@abi-software/flatmapvuer 0.3.6-upstream-downstream → 0.3.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -9027,6 +9027,13 @@ module.exports = require("core-js/modules/es.object.to-string.js");
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  /***/ }),
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+ /***/ "99f8":
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+ /***/ (function(module, exports, __webpack_require__) {
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+
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+ // extracted by mini-css-extract-plugin
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+
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+ /***/ }),
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+
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  /***/ "9b22":
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  /***/ (function(module, exports) {
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@@ -10515,17 +10522,6 @@ var isDefined = exports.isDefined = function isDefined(val) {
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  module.exports = require("css-element-queries/src/ResizeSensor");
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- /***/ }),
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-
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- /***/ "b2d3":
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- /***/ (function(module, __webpack_exports__, __webpack_require__) {
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-
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- "use strict";
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- /* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_b8a1a320_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("f37d");
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- /* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_b8a1a320_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_b8a1a320_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0__);
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- /* unused harmony reexport * */
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-
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-
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  /***/ }),
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  /***/ "b2d6":
@@ -11184,6 +11180,17 @@ module.exports = require("core-js/modules/es.regexp.exec.js");
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  module.exports = require("core-js/modules/es.array.concat.js");
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+ /***/ }),
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+
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+ /***/ "d006":
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+ /***/ (function(module, __webpack_exports__, __webpack_require__) {
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+
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+ "use strict";
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+ /* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_1e355414_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0__ = __webpack_require__("99f8");
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+ /* harmony import */ var _node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_1e355414_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0___default = /*#__PURE__*/__webpack_require__.n(_node_modules_mini_css_extract_plugin_dist_loader_js_ref_8_oneOf_1_0_node_modules_css_loader_dist_cjs_js_ref_8_oneOf_1_1_node_modules_vue_loader_lib_loaders_stylePostLoader_js_node_modules_postcss_loader_src_index_js_ref_8_oneOf_1_2_node_modules_sass_loader_dist_cjs_js_ref_8_oneOf_1_3_node_modules_cache_loader_dist_cjs_js_ref_0_0_node_modules_vue_loader_lib_index_js_vue_loader_options_Tooltip_vue_vue_type_style_index_0_id_1e355414_scoped_true_lang_scss___WEBPACK_IMPORTED_MODULE_0__);
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+ /* unused harmony reexport * */
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+
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+
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  /***/ }),
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  /***/ "d010":
@@ -13174,13 +13181,6 @@ exports.default = {
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  /***/ }),
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- /***/ "f37d":
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- /***/ (function(module, exports, __webpack_require__) {
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-
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- // extracted by mini-css-extract-plugin
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-
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- /***/ }),
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-
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  /***/ "f3ad":
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  /***/ (function(module, exports, __webpack_require__) {
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@@ -14730,7 +14730,7 @@ if (typeof window !== 'undefined') {
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  // Indicate to webpack that this file can be concatenated
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  /* harmony default export */ var setPublicPath = (null);
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- // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"f96242d6-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/FlatmapVuer.vue?vue&type=template&id=b0476142&scoped=true&
