@abi-software/flatmapvuer 1.19.0 → 1.20.0

package/dist/flatmapvuer.js

@@ -8538,7 +8538,7 @@ var A_ = /*#__PURE__*/ n_(S_, [["render", k_], ["__scopeId", "data-v-3238f52a"]]
 	return i < a ? -1 : +(i > a);
 }, R_ = function() {
 	this.initialise = function(e) {
-		this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.hasSingleConnectivityList = !1, this.rawURLs = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "map", this.noMapConnectivity = !1;
+		this.flatmapAPI = e, this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.hasSingleConnectivityList = !1, this.rawURLs = [], this.expertConsultants = [], this.controller = void 0, this.uberons = [], this.lookUp = [], this.connectivitySource = "map", this.noMapConnectivity = !1;
 	}, this.createTooltipData = async function(e, t) {
 		let n;
 		n = t.feature.hyperlinks && t.feature.hyperlinks.length > 0 ? t.feature.hyperlinks : this.rawURLs;
@@ -8569,6 +8569,7 @@ var A_ = /*#__PURE__*/ n_(S_, [["render", k_], ["__scopeId", "data-v-3238f52a"]]
 			title: t.label,
 			featureId: t.resource,
 			hyperlinks: n,
+			"expert-consultants": this.expertConsultants,
 			provenanceTaxonomy: t.provenanceTaxonomy,
 			provenanceTaxonomyLabel: r,
 			connectivitySource: this.connectivitySource,
@@ -8633,7 +8634,7 @@ var A_ = /*#__PURE__*/ n_(S_, [["render", k_], ["__scopeId", "data-v-3238f52a"]]
 	}, this.retrieveFlatmapKnowledgeForEvent = async function(e, t) {
 		this.controller && this.controller.abort(), this.controller = new AbortController();
 		let n = t.resource;
-		if (this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.rawURLs = [], !n || n.length === 0 || !n[0]) return;
+		if (this.destinations = [], this.origins = [], this.components = [], this.destinationsWithDatasets = [], this.originsWithDatasets = [], this.componentsWithDatasets = [], this.destinationsCombinations = [], this.originsCombinations = [], this.componentsCombinations = [], this.singleConnectivityList = [], this.rawURLs = [], this.expertConsultants = [], !n || n.length === 0 || !n[0]) return;
 		let r = await this.queryForConnectivityNew(e, n[0]);
 		return await Promise.all([r]);
 	}, this.queryForConnectivityNew = async function(e, t, n = "map", r = !0) {
@@ -8644,13 +8645,13 @@ var A_ = /*#__PURE__*/ n_(S_, [["render", k_], ["__scopeId", "data-v-3238f52a"]]
 					this.connectivitySource === "map" && (this.noMapConnectivity = !1);
 					let t = i;
 					r ? this.processConnectivity(e, t).then((e) => {
-						i.references && (this.rawURLs = [...i.references]), n(e);
+						i.references && (this.rawURLs = [...i.references]), i["expert-consultants"] && (this.expertConsultants = [...i["expert-consultants"]]), n(e);
 					}) : n(t);
 				} else this.connectivitySource === "map" ? (this.connectivitySource = "sckan", this.noMapConnectivity = !0, e.queryKnowledge(t).then((t) => {
 					if (this.checkConnectivityExists(t)) {
 						let i = t;
 						r ? this.processConnectivity(e, i).then((e) => {
-							t.references && (this.rawURLs = [...t.references]), n(e);
+							t.references && (this.rawURLs = [...t.references]), t["expert-consultants"] && (this.expertConsultants = [...t["expert-consultants"]]), n(e);
 						}) : n(i);
 					} else n(!1);
 				}).catch(() => n(!1))) : n(!1);

package/dist/flatmapvuer.umd.cjs

@@ -13,7 +13,7 @@ usage: app.provide(ZINDEX_INJECTION_KEY, { current: 0 })`),{initialZIndex:i,curr
     <circle cx="12.5" cy="12.5" r="9" fill="#fff"></circle>
