@abi-software/flatmapvuer 0.5.6 → 0.5.7-alpha

package/dist/flatmapvuer.common.js

@@ -17740,7 +17740,7 @@ if (typeof window !== 'undefined') {
 // Indicate to webpack that this file can be concatenated
 /* harmony default export */ var setPublicPath = (null);
 
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/FlatmapVuer.vue?vue&type=template&id=76169acb&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/FlatmapVuer.vue?vue&type=template&id=76169acb&scoped=true&
 var render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -18914,7 +18914,7 @@ var es_number_constructor_js_ = __webpack_require__("f989");
 var external_vue_ = __webpack_require__("8bbf");
 var external_vue_default = /*#__PURE__*/__webpack_require__.n(external_vue_);
 
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Tooltip.vue?vue&type=template&id=3440f7c4&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Tooltip.vue?vue&type=template&id=3440f7c4&scoped=true&
 var Tooltipvue_type_template_id_3440f7c4_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -19102,7 +19102,7 @@ var locale_default = /*#__PURE__*/__webpack_require__.n(locale);
 
 var EventBus = new external_vue_default.a();
 /* harmony default export */ var components_EventBus = (EventBus);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ExternalResourceCard.vue?vue&type=template&id=14172b61&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ExternalResourceCard.vue?vue&type=template&id=14172b61&scoped=true&
 var ExternalResourceCardvue_type_template_id_14172b61_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -19474,7 +19474,7 @@ var Tooltip_component = normalizeComponent(
 )
 
 /* harmony default export */ var Tooltip = (Tooltip_component.exports);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/SelectionsGroup.vue?vue&type=template&id=b125dcae&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/SelectionsGroup.vue?vue&type=template&id=b125dcae&scoped=true&
 var SelectionsGroupvue_type_template_id_b125dcae_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -19607,9 +19607,9 @@ external_vue_default.a.use(lib_row_default.a);
 /* harmony default export */ var SelectionsGroupvue_type_script_lang_js_ = ({
   name: "SelectionsGroup",
   methods: {
-    /**
-     * Function to toggle paths to default.
-     * Also called when the associated button is pressed.
+    /**
+     * Function to toggle paths to default.
+     * Also called when the associated button is pressed.
      */
     reset: function reset() {
       var _this = this;
@@ -19740,7 +19740,7 @@ var SelectionsGroup_component = normalizeComponent(
 )
 
 /* harmony default export */ var SelectionsGroup = (SelectionsGroup_component.exports);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/TreeControls.vue?vue&type=template&id=4c70eb11&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/TreeControls.vue?vue&type=template&id=4c70eb11&scoped=true&
 var TreeControlsvue_type_template_id_4c70eb11_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -19840,8 +19840,8 @@ external_vue_default.a.use(lib_color_picker_default.a);
 external_vue_default.a.use(lib_row_default.a);
 external_vue_default.a.use(lib_tree_default.a);
 
-/**
- * A vue component for toggling visibility of various regions.
+/**
+ * A vue component for toggling visibility of various regions.
  */
 /* harmony default export */ var TreeControlsvue_type_script_lang_js_ = ({
   name: "TreeControls",
@@ -19936,7 +19936,7 @@ var TreeControls_component = normalizeComponent(
 // EXTERNAL MODULE: external "@abi-software/svg-sprite"
 var svg_sprite_ = __webpack_require__("429c");
 
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/legends/SvgLegends.vue?vue&type=template&id=863a3716&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/legends/SvgLegends.vue?vue&type=template&id=863a3716&scoped=true&
 var SvgLegendsvue_type_template_id_863a3716_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -20454,21 +20454,25 @@ var flatmapQueries_FlatmapQueries = function FlatmapQueries() {
     var componentsFlat = this.flattenConntectivity(components);
     var axonsFlat = this.flattenConntectivity(axons);
     var dendritesFlat = this.flattenConntectivity(dendrites);
+    console.log("uber in flattehn find datasets", this.uberons);
+    window.uberons = this.uberons;
+    window.componentsFlat = componentsFlat;
 
