@abi-software/flatmapvuer 1.4.4 → 1.5.1

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Files changed (6) hide show
  1. package/dist/flatmapvuer.js +3910 -3856
  2. package/dist/flatmapvuer.umd.cjs +2 -2
  3. package/dist/style.css +1 -1
  4. package/package.json +1 -1
  5. package/src/components/FlatmapVuer.vue +6 -6
  6. package/src/services/flatmapQueries.js +133 -14
package/dist/flatmapvuer.umd.cjs CHANGED
@@ -30,7 +30,7 @@ usage: app.provide(ID_INJECTION_KEY, {
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  <circle cx="12.5" cy="12.5" r="9" fill="#fff"></circle>
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  <text x="12" y="17.5" style="font-size:14px;fill:#000;text-anchor:middle">2</text>
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  </svg>
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- </div>`,Qv=function(t){return t?[...new Set(t.map(e=>JSON.stringify(e)))].map(e=>JSON.parse(e)):[]},Xc={},Dk=async function(t,e){return Xc&&Xc.hasOwnProperty(e)?Xc[e]:new Promise(r=>{fetch(`${t}knowledge/label/${e}`,{method:"GET"}).then(n=>n.json()).then(n=>{let i=n.label;i==="Mammalia"&&(i="Mammalia not otherwise specified"),Xc[e]=i,r(i)}).catch(n=>{console.error("Error:",n),Xc[e]=e,r(e)})})},Bk=function(t,e){if(!t||!e)return!1;let r=JSON.stringify(t),n=JSON.stringify(e);return r.indexOf(n)!==-1};let A2t=function(){this.initialise=function(t){this.flatmapApi=t,this.destinations=[],this.origins=[],this.components=[],this.urls=[],this.controller=void 0,this.uberons=[],this.lookUp=[]},this.createTooltipData=async function(t){let e=[];t.feature.hyperlinks&&t.feature.hyperlinks.length>0?e=t.feature.hyperlinks:e=this.urls.map(i=>({url:i,id:"pubmed"}));let r;if(t.provenanceTaxonomy){r=[];for(let i=0;t.provenanceTaxonomy.length>i;i++)r.push(await 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e=t.connectivity.flat(),r=Qv(e),n=[],i=!1;return r.forEach(o=>{i=!1,Bk(t.axons,o)&&(i=!0),Bk(t.dendrites,o)&&(i=!0),i||n.push(o)}),n},this.retrieveFlatmapKnowledgeForEvent=async function(t){this.controller&&this.controller.abort(),this.controller=new AbortController;const e=this.controller.signal,r=t.resource;if(this.destinations=[],this.origins=[],this.components=[],!r||r.length==0)return;let n=this.queryForConnectivity(r,e),i=await this.pubmedQueryOnIds(t);return await Promise.all([n,i])},this.queryForConnectivity=function(t,e,r=!0){const n={sql:this.buildConnectivitySqlStatement(t)},i={method:"POST",headers:{"Content-Type":"application/json"},body:JSON.stringify(n),...e?{signal:e}:{}};return new Promise(o=>{fetch(`${this.flatmapApi}knowledge/query/`,i).then(s=>s.json()).then(s=>{if(this.connectivityExists(s)){let a=JSON.parse(s.values[0][0]);r?this.processConnectivity(a).then(u=>{o(u)}):o(a)}else 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  * MapLibre GL JS
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  * @license 3-Clause BSD. Full text of license: https://github.com/maplibre/maplibre-gl-js/blob/v4.7.0/LICENSE.txt
36
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null;if(!At(g.type,[pr,Or,Ee,Gi,fr]))return p.error(`Expected first argument to be of type boolean, string, number or null, but found ${st(g.type)} instead`);if(c.length===4){const C=p.parse(c[3],3,Ee);return C?new F(g,x,C):null}return new F(g,x)}evaluate(c){const p=this.needle.evaluate(c),g=this.haystack.evaluate(c);if(!Rt(p,["boolean","string","number","null"]))throw new Nn(`Expected first argument to be of type boolean, string, number or null, but found ${st(ln(p))} instead.`);let x;if(this.fromIndex&&(x=this.fromIndex.evaluate(c)),Rt(g,["string"])){const C=g.indexOf(p,x);return C===-1?-1:[...g.slice(0,C)].length}if(Rt(g,["array"]))return g.indexOf(p,x);throw new Nn(`Expected second argument to be of type array or string, but found ${st(ln(g))} instead.`)}eachChild(c){c(this.needle),c(this.haystack),this.fromIndex&&c(this.fromIndex)}outputDefined(){return!1}}class X{constructor(c,p,g,x,C,A){this.inputType=c,this.type=p,this.input=g,this.cases=x,this.outputs=C,this.otherwise=A}static 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p=this.input.evaluate(c),g=this.beginIndex.evaluate(c);let x;if(this.endIndex&&(x=this.endIndex.evaluate(c)),Rt(p,["string"]))return[...p].slice(g,x).join("");if(Rt(p,["array"]))return p.slice(g,x);throw new Nn(`Expected first argument to be of type array or string, but found ${st(ln(p))} instead.`)}eachChild(c){c(this.input),c(this.beginIndex),this.endIndex&&c(this.endIndex)}outputDefined(){return!1}}function yt(h,c){const p=h.length-1;let g,x,C=0,A=p,k=0;for(;C<=A;)if(k=Math.floor((C+A)/2),g=h[k],x=h[k+1],g<=c){if(k===p||c<x)return k;C=k+1}else{if(!(g>c))throw new Nn("Input is not a number.");A=k-1}return 0}class Wt{constructor(c,p,g){this.type=c,this.input=p,this.labels=[],this.outputs=[];for(const[x,C]of g)this.labels.push(x),this.outputs.push(C)}static parse(c,p){if(c.length-1<4)return p.error(`Expected at least 4 arguments, but found only ${c.length-1}.`);if((c.length-1)%2!=0)return p.error("Expected an even number of arguments.");const g=p.parse(c[1],1,Ee);if(!g)return null;const x=[];let C=null;p.expectedType&&p.expectedType.kind!=="value"&&(C=p.expectedType);for(let A=1;A<c.length;A+=2){const k=A===1?-1/0:c[A],N=c[A+1],U=A,W=A+1;if(typeof k!="number")return p.error('Input/output pairs for "step" expressions must be defined using literal numeric values (not computed expressions) for the input values.',U);if(x.length&&x[x.length-1][0]>=k)return p.error('Input/output pairs for "step" expressions must be arranged with input values in strictly ascending order.',U);const K=p.parse(N,W,C);if(!K)return null;C=C||K.type,x.push([k,K])}return new Wt(C,g,x)}evaluate(c){const p=this.labels,g=this.outputs;if(p.length===1)return g[0].evaluate(c);const x=this.input.evaluate(c);if(x<=p[0])return g[0].evaluate(c);const C=p.length;return x>=p[C-1]?g[C-1].evaluate(c):g[yt(p,x)].evaluate(c)}eachChild(c){c(this.input);for(const p of this.outputs)c(p)}outputDefined(){return this.outputs.every(c=>c.outputDefined())}}function oe(h){return h&&h.__esModule&&Object.prototype.hasOwnProperty.call(h,"default")?h.default:h}var ge=Se;function Se(h,c,p,g){this.cx=3*h,this.bx=3*(p-h)-this.cx,this.ax=1-this.cx-this.bx,this.cy=3*c,this.by=3*(g-c)-this.cy,this.ay=1-this.cy-this.by,this.p1x=h,this.p1y=c,this.p2x=p,this.p2y=g}Se.prototype={sampleCurveX:function(h){return((this.ax*h+this.bx)*h+this.cx)*h},sampleCurveY:function(h){return((this.ay*h+this.by)*h+this.cy)*h},sampleCurveDerivativeX:function(h){return(3*this.ax*h+2*this.bx)*h+this.cx},solveCurveX:function(h,c){if(c===void 0&&(c=1e-6),h<0)return 0;if(h>1)return 1;for(var p=h,g=0;g<8;g++){var x=this.sampleCurveX(p)-h;if(Math.abs(x)<c)return p;var C=this.sampleCurveDerivativeX(p);if(Math.abs(C)<1e-6)break;p-=x/C}var A=0,k=1;for(p=h,g=0;g<20&&(x=this.sampleCurveX(p),!(Math.abs(x-h)<c));g++)h>x?A=p:k=p,p=.5*(k-A)+A;return p},solve:function(h,c){return this.sampleCurveY(this.solveCurveX(h,c))}};var ve=oe(ge);function sr(h,c,p){return h+p*(c-h)}function bn(h,c,p){return h.map((g,x)=>sr(g,c[x],p))}const Tr={number:sr,color:function(h,c,p,g="rgb"){switch(g){case"rgb":{const[x,C,A,k]=bn(h.rgb,c.rgb,p);return new Ur(x,C,A,k,!1)}case"hcl":{const[x,C,A,k]=h.hcl,[N,U,W,K]=c.hcl;let et,at;if(isNaN(x)||isNaN(N))isNaN(x)?isNaN(N)?et=NaN:(et=N,A!==1&&A!==0||(at=U)):(et=x,W!==1&&W!==0||(at=C));else{let $t=N-x;N>x&&$t>180?$t-=360:N<x&&x-N>180&&($t+=360),et=x+p*$t}const[ht,Tt,Lt,Et]=function([$t,Vt,Ft,Jt]){return $t=isNaN($t)?0:$t*Le,Lr([Ft,Math.cos($t)*Vt,Math.sin($t)*Vt,Jt])}([et,at??sr(C,U,p),sr(A,W,p),sr(k,K,p)]);return new Ur(ht,Tt,Lt,Et,!1)}case"lab":{const[x,C,A,k]=Lr(bn(h.lab,c.lab,p));return new Ur(x,C,A,k,!1)}}},array:bn,padding:function(h,c,p){return new Xn(bn(h.values,c.values,p))},variableAnchorOffsetCollection:function(h,c,p){const g=h.values,x=c.values;if(g.length!