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+ // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"e512028c-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/FlatmapVuer.vue?vue&type=template&id=b0476142&scoped=true&
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  var render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"flatmap-container",attrs:{"element-loading-text":"Loading...","element-loading-spinner":"el-icon-loading","element-loading-background":"rgba(0, 0, 0, 0.3)"}},[_c('map-svg-sprite-color'),_c('div',{staticStyle:{"height":"100%","width":"100%","position":"relative","overflow-y":"none"}},[_c('div',{ref:"display",staticStyle:{"height":"100%","width":"100%"}}),_c('div',{staticClass:"beta-popovers"},[_c('div',[_c('el-popover',{ref:"warningPopover",attrs:{"content":_vm.warningMessage,"placement":"right","appendToBody":false,"trigger":"manual","popper-class":"warning-popper flatmap-popper right-popper"},model:{value:(_vm.hoverVisibilities[6].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[6], "value", $$v)},expression:"hoverVisibilities[6].value"}}),(_vm.displayWarning && _vm.warningMessage)?_c('i',{directives:[{name:"popover",rawName:"v-popover:warningPopover",arg:"warningPopover"}],staticClass:"el-icon-warning warning-icon",on:{"mouseover":function($event){return _vm.showToolitip(6)},"mouseout":function($event){return _vm.hideToolitip(6)}}},[_c('span',{staticClass:"warning-text"},[_vm._v("Beta")])]):_vm._e()],1),(_vm.displayLatestChanges)?_c('el-popover',{ref:"latestChangesPopover",attrs:{"content":_vm.latestChangesMessage,"placement":"right","appendToBody":false,"trigger":"manual","popper-class":"warning-popper flatmap-popper right-popper"},model:{value:(_vm.hoverVisibilities[7].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[7], "value", $$v)},expression:"hoverVisibilities[7].value"}}):_vm._e(),(_vm.displayLatestChanges && _vm.latestChangesMessage)?_c('i',{directives:[{name:"popover",rawName:"v-popover:latestChangesPopover",arg:"latestChangesPopover"}],staticClass:"el-icon-warning latest-changesicon",on:{"mouseover":function($event){return _vm.showToolitip(7)},"mouseout":function($event){return _vm.hideToolitip(7)}}},[_c('span',{staticClass:"warning-text"},[_vm._v("What's new?")])]):_vm._e()],1),_c('div',{staticClass:"bottom-right-control"},[_c('el-popover',{attrs:{"content":"Zoom in","placement":"left","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper left-popper"},model:{value:(_vm.hoverVisibilities[0].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[0], "value", $$v)},expression:"hoverVisibilities[0].value"}},[_c('map-svg-icon',{staticClass:"icon-button zoomIn",attrs:{"slot":"reference","icon":"zoomIn"},nativeOn:{"click":function($event){return _vm.zoomIn()},"mouseover":function($event){return _vm.showToolitip(0)},"mouseout":function($event){return _vm.hideToolitip(0)}},slot:"reference"})],1),_c('el-popover',{attrs:{"content":"Zoom out","placement":"top-end","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper popper-zoomout"},model:{value:(_vm.hoverVisibilities[1].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[1], "value", $$v)},expression:"hoverVisibilities[1].value"}},[_c('map-svg-icon',{staticClass:"icon-button zoomOut",attrs:{"slot":"reference","icon":"zoomOut"},nativeOn:{"click":function($event){return _vm.zoomOut()},"mouseover":function($event){return _vm.showToolitip(1)},"mouseout":function($event){return _vm.hideToolitip(1)}},slot:"reference"})],1),_c('el-popover',{attrs:{"content":"Reset","placement":"top","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper"},model:{value:(_vm.hoverVisibilities[2].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[2], "value", $$v)},expression:"hoverVisibilities[2].value"}},[_c('div',[_vm._v(" Fit to "),_c('br'),_vm._v(" window ")]),_c('map-svg-icon',{staticClass:"icon-button fitWindow",attrs:{"slot":"reference","icon":"fitWindow"},nativeOn:{"click":function($event){return _vm.resetView()},"mouseover":function($event){return _vm.showToolitip(2)},"mouseout":function($event){return _vm.hideToolitip(2)}},slot:"reference"})],1)],1),_c('el-popover',{ref:"checkBoxPopover",attrs:{"content":"Change pathway visibility","placement":"right","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper right-popper"},model:{value:(_vm.hoverVisibilities[4].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[4], "value", $$v)},expression:"hoverVisibilities[4].value"}}),_c('div',{staticClass:"pathway-location",class:{ open: _vm.drawerOpen, close: !_vm.drawerOpen }},[(_vm.pathways.length > 0 && _vm.pathControls)?_c('div',{directives:[{name:"popover",rawName:"v-popover:checkBoxPopover",arg:"checkBoxPopover"}],staticClass:"pathway-container"},[_c('el-popover',{ref:"markerPopover",attrs:{"content":"Find these markers for data","placement":"right","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper popper-bump-right right-popper"},model:{value:(_vm.hoverVisibilities[5].