@abi-software/flatmapvuer 0.4.0-beta-2 → 0.4.0

package/dist/flatmapvuer.umd.min.js

@@ -1,2 +1,2 @@
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this.biologicalSex?e["biologicalSex"]=this.biologicalSex:t&&t.biologicalSex&&(e["biologicalSex"]=t.biologicalSex),t&&t.uuid&&(e["uuid"]=t.uuid),e}},setState:function(e){e&&(!this.mapImp||!e.entry||this.entry!=e.entry||e.biologicalSex&&e.biologicalSex!==this.biologicalSex?this.createFlatmap(e):e.viewport&&this.mapImp.setState(e.viewport))},restoreMapState:function(e){e&&(e.viewport&&this.mapImp.setState(e.viewport),e.searchTerm&&this.searchAndShowResult(e.searchTerm,!0))},createFlatmap:function(e){var t=this;if(this.mapImp||this.loading)e&&(this._stateToBeSet={viewport:e.viewport,searchTerm:e.searchTerm},this.mapImp&&!this.loading&&this.restoreMapState(this._stateToBeSet));else{this.loading=!0;var i=!1;this.displayMinimap&&(i={position:"top-right"});var n={taxon:this.entry};e?e.uuid?n={uuid:e.uuid}:e.entry&&(n.taxon=e.entry,e.biologicalSex?n["biologicalSex"]=e.biologicalSex:"NCBITaxon:9606"===n.taxon&&(n["biologicalSex"]="PATO:0000384")):this.biologicalSex&&(n["biologicalSex"]=this.biologicalSex);var o=this.mapManager.loadMap(n,this.$refs.display,this.eventCallback(),{featureInfo:this.featureInfo,"min-zoom":this.minZoom,layerControl:!0,pathControls:!0,searchable:this.searchable,tooltips:this.tooltips,minimap:i});o.then((function(i){t.mapImp=i,t.onFlatmapReady(),t._stateToBeSet?t.restoreMapState(t._stateToBeSet):t.restoreMapState(e)}))}},computePathControlsMaximumHeight:function(){var e=this.$refs.display;if(e){var t=getComputedStyle(e),i=parseInt(t.paddingTop)+parseInt(t.paddingBottom),n=e.clientHeight-i;this.pathwaysMaxHeight=n-150}},mapResize:function(){this.mapImp&&this.mapImp.resize(),this.computePathControlsMaximumHeight()},onFlatmapReady:function(){this.sensor=new Ie(this.$refs.display,this.mapResize),this.mapImp.options&&"functional"===this.mapImp.options.style&&(this.isFC=!0),this.mapImp.setBackgroundOpacity(1),this.backgroundChangeCallback(this.currentBackground),this.pathways=this.mapImp.pathTypes(),this.mapImp.enableCentrelines(!1),this.addResizeButtonToMinimap(),this.loading=!1,this.computePathControlsMaximumHeight(),this.drawerOpen=!0,this.$emit("ready",this)},showMinimap:function(e){this.mapImp&&this.mapImp.showMinimap(e)},showPathwaysDrawer:function(e){this.drawerOpen=e},searchAndShowResult:function(e,t){if(this.mapImp){if(void 0===e||""===e)return this.mapImp.clearSearchResults(),!0;var i=this.mapImp.search(e);if(i&&i.results&&i.results.length>0)return this.mapImp.showSearchResults(i),t&&i.results[0].featureId&&i.results[0].text&&this.mapImp.showPopup(i.results[0].featureId,i.results[0].text,{className:"custom-popup",positionAtLastClick:!1}),!0;this.mapImp.clearSearchResults()}return!1},searchSuggestions:function(e){return this.mapImp?this.mapImp.search(e):[]}},props:{entry:String,biologicalSex:{type:String,default:""},featureInfo:{type:Boolean,default:!1},minZoom:{type:Number,default:4},pathControls:{type:Boolean,default:!0},searchable:{type:Boolean,default:!1},tooltips:{type:Boolean,default:!0},helpMode:{type:Boolean,default:!1},renderAtMounted:{type:Boolean,default:!0},displayMinimap:{type:Boolean,default:!1},displayWarning:{type:Boolean,default:!1},warningMessage:{type:String,default:"Beta feature - This map is based on the connectivity of a rat. New connectivity and species specificity will be added as the SPARC program progress."