==x.length)throw new Nn(`Cannot interpolate values of different length. from: ${h.toString()}, to: ${c.toString()}`);const C=[];for(let A=0;A<g.length;A+=2){if(g[A]!==x[A])throw new Nn(`Cannot interpolate values containing mismatched anchors. from[${A}]: ${g[A]}, to[${A}]: ${x[A]}`);C.push(g[A]);const[k,N]=g[A+1],[U,W]=x[A+1];C.push([sr(k,U,p),sr(N,W,p)])}return new hn(C)}};class Yr{constructor(c,p,g,x,C){this.type=c,this.operator=p,this.interpolation=g,this.input=x,this.labels=[],this.outputs=[];for(const[A,k]of C)this.labels.push(A),this.outputs.push(k)}static interpolationFactor(c,p,g,x){let C=0;if(c.name==="exponential")C=ue(p,c.base,g,x);else if(c.name==="linear")C=ue(p,1,g,x);else if(c.name==="cubic-bezier"){const A=c.controlPoints;C=new ve(A[0],A[1],A[2],A[3]).solve(ue(p,1,g,x))}return C}static parse(c,p){let[g,x,C,...A]=c;if(!Array.isArray(x)||x.length===0)return p.error("Expected an interpolation type expression.",1);if(x[0]==="linear")x={name:"linear"};else if(x[0]==="exponential"){const U=x[1];if(typeof U!="number")return p.error("Exponential interpolation requires a numeric base.",1,1);x={name:"exponential",base:U}}else{if(x[0]!=="cubic-bezier")return p.error(`Unknown interpolation type ${String(x[0])}`,1,0);{const U=x.slice(1);if(U.length!==4||U.some(W=>typeof W!="number"||W<0||W>1))return p.error("Cubic bezier interpolation requires four numeric arguments with values between 0 and 1.",1);x={name:"cubic-bezier",controlPoints:U}}}if(c.length-1<4)return p.error(`Expected at least 4 arguments, but found only ${c.length-1}.`);if((c.length-1)%2!=0)return p.error("Expected an even number of arguments.");if(C=p.parse(C,2,Ee),!C)return null;const k=[];let N=null;g==="interpolate-hcl"||g==="interpolate-lab"?N=ai:p.expectedType&&p.expectedType.kind!=="value"&&(N=p.expectedType);for(let U=0;U<A.length;U+=2){const W=A[U],K=A[U+1],et=U+3,at=U+4;if(typeof W!="number")return p.error('Input/output pairs for "interpolate" expressions must be defined using literal numeric values (not computed expressions) for the input values.',et);if(k.length&&k[k.length-1][0]>=W)return p.error('Input/output pairs for "interpolate" expressions must be arranged with 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must appear in ascending order")];Sn(Tt[0].zoom)!==C&&(C=Sn(Tt[0].zoom),x=void 0,A={}),ht=ht.concat(Di({key:`${Lt}[0]`,value:Tt[0],valueSpec:{zoom:{}},validateSpec:at.validateSpec,style:at.style,styleSpec:at.styleSpec,objectElementValidators:{zoom:L6,value:et}}))}else ht=ht.concat(et({key:`${Lt}[0]`,value:Tt[0],valueSpec:{},validateSpec:at.validateSpec,style:at.style,styleSpec:at.styleSpec},Tt));return di(xo(Tt[1]))?ht.concat([new fe(`${Lt}[1]`,Tt[1],"expressions are not allowed in function stops.")]):ht.concat(at.validateSpec({key:`${Lt}[1]`,value:Tt[1],valueSpec:c,validateSpec:at.validateSpec,style:at.style,styleSpec:at.styleSpec}))}function et(at,ht){const Tt=It(at.value),Lt=Sn(at.value),Et=at.value!==null?at.value:ht;if(g){if(Tt!==g)return[new fe(at.key,Et,`${Tt} stop domain type must match previous stop domain type ${g}`)]}else g=Tt;if(Tt!=="number"&&Tt!=="string"&&Tt!=="boolean")return[new fe(at.key,Et,"stop domain value must be a number, string, or boolean")];if(Tt!=="number"&&p!=="categorical"){let $t=`number expected, ${Tt} found`;return G1(c)&&p===void 0&&($t+='\nIf you intended to use a categorical function, specify `"type": "categorical"`.'),[new fe(at.key,Et,$t)]}return p!=="categorical"||Tt!=="number"||isFinite(Lt)&&Math.floor(Lt)===Lt?p!=="categorical"&&Tt==="number"&&x!==void 0&&Lt<x?[new fe(at.key,Et,"stop domain values must appear in ascending order")]:(x=Lt,p==="categorical"&&Lt in A?[new fe(at.key,Et,"stop domain values must be unique")]:(A[Lt]=!0,[])):[new fe(at.key,Et,`integer expected, found ${Lt}`)]}}function ca(h){const c=(h.expressionContext==="property"?w1:ho)(xo(h.value),h.valueSpec);if(c.result==="error")return c.value.map(g=>new fe(`${h.key}${g.key}`,h.value,g.message));const p=c.value.expression||c.value._styleExpression.expression;if(h.expressionContext==="property"&&h.propertyKey==="text-font"&&!p.outputDefined())return[new fe(h.key,h.value,`Invalid data expression for "${h.propertyKey}". Output values must be contained as literals within the expression.`)];if(h.expressionContext==="property"&&h.propertyType==="layout"&&!oa(p))return[new fe(h.key,h.value,'"feature-state" data expressions are not supported with layout properties.')];if(h.expressionContext==="filter"&&!oa(p))return[new fe(h.key,h.value,'"feature-state" data expressions are not supported with filters.')];if(h.expressionContext&&h.expressionContext.indexOf("cluster")===0){if(!U2(p,["zoom","feature-state"]))return[new fe(h.key,h.value,'"zoom" and "feature-state" expressions are not supported with cluster properties.')];if(h.expressionContext==="cluster-initial"&&!ia(p))return[new fe(h.key,h.value,"Feature data expressions are not supported with initial expression part of cluster properties.")]}return[]}function o1(h){const c=h.key,p=h.value,g=h.valueSpec,x=[];return Array.isArray(g.values)?g.values.indexOf(Sn(p))===-1&&x.push(new fe(c,p,`expected one of [${g.values.join(", ")}], ${JSON.stringify(p)} found`)):Object.keys(g.values).indexOf(Sn(p))===-1&&x.push(new fe(c,p,`expected one of [${Object.keys(g.values).join(", ")}], ${JSON.stringify(p)} found`)),x}function G2(h){return vs(xo(h.value))?ca(mi({},h,{expressionContext:"filter",valueSpec:{value:"boolean"}})):q3(h)}function q3(h){const c=h.value,p=h.key;if(It(c)!=="array")return[new fe(p,c,`array expected, ${It(c)} found`)];const g=h.styleSpec;let x,C=[];if(c.length<1)return[new fe(p,c,"filter array must have at least 1 element")];switch(C=C.concat(o1({key:`${p}[0]`,value:c[0],valueSpec:g.filter_operator,style:h.style,styleSpec:h.styleSpec})),Sn(c[0])){case"<":case"<=":case">":case">=":c.length>=2&&Sn(c[1])==="$type"&&C.push(new fe(p,c,`"$type" cannot be use with operator "${c[0]}"`));case"==":case"!=":c.length!==3&&C.push(new fe(p,c,`filter array for operator "${c[0]}" must have 3 elements`));case"in":case"!in":c.length>=2&&(x=It(c[1]),x!=="string"&&C.push(new fe(`${p}[1]`,c[1],`string expected, ${x} found`)));for(let A=2;A<c.length;A++)x=It(c[A]),Sn(c[1])==="$type"?C=C.concat(o1({key:`${p}[${A}]`,value:c[A],valueSpec:g.geometry_type,style:h.style,styleSpec:h.styleSpec})):x!=="string"&&x!=="number"&&x!=="boolean"&&C.push(new fe(`${p}[${A}]`,c[A],`string, number, or boolean expected, ${x} found`));break;case"any":case"all":case"none":for(let A=1;A<c.length;A++)C=C.concat(q3({key:`${p}[${A}]`,value:c[A],style:h.style,styleSpec:h.styleSpec}));break;case"has":case"!has":x=It(c[1]),c.length!==2?C.push(new fe(p,c,`filter array for "${c[0]}" operator must have 2 elements`)):x!=="string"&&C.push(new fe(`${p}[1]`,c[1],`string expected, ${x} found`))}return C}function $2(h,c){const p=h.key,g=h.validateSpec,x=h.style,C=h.styleSpec,A=h.value,k=h.objectKey,N=C[`${c}_${h.layerType}`];if(!N)return[];const U=k.match(/^(.*)-transition$/);if(c==="paint"&&U&&N[U[1]]&&N[U[1]].transition)return g({key:p,value:A,valueSpec:C.transition,style:x,styleSpec:C});const W=h.valueSpec||N[k];if(!W)return[new fe(p,A,`unknown property "${k}"`)];let K;if(It(A)==="string"&&G1(W)&&!W.tokens&&(K=/^{([^}]+)}$/.exec(A)))return[new fe(p,A,`"${k}" does not support interpolation syntax
@@ -1727,4 +1727,4 @@ DECKGL_FILTER_COLOR(fragColor, geometry);
1727
1727
  state: () => new MyClass()
1728
1728
  Found in store "${G.$id}".`),w&&o&&r.hydrate&&r.hydrate(G.$state,w),d=!0,f=!0,G}function DUt(t,e,r){let n,i;const o=typeof e=="function";n=t,i=o?r:e;function s(a,u){const d=y.hasInjectionContext();if(a=(process.env.NODE_ENV==="test"&&kh&&kh._testing?null:a)||(d?y.inject(PUt,null):null),a&&Oy(a),process.env.NODE_ENV!=="production"&&!kh)throw new Error(`[🍍]: "getActivePinia()" was called but there was no active Pinia. Are you trying to use a store before calling "app.use(pinia)"?