     <text x="12" y="17.5" style="font-size:14px;fill:#000;text-anchor:middle">2</text>
   </svg>
-</div>`,dg=function(e){return e?[...new Set(e.map(e=>JSON.stringify(e)))].map(e=>JSON.parse(e)):[]},fg=function(e){if(!e)return[];let t=new Set,n=[];return e.forEach(e=>{let{id:r,name:i}=e,a=`${r.toLowerCase()}:${i.toLowerCase()}`;t.has(a)||(t.add(a),n.push(e))}),n},pg=[],mg=async function(e,t){let n=t.filter(e=>pg.some(t=>t.taxon===e)),r=pg.filter(e=>n.includes(e.taxon)),i=t.filter(e=>!n.includes(e));if(i.length){let t=await e.queryLabels(i);if(t.length)return t.forEach(e=>{let{entity:t,label:n}=e;n===`Mammalia`&&(n=`Mammalia not otherwise specified`);let i={taxon:t,label:n};r.push(i),pg.push(i)}),r}else return r},hg=function(e,t){if(!e||!t)return!1;let n=JSON.stringify(e),r=JSON.stringify(t);return n.indexOf(r)!==-1},gg=(e,t)=>{let n=e.name??e,r=t.name??t,i=n.toUpperCase(),a=r.toUpperCase();return i<a?-1:+(i>a)},_g=function(){this.initialise=function(e){this.flatmapAPI=e,this.destinations=[],this.origins=[],this.components=[],this.destinationsWithDatasets=[],this.originsWithDatasets=[],this.componentsWithDatasets=[],this.destinationsCombinations=[],this.originsCombinations=[],this.componentsCombinations=[],this.singleConnectivityList=[],this.hasSingleConnectivityList=!1,this.rawURLs=[],this.controller=void 0,this.uberons=[],this.lookUp=[],this.connectivitySource=`map`,this.noMapConnectivity=!1},this.createTooltipData=async function(e,t){let n;n=t.feature.hyperlinks&&t.feature.hyperlinks.length>0?t.feature.hyperlinks:this.rawURLs;let r;if(t.provenanceTaxonomy){r=[];try{let n=await mg(e,t.provenanceTaxonomy);n.length&&n.forEach(e=>{let{label:t}=e;r.push(t)})}catch(e){console.log(e)}}return{destinations:this.destinations,origins:this.origins,components:this.components,destinationsWithDatasets:fg(this.destinationsWithDatasets),originsWithDatasets:fg(this.originsWithDatasets),componentsWithDatasets:fg(this.componentsWithDatasets),destinationsCombinations:this.destinationsCombinations,originsCombinations:this.originsCombinations,componentsCombinations:this.componentsCombinations,hasSingleConnectivityList:this.singleConnectivityList.length>0,title:t.label,featureId:t.resource,hyperlinks:n,provenanceTaxonomy:t.provenanceTaxonomy,provenanceTaxonomyLabel:r,connectivitySource:this.connectivitySource,noMapConnectivity:this.noMapConnectivity}},this.updateTooltipData=function(e){return{...e,origins:this.origins,originsWithDatasets:fg(this.originsWithDatasets),components:this.components,componentsWithDatasets:fg(this.componentsWithDatasets),destinations:this.destinations,destinationsWithDatasets:fg(this.destinationsWithDatasets),destinationsCombinations:this.destinationsCombinations,originsCombinations:this.originsCombinations,componentsCombinations:this.componentsCombinations,connectivitySource:this.connectivitySource,noMapConnectivity:this.noMapConnectivity}},this.createComponentsLabelList=function(e,t){let n=[];return e.forEach(e=>{n.push(this.createLabelFromNeuralNode(e[0]),t),e.length===2&&n.push(this.createLabelFromNeuralNode(e[1]),t)}),n},this.createLabelLookup=async function(e,t){let n={};this.uberons=[];let r=await mg(e,t);return r.length&&r.forEach(e=>{let{taxon:t,label:r}=e;n[t]=r,this.uberons.push({id:t,name:r})}),n},this.buildConnectivitySqlStatement=function(e){let t=`select knowledge from knowledge where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.buildLabelSqlStatement=function(e){let t=`select