},isLegacy:{type:Boolean,default:!1},displayLatestChanges:{type:Boolean,default:!1},latestChangesMessage:{type:String,default:"Search now provide suggested terms. Add new legends. New tilesets. New female map. Improve upstream downstream information"},state:{type:Object,default:void 0},flatmapAPI:{type:String,default:"https://mapcore-demo.org/current/flatmap/v3/"},sparcAPI:{type:String,default:"https://api.sparc.science/"}},provide:function(){return{sparcAPI:this.sparcAPI,flatmapAPI:this.flatmapAPI}},data:function(){return{layers:[],pathways:[],sckanDisplay:[{label:"Display Path with SCKAN",key:"VALID"}],centreLines:[{label:"Display Nerves",key:"centrelines"}],pathwaysMaxHeight:1e3,hoverVisibilities:[{value:!1},{value:!1},{value:!1},{value:!1},{value:!1},{value:!1},{value:!1},{value:!1}],isFC:!1,inHelp:!1,currentBackground:"white",availableBackground:["white","lightskyblue","black"],loading:!1,flatmapMarker:Te,drawerOpen:!1,tooltipContent:{featureIds:[]},colourRadio:!0,outlinesRadio:!0,minimapResizeShow:!1,minimapSmall:!1}},watch:{entry:function(){this.state||this.createFlatmap()},helpMode:function(e){this.setHelpMode(e)},state:{handler:function(e){this.setState(e)},immediate:!0,deep:!0}},mounted:function(){var e=i("4979");this.mapManager=new e.MapManager(this.flatmapAPI),this.renderAtMounted&&this.createFlatmap()}},Ee=Pe,Me=(i("8056"),G(Ee,s,a,!1,null,"48cc3512",null)),Ne=Me.exports,Le=function(){var e=this,t=e._self._c;return t("div",{ref:"multiContainer",staticClass:"multi-container"},[t("div",{staticStyle:{position:"absolute","z-index":"10"}},[t("div",{staticClass:"species-display-text"},[e._v(" Species ")]),t("el-popover",{ref:"selectPopover",attrs:{content:"Select a species",placement:"right",appendToBody:!1,trigger:"manual","popper-class":"flatmap-popper right-popper"},model:{value:e.helpMode,callback:function(t){e.helpMode=t},expression:"helpMode"}}),t("el-select",{directives:[{name:"popover",rawName:"v-popover:selectPopover",arg:"selectPopover"}],staticClass:"select-box",attrs:{id:"flatmap-select","popper-append-to-body":e.appendToBody,placeholder:"Select","popper-class":"flatmap_dropdown"},on:{change:e.setSpecies},model:{value:e.activeSpecies,callback:function(t){e.activeSpecies=t},expression:"activeSpecies"}},e._l(e.speciesList,(function(i,n){return t("el-option",{key:n,attrs:{label:n,value:n}},[t("el-row",[t("el-col",{attrs:{span:8}},[t("i",{class:i.iconClass})]),t("el-col",{attrs:{span:12}},[e._v(e._s(n))])],1)],1)})),1)],1),e._l(e.speciesList,(function(i,n){return