1729
1729
  See https://pinia.vuejs.org/core-concepts/outside-component-usage.html for help.
1730
- This will fail in production.`);a=kh,a._s.has(n)||(o?HH(n,e,i,a):DX(n,i,a),process.env.NODE_ENV!=="production"&&(s._pinia=a));const f=a._s.get(n);if(process.env.NODE_ENV!=="production"&&u){const T="__hot:"+n,Q=o?HH(T,e,i,a,!0):DX(T,Xs({},i),a,!0);u._hotUpdate(Q),delete a.state.value[T],a._s.delete(T)}if(process.env.NODE_ENV!=="production"&&EH){const T=y.getCurrentInstance();if(T&&T.proxy&&!u){const Q=T.proxy,_="_pStores"in Q?Q._pStores:Q._pStores={};_[n]=f}}return f}return s.$id=n,s}function BUt(t,e){return Array.isArray(e)?e.reduce((r,n)=>(r[n]=function(){return t(this.$pinia)[n]},r),{}):Object.keys(e).reduce((r,n)=>(r[n]=function(){const i=t(this.$pinia),o=e[n];return typeof o=="function"?o.call(this,i):i[o]},r),{})}const FUt=DUt("main",{state:()=>({userProfile:{token:""}}),getters:{userToken(t){return t.userProfile.token}},actions:{setUserToken(t){this.userProfile.token=t}}}),jUt=t=>{let e={lng:0,lat:0},r;return t.type==="Polygon"?r=t.coordinates[0]:r=t.coordinates,t.type!=="Point"?(r.map(n=>{e.lng+=parseFloat(n[0]),e.lat+=parseFloat(n[1])}),e.lng=e.lng/r.length,e.lat=e.lat/r.length):(e.lng+=parseFloat(r[0]),e.lat+=parseFloat(r[1])),e},BX=(t,e)=>{const r=[];let n=t.organs?t.organs:t.ftus;const i=n?n.filter((o,s)=>n.findIndex(a=>a.label===o.label)===s):void 0;return i&&i.forEach(o=>{const s={label:o.label,models:o.models,key:`${e}.${o.label}`},a=BX(o,s.key);a.length>0&&(s.children=a),r.push(s)}),r},zUt=function(){return{destinations:[],origins:[],components:[],destinationsWithDatasets:[],originsWithDatasets:[],componentsWithDatasets:[],resource:void 0}},UUt={name:"FlatmapVuer",components:{Button:lk,Col:qc,Loading:T2t,Radio:wk,Icon:p1,RadioGroup:xk,Row:Wc,Select:Jd,Dialog:Cat,MapSvgIcon:HC.MapSvgIcon,MapSvgSpriteColor:HC.MapSvgSpriteColor,Tooltip:u_.Tooltip,TreeControls:u_.TreeControls,SelectionsGroup:Rk,SvgLegends:Nk,ElIconWarningFilled:DA,ElIconArrowDown:C_,ElIconArrowLeft:RA,DrawToolbar:u_.DrawToolbar},beforeCreate:function(){this.setStateRequired=!1},setup(t){return{annotator:y.markRaw(new kUt(`${t.flatmapAPI}annotator`))}},methods:{initialiseDrawing:function(){this.connectionEntry={},this.activeDrawTool=void 0,this.activeDrawMode=void 0,this.drawnCreatedEvent={}},cancelDrawnFeature:function(){this.isValidDrawnCreated&&(this.closeTooltip(),this.annotationEntry={...this.drawnCreatedEvent.feature,resourceId:this.serverURL},this.rollbackAnnotationEvent(),this.initialiseDrawing())},connectedFeatureTooltip:function(t){if(this.mapImp)if(t){const e=Number(t);let r={feature:{}};if(e){const n=this.mapImp.featureProperties(e);r.feature=n}else{const n=this.existDrawnFeatures.find(i=>i.id===t.replace(" ",""));r.feature.feature=n}this.checkAndCreatePopups(r)}else this.closeTooltip()},confirmDrawnFeature:function(){this.isValidDrawnCreated&&(this.checkAndCreatePopups(this.drawnCreatedEvent),Object.keys(this.connectionEntry).length>0&&(this.annotationEntry.feature.connection=this.connectionEntry),this.initialiseDrawing())},toolbarEvent:function(t,e){if(this.closeTooltip(),this.doubleClickedFeature=!1,this.connectionEntry={},t==="mode")this.changeAnnotationDrawMode({mode:"simple_select"}),this.activeDrawMode=e,Object.keys(this.annotationEntry).length>0&&!this.featureAnnotationSubmitted&&this.rollbackAnnotationEvent();else if(t==="tool"){if(e){const r=e.replace(/[A-Z]/g,n=>`_${n.toLowerCase()}`);this.changeAnnotationDrawMode({mode:`draw${r}`}),this.initialiseDrawing()}else this.changeAnnotationDrawMode({mode:"simple_select"}),this.cancelDrawnFeature();this.activeDrawTool=e}},annotationDrawModeEvent:function(t){this.activeDrawMode==="Edit"&&this.doubleClickedFeature&&(t.feature.feature.geometry.type!=="Point"&&(this.changeAnnotationDrawMode({mode:"direct_select",options:{featureId:t.feature.feature.id}}),this.modifyAnnotationFeature()),this.doubleClickedFeature=!1),this.activeDrawMode==="Delete"&&(this.changeAnnotationDrawMode({mode:"simple_select",options:{featureIds:[t.feature.feature.id]}}),this.modifyAnnotationFeature())},createConnectivityBody:function(){if(Object.keys(this.connectionEntry).length>0){const t=Object.values(this.connectionEntry),e={type:"connectivity",source:t[0],target:t[t.length-1],intermediates:t.filter((r,n)=>n!==0&&n!==t.length-1)};this.annotationEntry.body=e}},changeAnnotationDrawMode:function(t){this.mapImp&&this.mapImp.changeAnnotationDrawMode(t)},clearAnnotationFeature:function(){this.mapImp&&this.existDrawnFeatures.length>0&&this.mapImp.clearAnnotationFeature()},modifyAnnotationFeature:function(){this.mapImp&&this.mapImp.removeAnnotationFeature()},rollbackAnnotationEvent:function(){this.mapImp&&["created","updated","deleted"].includes(this.annotationEntry.type)&&(this.mapImp.rollbackAnnotationEvent(this.annotationEntry),this.annotationEntry={})},commitAnnotationEvent:function(t){this.mapImp&&["created","updated","deleted"].includes(this.annotationEntry.type)&&t&&(this.featureAnnotationSubmitted=!0,this.mapImp.commitAnnotationEvent(this.annotationEntry),this.annotationEntry.type==="deleted"?(this.closeTooltip(),this.annotationEntry={}):this.addAnnotationFeature())},fetchAnnotatedItemIds:async function(t=void 0,e=void 0){let r=await this.annotator.annotatedItemIds(this.userToken,this.serverURL,t,e);return"resource"in r&&(r=r.itemIds),r},setFeatureAnnotated:async function(){if(this.mapImp){const t=await this.fetchAnnotatedItemIds();for(const e of t)this.mapImp.setFeatureAnnotated(e)}},fetchDrawnFeatures:async function(t,e){const r=await this.fetchAnnotatedItemIds(t,e);let n=await this.annotator.drawnFeatures(this.userToken,this.serverURL,r);return"resource"in n&&(n=n.features),this.drawnType!=="All tools"&&(n=n.filter(i=>i.geometry.type===this.drawnType)),n},addAnnotationFeature:async function(){if(this.mapImp&&(this.featureAnnotationSubmitted||this.clearAnnotationFeature(),this.drawnType!=="None")){this.featureAnnotationSubmitted||(this.loading=!0);const t=this.annotatedType==="Anyone"?void 0:this.userInformation.orcid?this.userInformation.orcid:"0000-0000-0000-0000",e=this.annotatedType==="Anyone"?void 0:this.annotatedType==="Me",r=await this.fetchDrawnFeatures(t,e);if(this.existDrawnFeatures=r,this.loading=!1,!this.featureAnnotationSubmitted)for(const n of r)this.mapImp.addAnnotationFeature(n)}},showAnnotator:function(t){this.mapImp&&(this.mapImp.showAnnotator(t),this.$el.querySelector(".maplibregl-ctrl-group").style.display="none")},setDrawnType:function(t){this.drawnType=t,this.mapImp&&(this.addAnnotationFeature(),this.initialiseDrawing())},setAnnotatedType:function(t){this.annotatedType=t,this.mapImp&&this.addAnnotationFeature()},setFlightPath3D:function(t){this.flightPath3DRadio=t,this.mapImp&&this.mapImp.enableFlightPaths(t)},viewLatestMap:function(){let t=this.biologicalSex?this.biologicalSex:void 0;this.entry==="NCBITaxon:9606"&&(t="PATO:0000384");const e={entry:this.entry,biologicalSex:t,viewport:this.mapImp.getState()};this.