     // Filter for the anatomy which is annotated on datasets
     this.destinationsWithDatasets = this.uberons.filter(function (ub) {
-      return axonsFlat.indexOf(ub.id) !== -1;
+      return axonsFlat.indexOf(ub) !== -1;
     });
     this.originsWithDatasets = this.uberons.filter(function (ub) {
-      return dendritesFlat.indexOf(ub.id) !== -1;
+      return dendritesFlat.indexOf(ub) !== -1;
     });
     this.componentsWithDatasets = this.uberons.filter(function (ub) {
-      return componentsFlat.indexOf(ub.id) !== -1;
+      return componentsFlat.indexOf(ub) !== -1;
     });
   };
   this.processConnectivity = function (connectivity) {
     var _this4 = this;
     return new Promise(function (resolve) {
+      console.log(connectivity);
       // Filter the origin and destinations from components
       var components = _this4.findComponents(connectivity);
 
@@ -20478,9 +20482,11 @@ var flatmapQueries_FlatmapQueries = function FlatmapQueries() {
 
       // Create list of ids to get labels for
       var conIds = _this4.findAllIdsFromConnectivity(connectivity);
+      console.log(conIds);
 
       // Create readable labels from the nodes. Setting this to 'this.origins' updates the display
       _this4.createLabelLookup(conIds).then(function (lookUp) {
+        console.log("after label lookup", _this4.uberons);
         _this4.destinations = axons.map(function (a) {
           return _this4.createLabelFromNeuralNode(a, lookUp);
         });
@@ -20775,8 +20781,8 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
     toggleDrawer: function toggleDrawer() {
       this.drawerOpen = !this.drawerOpen;
     },
-    /**
-     * Function to toggle colour/greyscale of organs.
+    /**
+     * Function to toggle colour/greyscale of organs.
      */
     setColour: function setColour(flag) {
       this.colourRadio = flag;
@@ -20787,8 +20793,8 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
         });
       }
     },
-    /**
-     * Function to toggle outlines f organs.
+    /**
+     * Function to toggle outlines f organs.
      */
     setOutlines: function setOutlines(flag) {
       this.outlineRadio = flag;
@@ -20799,9 +20805,9 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
         });
       }
     },
-    /**
-     * Function to toggle paths to default.
-     * Also called when the associated button is pressed.
+    /**
+     * Function to toggle paths to default.
+     * Also called when the associated button is pressed.
      */
     resetView: function resetView() {
       if (this.mapImp) {
@@ -20823,18 +20829,18 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
         }
       }
     },
-    /**
-     * Function to zoom in.
-     * Also called when the associated button is pressed.
+    /**
+     * Function to zoom in.
+     * Also called when the associated button is pressed.
      */
     zoomIn: function zoomIn() {
       if (this.mapImp) {
         this.mapImp.zoomIn();
       }
     },
-    /**
-     * Function to zoom out.
-     * Also called when the associated button is pressed.
+    /**
+     * Function to zoom out.
+     * Also called when the associated button is pressed.
      */
     zoomOut: function zoomOut() {
       if (this.mapImp) {
@@ -21290,9 +21296,9 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
     showPathwaysDrawer: function showPathwaysDrawer(flag) {
       this.drawerOpen = flag;
     },
-    /**
-     * Function to display features with annotation matching the provided term,
-     * with the option to display the label using displayLabel flag. 
+    /**
+     * Function to display features with annotation matching the provided term,
+     * with the option to display the label using displayLabel flag. 
      */
     searchAndShowResult: function searchAndShowResult(term, displayLabel) {
       if (this.mapImp) {
@@ -21317,8 +21323,8 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
       }
       return false;
     },
-    /**
-     * Get the list of suggested terms
+    /**
+     * Get the list of suggested terms
      */
     searchSuggestions: function searchSuggestions(term) {
       if (this.mapImp) return this.mapImp.search(term);
@@ -21371,9 +21377,9 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
       type: Boolean,
       default: false
     },
-    /**
-     * Flag to determine rather open map UI should be
-     * presented or not.
+    /**
+     * Flag to determine rather open map UI should be
+     * presented or not.
      */
     enableOpenMapUI: {
       type: Boolean,
@@ -21406,15 +21412,15 @@ var createUnfilledTooltipData = function createUnfilledTooltipData() {
       type: String,
       default: "'Observed In' controls and information are now included in AC maps. System control with FTU information has been added to the FC map."
     },
-    /**
-     * State containing state of the flatmap.
+    /**
+     * State containing state of the flatmap.
      */
     state: {
       type: Object,
       default: undefined
     },
-    /**
-     * Specify the endpoint of the flatmap server.
+    /**
+     * Specify the endpoint of the flatmap server.
      */
     flatmapAPI: {
       type: String,
@@ -21547,7 +21553,7 @@ var FlatmapVuer_component = normalizeComponent(
 )
 