t("FlatmapVuer",{directives:[{name:"show",rawName:"v-show",value:e.activeSpecies==n,expression:"activeSpecies==key"}],key:n,ref:n,refInFor:!0,staticStyle:{height:"100%"},attrs:{showLayer:e.showLayer,entry:i.taxo,biologicalSex:i.biologicalSex,displayWarning:i.displayWarning,warningMessage:e.warningMessage,displayLatestChanges:i.displayLatestChanges,latestChangesMessage:i.latestChangesMessage,isLegacy:i.isLegacy,featureInfo:e.featureInfo,minZoom:e.minZoom,pathControls:e.pathControls,searchable:e.searchable,helpMode:e.helpMode,renderAtMounted:e.renderAtMounted,displayMinimap:e.displayMinimap,flatmapAPI:e.flatmapAPI,sparcAPI:e.sparcAPI},on:{"view-latest-map":e.viewLatestMap,"resource-selected":e.FlatmapSelected,ready:e.FlatmapReady,"pan-zoom-callback":e.panZoomCallback}})}))],2)},Ae=[],Fe=(i("06f1"),i("6ac9")),ze=i.n(Fe),De=(i("1f1a"),i("4e4b")),Be=i.n(De),Re=(i("6611"),i("e772")),Ve=i.n(Re);i("ea64");V.a.use(B.a),S.a.use(_.a),S.a.use(d.a),S.a.use(Ve.a),S.a.use(Be.a),S.a.use(ze.a);var qe={"NCBITaxon:10114":"01fedbf9-d783-509c-a10c-827941ab13da","NCBITaxon:9823":"a336ac04-24db-561f-a25f-1c994fe17410","NCBITaxon:9606":"42ed6323-f645-5fbe-bada-9581819cf689","NCBITaxon:10090":"25285fab-48a0-5620-a6a0-f9a0374837d5","NCBITaxon:9685":"73060497-46a6-52bf-b975-cac511c127cb"},He={name:"MultiFlatmapVuer",components:{FlatmapVuer:Ne},beforeMount:function(){this._resolveList=[],this._initialised=!1},mounted:function(){var e=this;this.initialise(),Q.$on("onActionClick",(function(t){e.FlatmapSelected(t)}))},methods:{initialise:function(){var e=this;return new Promise((function(t){e.requireInitialisation?(e.requireInitialisation=!1,fetch(e.flatmapAPI).then((function(e){return e.json()})).then((function(i){Object.keys(e.availableSpecies).forEach((function(t){for(var n=0;n<i.length;n++)if(e.availableSpecies[t].taxo===i[n].taxon){if(!e.availableSpecies[t].biologicalSex){e.$set(e.speciesList,t,e.availableSpecies[t]);break}if(i[n].biologicalSex&&i[n].biologicalSex===e.availableSpecies[t].biologicalSex){e.$set(e.speciesList,t,e.availableSpecies[t]);break}}}));var n=e.initial;if(e.state){var o=e.state.state;n=o&&(o.uuid||o.entry)||!e.state.species?void 0:e.state.species}n&&(n&&void 0!==e.speciesList[n]?e.activeSpecies=n:e.activeSpecies=Object.keys(e.speciesList)[0],e.setSpecies(e.activeSpecies,e.state?e.state.state:void 0,5)),e._initialised=!0,t(),e._resolveList.forEach((function(e){e()}))}))):e._initialised?t():e._resolveList.push(t)}))},FlatmapSelected:function(e){this.$emit("resource-selected",e)},FlatmapReady:function(e){this.$emit("ready",e)},getCoordinatesOfLastClick:function(){var e=this.$refs[this.activeSpecies];if(e&&e[0])return e[0].getCoordinatesOfLastClick()},getCurrentFlatmap:function(){return this.$refs[this.activeSpecies][0]},panZoomCallback:function(e){this.$emit("pan-zoom-callback",e)},showPopup:function(e,t,i){var n=this.getCurrentFlatmap();n.showPopup(e,t,i)},showMarkerPopup:function(e,t,i){var n=this.getCurrentFlatmap();n.showMarkerPopup(e,t,i)},setSpecies:function(e,t,i){var n=this;if(this.$refs&&e in this.$refs)this.activeSpecies=e,this.$refs[this.activeSpecies][0].createFlatmap(t),this.