entity, label from labels where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.findAllIdsFromConnectivity=function(e){let t=e.connectivity.flat(),n=[...new Set(t)],r=[];return n.forEach(e=>{Array.isArray(e)?r.push(e.flat()):r.push(e)}),[...new Set(r.flat())]},this.flattenConnectivity=function(e){let t=e.flat(),n=[...new Set(t)],r=[];return n.forEach(e=>{Array.isArray(e)?r.push(e.flat()):r.push(e)}),r.flat()},this.findComponents=function(e,t,n,r){let i=dg(e.connectivity.flat()),a=[],o=!1;return i.forEach(e=>{o=!1,hg(t,e)&&(o=!0),r&&hg(r,e)&&(o=!0),hg(n,e)&&(o=!0),o||a.push(e)}),a},this.retrieveFlatmapKnowledgeForEvent=async function(e,t){this.controller&&this.controller.abort(),this.controller=new AbortController;let n=t.resource;if(this.destinations=[],this.origins=[],this.components=[],this.destinationsWithDatasets=[],this.originsWithDatasets=[],this.componentsWithDatasets=[],this.destinationsCombinations=[],this.originsCombinations=[],this.componentsCombinations=[],this.singleConnectivityList=[],this.rawURLs=[],!n||n.length===0||!n[0])return;let r=await this.queryForConnectivityNew(e,n[0]);return await Promise.all([r])},this.queryForConnectivityNew=async function(e,t,n=`map`,r=!0){let i=/^sckan-(\d{4})/.exec(e.knowledgeSource||``),o=(i?Number(i[1]):0)>=2026,s=e.mapMetadata.uuid,c=this.flatmapAPI;return this.connectivitySource=o?`sckan`:n,o&&(this.singleConnectivityList=await(0,a.querySingleConnectivityList)(c,s,t)),new Promise(n=>{(this.connectivitySource===`map`?this.queryMapConnectivity(e.mapMetadata.uuid,t):e.queryKnowledge(t)).then(i=>{if(this.checkConnectivityExists(i)){this.connectivitySource===`map`&&(this.noMapConnectivity=!1);let t=i;r?this.processConnectivity(e,t).then(e=>{i.references&&(this.rawURLs=[...i.references]),n(e)}):n(t)}else this.connectivitySource===`map`?(this.connectivitySource=`sckan`,this.noMapConnectivity=!0,e.queryKnowledge(t).then(t=>{if(this.checkConnectivityExists(t)){let i=t;r?this.processConnectivity(e,i).then(e=>{t.references&&(this.rawURLs=[...t.references]),n(e)}):n(i)}else n(!1)}).catch(()=>n(!1))):n(!1)}).catch(e=>{e.name===`AbortError`||console.warn(`Unable to get the knowledge for the entity ${t}.`),n(!1)})})},this.queryMapConnectivity=async function(e,t){let n=this.flatmapAPI+`flatmap/${e}/connectivity/${t}`;try{let e=await fetch(n);if(!e.ok)throw Error(`Response status: ${e.status}`);return await e.json()}catch(e){throw Error(e,{cause:e})}},this.queryForConnectivity=function(e,t,n,r=!0){let i={sql:this.buildConnectivitySqlStatement(t)},a={method:`POST`,headers:{"Content-Type":`application/json`},body:JSON.stringify(i),...n?{signal:n}:{}};return new Promise(t=>{fetch(`${this.flatmapAPI}knowledge/query/`,a).then(e=>e.json()).then(n=>{if(this.connectivityExists(n)){let i=JSON.parse(n.values[0][0]);r?this.processConnectivity(e,i).then(e=>{t(e)}):t(i)}else t(!1)}).catch(e=>{e.name===`AbortError`||console.error(`Error:`,e),t(!1)})})},this.checkConnectivityExists=function(e){return e&&e.connectivity?.length},this.connectivityExists=function(e){return!!(e.values&&e.values.length>0&&JSON.parse(e.values[0][0]).connectivity&&JSON.parse(e.values[0][0]).connectivity.length>0)},this.findIfNodeIsSingle=function(e){return e.length===1?