$emit("view-latest-map",e)},backgroundChangeCallback:function(t){this.currentBackground=t,this.mapImp&&this.mapImp.setBackgroundColour(this.currentBackground,1)},processSystems:function(t){if(this.systems.length=0,t&&t.length>0){const e={label:"All",key:"All",children:[]};t.forEach(r=>{const n={colour:r.colour,enabled:r.enabled,label:r.id,key:r.id},i=BX(r,n.key);i.length>0&&(n.children=i),e.children.push(n)}),this.systems.push(e)}},processTaxon:function(t,e){this.taxonConnectivity.length=0,e.forEach(r=>{Dk(t,r).then(n=>{const i={taxon:r,label:n};this.taxonConnectivity.push(i)})})},toggleDrawer:function(){this.drawerOpen=!this.drawerOpen},setColour:function(t){this.colourRadio=t,this.mapImp&&this.mapImp.setColour({colour:t,outline:this.outlinesRadio})},setOutlines:function(t){this.outlineRadio=t,this.mapImp&&this.mapImp.setColour({colour:this.colourRadio,outline:t})},resetView:function(){this.mapImp&&(this.mapImp.resetMap(),this.$refs.centrelinesSelection&&this.$refs.centrelinesSelection.reset(),this.$refs.skcanSelection&&this.$refs.skcanSelection.reset(),this.$refs.layersSelection&&this.$refs.layersSelection.reset(),this.$refs.systemsSelection&&this.$refs.pathwaysSelection.reset(),this.$refs.pathwaysSelection&&this.$refs.pathwaysSelection.reset())},zoomIn:function(){this.mapImp&&this.mapImp.zoomIn()},zoomOut:function(){this.mapImp&&this.mapImp.zoomOut()},centreLinesSelected:function(t){this.mapImp&&this.mapImp.enableCentrelines(t.value)},onSelectionsDataChanged:function(t){this.$emit("pathway-selection-changed",t)},sckanSelected:function(t){this.mapImp&&this.mapImp.enableSckanPath(t.key,t.value)},checkAllSCKAN:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableSckanPath(e,t.value))},highlightConnectedPaths:async function(t){var e,r;if(this.mapImp){let i=[...this.mapImp.pathModelNodes(t)].map(d=>this.mapImp.featureProperties(d)),o=await this.flatmapQueries.queryForConnectivity(t),s=(r=(e=o==null?void 0:o.ids)==null?void 0:e.dendrites)==null?void 0:r.flat().flat(),a=[],u=!1;i.forEach(d=>{this.mapImp.nodePathModels(d.featureId).forEach(f=>{u=!0,this.mapImp.pathModelNodes(f).forEach(Q=>{let _=this.mapImp.featureProperties([Q]);if(s.includes(_.models)){u=!1;return}}),u&&a.push(f)})}),this.mapImp.zoomToFeatures(a,{noZoomIn:!0})}},resetMapFilter:function(){const t=this.mapFilters.alert;let e;t.with?t.without||(e={HAS:"alert"}):t.without?e={NOT:{HAS:"alert"}}:e={AND:[{NOT:{HAS:"alert"}},{HAS:"alert"}]},e?this.mapImp.setVisibilityFilter(e):this.mapImp.clearVisibilityFilter()},alertMouseEnterEmitted:function(t){if(this.mapImp)if(t.value){let e;t.key==="alert"?e={HAS:"alert"}:t.key==="withoutAlert"&&(e={NOT:{HAS:"alert"}}),this.mapImp.setVisibilityFilter(e)}else this.resetMapFilter()},alertSelected:function(t){this.mapImp&&(t.key==="alert"?t.value?this.mapFilters.alert.with=!0:this.mapFilters.alert.with=!1:t.key==="withoutAlert"&&(t.value?this.mapFilters.alert.without=!0:this.mapFilters.alert.without=!1),this.resetMapFilter())},checkAllAlerts:function(t){this.mapImp&&(t.value?(this.mapFilters.alert.without=!0,this.mapFilters.alert.with=!0):(this.mapFilters.alert.without=!1,this.mapFilters.alert.with=!1),this.resetMapFilter())},systemSelected:function(t){this.mapImp&&this.mapImp.enableSystem(t.key,t.value)},checkAllSystems:function(t){this.mapImp&&this.systems[0].children.forEach(e=>this.mapImp.enableSystem(e.label,t))},ftuSelected:function(t){this.searchAndShowResult(t,!0)},layersSelected:function(t){this.mapImp&&this.mapImp.enableLayer(t.key,t.value)},checkAllLayers:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableLayer(e,t.value))},taxonsSelected:function(t){this.mapImp&&this.mapImp.enableConnectivityByTaxonIds(t.key,t.value)},taxonMouseEnterEmitted:function(t){if(this.mapImp)if(t.value){let e=this.mapImp.taxonFeatureIds(t.key);this.mapImp.enableConnectivityByTaxonIds(t.key,t.value),this.mapImp.zoomToGeoJSONFeatures(e,{noZoomIn:!0})}else this.mapImp.unselectGeoJSONFeatures(),t.selections.forEach(e=>{let r=t.checked.includes(e.taxon);this.mapImp.enableConnectivityByTaxonIds(e.taxon,r)})},checkAllTaxons:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableConnectivityByTaxonIds(e,t.value))},pathwaysSelected:function(t){this.mapImp&&this.mapImp.enablePath(t.key,t.value)},checkAllPathways:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enablePath(e,t.value))},enablePanZoomEvents:function(t){this.mapImp.enablePanZoomEvents(t)},annotationEventCallback:function(t,e){if(e.type==="aborted")this.featureAnnotationSubmitted?this.featureAnnotationSubmitted=!1:this.rollbackAnnotationEvent();else if(e.type==="modeChanged")e.feature.mode==="direct_select"&&(this.doubleClickedFeature=!0);else if(e.type==="selectionChanged"){if(this.selectedDrawnFeature=e.feature.features.length===0?void 0:e.feature.features[0],t.feature.feature=this.selectedDrawnFeature,!this.activeDrawTool&&(this.connectionEntry={},this.selectedDrawnFeature)){const r=this.existDrawnFeatures.find(n=>n.id===this.selectedDrawnFeature.id);r&&r.connection&&(this.connectionEntry=r.connection),this.annotationDrawModeEvent(t)}}else{if(e.type==="created"||e.type==="updated"){e.type==="updated"&&e.feature.action&&(e.positionUpdated=e.feature.action==="move");const r=this.mapImp.refreshAnnotationFeatureGeometry(e.feature);t.feature.feature=r}e.type==="created"?this.drawnCreatedEvent=t:this.checkAndCreatePopups(t)}},eventCallback:function(){return(t,e,...r)=>{if(t==="annotation"){const n={feature:e,userData:r,eventType:t};this.annotationEventCallback(n,e)}else if(t!=="pan-zoom"){const n=e.label,i=[e.models],o=this.entry,s=this.biologicalSex;let a;e.taxons&&(typeof e.taxons!="object"?a=JSON.parse(e.taxons):a=e.taxons);const u={dataset:e.dataset,biologicalSex:s,taxonomy:o,resource:i,label:n,feature:e,userData:r,eventType:t,provenanceTaxonomy:a};if(t==="click"){if(this.featuresAlert=e.alert,this.viewingMode==="Neuron Connection")this.highlightConnectedPaths([e.models]);else if(this.currentActive=e.models?e.models:"",this.activeDrawTool&&!this.isValidDrawnCreated){const d=e.featureId||this.existDrawnFeatures.find(f=>f.id===e.id);if(this.activeDrawTool==="LineString"&&d){const f=e.featureId?e.featureId:e.id,T=e.label?e.label:`Feature ${e.id}`;this.connectionEntry[` ${f}`]=Object.assign({label:T},Object.fromEntries(Object.entries(e).filter(([Q])=>["featureId","models"].includes(Q)).map(([Q,_])=>[Q==="featureId"?"id":Q,_])))}}}else t==="mouseenter"&&this.viewingMode!=="Neuron Connection"&&(this.currentHover=e.models?e.models:"");e&&e.type!=="marker"&&t==="click"&&this.viewingMode!=="Neuron Connection"&&!this.activeDrawTool&&this.checkAndCreatePopups(u),this.$emit("resource-selected",u)}else this.