@abasb75/dicom-parser 0.0.4-test → 0.0.6-test

package/Dataset.d.ts

@@ -1,35 +1,52 @@
-import { Tags } from "./types";
+import { DicomDate, DicomPatientModule, DicomPixelModule, DicomTime, DicomVOILutModule, Tags } from "./types";
 declare class Dataset {
     tags: Tags;
     transferSyntaxUID: string;
     dataView: DataView;
     studyInstanceUID: string;
     studyID: string;
-    numberOfFrames: number | undefined;
-    windowWidth: number | string | undefined;
-    windowCenter: number | string | undefined;
     seriesInstanceUID: string;
     seriesNumber: number | string | undefined;
-    studyDate: string;
-    studyTime: number | string | undefined;
+    studyDate: string | DicomDate;
+    studyTime: number | DicomTime | string | undefined;
     pixelRepresentation: number | string | undefined;
     littleEndian: boolean;
     pixeSpacing: number | number[] | string | undefined;
     accessionNumber: string;
     bitsAllocated: number | string | undefined;
+    bitsStored: number | string | undefined;
+    highBit: number | string | undefined;
     imageType: number | string | number[] | string[] | undefined;
     modality: number | string | number[] | string[] | undefined;
     seriesDescription: string;
     rows: string | number | undefined;
     columns: string | number | undefined;
     patientSex: any;
-    patientAge: string;
+    /** modules */
+    voiLUTModule: DicomVOILutModule;
+    patientModule: DicomPatientModule;
+    pixelModule: DicomPixelModule;
     constructor(tags: Tags, dataView: DataView, littleEndian: boolean);
+    getPixelData(): import("./types").PixelArray[];
+    getVOILutModule(): DicomVOILutModule;
+    getPatientModule(): DicomPatientModule;
+    getPixelModule(): DicomPixelModule;
+    date(group: number, element: number): string | {
+        year: string;
+        month: string;
+        day: string;
+    };
+    time(group: number, element: number): string | {
+        hour: string;
+        minute: string;
+        second: string;
+    };
     int(group: number, element: number): number | undefined;
     get(group: number, element: number): string;
     string(group: number, element: number): string;
-    getValue(element: number | string, elementId?: number | string, vr?: string): string | number | (string | number)[] | undefined;
+    getValue(element: number | string, elementId?: number | string, vr?: string): string | number | DataView | (string | number)[] | undefined;
     private _getValue;
     private _reformatToString;
+    draw(canvas: HTMLCanvasElement): void;
 }
 export default Dataset;