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[5], "value", $$v)},expression:"hoverVisibilities[5].value"}}),_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.hoverVisibilities[5].value),expression:"hoverVisibilities[5].value"},{name:"popover",rawName:"v-popover:markerPopover",arg:"markerPopover"}],staticClass:"flatmap-marker-help",domProps:{"innerHTML":_vm._s(_vm.flatmapMarker)}}),_c('el-row',[_c('el-col',{attrs:{"span":12}},[_c('div',{staticClass:"pathways-display-text"},[_vm._v("Pathways")])]),_c('el-col',{attrs:{"span":12}},[_c('el-checkbox',{staticClass:"all-checkbox",attrs:{"indeterminate":_vm.isIndeterminate},on:{"change":_vm.handleCheckAllChange},model:{value:(_vm.checkAll),callback:function ($$v) {_vm.checkAll=$$v},expression:"checkAll"}},[_vm._v("Display all")])],1)],1),_c('el-checkbox-group',{staticClass:"checkbox-group",attrs:{"size":"small"},on:{"change":_vm.handleCheckedItemsChange},model:{value:(_vm.checkedItems),callback:function ($$v) {_vm.checkedItems=$$v},expression:"checkedItems"}},[_c('div',{staticClass:"checkbox-group-inner"},_vm._l((_vm.pathways),function(item){return _c('el-row',{key:item.type,attrs:{"label":item.type}},[_c('div',{staticClass:"checkbox-container"},[_c('el-checkbox',{staticClass:"my-checkbox",attrs:{"label":item.type,"checked":true},on:{"change":function($event){return _vm.visibilityToggle()}}},[_c('div',{staticClass:"path-visual",class:item.type}),_vm._v(" "+_vm._s(item.label)+" ")])],1)])}),1)])],1):_vm._e(),_c('div',{staticClass:"drawer-button",class:{ open: _vm.drawerOpen, close: !_vm.drawerOpen },on:{"click":_vm.toggleDrawer}},[_c('i',{staticClass:"el-icon-arrow-left"})])]),_c('el-popover',{ref:"backgroundPopover",attrs:{"placement":"top-start","width":"175","appendToBody":false,"trigger":"click","popper-class":"background-popper"}},[_c('el-row',{staticClass:"backgroundText"},[_vm._v("Organs display")]),_c('el-row',{staticClass:"backgroundControl"},[_c('el-radio-group',{staticClass:"flatmap-radio",on:{"change":_vm.setColour},model:{value:(_vm.colourRadio),callback:function ($$v) {_vm.colourRadio=$$v},expression:"colourRadio"}},[_c('el-radio',{attrs:{"label":true}},[_vm._v("Colour")]),_c('el-radio',{attrs:{"label":false}},[_vm._v("Greyscale")])],1)],1),_c('el-row',{staticClass:"backgroundSpacer"}),_c('el-row',{staticClass:"backgroundText"},[_vm._v("Outlines display")]),_c('el-row',{staticClass:"backgroundControl"},[_c('el-radio-group',{staticClass:"flatmap-radio",on:{"change":_vm.setOutlines},model:{value:(_vm.outlinesRadio),callback:function ($$v) {_vm.outlinesRadio=$$v},expression:"outlinesRadio"}},[_c('el-radio',{attrs:{"label":true}},[_vm._v("Show")]),_c('el-radio',{attrs:{"label":false}},[_vm._v("Hide")])],1)],1),_c('el-row',{staticClass:"backgroundSpacer"}),_c('el-row',{staticClass:"backgroundText"},[_vm._v("Change background")]),_c('el-row',{staticClass:"backgroundControl"},_vm._l((_vm.availableBackground),function(item){return _c('div',{key:item,class:['backgroundChoice', item, item == _vm.currentBackground ? 'active' :''],on:{"click":function($event){return _vm.backgroundChangeCallback(item)}}})}),0)],1),_c('el-popover',{attrs:{"content":"Change background color","placement":"right","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper right-popper"},model:{value:(_vm.hoverVisibilities[3].value),callback:function ($$v) {_vm.$set(_vm.hoverVisibilities[3], "value", $$v)},expression:"hoverVisibilities[3].value"}},[_c('map-svg-icon',{directives:[{name:"popover",rawName:"v-popover:backgroundPopover",arg:"backgroundPopover"}],staticClass:"icon-button background-colour",class:{ open: _vm.drawerOpen, close: !_vm.drawerOpen },attrs:{"slot":"reference","icon":"changeBckgd"},nativeOn:{"mouseover":function($event){return _vm.showToolitip(3)},"mouseout":function($event){return _vm.hideToolitip(3)}},slot:"reference"})],1),_c('Tooltip',{ref:"tooltip",staticClass:"tooltip",attrs:{"content":_vm.tooltipContent},on:{"resource-selected":_vm.resourceSelected}})],1)],1)}
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  var staticRenderFns = []
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@@ -14940,12 +14940,12 @@ var es_number_constructor_js_ = __webpack_require__("f989");
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  var external_vue_ = __webpack_require__("8bbf");
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  var external_vue_default = /*#__PURE__*/__webpack_require__.n(external_vue_);
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- // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"f96242d6-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Tooltip.vue?vue&type=template&id=b8a1a320&scoped=true&
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- var Tooltipvue_type_template_id_b8a1a320_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"tooltip-container"},[(_vm.content)?_c('el-main',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"main"},[(_vm.content.title)?_c('div',{staticClass:"block"},[_c('span',{staticClass:"title"},[_vm._v(_vm._s(_vm.capitalise(_vm.content.title)))])]):_c('div',{staticClass:"block"},[_c('span',{staticClass:"title"},[_vm._v(_vm._s(_vm.content.featureId))])]),_c('div',{staticClass:"content-container scrollbar"},[(_vm.content.featureIds)?_c('pubmed-viewer',{directives:[{name:"show",rawName:"v-show",value:(false),expression:"false"}],staticClass:"block",attrs:{"entry":_vm.content},on:{"pubmedSearchUrl":_vm.pubmedSearchUrlUpdate}}):_vm._e(),_vm._v(" "+_vm._s(_vm.content.paths)+" "),(this.origins)?_c('div',{staticClass:"block"},[_c('div',[_c('span',{staticClass:"attribute-title"},[_vm._v("Origin")]),_c('el-popover',{attrs:{"width":"250","trigger":"hover","append-to-body":false,"popper-class":"popover-origin-help"}},[_c('i',{staticClass:"el-icon-warning-outline info",attrs:{"slot":"reference"},slot:"reference"}),_c('span',{staticStyle:{"word-break":"keep-all"}},[_c('i',[_vm._v("Origin")]),_vm._v(" "+_vm._s(_vm.originDescription)+" ")])])],1),_vm._l((_vm.origins),function(origin){return _c('div',{key:origin,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(origin))+" "),_c('div',{staticClass:"seperator"})])}),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.originsWithDatasets.length > 0),expression:"originsWithDatasets.length > 0"}],staticClass:"button",on:{"click":_vm.openDendrites}},[_vm._v(" Explore origin data ")])],2):_vm._e(),(this.components)?