(console.error(`Server returns a single node`,e),e[0]):e.length===2&&e[1].length===0&&e[0]},this.createLabelFromNeuralNode=function(e,t){let n=this.findIfNodeIsSingle(e);if(n)return t[n];let r=t[e[0]];return e.length===2&&e[1].length>0&&e[1].forEach(e=>{t[e]==null?r+=`, ${e}`:r+=`, ${t[e]}`}),r},this.flattenAndFindDatasets=function(e,t,n){let r=this.flattenConnectivity(e),i=this.flattenConnectivity(t),a=this.flattenConnectivity(n);this.originsWithDatasets=this.uberons.filter(e=>r.indexOf(e.id)!==-1).sort(gg),this.componentsWithDatasets=this.uberons.filter(e=>i.indexOf(e.id)!==-1).sort(gg),this.destinationsWithDatasets=this.uberons.filter(e=>a.indexOf(e.id)!==-1).sort(gg),this.singleConnectivityList.length>0&&this.singleConnectivityList.forEach(r=>{let{sckanNodeId:i,sckanNodeLabel:a,mapNodeId:o,mapNodeLabel:s}=r;n.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.destinationsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.destinationsWithDatasets.push({id:n,name:s.split(`,`)[t]})})),e.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.originsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.originsWithDatasets.push({id:n,name:s.split(`,`)[t]})})),t.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.componentsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.componentsWithDatasets.push({id:n,name:s.split(`,`)[t]})}))})},this.processConnectivity=function(e,t){return new Promise(n=>{let r=[],i=[],a;t&&t[`node-phenotypes`]?([`ilxtr:hasSomaLocatedIn`].forEach(e=>{e in t[`node-phenotypes`]&&r.push(...t[`node-phenotypes`][e])}),r=dg(r),[`ilxtr:hasAxonPresynapticElementIn`,`ilxtr:hasAxonSensorySubcellularElementIn`].forEach(e=>{e in t[`node-phenotypes`]&&i.push(...t[`node-phenotypes`][e])}),i=dg(i)):(i=dg(t.axons),t.somas&&t.somas.length>0&&r.push(...t.somas),t.dendrites&&t.dendrites.length>0&&r.push(...t.dendrites),r=dg(r),a=t.somas);let o=this.findComponents(t,i,r,a),s=this.findAllIdsFromConnectivity(t);this.createLabelLookup(e,s).then(e=>{this.origins=r.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.components=o.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.destinations=i.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.flattenAndFindDatasets(r,o,i),n({ids:{dendrites:r,components:o,axons:i},labels:{origins:this.origins,components:this.components,destinations:this.destinations}})})})},this.buildPubmedSqlStatement=function(e){let t=`select distinct publication from publications where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.buildPubmedSqlStatementForModels=function(e){return`select distinct publication from publications where entity = '${e}'`},this.queryKnowledge=async(e,t)=>{let n=`${this.flatmapAPI}knowledge/query/`,r=await fetch(n,{method:`POST`,headers:{Accept:`application/json`},body:JSON.stringify({sql:e,params:t})});if(!r.ok)throw Error(`Cannot access ${n}`);let i=await r.json();if(`error`in i)throw TypeError(i.error);return i.values}};async function vg(e){let t=sessionStorage.getItem(`flatmap-knowledge`);if(t){let n=JSON.parse(t).filter(e=>e.references&&e.references.length).filter(t=>t.references.includes(e));if(n.length)return n.map(e=>e.id)}return[]}async function yg(e,t,n){let r=`select knowledge from knowledge
