars.API_LOCATION + _this5.searchEndpoint + "?" + _this5.createfilterParams(params);
|
|
3118
3319
|
|
|
3119
3320
|
fetch(fullEndpoint, {
|
|
3120
3321
|
signal: signal
|
|
@@ -3147,8 +3348,8 @@ var initial_state = {
|
|
|
3147
3348
|
});
|
|
3148
3349
|
// CONCATENATED MODULE: ./src/components/SidebarContent.vue?vue&type=script&lang=js&
|
|
3149
3350
|
/* harmony default export */ var components_SidebarContentvue_type_script_lang_js_ = (SidebarContentvue_type_script_lang_js_);
|
|
3150
|
-
// EXTERNAL MODULE: ./src/components/SidebarContent.vue?vue&type=style&index=0&id=
|
|
3151
|
-
var
|
|
3351
|
+
// EXTERNAL MODULE: ./src/components/SidebarContent.vue?vue&type=style&index=0&id=39cef630&scoped=true&lang=css&
|
|
3352
|
+
var SidebarContentvue_type_style_index_0_id_39cef630_scoped_true_lang_css_ = __webpack_require__("e941");
|
|
3152
3353
|
|
|
3153
3354
|
// CONCATENATED MODULE: ./src/components/SidebarContent.vue
|
|
3154
3355
|
|
|
@@ -3161,11 +3362,11 @@ var SidebarContentvue_type_style_index_0_id_2df4e2e0_scoped_true_lang_css_ = __w
|
|
|
3161
3362
|
|
|
3162
3363
|
var SidebarContent_component = normalizeComponent(
|
|
3163
3364
|
components_SidebarContentvue_type_script_lang_js_,
|
|
3164
|
-
|
|
3165
|
-
|
|
3365
|
+
SidebarContentvue_type_template_id_39cef630_scoped_true_render,
|
|
3366
|
+
SidebarContentvue_type_template_id_39cef630_scoped_true_staticRenderFns,
|
|
3166
3367
|
false,
|
|
3167
3368
|
null,
|
|
3168
|
-
"
|
|
3369
|
+
"39cef630",
|
|
3169
3370
|
null
|
|
3170
3371
|
|
|
3171
3372
|
)
|