 /* harmony default export */ var FlatmapVuer = (FlatmapVuer_component.exports);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"4c082826-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/MultiFlatmapVuer.vue?vue&type=template&id=8a1ab60a&scoped=true&
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"28e619b9-vue-loader-template"}!./node_modules/cache-loader/dist/cjs.js??ref--13-0!./node_modules/thread-loader/dist/cjs.js!./node_modules/babel-loader/lib!./node_modules/vue-loader/lib/loaders/templateLoader.js??ref--6!./node_modules/cache-loader/dist/cjs.js??ref--1-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/MultiFlatmapVuer.vue?vue&type=template&id=8a1ab60a&scoped=true&
 var MultiFlatmapVuervue_type_template_id_8a1ab60a_scoped_true_render = function render() {
   var _vm = this,
     _c = _vm._self._c;
@@ -21853,11 +21859,11 @@ var TAXON_UUID = {
         }
       }
     },
-    /**
-     * Function to switch to the latest existing map from 
-     * a legacy map of the same species. 
-     * 
-     * @private
+    /**
+     * Function to switch to the latest existing map from 
+     * a legacy map of the same species. 
+     * 
+     * @private
      */
     viewLatestMap: function viewLatestMap(state) {
       var keys = Object.keys(this.speciesList);
@@ -21869,10 +21875,10 @@ var TAXON_UUID = {
         }
       }
     },
-    /**
-     * Create a legacy entry with the provided information
-     * 
-     * @private
+    /**
+     * Create a legacy entry with the provided information
+     * 
+     * @private
      */
     createLegacyEntry: function createLegacyEntry(state, taxo, uuid) {
       if (uuid && taxo) {
@@ -21896,11 +21902,11 @@ var TAXON_UUID = {
         };
       }
     },
-    /**
-     * Function used to translate the legacy map state to one that can be used in current
-     * flatmap if required. If it is a legacy, an Select entry will be added
-     * 
-     * @private
+    /**
+     * Function used to translate the legacy map state to one that can be used in current
+     * flatmap if required. If it is a legacy, an Select entry will be added
+     * 
+     * @private
      */
     updateState: function updateState(state) {
       var _this4 = this;
@@ -21941,11 +21947,11 @@ var TAXON_UUID = {
         resolve(state);
       });
     },
-    /**
-     * Function used for getting the current states of the scene. This exported states 
-     * can be imported using the importStates method.
-     * 
-     * @public
+    /**
+     * Function used for getting the current states of the scene. This exported states 
+     * can be imported using the importStates method.
+     * 
+     * @public
      */
     getState: function getState() {
       var state = {
@@ -21956,11 +21962,11 @@ var TAXON_UUID = {
       state.state = map.getState();
       return state;
     },
-    /**
-     * Function used for importing the states of the scene. This exported states 
-     * can be imported using the read states method.
-     * 
-     * @public
+    /**
+     * Function used for importing the states of the scene. This exported states 
+     * can be imported using the read states method.
+     * 
+     * @public
      */
     setState: function setState(state) {
       var _this5 = this;
@@ -22003,9 +22009,9 @@ var TAXON_UUID = {
       type: Boolean,
       default: false
     },
-    /**
-     * Initial species for the flatmap.
-     * This value will be ignored if a valid state object is provided.
+    /**
+     * Initial species for the flatmap.
+     * This value will be ignored if a valid state object is provided.
      */
     initial: {
       type: String,
@@ -22027,9 +22033,9 @@ var TAXON_UUID = {
       type: Boolean,
       default: false
     },
-    /**
-     * Flag to determine rather open map UI should be
-     * presented or not.
+    /**
+     * Flag to determine rather open map UI should be
+     * presented or not.
      */
     enableOpenMapUI: {
       type: Boolean,
@@ -22077,15 +22083,15 @@ var TAXON_UUID = {
         };
       }
     },
-    /**
-     * State containing state of the flatmap.
+    /**
+     * State containing state of the flatmap.
      */
     state: {
       type: Object,
       default: undefined
     },
-    /**
-     * Specify the endpoint of the flatmap server.
+    /**
+     * Specify the endpoint of the flatmap server.
      */
     flatmapAPI: {
       type: String,