+</div>`,dg=function(e){return e?[...new Set(e.map(e=>JSON.stringify(e)))].map(e=>JSON.parse(e)):[]},fg=function(e){if(!e)return[];let t=new Set,n=[];return e.forEach(e=>{let{id:r,name:i}=e,a=`${r.toLowerCase()}:${i.toLowerCase()}`;t.has(a)||(t.add(a),n.push(e))}),n},pg=[],mg=async function(e,t){let n=t.filter(e=>pg.some(t=>t.taxon===e)),r=pg.filter(e=>n.includes(e.taxon)),i=t.filter(e=>!n.includes(e));if(i.length){let t=await e.queryLabels(i);if(t.length)return t.forEach(e=>{let{entity:t,label:n}=e;n===`Mammalia`&&(n=`Mammalia not otherwise specified`);let i={taxon:t,label:n};r.push(i),pg.push(i)}),r}else return r},hg=function(e,t){if(!e||!t)return!1;let n=JSON.stringify(e),r=JSON.stringify(t);return n.indexOf(r)!==-1},gg=(e,t)=>{let n=e.name??e,r=t.name??t,i=n.toUpperCase(),a=r.toUpperCase();return i<a?-1:+(i>a)},_g=function(){this.initialise=function(e){this.flatmapAPI=e,this.destinations=[],this.origins=[],this.components=[],this.destinationsWithDatasets=[],this.originsWithDatasets=[],this.componentsWithDatasets=[],this.destinationsCombinations=[],this.originsCombinations=[],this.componentsCombinations=[],this.singleConnectivityList=[],this.hasSingleConnectivityList=!1,this.rawURLs=[],this.expertConsultants=[],this.controller=void 0,this.uberons=[],this.lookUp=[],this.connectivitySource=`map`,this.noMapConnectivity=!1},this.createTooltipData=async function(e,t){let n;n=t.feature.hyperlinks&&t.feature.hyperlinks.length>0?t.feature.hyperlinks:this.rawURLs;let r;if(t.provenanceTaxonomy){r=[];try{let n=await mg(e,t.provenanceTaxonomy);n.length&&n.forEach(e=>{let{label:t}=e;r.push(t)})}catch(e){console.log(e)}}return{destinations:this.destinations,origins:this.origins,components:this.components,destinationsWithDatasets:fg(this.destinationsWithDatasets),originsWithDatasets:fg(this.originsWithDatasets),componentsWithDatasets:fg(this.componentsWithDatasets),destinationsCombinations:this.destinationsCombinations,originsCombinations:this.originsCombinations,componentsCombinations:this.componentsCombinations,hasSingleConnectivityList:this.singleConnectivityList.length>0,title:t.label,featureId:t.resource,hyperlinks:n,"expert-consultants":this.expertConsultants,provenanceTaxonomy:t.provenanceTaxonomy,provenanceTaxonomyLabel:r,connectivitySource:this.connectivitySource,noMapConnectivity:this.noMapConnectivity}},this.updateTooltipData=function(e){return{...e,origins:this.origins,originsWithDatasets:fg(this.originsWithDatasets),components:this.components,componentsWithDatasets:fg(this.componentsWithDatasets),destinations:this.destinations,destinationsWithDatasets:fg(this.destinationsWithDatasets),destinationsCombinations:this.destinationsCombinations,originsCombinations:this.originsCombinations,componentsCombinations:this.componentsCombinations,connectivitySource:this.connectivitySource,noMapConnectivity:this.noMapConnectivity}},this.createComponentsLabelList=function(e,t){let n=[];return e.forEach(e=>{n.push(this.createLabelFromNeuralNode(e[0]),t),e.length===2&&n.push(this.createLabelFromNeuralNode(e[1]),t)}),n},this.createLabelLookup=async function(e,t){let n={};this.uberons=[];let r=await mg(e,t);return r.length&&r.forEach(e=>{let{taxon:t,label:r}=e;n[t]=r,this.uberons.push({id:t,name:r})}),n},this.buildConnectivitySqlStatement=function(e){let t=`select knowledge from knowledge where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.buildLabelSqlStatement=function(e){let t=`select entity, label from labels where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.findAllIdsFromConnectivity=function(e){let t=e.connectivity.flat(),n=[...new Set(t)],r=[];return n.forEach(e=>{Array.isArray(e)?r.push(e.flat()):r.push(e)}),[...new Set(r.flat())]},this.flattenConnectivity=function(e){let t=e.flat(),n=[...new Set(t)],r=[];return n.forEach(e=>{Array.isArray(e)?r.push(e.flat()):r.push(e)}),r.flat()},this.findComponents=function(e,t,n,r){let i=dg(e.connectivity.flat()),a=[],o=!1;return