_c('div',{staticClass:"block"},[_c('div',{staticClass:"attribute-title"},[_vm._v("Components")]),_vm._l((_vm.components),function(component){return _c('div',{key:component,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(component))+" "),_c('div',{staticClass:"seperator"})])})],2):_vm._e(),(this.destinations)?_c('div',{staticClass:"block"},[_c('div',[_c('span',{staticClass:"attribute-title"},[_vm._v("Destination")]),_c('el-popover',{attrs:{"width":"250","trigger":"hover","append-to-body":false,"popper-class":"popover-origin-help"}},[_c('i',{staticClass:"el-icon-warning-outline info",attrs:{"slot":"reference"},slot:"reference"}),_c('span',{staticStyle:{"word-break":"keep-all"}},[_c('i',[_vm._v("Destination")]),_vm._v(" is where the axons terminate ")])])],1),_vm._l((_vm.destinations),function(destination){return _c('div',{key:destination,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(destination))+" "),_c('div',{staticClass:"seperator"})])}),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.destinationsWithDatasets.length > 0),expression:"destinationsWithDatasets.length > 0"}],staticClass:"button",on:{"click":_vm.openAxons}},[_vm._v(" Explore destination data ")])],2):_vm._e(),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.components.length > 0),expression:"components.length > 0"}],staticClass:"button",on:{"click":_vm.openAll}},[_vm._v(" Search for data on components ")]),(_vm.pubmedSearchUrl)?_c('el-button',{staticClass:"button",attrs:{"icon":"el-icon-notebook-2"},on:{"click":function($event){return _vm.openUrl(_vm.pubmedSearchUrl)}}},[_vm._v(" Open publications in pubmed ")]):_vm._e()],1)]):_vm._e()],1)}
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- var Tooltipvue_type_template_id_b8a1a320_scoped_true_staticRenderFns = []
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+ // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"e512028c-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/Tooltip.vue?vue&type=template&id=1e355414&scoped=true&
14944
+ var Tooltipvue_type_template_id_1e355414_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"tooltip-container"},[(_vm.content)?_c('el-main',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"main"},[(_vm.content.title)?_c('div',{staticClass:"block"},[_c('span',{staticClass:"title"},[_vm._v(_vm._s(_vm.capitalise(_vm.content.title)))])]):_c('div',{staticClass:"block"},[_c('span',{staticClass:"title"},[_vm._v(_vm._s(_vm.content.featureId))])]),_c('div',{staticClass:"content-container scrollbar"},[(_vm.content.featureIds)?_c('pubmed-viewer',{directives:[{name:"show",rawName:"v-show",value:(false),expression:"false"}],staticClass:"block",attrs:{"entry":_vm.content},on:{"pubmedSearchUrl":_vm.pubmedSearchUrlUpdate}}):_vm._e(),_vm._v(" "+_vm._s(_vm.content.paths)+" "),(this.origins)?_c('div',{staticClass:"block"},[_c('div',[_c('span',{staticClass:"attribute-title"},[_vm._v("Origin")]),_c('el-popover',{attrs:{"width":"250","trigger":"hover","append-to-body":false,"popper-class":"popover-origin-help"}},[_c('i',{staticClass:"el-icon-warning-outline info",attrs:{"slot":"reference"},slot:"reference"}),_c('span',{staticStyle:{"word-break":"keep-all"}},[_c('i',[_vm._v("Origin")]),_vm._v(" "+_vm._s(_vm.originDescription)+" ")])])],1),_vm._l((_vm.origins),function(origin){return _c('div',{key:origin,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(origin))+" ")])}),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.originsWithDatasets.length > 0),expression:"originsWithDatasets.length > 0"}],staticClass:"button",on:{"click":_vm.openDendrites}},[_vm._v(" Explore origin data ")])],2):_vm._e(),(this.components)?_c('div',{staticClass:"block"},[_c('div',{staticClass:"attribute-title"},[_vm._v("Components")]),_vm._l((_vm.components),function(component){return _c('div',{key:component,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(component))+" ")])})],2):_vm._e(),(this.destinations)?_c('div',{staticClass:"block"},[_c('div',[_c('span',{staticClass:"attribute-title"},[_vm._v("Destination")]),_c('el-popover',{attrs:{"width":"250","trigger":"hover","append-to-body":false,"popper-class":"popover-origin-help"}},[_c('i',{staticClass:"el-icon-warning-outline info",attrs:{"slot":"reference"},slot:"reference"}),_c('span',{staticStyle:{"word-break":"keep-all"}},[_c('i',[_vm._v("Destination")]),_vm._v(" is where the axons terminate ")])])],1),_vm._l((_vm.destinations),function(destination){return _c('div',{key:destination,staticClass:"attribute-content"},[_vm._v(" "+_vm._s(_vm.capitalise(destination))+" ")])}),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.destinationsWithDatasets.length > 0),expression:"destinationsWithDatasets.length > 0"}],staticClass:"button",on:{"click":_vm.openAxons}},[_vm._v(" Explore destination data ")])],2):_vm._e(),_c('el-button',{directives:[{name:"show",rawName:"v-show",value:(_vm.components.length > 0),expression:"components.length > 0"}],staticClass:"button",on:{"click":_vm.openAll}},[_vm._v(" Search for data on components ")]),(_vm.pubmedSearchUrl)?_c('el-button',{staticClass:"button",attrs:{"icon":"el-icon-notebook-2"},on:{"click":function($event){return _vm.openUrl(_vm.pubmedSearchUrl)}}},[_vm._v(" Open publications in pubmed ")]):_vm._e()],1)]):_vm._e()],1)}
14945
+ var Tooltipvue_type_template_id_1e355414_scoped_true_staticRenderFns = []
14946
14946
 
