@abi-software/flatmapvuer 1.10.3-beta.0 → 1.10.3-beta.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@abi-software/flatmapvuer",
3
- "version": "1.10.3-beta.0",
3
+ "version": "1.10.3-beta.1",
4
4
  "license": "Apache-2.0",
5
5
  "files": [
6
6
  "dist/*",
@@ -2986,6 +2986,23 @@ export default {
2986
2986
  }
2987
2987
  const connectionFilters = [];
2988
2988
  const flatmapKnowledge = _flatmapKnowledge || this.getFlatmapKnowledge();
2989
+ const mapKnowledge = this.mapImp.pathways.paths;
2990
+ flatmapKnowledge.forEach((knowledge) => {
2991
+ const id = knowledge.id;
2992
+ if (id) {
2993
+ const matchObj = mapKnowledge[id];
2994
+ if (matchObj) {
2995
+ const mapConnectivity = matchObj.connectivity;
2996
+ const mapNodePhenotypes = matchObj['node-phenotypes'];
2997
+ knowledge.connectivity = [...knowledge.connectivity, ...mapConnectivity];
2998
+ for (let key in knowledge['node-phenotypes']) {
2999
+ if (mapNodePhenotypes[key]) {
3000
+ knowledge['node-phenotypes'][key].push(...mapNodePhenotypes[key]);
3001
+ }
3002
+ }
3003
+ }
3004
+ }
3005
+ })
2989
3006
  const originItems = await extractOriginItems(this.flatmapAPI, flatmapKnowledge);
2990
3007
  const viaItems = await extractViaItems(this.flatmapAPI, flatmapKnowledge);
2991
3008
  const destinationItems = await extractDestinationItems(this.flatmapAPI, flatmapKnowledge);
@@ -2994,7 +3011,7 @@ export default {
2994
3011
  const key = JSON.stringify(item.key);
2995
3012
  return {
2996
3013
  key: `flatmap.connectivity.source.${facet}.${key}`,
2997
- label: item.label
3014
+ label: item.label || key
2998
3015
  };
2999
3016
  }
3000
3017
 
@@ -3008,6 +3025,18 @@ export default {
3008
3025
  childrenList = destinationItems.map((item) => transformItem(facet, item));
3009
3026
  }
3010
3027
 
3028
+ // Those without label but key should be below
3029
+ childrenList = childrenList.sort((a, b) => {
3030
+ const isAlpha = (str) => /^[a-zA-Z]/.test(str);
3031
+ const aAlpha = isAlpha(a.label);
3032
+ const bAlpha = isAlpha(b.label);
3033
+
3034
+ if (aAlpha && !bAlpha) return -1;
3035
+ if (!aAlpha && bAlpha) return 1;
3036
+
3037
+ return a.label.localeCompare(b.label);
3038
+ });
3039
+
3011
3040
  connectionFilters.push({
3012
3041
  key: `flatmap.connectivity.source.${facet}`,
3013
3042
  label: facet,