i.forEach(e=>{o=!1,hg(t,e)&&(o=!0),r&&hg(r,e)&&(o=!0),hg(n,e)&&(o=!0),o||a.push(e)}),a},this.retrieveFlatmapKnowledgeForEvent=async function(e,t){this.controller&&this.controller.abort(),this.controller=new AbortController;let n=t.resource;if(this.destinations=[],this.origins=[],this.components=[],this.destinationsWithDatasets=[],this.originsWithDatasets=[],this.componentsWithDatasets=[],this.destinationsCombinations=[],this.originsCombinations=[],this.componentsCombinations=[],this.singleConnectivityList=[],this.rawURLs=[],this.expertConsultants=[],!n||n.length===0||!n[0])return;let r=await this.queryForConnectivityNew(e,n[0]);return await Promise.all([r])},this.queryForConnectivityNew=async function(e,t,n=`map`,r=!0){let i=/^sckan-(\d{4})/.exec(e.knowledgeSource||``),o=(i?Number(i[1]):0)>=2026,s=e.mapMetadata.uuid,c=this.flatmapAPI;return this.connectivitySource=o?`sckan`:n,o&&(this.singleConnectivityList=await(0,a.querySingleConnectivityList)(c,s,t)),new Promise(n=>{(this.connectivitySource===`map`?this.queryMapConnectivity(e.mapMetadata.uuid,t):e.queryKnowledge(t)).then(i=>{if(this.checkConnectivityExists(i)){this.connectivitySource===`map`&&(this.noMapConnectivity=!1);let t=i;r?this.processConnectivity(e,t).then(e=>{i.references&&(this.rawURLs=[...i.references]),i[`expert-consultants`]&&(this.expertConsultants=[...i[`expert-consultants`]]),n(e)}):n(t)}else this.connectivitySource===`map`?(this.connectivitySource=`sckan`,this.noMapConnectivity=!0,e.queryKnowledge(t).then(t=>{if(this.checkConnectivityExists(t)){let i=t;r?this.processConnectivity(e,i).then(e=>{t.references&&(this.rawURLs=[...t.references]),t[`expert-consultants`]&&(this.expertConsultants=[...t[`expert-consultants`]]),n(e)}):n(i)}else n(!1)}).catch(()=>n(!1))):n(!1)}).catch(e=>{e.name===`AbortError`||console.warn(`Unable to get the knowledge for the entity ${t}.`),n(!1)})})},this.queryMapConnectivity=async function(e,t){let n=this.flatmapAPI+`flatmap/${e}/connectivity/${t}`;try{let e=await fetch(n);if(!e.ok)throw Error(`Response status: ${e.status}`);return await e.json()}catch(e){throw Error(e,{cause:e})}},this.queryForConnectivity=function(e,t,n,r=!0){let i={sql:this.buildConnectivitySqlStatement(t)},a={method:`POST`,headers:{"Content-Type":`application/json`},body:JSON.stringify(i),...n?{signal:n}:{}};return new Promise(t=>{fetch(`${this.flatmapAPI}knowledge/query/`,a).then(e=>e.json()).then(n=>{if(this.connectivityExists(n)){let i=JSON.parse(n.values[0][0]);r?this.processConnectivity(e,i).then(e=>{t(e)}):t(i)}else t(!1)}).catch(e=>{e.name===`AbortError`||console.error(`Error:`,e),t(!1)})})},this.checkConnectivityExists=function(e){return e&&e.connectivity?.length},this.connectivityExists=function(e){return!!(e.values&&e.values.length>0&&JSON.parse(e.values[0][0]).connectivity&&JSON.parse(e.values[0][0]).connectivity.length>0)},this.findIfNodeIsSingle=function(e){return e.length===1?(console.error(`Server returns a single node`,e),e[0]):e.length===2&&e[1].length===0&&e[0]},this.createLabelFromNeuralNode=function(e,t){let n=this.findIfNodeIsSingle(e);if(n)return t[n];let r=t[e[0]];return e.length===2&&e[1].length>0&&e[1].forEach(e=>{t[e]==null?r+=`, ${e}`:r+=`, ${t[e]}`}),r},this.flattenAndFindDatasets=function(e,t,n){let r=this.flattenConnectivity(e),i=this.flattenConnectivity(t),a=this.flattenConnectivity(n);this.originsWithDatasets=this.uberons.filter(e=>r.indexOf(e.id)!