$emit("pan-zoom-callback",e)}},changeViewingMode:function(t){t&&(this.viewingMode=t),this.closeTooltip()},checkAndCreatePopups:async function(t){if(this.viewingMode==="Annotation")t.feature?(this.annotationEntry={...t.feature,resourceId:this.serverURL},t.feature.featureId&&t.feature.models?this.displayTooltip(t.feature.models):t.feature.feature&&(this.activeDrawTool||this.activeDrawMode||Object.keys(this.connectionEntry).length>0?(this.featureAnnotationSubmitted=!1,this.annotationEntry.featureId=t.feature.feature.id,this.activeDrawTool&&this.createConnectivityBody(),this.displayTooltip(t.feature.feature.id,jUt(t.feature.feature.geometry))):this.rollbackAnnotationEvent())):this.annotation={};else{let e=await this.flatmapQueries.retrieveFlatmapKnowledgeForEvent(t);(e[0]||e[1]||t.feature.hyperlinks&&t.feature.hyperlinks.length>0)&&(this.resourceForTooltip=t.resource[0],t.resourceForTooltip=this.resourceForTooltip,this.createTooltipFromNeuronCuration(t))}},popUpCssHacks:function(){const t=document.querySelector(".flatmap-tooltip-popup"),e=document.querySelector(".maplibregl-popup-close-button");t&&(t.style.display="none"),e.style.display="block",this.$refs.tooltip.$el.style.display="flex",e.onclick=()=>{this.$emit("connectivity-info-close"),t&&(t.style.display="block")}},closeTooltip:function(){this.$refs.tooltip.$el.style.display="none",document.querySelectorAll(".maplibregl-popup").forEach(t=>{t.style.display="none"})},createTooltipFromNeuronCuration:async function(t){this.tooltipEntry=await this.flatmapQueries.createTooltipData(t),this.displayTooltip(t.resource[0])},showPopup:function(t,e,r){let n=r;this.mapImp&&(n?n.className||(n.className="custom-popup"):n={className:"custom-popup",positionAtLastClick:!0},this.mapImp.showPopup(t,e,n))},showMarkerPopup:function(t,e,r){this.mapImp&&this.mapImp.showMarkerPopup(t,e,r)},closeMinimap:function(){let t=this.$refs.flatmapContainer.querySelector(".maplibregl-ctrl-minimap");this.minimapSmall?(t.classList.add("enlarge"),t.classList.remove("shrink")):(t.classList.add("shrink"),t.classList.remove("enlarge")),this.minimapSmall=!this.minimapSmall},addResizeButtonToMinimap:function(){let t=this.$refs.flatmapContainer.querySelector(".maplibregl-ctrl-minimap");t&&(this.$refs.minimapResize&&this.$refs.minimapResize.$el.parentNode&&this.$refs.minimapResize.$el.parentNode.removeChild(this.$refs.minimapResize.$el),t.appendChild(this.$refs.minimapResize.$el),this.minimapResizeShow=!0)},setHelpMode:function(t){const e=this.hoverVisibilities.length,r=e-1,n=this.hoverVisibilities[this.helpModeActiveIndex];if(n){const i=n==null?void 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n=r-1;n>=0&&this.$nextTick(()=>{this.setSpecies(t,e,n)})}},viewLatestMap:function(t){const e=Object.keys(this.speciesList);for(let r=0;r<e.length;r++){const n=this.speciesList[e[r]];if(!n.isLegacy&&n.taxo===t.entry&&n.biologicalSex===t.biologicalSex){this.setSpecies(e[r],t,0);return}}},createLegacyEntry:function(t,e,r){if(r&&e){let n="Legacy";return t.species&&(t.species.slice(0,6)==="Legacy"?n=t.species:n=n+` ${t.species}`),this.speciesList[n]={taxo:e,isLegacy:!0,displayWarning:!0},{species:n,state:{entry:e,uuid:r,viewport:t.state.viewport,searchTerm:t.state.searchTerm}}}},updateState:function(t){return new Promise(e=>{if(t&&t.state){const r=t.state;if(r.uuid){if(r.entry)return new Promise(()=>{const n=new bH(this.flatmapAPI),i={taxon:r.entry};r.biologicalSex&&(i.biologicalSex=r.biologicalSex),n.findMap_(i).then(o=>{if(o.uuid!==r.uuid)return this.createLegacyEntry(t,r.entry,r.uuid)}).then(o=>{e(o||t)}).catch(()=>{e(t)})})}else if(r.entry){const n=r.entry in jX?jX[r.entry]:void 0,i=this.createLegacyEntry(t,r.entry,n);e(i||t)}}e(t)})},getState:function(){let t={species:this.activeSpecies,state:void 0},e=this.getCurrentFlatmap();return t.state=e.getState(),t},setState:function(t){t&&this.updateState(t).then(e=>{this.initialise().then(()=>{e.species&&e.species!==this.activeSpecies?this.setSpecies(e.species,e.state,5):e.state&&this.getCurrentFlatmap().setState(e.state)})})},activateTooltipByIndex:function(t){return t===this.helpModeActiveItem&&this.helpMode},onHelpModeLastItem:function(t){t&&this.$emit("help-mode-last-item",!0)},onTooltipShown:function(){this.$emit("shown-tooltip")},onMapTooltipShown:function(){this.$emit("shown-map-tooltip")},changeViewingMode:function(t){this.getCurrentFlatmap().changeViewingMode(t)}},props:{initial:{type:String,default:""},minZoom:{type:Number,default:4},renderAtMounted:{type:Boolean,default:!1},helpMode:{type:Boolean,default:!1},helpModeActiveItem:{type:Number,default:0},helpModeDialog:{type:Boolean,default:!1},helpModeLastItem:{type:Boolean,default:!1},displayMinimap:{type:Boolean,default:!1},showStarInLegend:{type:Boolean,default:!1},enableOpenMapUI:{type:Boolean,default:!1},openMapOptions:{type:Array},availableSpecies:{type:Object,default:function(){return{"Human Female":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000383",iconClass:"mapicon-icon_human",displayWarning:!0},"Human Male":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000384",iconClass:"mapicon-icon_human",displayWarning:!0},Rat:{taxo:"NCBITaxon:10114",iconClass:"mapicon-icon_rat",displayLatestChanges:!0},Mouse:{taxo:"NCBITaxon:10090",iconClass:"mapicon-icon_mouse",displayWarning:!0},Pig:{taxo:"NCBITaxon:9823",iconClass:"mapicon-icon_pig",displayWarning:!0},Cat:{taxo:"NCBITaxon:9685",iconClass:"mapicon-icon_cat",displayWarning:!0}}}},state:{type:Object,default:void 0},flatmapAPI:{type:String,default:"https://mapcore-demo.org/current/flatmap/v3/"},sparcAPI:{type:String,default:"https://api.sparc.science/"},disableUI:{type:Boolean,default:!1},connectivityInfoSidebar:{type:Boolean,default:!1}},data:function(){return{activeSpecies:void 0,speciesList:{},requireInitialisation:!0,resolveList:y.markRaw([]),initialised:!1}},watch:{state:{handler:function(t){this.setState(t)},immediate:!0,deep:!0}}},mGt=t=>(y.pushScopeId("data-v-5364de02"),t=t(),y.popScopeId(),t),gGt={class:"multi-container",ref:"multiContainer"},yGt={key:0,style:{position:"absolute","z-index":"10"}},_Gt=mGt(()=>y.createElementVNode("div",{class:"species-display-text"},"Species",-1)),vGt={class:"select-box-icon"};function bGt(t,e,r,n,i,o){const s=pv,a=Jd,u=tp,d=CH;return y.openBlock(),y.createElementBlock("div",gGt,[r.disableUI?y.createCommentVNode("",!0):(y.openBlock(),y.createElementBlock("div",yGt,[_Gt,y.createVNode(u,{content:"Select a species",placement:"right",trigger:"manual","popper-class":"flatmap-popper flatmap-teleport-popper