14947
14947
 
14948
- // CONCATENATED MODULE: ./src/components/Tooltip.vue?vue&type=template&id=b8a1a320&scoped=true&
14948
+ // CONCATENATED MODULE: ./src/components/Tooltip.vue?vue&type=template&id=1e355414&scoped=true&
14949
14949
 
14950
14950
  // CONCATENATED MODULE: ./node_modules/@babel/runtime/helpers/esm/arrayWithoutHoles.js
14951
14951
 
@@ -15034,7 +15034,7 @@ var en_default = /*#__PURE__*/__webpack_require__.n(en);
15034
15034
  var locale = __webpack_require__("4897");
15035
15035
  var locale_default = /*#__PURE__*/__webpack_require__.n(locale);
15036
15036
 
15037
- // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"f96242d6-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/PubmedViewer.vue?vue&type=template&id=1d12a6d3&scoped=true&
15037
+ // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"e512028c-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/PubmedViewer.vue?vue&type=template&id=1d12a6d3&scoped=true&
15038
15038
  var PubmedViewervue_type_template_id_1d12a6d3_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"pubmed-container"},[_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading.response),expression:"loading.response"}],staticClass:"block"},[_c('div',{staticClass:"attribute-title"},[_vm._v("Pubmed Resources")]),_c('br'),_c('el-carousel',{attrs:{"autoplay":false,"indicator-position":"outside","height":"250px","width":"200px"}},_vm._l((_vm.pubmeds),function(pub,i){return _c('el-carousel-item',{key:i},[_c('div',{staticClass:"attribute-content"},[_c('div',{domProps:{"innerHTML":_vm._s(pub.html)}}),_c('el-link',{staticClass:"el-link",attrs:{"href":pub.url,"underline":false,"target":"_blank"}},[_vm._v(_vm._s(pub.url))])],1)])}),1)],1)])}
15039
15039
  var PubmedViewervue_type_template_id_1d12a6d3_scoped_true_staticRenderFns = []
15040
15040
 
@@ -15550,9 +15550,6 @@ var EventBus = new external_vue_default.a();
15550
15550
  //
15551
15551
  //
15552
15552
  //
15553
- //
15554
- //
15555
- //
15556
15553
 