==-1).sort(gg),this.componentsWithDatasets=this.uberons.filter(e=>i.indexOf(e.id)!==-1).sort(gg),this.destinationsWithDatasets=this.uberons.filter(e=>a.indexOf(e.id)!==-1).sort(gg),this.singleConnectivityList.length>0&&this.singleConnectivityList.forEach(r=>{let{sckanNodeId:i,sckanNodeLabel:a,mapNodeId:o,mapNodeLabel:s}=r;n.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.destinationsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.destinationsWithDatasets.push({id:n,name:s.split(`,`)[t]})})),e.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.originsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.originsWithDatasets.push({id:n,name:s.split(`,`)[t]})})),t.find(e=>JSON.stringify(e)===JSON.stringify(i))&&(this.componentsCombinations.push({sckanId:i,sckanLabel:a,mapId:o,mapLabel:s}),o.forEach((e,t)=>{let n=typeof e==`string`?e:e[0];n&&this.componentsWithDatasets.push({id:n,name:s.split(`,`)[t]})}))})},this.processConnectivity=function(e,t){return new Promise(n=>{let r=[],i=[],a;t&&t[`node-phenotypes`]?([`ilxtr:hasSomaLocatedIn`].forEach(e=>{e in t[`node-phenotypes`]&&r.push(...t[`node-phenotypes`][e])}),r=dg(r),[`ilxtr:hasAxonPresynapticElementIn`,`ilxtr:hasAxonSensorySubcellularElementIn`].forEach(e=>{e in t[`node-phenotypes`]&&i.push(...t[`node-phenotypes`][e])}),i=dg(i)):(i=dg(t.axons),t.somas&&t.somas.length>0&&r.push(...t.somas),t.dendrites&&t.dendrites.length>0&&r.push(...t.dendrites),r=dg(r),a=t.somas);let o=this.findComponents(t,i,r,a),s=this.findAllIdsFromConnectivity(t);this.createLabelLookup(e,s).then(e=>{this.origins=r.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.components=o.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.destinations=i.map(t=>this.createLabelFromNeuralNode(t,e)).sort(gg),this.flattenAndFindDatasets(r,o,i),n({ids:{dendrites:r,components:o,axons:i},labels:{origins:this.origins,components:this.components,destinations:this.destinations}})})})},this.buildPubmedSqlStatement=function(e){let t=`select distinct publication from publications where entity in (`;if(e.length===1)t+=`'${e[0]}')`;else if(e.length>1)for(let n in e)t+=`'${e[n]}'${n>=e.length-1?`)`:`,`} `;return t},this.buildPubmedSqlStatementForModels=function(e){return`select distinct publication from publications where entity = '${e}'`},this.queryKnowledge=async(e,t)=>{let n=`${this.flatmapAPI}knowledge/query/`,r=await fetch(n,{method:`POST`,headers:{Accept:`application/json`},body:JSON.stringify({sql:e,params:t})});if(!r.ok)throw Error(`Cannot access ${n}`);let i=await r.json();if(`error`in i)throw TypeError(i.error);return i.values}};async function vg(e){let t=sessionStorage.getItem(`flatmap-knowledge`);if(t){let n=JSON.parse(t).filter(e=>e.references&&e.references.length).filter(t=>t.references.includes(e));if(n.length)return n.map(e=>e.id)}return[]}async function yg(e,t,n){let r=`select knowledge from knowledge
     where source="${bg(e)}" and
     knowledge like "%${t}%" order by source desc`;return(await n.queryKnowledge(r)).map(e=>JSON.parse(e)).map(e=>e.id)}function bg(e){return xg(e.mapMetadata)}function xg(e){let t=``;if(e?.connectivity){let n=e.connectivity;`knowledge-source`in n?t=n[`knowledge-source`]:`npo`in n&&(t=`${n.npo.release}-npo`)}return t}async function Sg(e,t){let n=bg(e),r=`select knowledge from knowledge
     where source="${n}"

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@abi-software/flatmapvuer",
-  "version": "1.19.0",
+  "version": "1.20.0",
   "license": "Apache-2.0",
   "engines": {