package/Dataset.js

@@ -1,3 +1,5 @@
+import Draw from "./Draw";
+import PixelData from "./PixelData";
 import Tag from "./Tag";
 import Value from "./Value";
 class Dataset {
@@ -32,73 +34,67 @@ class Dataset {
             writable: true,
             value: ""
         });
-        Object.defineProperty(this, "numberOfFrames", {
+        Object.defineProperty(this, "seriesInstanceUID", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "windowWidth", {
+        Object.defineProperty(this, "seriesNumber", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "windowCenter", {
+        Object.defineProperty(this, "studyDate", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "seriesInstanceUID", {
+        Object.defineProperty(this, "studyTime", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "seriesNumber", {
+        Object.defineProperty(this, "pixelRepresentation", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "studyDate", {
+        Object.defineProperty(this, "littleEndian", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "studyTime", {
+        Object.defineProperty(this, "pixeSpacing", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "pixelRepresentation", {
+        Object.defineProperty(this, "accessionNumber", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "littleEndian", {
+        Object.defineProperty(this, "bitsAllocated", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "pixeSpacing", {
+        Object.defineProperty(this, "bitsStored", {
             enumerable: true,
             configurable: true,
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "accessionNumber", {
-            enumerable: true,
-            configurable: true,
-            writable: true,
-            value: void 0
-        });
-        Object.defineProperty(this, "bitsAllocated", {
+        Object.defineProperty(this, "highBit", {
             enumerable: true,
             configurable: true,
             writable: true,
@@ -140,7 +136,20 @@ class Dataset {
             writable: true,
             value: void 0
         });
-        Object.defineProperty(this, "patientAge", {
+        /** modules */
+        Object.defineProperty(this, "voiLUTModule", {
+            enumerable: true,
+            configurable: true,
+            writable: true,
+            value: void 0
+        });
+        Object.defineProperty(this, "patientModule", {
+            enumerable: true,
+            configurable: true,
+            writable: true,
+            value: void 0
+        });
+        Object.defineProperty(this, "pixelModule", {
             enumerable: true,
             configurable: true,
             writable: true,
@@ -151,27 +160,92 @@ class Dataset {
         this.littleEndian = littleEndian;
         this.studyID = this.get(0x0020, 0x0010);
         this.studyInstanceUID = this.string(0x0020, 0x000D);
-        this.numberOfFrames = this.int(0x0028, 0x0008);
-        this.windowWidth = this.get(0x0028, 0x1050);
-        this.windowCenter = this.get(0x0028, 0x1051);
         this.seriesInstanceUID = this.get(0x0020, 0x000E);
         this.seriesNumber = this.get(0x0020, 0x0011);
-        this.studyDate = this.get(0x0008, 0x0020);
-        this.studyTime = this.get(0x0008, 0x0030);
-        this.pixelRepresentation = this.get(0x0028, 0x0103);
-        this.pixeSpacing = this.get(0x0028, 0x0030);
+        this.studyDate = this.date(0x0008, 0x0020);
+        this.studyTime = this.time(0x0008, 0x0030);
         this.accessionNumber = this.string(0x0008, 0x0050);
-        this.bitsAllocated = this.get(0x0028, 0x0100);
         this.imageType = this.get(0x0008, 0x0008);
         this.modality = this.get(0x0008, 0x0060);
         this.seriesDescription = this.string(0x0008, 0x103E);
         this.patientSex = this.get(0x0010, 0x0040);
-        this.rows = this.get(0x0028, 0x0010);
-        this.columns = this.get(0x0028, 0x0011);
-        this.patientAge = this.get(0x0010, 0x1010);
+        this.voiLUTModule = this.getVOILutModule();
+        this.patientModule = this.getPatientModule();
+        this.pixelModule = this.getPixelModule();
+    }
+    getPixelData() {
+        return PixelData.get(this);
+    }
+    getVOILutModule() {
+        return {
+            voiLUTFunction: this.get(0x0028, 0x1056),
+            windowWidth: this.int(0x0028, 0x1050),
+            windowCenter: this.int(0x0028, 0x1051),
+            voiLUTSequence: this.get(0x0028, 0x3010),
+            lutDescriptor: this.get(0x0028, 0x3002),
+            lutExplanation: this.get(0x0028, 0x3003),
+            lutData: this.get(0x0028, 0x3006),
+            windowCenterAndWidthExplanation: this.get(0x0028, 0x1055),
+        };
+    }
+    getPatientModule() {
+        return {
+            patientName: this.get(0x0010, 0x0010),
+            patientID: this.get(0x0010, 0x0020),
+            typeofPatientID: this.get(0x0010, 0x0022),
+            patientSex: this.get(0x0010, 0x0040),
+            patientBirthDate: this.get(0x0010, 0x0030),
+            patientAge: this.get(0x0010, 0x1010),
+            patientSize: this.get(0x0010, 0x1020),
+            otherPatientIDs: this.get(0x0010, 0x1000),
+            otherPatientNames: this.get(0x0010, 0x1001),
+            patientWeight: this.get(0x0010, 0x1030),
+        };
+    }
+    getPixelModule() {
+        return {
+            photometricInterpretation: this.get(0x0028, 0x0004),
+            numberOfFrames: this.int(0x0028, 0x0008),
+            pixelRepresentation: this.int(0x0028, 0x0103),
+            pixeSpacing: this.get(0x0028, 0x0030),
+            rows: this.int(0x0028, 0x0010),
+            columns: this.int(0x0028, 0x0011),
+            bitsAllocated: this.int(0x0028, 0x0100),
+            highBit: this.int(0x0028, 0x0102),
+            bitsStored: this.int(0x0028, 0x0101),
+            samplesPerPixel: this.int(0x0028, 0x0002)
+        };
+    }
+    date(group, element) {
+        const dateValue = this.get(group, element);
+        if (/^[0-9]{4}\-[0-9]{2}\-[0-9]{2}$/.exec(dateValue)) {
+            console.log('dateValue1', dateValue);
+            const dateVaues = dateValue.split('-');
+            return {
+                year: dateVaues[0],
+                month: dateVaues[1],
+                day: dateVaues[2],
+            };
+        }
+        console.log('dateValue', dateValue);
+        return dateValue;
+    }
+    time(group, element) {
+        const dateValue = this.get(group, element);
+        if (/^[0-9]{2}\:[0-9]{2}\:[0-9]{2}$/.exec(dateValue)) {
+            console.log('dateValue1', dateValue);
+            const dateVaues = dateValue.split(':');
+            return {
+                hour: dateVaues[0],
+                minute: dateVaues[1],
+                second: dateVaues[2],
+            };
+        }
+        console.log('dateValue', dateValue);
+        return dateValue;
     }
     int(group, element) {
-        const is = this.getValue(group, element, "IS");
+        const is = this.get(group, element);
         if (typeof is === "number") {
             return is;
         }
@@ -235,5 +309,12 @@ class Dataset {
         }
         return Tag.intTo4digitString(input);
     }
+    draw(canvas) {
+        const pixelDatas = this.getPixelData();
+        if (pixelDatas) {
+            //@ts-ignore
+            Draw.draw(canvas, pixelDatas, this);
+        }
+    }
 }
 export default Dataset;