right-popper",width:"max-content",visible:o.activateTooltipByIndex(0),teleported:!1,ref:"selectPopover"},{reference:y.withCtx(()=>[y.createVNode(a,{id:"flatmap-select",teleported:!1,modelValue:t.activeSpecies,"onUpdate:modelValue":e[0]||(e[0]=f=>t.activeSpecies=f),placeholder:"Select",class:"select-box","popper-class":"flatmap-dropdown",onChange:o.setSpecies},{default:y.withCtx(()=>[(y.openBlock(!0),y.createElementBlock(y.Fragment,null,y.renderList(t.speciesList,(f,T)=>(y.openBlock(),y.createBlock(s,{key:T,label:T,value:T},{default:y.withCtx(()=>[y.createElementVNode("span",vGt,[y.createElementVNode("i",{class:y.normalizeClass(f.iconClass)},null,2)]),y.createTextVNode(" "+y.toDisplayString(T),1)]),_:2},1032,["label","value"]))),128))]),_:1},8,["modelValue","onChange"])]),_:1},8,["visible"])])),(y.openBlock(!0),y.createElementBlock(y.Fragment,null,y.renderList(t.speciesList,(f,T)=>y.withDirectives((y.openBlock(),y.createBlock(d,{key:T,entry:f.taxo,uuid:f.uuid,biologicalSex:f.biologicalSex,displayWarning:f.displayWarning,displayLatestChanges:f.displayLatestChanges,isLegacy:f.isLegacy,ref_for:!0,ref:T,enableOpenMapUI:r.enableOpenMapUI,openMapOptions:r.openMapOptions,disableUI:r.disableUI,onViewLatestMap:o.viewLatestMap,onResourceSelected:o.resourceSelected,onReady:o.FlatmapReady,onPanZoomCallback:o.panZoomCallback,connectivityInfoSidebar:r.connectivityInfoSidebar,onConnectivityInfoOpen:o.onConnectivityInfoOpen,onConnectivityInfoClose:o.onConnectivityInfoClose,onOpenMap:e[1]||(e[1]=Q=>t.$emit("open-map",Q)),onPathwaySelectionChanged:o.onSelectionsDataChanged,minZoom:r.minZoom,helpMode:t.activeSpecies==T&&r.helpMode,helpModeActiveItem:r.helpModeActiveItem,helpModeDialog:r.helpModeDialog,helpModeInitialIndex:-2,onHelpModeLastItem:o.onHelpModeLastItem,onShownTooltip:o.onTooltipShown,onShownMapTooltip:o.onMapTooltipShown,renderAtMounted:r.renderAtMounted,displayMinimap:r.displayMinimap,showStarInLegend:r.showStarInLegend,style:{height:"100%"},flatmapAPI:r.flatmapAPI,sparcAPI:r.sparcAPI},null,8,["entry","uuid","biologicalSex","displayWarning","displayLatestChanges","isLegacy","enableOpenMapUI","openMapOptions","disableUI","onViewLatestMap","onResourceSelected","onReady","onPanZoomCallback","connectivityInfoSidebar","onConnectivityInfoOpen","onConnectivityInfoClose","onPathwaySelectionChanged","minZoom","helpMode","helpModeActiveItem","helpModeDialog","onHelpModeLastItem","onShownTooltip","onShownMapTooltip","renderAtMounted","displayMinimap","showStarInLegend","flatmapAPI","sparcAPI"])),[[y.vShow,t.activeSpecies==T]])),128))],512)}const LGt=np(QGt,[["render",bGt],["__scopeId","data-v-5364de02"]]);To.FlatmapVuer=CH,To.MultiFlatmapVuer=LGt,Object.defineProperty(To,Symbol.toStringTag,{value:"Module"})});
1730
+ This will fail in production.`);a=kh,a._s.has(n)||(o?HH(n,e,i,a):DX(n,i,a),process.env.NODE_ENV!=="production"&&(s._pinia=a));const f=a._s.get(n);if(process.env.NODE_ENV!=="production"&&u){const T="__hot:"+n,Q=o?HH(T,e,i,a,!0):DX(T,Xs({},i),a,!0);u._hotUpdate(Q),delete a.state.value[T],a._s.delete(T)}if(process.env.NODE_ENV!=="production"&&EH){const T=y.getCurrentInstance();if(T&&T.proxy&&!u){const Q=T.proxy,_="_pStores"in Q?Q._pStores:Q._pStores={};_[n]=f}}return f}return s.$id=n,s}function BUt(t,e){return Array.isArray(e)?e.reduce((r,n)=>(r[n]=function(){return t(this.$pinia)[n]},r),{}):Object.keys(e).reduce((r,n)=>(r[n]=function(){const i=t(this.$pinia),o=e[n];return typeof o=="function"?o.call(this,i):i[o]},r),{})}const FUt=DUt("main",{state:()=>({userProfile:{token:""}}),getters:{userToken(t){return t.userProfile.token}},actions:{setUserToken(t){this.userProfile.token=t}}}),jUt=t=>{let e={lng:0,lat:0},r;return t.type==="Polygon"?r=t.coordinates[0]:r=t.coordinates,t.type!=="Point"?(r.map(n=>{e.lng+=parseFloat(n[0]),e.lat+=parseFloat(n[1])}),e.lng=e.lng/r.length,e.lat=e.lat/r.length):(e.lng+=parseFloat(r[0]),e.lat+=parseFloat(r[1])),e},BX=(t,e)=>{const r=[];let n=t.organs?t.organs:t.ftus;const i=n?n.filter((o,s)=>n.findIndex(a=>a.label===o.label)===s):void 0;return i&&i.forEach(o=>{const s={label:o.label,models:o.models,key:`${e}.${o.label}`},a=BX(o,s.key);a.length>0&&(s.children=a),r.push(s)}),r},zUt=function(){return{destinations:[],origins:[],components:[],destinationsWithDatasets:[],originsWithDatasets:[],componentsWithDatasets:[],resource:void 0}},UUt={name:"FlatmapVuer",components:{Button:lk,Col:qc,Loading:T2t,Radio:wk,Icon:p1,RadioGroup:xk,Row:Wc,Select:Jd,Dialog:Cat,MapSvgIcon:HC.MapSvgIcon,MapSvgSpriteColor:HC.MapSvgSpriteColor,Tooltip:u_.Tooltip,TreeControls:u_.TreeControls,SelectionsGroup:Rk,SvgLegends:Nk,ElIconWarningFilled:DA,ElIconArrowDown:C_,ElIconArrowLeft:RA,DrawToolbar:u_.DrawToolbar},beforeCreate:function(){this.setStateRequired=!1},setup(t){return{annotator:y.markRaw(new kUt(`${t.flatmapAPI}annotator`))}},methods:{initialiseDrawing:function(){this.connectionEntry={},this.activeDrawTool=void 0,this.activeDrawMode=void 0,this.drawnCreatedEvent={}},cancelDrawnFeature:function(){this.isValidDrawnCreated&&(this.closeTooltip(),this.annotationEntry={...this.drawnCreatedEvent.feature,resourceId:this.serverURL},this.rollbackAnnotationEvent(),this.initialiseDrawing())},connectedFeatureTooltip:function(t){if(this.mapImp)if(t){const e=Number(t);let r={feature:{}};if(e){const n=this.mapImp.featureProperties(e);r.feature=n}else{const n=this.existDrawnFeatures.find(i=>i.id===t.replace(" ",""));r.feature.feature=n}this.checkAndCreatePopups(r)}else this.closeTooltip()},confirmDrawnFeature:function(){this.isValidDrawnCreated&&(this.checkAndCreatePopups(this.drawnCreatedEvent),Object.keys(this.connectionEntry).length>0&&(this.annotationEntry.feature.connection=this.connectionEntry),this.initialiseDrawing())},toolbarEvent:function(t,e){if(this.closeTooltip(),this.doubleClickedFeature=!1,this.connectionEntry={},t==="mode")this.changeAnnotationDrawMode({mode:"simple_select"}),this.activeDrawMode=e,Object.keys(this.annotationEntry).length>0&&!this.featureAnnotationSubmitted&&this.rollbackAnnotationEvent();else if(t==="tool"){if(e){const r=e.replace(/[A-Z]/g,n=>`_${n.toLowerCase()}`);this.changeAnnotationDrawMode({mode:`draw${r}`}),this.initialiseDrawing()}else this.changeAnnotationDrawMode({mode:"simple_select"}),this.cancelDrawnFeature();this.activeDrawTool=e}},annotationDrawModeEvent:function(t){this.activeDrawMode==="Edit"&&this.doubleClickedFeature&&(t.feature.feature.geometry.type!=="Point"&&(this.changeAnnotationDrawMode({mode:"direct_select",options:{featureId:t.feature.feature.id}}),this.modifyAnnotationFeature()),this.doubleClickedFeature=!1),this.activeDrawMode==="Delete"&&(this.changeAnnotationDrawMode({mode:"simple_select",options:{featureIds:[t.feature.feature.id]}}),this.modifyAnnotationFeature())},createConnectivityBody:function(){if(Object.keys(this.connectionEntry).length>0){const t=Object.values(this.connectionEntry),e={type:"connectivity",source:t[0],target:t[t.length-1],intermediates:t.filter((r,n)=>n!==0&&n!