15557
15554
  /* eslint-disable no-alert, no-console */
15558
15555
 
@@ -15574,12 +15571,6 @@ var _titleCase = function titleCase(str) {
15574
15571
  });
15575
15572
  };
15576
15573
 
15577
- var inArray = function inArray(ar1, ar2) {
15578
- var as1 = JSON.stringify(ar1);
15579
- var as2 = JSON.stringify(ar2);
15580
- return as1.indexOf(as2) !== -1;
15581
- };
15582
-
15583
15574
  var _capitalise = function capitalise(str) {
15584
15575
  if (str) return str.charAt(0).toUpperCase() + str.slice(1);
15585
15576
  return "";
@@ -15683,38 +15674,6 @@ var _capitalise = function capitalise(str) {
15683
15674
  pubmedSearchUrlUpdate: function pubmedSearchUrlUpdate(val) {
15684
15675
  this.pubmedSearchUrl = val;
15685
15676
  },
15686
- findAllIdsFromConnectivity: function findAllIdsFromConnectivity(connectivity) {
15687
- var dnodes = connectivity.connectivity.flat(); // get nodes from edgelist
15688
-
15689
- var nodes = _toConsumableArray(new Set(dnodes)); // remove duplicates
15690
-
15691
-
15692
- var found = [];
15693
- nodes.forEach(function (n) {
15694
- if (Array.isArray(n)) {
15695
- found.push(n.flat());
15696
- } else {
15697
- found.push(n);
15698
- }
15699
- });
15700
- return _toConsumableArray(new Set(found.flat()));
15701
- },
15702
- flattenConntectivity: function flattenConntectivity(connectivity) {
15703
- var dnodes = connectivity.flat(); // get nodes from edgelist
15704
-
15705
- var nodes = _toConsumableArray(new Set(dnodes)); // remove duplicates
15706
-
15707
-
15708
- var found = [];
15709
- nodes.forEach(function (n) {
15710
- if (Array.isArray(n)) {
15711
- found.push(n.flat());
15712
- } else {
15713
- found.push(n);
15714
- }
15715
- });
15716
- return found.flat();
15717
- },
15718
15677
  findComponents: function findComponents(connectivity) {
15719
15678
  var dnodes = connectivity.connectivity.flat(); // get nodes from edgelist
15720
15679
 
@@ -15724,21 +15683,30 @@ var _capitalise = function capitalise(str) {
15724
15683
  var found = [];
15725
15684
  var terminal = false;
15726
15685
  nodes.forEach(function (node) {
15686
+ var n = node.flat(); // Find all terms on the node
15687
+
15727
15688
  terminal = false; // Check if the node is an destination or origin (note that they are labelled dendrite and axon as opposed to origin and destination)
15728
15689
 
15729
- if (inArray(connectivity.axons, node)) {
15730
- terminal = true;
15731
- }
15690
+ n.forEach(function (s) {
15691
+ if (connectivity.axons.includes(s)) {
15692
+ terminal = true;
15693
+ }
15732
15694
 
15733
- if (inArray(connectivity.dendrites, node)) {
15734
- terminal = true;
15735
- }
15695
+ if (connectivity.dendrites.includes(s)) {
15696
+ terminal = true;
15697
+ }
15698
+ });
15736
15699
 
15737
15700
  if (!terminal) {
15738
15701
  found.push(node);
15739
15702
  }
15740
- });
15741
- return found;
15703
+ }); // remove duplicates
15704
+
15705
+ var foundUnique = _toConsumableArray(new Set(found.map(function (n) {
15706
+ return n[0];
15707
+ })));
15708
+
15709
+ return foundUnique;
15742
15710
  },
15743
15711
  getOrganCuries: function getOrganCuries() {
15744
15712
  var _this = this;
@@ -15805,36 +15773,8 @@ var _capitalise = function capitalise(str) {
15805
15773
  });
15806
15774
  });
15807
15775
  },
15808
- createComponentsLabelList: function createComponentsLabelList(components, lookUp) {
15809
- var _this3 = this;
15810
-
15811
- var labelList = [];
15812
- components.forEach(function (n) {
15813
- labelList.push(_this3.createLabelFromNeuralNode(n[0]), lookUp);
15814
-
15815
- if (n.length === 2) {
15816
- labelList.push(_this3.createLabelFromNeuralNode(n[1]), lookUp);
15817
- }
15818
- });
15819
- return labelList;
15820
- },
15821
- createLabelFromNeuralNode: function createLabelFromNeuralNode(node, lookUp) {
15822
- var label = lookUp[node[0]];
15823
-
15824
- if (node.length === 2 && node[1].length > 0) {
15825
- node[1].forEach(function (n) {
15826
- if (lookUp[n] == undefined) {
15827
- label += ", ".concat(n);
15828
- } else {
15829
- label += ", ".concat(lookUp[n]);
15830
- }
15831
- });
15832
- }
15833
-
15834
- return label;
15835
- },
15836
15776
  pathwayQuery: function pathwayQuery(keastIds) {
15837
- var _this4 = this;
15777
+ var _this3 = this;
15838
15778
 