package/Draw.d.ts

@@ -0,0 +1,8 @@
+import Dataset from "./Dataset";
+import { PixelArray } from "./types";
+declare class Draw {
+    static draw(canvas: HTMLCanvasElement, pixelDatas: PixelArray[], dataset: Dataset): void;
+    private static _getLUT;
+    private static _calcPixel;
+}
+export default Draw;

package/Draw.js

@@ -0,0 +1,54 @@
+import Utilities from "./Utitlities";
+class Draw {
+    static draw(canvas, pixelDatas, dataset) {
+        if (!pixelDatas.length)
+            return;
+        const pixelData = pixelDatas[0];
+        const { min, max, windowCenter, windowWidth } = Draw._getLUT(pixelData, dataset);
+        console.log('lut', min, max, windowCenter, windowWidth);
+        canvas.width = dataset.pixelModule.columns || 0;
+        canvas.height = dataset.pixelModule.rows || 0;
+        console.log(canvas.width * canvas.height, pixelData.length);
+        const context = canvas.getContext('2d');
+        const imageData = context === null || context === void 0 ? void 0 : context.createImageData(canvas.width, canvas.height);
+        if (imageData) {
+            for (var i = 0; i < pixelData.length; i++) {
+                imageData.data[4 * i] = Draw._calcPixel(pixelData[i], min, max, windowWidth, windowCenter);
+                imageData.data[4 * i + 1] = Draw._calcPixel(pixelData[i], min, max, windowWidth, windowCenter);
+                imageData.data[4 * i + 2] = Draw._calcPixel(pixelData[i], min, max, windowWidth, windowCenter);
+                imageData.data[4 * i + 3] = 255;
+            }
+            context === null || context === void 0 ? void 0 : context.putImageData(imageData, 0, 0);
+        }
+    }
+    static _getLUT(pixelData, dataset) {
+        if (dataset.voiLUTModule.windowCenter && dataset.voiLUTModule.windowWidth) {
+            const windowWidth = dataset.voiLUTModule.windowWidth;
+            const windowCenter = dataset.voiLUTModule.windowCenter;
+            return {
+                windowWidth,
+                windowCenter,
+                max: windowCenter - 0.5 + windowWidth / 2,
+                min: windowCenter - 0.5 - windowWidth / 2,
+            };
+        }
+        const { min, max } = Utilities.getMinMax(pixelData);
+        const windowWidth = max - min;
+        const windowCenter = min + windowWidth / 2 - 0.5;
+        return {
+            min,
+            max,
+            windowWidth,
+            windowCenter,
+        };
+    }
+    static _calcPixel(pixel, min, max, windowWidth, windowCenter) {
+        if (max <= pixel)
+            return 255;
+        else if (min >= pixel)
+            return 0;
+        else
+            return (Math.round(pixel - windowCenter - 0.5) / (windowWidth - 1) + 0.5) * 255;
+    }
+}
+export default Draw;

package/Parser.d.ts

@@ -17,7 +17,7 @@ declare class Parser {
     constructor(arrayBuffer: ArrayBuffer);
     parse(): Dataset;
     getDataset(): Dataset | undefined;
-    getNextTag(): void;
+    getNextElement(): void;
     getValue(len: number): ArrayBuffer;
     getNextGroupAndElement(): {
         group: number;