     "node": "^24.20.0"
@@ -50,7 +50,7 @@
     "./src/*": "./src/*"
   },
   "dependencies": {
-    "@abi-software/map-utilities": "1.12.0",
+    "@abi-software/map-utilities": "1.13.0",
     "@abi-software/sparc-annotation": "0.3.2",
     "@abi-software/svg-sprite": "1.4.0",
     "@element-plus/icons-vue": "^2.3.2",

package/src/App.vue

@@ -247,6 +247,9 @@ export default {
           taxo: 'UBERON:0001759',
           uuid: '0ea568ec-538d-52f3-a8e7-0437d844e1cf',
         },
+        FC: {
+          uuid: '0525bdec-ce68-5230-b10e-bdde3269e55f',
+        },
         Sample: { taxo: 'NCBITaxon:1', displayWarning: true },
         'Functional Connectivity': {
           taxo: 'FunctionalConnectivity',
@@ -273,8 +276,8 @@ export default {
       mapSettings: [],
       //flatmapAPI: "https://mapcore-demo.org/current/flatmap/v2/"
       //flatmapAPI: "https://mapcore-demo.org/devel/flatmap/v3/"
-      //flatmapAPI: "https://mapcore-demo.org/current/flatmap/v3/",
-      flatmapAPI: 'https://mapcore-demo.org/devel/flatmap/v4/',
+      flatmapAPI: "https://mapcore-demo.org/current/flatmap/v3/",
+      //flatmapAPI: 'https://mapcore-demo.org/devel/flatmap/v4/',
       //flatmapAPI: 'https://mapcore-demo.org/curation/flatmap/',
       //flatmapAPI: "https://mapcore-demo.org/fccb/flatmap/"
       //flatmapAPI: "https://mapcore-demo.org/staging/flatmap/v1/"

package/src/services/flatmapQueries.js

@@ -123,6 +123,7 @@ let FlatmapQueries = function () {
     this.singleConnectivityList = [];
     this.hasSingleConnectivityList = false;
     this.rawURLs = [];
+    this.expertConsultants = [];
     this.controller = undefined;
     this.uberons = [];
     this.lookUp = [];
@@ -167,6 +168,7 @@ let FlatmapQueries = function () {
       title: eventData.label,
       featureId: eventData.resource,
       hyperlinks: hyperlinks,
+      'expert-consultants': this.expertConsultants,
       provenanceTaxonomy: eventData.provenanceTaxonomy,
       provenanceTaxonomyLabel: taxonomyLabel,
       connectivitySource: this.connectivitySource,
@@ -317,6 +319,7 @@ let FlatmapQueries = function () {
     this.componentsCombinations = [];
     this.singleConnectivityList = [];
     this.rawURLs = [];
+    this.expertConsultants = [];
     if (!keastIds || keastIds.length === 0 || !keastIds[0]) return;
 
     let prom1 = await this.queryForConnectivityNew(mapImp, keastIds[0]); // This on returns a promise so dont need 'await'
@@ -362,6 +365,9 @@ let FlatmapQueries = function () {
                   // with publications from both PubMed and Others
                   this.rawURLs = [...response.references];
                 }
+                if (response['expert-consultants']) {
+                  this.expertConsultants = [...response['expert-consultants']];
+                }
                 resolve(processedConnectivity);
               });
             } else resolve(connectivity);
@@ -383,6 +389,9 @@ let FlatmapQueries = function () {
                         // with publications from both PubMed and Others
                         this.rawURLs = [...fallbackResponse.references];
                       }
+                      if (fallbackResponse['expert-consultants']) {
+                        this.expertConsultants = [...fallbackResponse['expert-consultants']];
+                      }
                       resolve(processedConnectivity);
                     });
                   } else resolve(connectivity);