15839
15779
  this.destinations = [];
15840
15780
  this.origins = [];
@@ -15853,47 +15793,36 @@ var _capitalise = function capitalise(str) {
15853
15793
  }).then(function (response) {
15854
15794
  return response.json();
15855
15795
  }).then(function (data) {
15856
- var connectivity = JSON.parse(data.values[0][0]); // Filter the origin and destinations from components
15857
-
15858
- var components = _this4.findComponents(connectivity); // process the nodes for finding datasets
15859
-
15860
-
15861
- var componentsFlat = _this4.flattenConntectivity(components);
15862
-
15863
- var axons = connectivity.axons;
15864
- var dendrites = connectivity.dendrites;
15865
-
15866
- var axonsFlat = _this4.flattenConntectivity(axons);
15796
+ var connectivity = JSON.parse(data.values[0][0]);
15867
15797
 
15868
- var dendritesFlat = _this4.flattenConntectivity(dendrites);
15798
+ var components = _this3.findComponents(connectivity); // Create list of ids to get labels for
15869
15799
 
15870
- var conIds = _this4.findAllIdsFromConnectivity(connectivity); // Create list of ids to get labels for
15871
- // Create readable labels from the nodes. Setting this to 'this.origins' updates the display
15872
15800
 
15801
+ var conIds = connectivity.axons.concat(connectivity.dendrites.concat(components));
15873
15802
 
15874
- _this4.createLabelLookup(conIds).then(function (lookUp) {
15875
- _this4.destinations = axons.map(function (a) {
15876
- return _this4.createLabelFromNeuralNode(a, lookUp);
15803
+ _this3.createLabelLookup(conIds).then(function (lookUp) {
15804
+ _this3.destinations = connectivity.axons.map(function (a) {
15805
+ return lookUp[a];
15877
15806
  });
15878
- _this4.origins = dendrites.map(function (d) {
15879
- return _this4.createLabelFromNeuralNode(d, lookUp);
15807
+ _this3.origins = connectivity.dendrites.map(function (d) {
15808
+ return lookUp[d];
15880
15809
  });
15881
- _this4.components = components.map(function (c) {
15882
- return _this4.createLabelFromNeuralNode(c, lookUp);
15810
+ _this3.components = components.map(function (c) {
15811
+ return lookUp[c];
15883
15812
  });
15884
15813
  }); // Filter for the anatomy which is annotated on datasets
15885
15814
 
15886
15815
 
15887
- _this4.destinationsWithDatasets = _this4.uberons.filter(function (ub) {
15888
- return axonsFlat.indexOf(ub.id) !== -1;
15816
+ _this3.destinationsWithDatasets = _this3.uberons.filter(function (ub) {
15817
+ return connectivity.axons.indexOf(ub.id) !== -1;
15889
15818
  });
15890
- _this4.originsWithDatasets = _this4.uberons.filter(function (ub) {
15891
- return dendritesFlat.indexOf(ub.id) !== -1;
15819
+ _this3.originsWithDatasets = _this3.uberons.filter(function (ub) {
15820
+ return connectivity.dendrites.indexOf(ub.id) !== -1;
15892
15821
  });
15893
- _this4.componentsWithDatasets = _this4.uberons.filter(function (ub) {
15894
- return componentsFlat.indexOf(ub.id) !== -1;
15822
+ _this3.componentsWithDatasets = _this3.uberons.filter(function (ub) {
15823
+ return connectivity.dendrites.indexOf(ub.id) !== -1;
15895
15824
  });
15896
- _this4.loading = false;
15825
+ _this3.loading = false;
15897
15826
  }).catch(function (error) {
15898
15827
  console.error('Error:', error);
15899
15828
  });
@@ -15902,8 +15831,8 @@ var _capitalise = function capitalise(str) {
15902
15831
  });
15903
15832
  // CONCATENATED MODULE: ./src/components/Tooltip.vue?vue&type=script&lang=js&
15904
15833
  /* harmony default export */ var components_Tooltipvue_type_script_lang_js_ = (Tooltipvue_type_script_lang_js_);
15905
- // EXTERNAL MODULE: ./src/components/Tooltip.vue?vue&type=style&index=0&id=b8a1a320&scoped=true&lang=scss&
15906
- var Tooltipvue_type_style_index_0_id_b8a1a320_scoped_true_lang_scss_ = __webpack_require__("b2d3");
15834
+ // EXTERNAL MODULE: ./src/components/Tooltip.vue?vue&type=style&index=0&id=1e355414&scoped=true&lang=scss&
15835
+ var Tooltipvue_type_style_index_0_id_1e355414_scoped_true_lang_scss_ = __webpack_require__("d006");
15907
15836
 