$emit("flatmapChanged",this.activeSpecies);else if(i){var o=i-1;o>=0&&S.a.nextTick((function(){n.setSpecies(e,t,o)}))}},viewLatestMap:function(e){for(var t=Object.keys(this.speciesList),i=0;i<t.length;i++){var n=this.speciesList[t[i]];if(!n.isLegacy&&n.taxo===e.entry&&n.biologicalSex===e.biologicalSex)return void this.setSpecies(t[i],e,0)}},createLegacyEntry:function(e,t,i){if(i&&t){var n="Legacy";return e.species&&("Legacy"===e.species.slice(0,6)?n=e.species:n+=" ".concat(e.species)),this.$set(this.speciesList,n,{taxo:t,isLegacy:!0,displayWarning:!0}),{species:n,state:{entry:t,uuid:i,viewport:e.state.viewport,searchTerm:e.state.searchTerm}}}},updateState:function(e){var t=this;return new Promise((function(n){if(e&&e.state){var o=e.state;if(o.uuid){if(o.entry)return new Promise((function(){var r=new(i("4979").MapManager)(t.flatmapAPI),s={taxon:o.entry};o.biologicalSex&&(s["biologicalSex"]=o.biologicalSex),r.findMap_(s).then((function(i){if(i.uuid!==o.uuid)return t.createLegacyEntry(e,o.entry,o.uuid)})).then((function(t){n(t||e)})).catch((function(){n(e)}))}))}else if(o.entry){var r=o.entry in qe?qe[o.entry]:void 0,s=t.createLegacyEntry(e,o.entry,r);n(s||e)}}n(e)}))},getState:function(){var e={species:this.activeSpecies,state:void 0},t=this.getCurrentFlatmap();return e.state=t.getState(),e},setState:function(e){var t=this;e&&this.updateState(e).then((function(e){t.initialise().then((function(){if(e.species&&e.species!==t.activeSpecies)t.setSpecies(e.species,e.state,5);else if(e.state){var i=t.getCurrentFlatmap();i.setState(e.state)}}))}))},resourceSelected:function(e){this.$emit("resource-selected",e)}},props:{showLayer:{type:Boolean,default:!1},featureInfo:{type:Boolean,default:!1},pathControls:{type:Boolean,default:!0},searchable:{type:Boolean,default:!1},initial:{type:String,default:""},minZoom:{type:Number,default:4},renderAtMounted:{type:Boolean,default:!1},helpMode:{type:Boolean,default:!1},displayMinimap:{type:Boolean,default:!1},warningMessage:{type:String,default:"Beta feature - This map is based on the connectivity of a rat. New connectivity and species specificity will be added as the SPARC program progress."},availableSpecies:{type:Object,default:function(){return{"Human Female":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000383",iconClass:"mapicon-icon_human",displayWarning:!0},"Human Male":{taxo:"NCBITaxon:9606",biologicalSex:"PATO:0000384",iconClass:"mapicon-icon_human",displayWarning:!0},Rat:{taxo:"NCBITaxon:10114",iconClass:"mapicon-icon_rat",displayLatestChanges:!0},Mouse:{taxo:"NCBITaxon:10090",iconClass:"mapicon-icon_mouse",displayWarning:!0},Pig:{taxo:"NCBITaxon:9823",iconClass:"mapicon-icon_pig",displayWarning:!0},Cat:{taxo:"NCBITaxon:9685",iconClass:"mapicon-icon_cat",displayWarning:!0}}}},state:{type:Object,default:void 0},flatmapAPI:{type:String,default:"https://mapcore-demo.org/current/flatmap/v3/"},sparcAPI:{type:String,default:"https://api.sparc.science/"}},data:function(){return{activeSpecies:void 0,appendToBody:!1,speciesList:{},requireInitialisation:!0}},watch:{state:{handler:function(e){this.setState(e)},immediate:!0,deep:!0}}},We=He,Ue=(i("ec09"),G(We,Le,Ae,!1,null,"0d8bc999",null)),Ge=Ue.exports},fd22:function(e,t){e.exports=require("core-js/modules/es.string.includes.js")},fe07:function(e,t,i){}})}));
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