==t.length-1)};this.annotationEntry.body=e}},changeAnnotationDrawMode:function(t){this.mapImp&&this.mapImp.changeAnnotationDrawMode(t)},clearAnnotationFeature:function(){this.mapImp&&this.existDrawnFeatures.length>0&&this.mapImp.clearAnnotationFeature()},modifyAnnotationFeature:function(){this.mapImp&&this.mapImp.removeAnnotationFeature()},rollbackAnnotationEvent:function(){this.mapImp&&["created","updated","deleted"].includes(this.annotationEntry.type)&&(this.mapImp.rollbackAnnotationEvent(this.annotationEntry),this.annotationEntry={})},commitAnnotationEvent:function(t){this.mapImp&&["created","updated","deleted"].includes(this.annotationEntry.type)&&t&&(this.featureAnnotationSubmitted=!0,this.mapImp.commitAnnotationEvent(this.annotationEntry),this.annotationEntry.type==="deleted"?(this.closeTooltip(),this.annotationEntry={}):this.addAnnotationFeature())},fetchAnnotatedItemIds:async function(t=void 0,e=void 0){let r=await this.annotator.annotatedItemIds(this.userToken,this.serverURL,t,e);return"resource"in r&&(r=r.itemIds),r},setFeatureAnnotated:async function(){if(this.mapImp){const t=await this.fetchAnnotatedItemIds();for(const e of t)this.mapImp.setFeatureAnnotated(e)}},fetchDrawnFeatures:async function(t,e){const r=await this.fetchAnnotatedItemIds(t,e);let n=await this.annotator.drawnFeatures(this.userToken,this.serverURL,r);return"resource"in n&&(n=n.features),this.drawnType!=="All tools"&&(n=n.filter(i=>i.geometry.type===this.drawnType)),n},addAnnotationFeature:async function(){if(this.mapImp&&(this.featureAnnotationSubmitted||this.clearAnnotationFeature(),this.drawnType!=="None")){this.featureAnnotationSubmitted||(this.loading=!0);const t=this.annotatedType==="Anyone"?void 0:this.userInformation.orcid?this.userInformation.orcid:"0000-0000-0000-0000",e=this.annotatedType==="Anyone"?void 0:this.annotatedType==="Me",r=await this.fetchDrawnFeatures(t,e);if(this.existDrawnFeatures=r,this.loading=!1,!this.featureAnnotationSubmitted)for(const n of r)this.mapImp.addAnnotationFeature(n)}},showAnnotator:function(t){this.mapImp&&(this.mapImp.showAnnotator(t),this.$el.querySelector(".maplibregl-ctrl-group").style.display="none")},setDrawnType:function(t){this.drawnType=t,this.mapImp&&(this.addAnnotationFeature(),this.initialiseDrawing())},setAnnotatedType:function(t){this.annotatedType=t,this.mapImp&&this.addAnnotationFeature()},setFlightPath3D:function(t){this.flightPath3DRadio=t,this.mapImp&&this.mapImp.enableFlightPaths(t)},viewLatestMap:function(){let t=this.biologicalSex?this.biologicalSex:void 0;this.entry==="NCBITaxon:9606"&&(t="PATO:0000384");const e={entry:this.entry,biologicalSex:t,viewport:this.mapImp.getState()};this.$emit("view-latest-map",e)},backgroundChangeCallback:function(t){this.currentBackground=t,this.mapImp&&this.mapImp.setBackgroundColour(this.currentBackground,1)},processSystems:function(t){if(this.systems.length=0,t&&t.length>0){const e={label:"All",key:"All",children:[]};t.forEach(r=>{const n={colour:r.colour,enabled:r.enabled,label:r.id,key:r.id},i=BX(r,n.key);i.length>0&&(n.children=i),e.children.push(n)}),this.systems.push(e)}},processTaxon:function(t,e){this.taxonConnectivity.length=0,e.forEach(r=>{Dk(t,r).then(n=>{const i={taxon:r,label:n};this.taxonConnectivity.push(i)})})},toggleDrawer:function(){this.drawerOpen=!this.drawerOpen},setColour:function(t){this.colourRadio=t,this.mapImp&&this.mapImp.setColour({colour:t,outline:this.outlinesRadio})},setOutlines:function(t){this.outlineRadio=t,this.mapImp&&this.mapImp.setColour({colour:this.colourRadio,outline:t})},resetView:function(){this.mapImp&&(this.mapImp.resetMap(),this.$refs.centrelinesSelection&&this.$refs.centrelinesSelection.reset(),this.$refs.skcanSelection&&this.$refs.skcanSelection.reset(),this.$refs.layersSelection&&this.$refs.layersSelection.reset(),this.$refs.systemsSelection&&this.$refs.pathwaysSelection.reset(),this.$refs.pathwaysSelection&&this.$refs.pathwaysSelection.reset())},zoomIn:function(){this.mapImp&&this.mapImp.zoomIn()},zoomOut:function(){this.mapImp&&this.mapImp.zoomOut()},centreLinesSelected:function(t){this.mapImp&&this.mapImp.enableCentrelines(t.value)},onSelectionsDataChanged:function(t){this.$emit("pathway-selection-changed",t)},sckanSelected:function(t){this.mapImp&&this.mapImp.enableSckanPath(t.key,t.value)},checkAllSCKAN:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableSckanPath(e,t.value))},highlightConnectedPaths:async function(t){var e,r;if(this.mapImp){let i=[...this.mapImp.pathModelNodes(t)].map(d=>this.mapImp.featureProperties(d)),o=await this.flatmapQueries.queryForConnectivity(t),s=(r=(e=o==null?void 0:o.ids)==null?void 0:e.dendrites)==null?void 0:r.flat().flat(),a=[],u=!1;i.forEach(d=>{this.mapImp.nodePathModels(d.featureId).forEach(f=>{u=!0,this.mapImp.pathModelNodes(f).forEach(Q=>{let _=this.mapImp.featureProperties([Q]);if(s.includes(_.models)){u=!1;return}}),u&&a.push(f)})}),this.mapImp.zoomToFeatures(a,{noZoomIn:!0})}},resetMapFilter:function(){const t=this.mapFilters.alert;let e;t.with?t.without||(e={HAS:"alert"}):t.without?e={NOT:{HAS:"alert"}}:e={AND:[{NOT:{HAS:"alert"}},{HAS:"alert"}]},e?this.mapImp.setVisibilityFilter(e):this.mapImp.clearVisibilityFilter()},alertMouseEnterEmitted:function(t){if(this.mapImp)if(t.value){let e;t.key==="alert"?e={HAS:"alert"}:t.key==="withoutAlert"&&(e={NOT:{HAS:"alert"}}),this.mapImp.setVisibilityFilter(e)}else this.resetMapFilter()},alertSelected:function(t){this.mapImp&&(t.key==="alert"?t.value?this.mapFilters.alert.with=!0:this.mapFilters.alert.with=!1:t.key==="withoutAlert"&&(t.value?this.mapFilters.alert.without=!0:this.mapFilters.alert.without=!1),this.resetMapFilter())},checkAllAlerts:function(t){this.mapImp&&(t.value?(this.mapFilters.alert.without=!0,this.mapFilters.alert.with=!0):(this.mapFilters.alert.without=!1,this.mapFilters.alert.with=!1),this.resetMapFilter())},systemSelected:function(t){this.mapImp&&this.mapImp.enableSystem(t.key,t.value)},checkAllSystems:function(t){this.mapImp&&this.systems[0].children.forEach(e=>this.mapImp.enableSystem(e.label,t))},ftuSelected:function(t){this.searchAndShowResult(t,!0)},layersSelected:function(t){this.mapImp&&this.mapImp.enableLayer(t.key,t.value)},checkAllLayers:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableLayer(e,t.value))},taxonsSelected:function(t){this.mapImp&&this.mapImp.enableConnectivityByTaxonIds(t.key,t.value)},taxonMouseEnterEmitted:function(t){if(this.mapImp)if(t.value){let e=this.mapImp.taxonFeatureIds(t.key);this.mapImp.enableConnectivityByTaxonIds(t.key,t.value),this.mapImp.zoomToGeoJSONFeatures(e,{noZoomIn:!0})}else this.mapImp.unselectGeoJSONFeatures(),t.selections.forEach(e=>{let r=t.checked.includes(e.taxon);this.mapImp.enableConnectivityByTaxonIds(e.taxon,r)})},checkAllTaxons:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enableConnectivityByTaxonIds(e,t.value))},pathwaysSelected:function(t){this.mapImp&&this.mapImp.enablePath(t.key,t.value)},checkAllPathways:function(t){this.mapImp&&t.keys.forEach(e=>this.mapImp.enablePath(e,t.value))},enablePanZoomEvents:function(t){this.mapImp.enablePanZoomEvents(t)},annotationEventCallback:function(t,e){if(e.type==="aborted")this.featureAnnotationSubmitted?this.featureAnnotationSubmitted=!1:this.rollbackAnnotationEvent();else if(e.type==="modeChanged")e.feature.mode==="direct_select"&&(this.doubleClickedFeature=!0);else 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n=r-1;n>=0&&this.