15908
15837
  // CONCATENATED MODULE: ./src/components/Tooltip.vue
15909
15838
 
@@ -15916,11 +15845,11 @@ var Tooltipvue_type_style_index_0_id_b8a1a320_scoped_true_lang_scss_ = __webpack
15916
15845
 
15917
15846
  var Tooltip_component = normalizeComponent(
15918
15847
  components_Tooltipvue_type_script_lang_js_,
15919
- Tooltipvue_type_template_id_b8a1a320_scoped_true_render,
15920
- Tooltipvue_type_template_id_b8a1a320_scoped_true_staticRenderFns,
15848
+ Tooltipvue_type_template_id_1e355414_scoped_true_render,
15849
+ Tooltipvue_type_template_id_1e355414_scoped_true_staticRenderFns,
15921
15850
  false,
15922
15851
  null,
15923
- "b8a1a320",
15852
+ "1e355414",
15924
15853
  null
15925
15854
 
15926
15855
  )
@@ -16810,7 +16739,7 @@ var FlatmapVuer_component = normalizeComponent(
16810
16739
  )
16811
16740
 
16812
16741
  /* harmony default export */ var FlatmapVuer = (FlatmapVuer_component.exports);
16813
- // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"f96242d6-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/MultiFlatmapVuer.vue?vue&type=template&id=61ad0a54&scoped=true&
16742
+ // CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"e512028c-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/MultiFlatmapVuer.vue?vue&type=template&id=61ad0a54&scoped=true&
16814
16743
  var MultiFlatmapVuervue_type_template_id_61ad0a54_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"multi-container"},[_c('div',{staticStyle:{"position":"absolute","z-index":"10"}},[_c('div',{staticClass:"species-display-text"},[_vm._v(" Species ")]),_c('el-popover',{ref:"selectPopover",attrs:{"content":"Select a species","placement":"right","appendToBody":false,"trigger":"manual","popper-class":"flatmap-popper right-popper"},model:{value:(_vm.helpMode),callback:function ($$v) {_vm.helpMode=$$v},expression:"helpMode"}}),_c('el-select',{directives:[{name:"popover",rawName:"v-popover:selectPopover",arg:"selectPopover"}],staticClass:"select-box",attrs:{"id":"flatmap-select","popper-append-to-body":_vm.appendToBody,"placeholder":"Select","popper-class":"flatmap_dropdown"},on:{"change":_vm.flatmapChanged},model:{value:(_vm.activeSpecies),callback:function ($$v) {_vm.activeSpecies=$$v},expression:"activeSpecies"}},_vm._l((_vm.speciesList),function(item,key){return _c('el-option',{key:key,attrs:{"label":key,"value":key}},[_c('el-row',[_c('el-col',{attrs:{"span":8}},[_c('i',{class:item.iconClass})]),_c('el-col',{attrs:{"span":12}},[_vm._v(_vm._s(key))])],1)],1)}),1)],1),_vm._l((_vm.speciesList),function(item,key){return _c('FlatmapVuer',{directives:[{name:"show",rawName:"v-show",value:(_vm.activeSpecies==key),expression:"activeSpecies==key"}],key:key,ref:key,refInFor:true,staticStyle:{"height":"100%"},attrs:{"showLayer":_vm.showLayer,"entry":item.taxo,"displayWarning":item.displayWarning,"warningMessage":_vm.warningMessage,"displayLatestChanges":item.displayLatestChanges,"latestChangesMessage":item.latestChangesMessage,"featureInfo":_vm.featureInfo,"minZoom":_vm.minZoom,"pathControls":_vm.pathControls,"searchable":_vm.searchable,"helpMode":_vm.helpMode,"renderAtMounted":_vm.renderAtMounted,"displayMinimap":_vm.displayMinimap,"flatmapAPI":_vm.flatmapAPI,"sparcAPI":_vm.sparcAPI},on:{"resource-selected":_vm.FlatmapSelected,"ready":_vm.FlatmapReady,"pan-zoom-callback":_vm.panZoomCallback}})})],2)}
16815
16744
  var MultiFlatmapVuervue_type_template_id_61ad0a54_scoped_true_staticRenderFns = []
16816
16745