$nextTick(()=>{this.setSpecies(t,e,n)})}},viewLatestMap:function(t){const e=Object.keys(this.speciesList);for(let r=0;r<e.length;r++){const n=this.speciesList[e[r]];if(!n.isLegacy&&n.taxo===t.entry&&n.biologicalSex===t.biologicalSex){this.setSpecies(e[r],t,0);return}}},createLegacyEntry:function(t,e,r){if(r&&e){let n="Legacy";return t.species&&(t.species.slice(0,6)==="Legacy"?n=t.species:n=n+` ${t.species}`),this.speciesList[n]={taxo:e,isLegacy:!0,displayWarning:!0},{species:n,state:{entry:e,uuid:r,viewport:t.state.viewport,searchTerm:t.state.searchTerm}}}},updateState:function(t){return new Promise(e=>{if(t&&t.state){const r=t.state;if(r.uuid){if(r.entry)return new Promise(()=>{const n=new bH(this.flatmapAPI),i={taxon:r.entry};r.biologicalSex&&(i.biologicalSex=r.biologicalSex),n.findMap_(i).then(o=>{if(o.uuid!==r.uuid)return this.createLegacyEntry(t,r.entry,r.uuid)}).then(o=>{e(o||t)}).catch(()=>{e(t)})})}else if(r.entry){const n=r.entry in jX?jX[r.entry]:void 0,i=this.createLegacyEntry(t,r.entry,n);e(i||t)}}e(t)})},getState:function(){let t={species:this.activeSpecies,state:void 0},e=this.getCurrentFlatmap();return t.state=e.getState(),t},setState:function(t){t&&this.updateState(t).then(e=>{this.initialise().then(()=>{e.species&&e.species!==this.activeSpecies?this.setSpecies(e.species,e.state,5):e.state&&this.getCurrentFlatmap().setState(e.state)})})},activateTooltipByIndex:function(t){return t===this.helpModeActiveItem&&this.helpMode},onHelpModeLastItem:function(t){t&&this.$emit("help-mode-last-item",!0)},onTooltipShown:function(){this.$emit("shown-tooltip")},onMapTooltipShown:function(){this.$emit("shown-map-tooltip")},changeViewingMode:function(t){this.getCurrentFlatmap().changeViewingMode(t)}},props:{initial:{type:String,default:""},minZoom:{type:Number,default:4},renderAtMounted:{type:Boolean,default:!1},helpMode:{type:Boolean,default:!1},helpModeActiveItem:{type:Number,default:0},helpModeDialog:{type:Boolean,default:!1},helpModeLastItem:{type:Boolean,default:!1},displayMinimap:{type:Boolean,default:!1},showStarInLegend:{type:Boolean,default:!1},enableOpenMapUI:{type:Boolean,default:!1},openMapOptions:{type:Array},availableSpecies:{type:Object,default:function(){return{"Human Female":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000383",iconClass:"mapicon-icon_human",displayWarning:!0},"Human Male":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000384",iconClass:"mapicon-icon_human",displayWarning:!0},Rat:{taxo:"NCBITaxon:10114",iconClass:"mapicon-icon_rat",displayLatestChanges:!0},Mouse:{taxo:"NCBITaxon:10090",iconClass:"mapicon-icon_mouse",displayWarning:!0},Pig:{taxo:"NCBITaxon:9823",iconClass:"mapicon-icon_pig",displayWarning:!0},Cat:{taxo:"NCBITaxon:9685",iconClass:"mapicon-icon_cat",displayWarning:!0}}}},state:{type:Object,default:void 0},flatmapAPI:{type:String,default:"https://mapcore-demo.org/current/flatmap/v3/"},sparcAPI:{type:String,default:"https://api.sparc.science/"},disableUI:{type:Boolean,default:!1},connectivityInfoSidebar:{type:Boolean,default:!1}},data:function(){return{activeSpecies:void 0,speciesList:{},requireInitialisation:!0,resolveList:y.markRaw([]),initialised:!1}},watch:{state:{handler:function(t){this.setState(t)},immediate:!0,deep:!0}}},mGt=t=>(y.pushScopeId("data-v-5364de02"),t=t(),y.popScopeId(),t),gGt={class:"multi-container",ref:"multiContainer"},yGt={key:0,style:{position:"absolute","z-index":"10"}},_Gt=mGt(()=>y.createElementVNode("div",{class:"species-display-text"},"Species",-1)),vGt={class:"select-box-icon"};function bGt(t,e,r,n,i,o){const s=pv,a=Jd,u=tp,d=CH;return y.openBlock(),y.createElementBlock("div",gGt,[r.disableUI?y.createCommentVNode("",!0):(y.openBlock(),y.createElementBlock("div",yGt,[_Gt,y.createVNode(u,{content:"Select a species",placement:"right",trigger:"manual","popper-class":"flatmap-popper flatmap-teleport-popper right-popper",width:"max-content",visible:o.activateTooltipByIndex(0),teleported:!1,ref:"selectPopover"},{reference:y.withCtx(()=>[y.createVNode(a,{id:"flatmap-select",teleported:!1,modelValue:t.activeSpecies,"onUpdate:modelValue":e[0]||(e[0]=f=>t.activeSpecies=f),placeholder:"Select",class:"select-box","popper-class":"flatmap-dropdown",onChange:o.setSpecies},{default:y.withCtx(()=>[(y.openBlock(!0),y.createElementBlock(y.Fragment,null,y.renderList(t.speciesList,(f,T)=>(y.openBlock(),y.createBlock(s,{key:T,label:T,value:T},{default:y.withCtx(()=>[y.createElementVNode("span",vGt,[y.createElementVNode("i",{class:y.normalizeClass(f.iconClass)},null,2)]),y.createTextVNode(" "+y.toDisplayString(T),1)]),_:2},1032,["label","value"]))),128))]),_:1},8,["modelValue","onChange"])]),_:1},8,["visible"])])),(y.openBlock(!0),y.createElementBlock(y.Fragment,null,y.renderList(t.speciesList,(f,T)=>y.withDirectives((y.openBlock(),y.createBlock(d,{key:T,entry:f.taxo,uuid:f.uuid,biologicalSex:f.biologicalSex,displayWarning:f.displayWarning,displayLatestChanges:f.displayLatestChanges,isLegacy:f.isLegacy,ref_for:!0,ref:T,enableOpenMapUI:r.enableOpenMapUI,openMapOptions:r.openMapOptions,disableUI:r.disableUI,onViewLatestMap:o.viewLatestMap,onResourceSelected:o.resourceSelected,onReady:o.FlatmapReady,onPanZoomCallback:o.panZoomCallback,connectivityInfoSidebar:r.connectivityInfoSidebar,onConnectivityInfoOpen:o.onConnectivityInfoOpen,onConnectivityInfoClose:o.onConnectivityInfoClose,onOpenMap:e[1]||(e[1]=Q=>t.$emit("open-map",Q)),onPathwaySelectionChanged:o.onSelectionsDataChanged,minZoom:r.minZoom,helpMode:t.activeSpecies==T&&r.helpMode,helpModeActiveItem:r.helpModeActiveItem,helpModeDialog:r.helpModeDialog,helpModeInitialIndex:-2,onHelpModeLastItem:o.onHelpModeLastItem,onShownTooltip:o.onTooltipShown,onShownMapTooltip:o.onMapTooltipShown,renderAtMounted:r.renderAtMounted,displayMinimap:r.displayMinimap,showStarInLegend:r.showStarInLegend,style:{height:"100%"},flatmapAPI:r.flatmapAPI,sparcAPI:r.sparcAPI},null,8,["entry","uuid","biologicalSex","displayWarning","displayLatestChanges","isLegacy","enableOpenMapUI","openMapOptions","disableUI","onViewLatestMap","onResourceSelected","onReady","onPanZoomCallback","connectivityInfoSidebar","onConnectivityInfoOpen","onConnectivityInfoClose","onPathwaySelectionChanged","minZoom","helpMode","helpModeActiveItem","helpModeDialog","onHelpModeLastItem","onShownTooltip","onShownMapTooltip","renderAtMounted","displayMinimap","showStarInLegend","flatmapAPI","sparcAPI"])),[[y.vShow,t.activeSpecies==T]])),128))],512)}const LGt=np(QGt,[["render",bGt],["__scopeId","data-v-5364de02"]]);To.FlatmapVuer=CH,To.MultiFlatmapVuer=LGt,Object.defineProperty(To,Symbol.toStringTag,{value:"Module"})});