package/Parser.js

@@ -38,7 +38,7 @@ class Parser {
             enumerable: true,
             configurable: true,
             writable: true,
-            value: ["OB", "OW", "SQ", "UN"]
+            value: ["OB", "OW", "SQ", "UN", "UT"]
         });
         Object.defineProperty(this, "VRS", {
             enumerable: true,
@@ -116,7 +116,7 @@ class Parser {
         this.parse();
     }
     parse() {
-        this.getNextTag();
+        this.getNextElement();
         this.dataSet = new Dataset(this.tags, this.dataView, this.littleEndian);
         console.log(this.dataSet);
         this.dataSet.transferSyntaxUID = this.transferSyntaxUID;
@@ -125,7 +125,7 @@ class Parser {
     getDataset() {
         return this.dataSet;
     }
-    getNextTag() {
+    getNextElement() {
         if (this.offset >= this.arrayBuffer.byteLength) {
             return;
         }
@@ -135,7 +135,7 @@ class Parser {
         }
         if (group === 0xFFFE && (element === 0xE0DD || element === 0xE00D || element === 0xE000)) {
             this.offset += 4;
-            return this.getNextTag();
+            return this.getNextElement();
         }
         if (!this.implicit && group !== 0x0002 && this.IMPLICT_TRANSFER_SYNTAXES.includes(this.transferSyntaxUID)) {
             this.implicit = true;
@@ -151,7 +151,7 @@ class Parser {
             this.arrayBuffer = this.concatArrayBuffers(meta, infaltedBody);
             this.dataView = new DataView(this.arrayBuffer);
             this.inflated = true;
-            return this.getNextTag();
+            return this.getNextElement();
         }
         const vr = this.getNextVR(group, element);
         let len = 0;
@@ -173,25 +173,40 @@ class Parser {
             this.offset = 132;
             this.tags = {};
             this.implicit = true;
-            return this.getNextTag();
+            return this.getNextElement();
         }
         else {
-            console.log("ended", vr);
             return;
         }
         if (group === 0x0002 && element === 0x0010) {
-            console.log("transfer syntax uid", this.transferSyntaxUID);
             this.transferSyntaxUID = (Value.getString(new Uint8Array(this.arrayBuffer, this.offset, len))).replace('\0', '');
         }
         const tag = new Tag(group, element, vr, len, this.offset);
         const key = tag.generateKey();
         this.tags[key] = tag;
+        if (len === 0xFFFFFFFF && group === 0x7FE0 && element === 0x0010) {
+            let { group, element } = this.getNextGroupAndElement();
+            while (true) {
+                if (group === 0xFFFE && element === 0xE000) {
+                    const len = this.dataView.getUint32(this.offset, this.littleEndian);
+                    this.offset += 4;
+                    const t = this.getNextGroupAndElement();
+                    group = t.group;
+                    element = t.element;
+                    this.offset += len;
+                }
+                else {
+                    break;
+                }
+            }
+            this.offset -= 4;
+        }
         if (vr === "SQ") {
-            this.getNextTag();
+            this.getNextElement();
         }
         else {
             this.offset += len;
-            this.getNextTag();
+            this.getNextElement();
         }
     }
     getValue(len) {
@@ -212,6 +227,9 @@ class Parser {
         }
     }
     getNextVR(groupInt, elementInt) {
+        if (this.offset >= this.dataView.byteLength) {
+            return "";
+        }
         if (this.implicit) {
             return Tag.getTagVRFromDictionary(groupInt, elementInt) || "AA";
         }

package/PixelData.d.ts

@@ -0,0 +1,8 @@
+import Dataset from "./Dataset";
+declare class PixelData {
+    static get(dataset: Dataset): import("./types").PixelArray[];
+    private static _getUncompressed;
+    private static _getJPEG2000ImageCompression_LosslessOnly;
+    private static _getixelDataViews;
+}
+export default PixelData;

package/PixelData.js

@@ -0,0 +1,79 @@
+import JPEG2000 from "./decoder/JPEG2000";
+import UncompressDecoderr from "./decoder/Uncompressed";
+class PixelData {
+    static get(dataset) {
+        const transferSyntaxUID = dataset.transferSyntaxUID;
+        switch (transferSyntaxUID) {
+            case "1.2.840.10008.1.2.4.90":
+                return PixelData._getJPEG2000ImageCompression_LosslessOnly(dataset);
+            case "1.2.840.10008.1.2":
+            case "1.2.840.10008.1.2.1":
+            case "1.2.840.10008.1.2.2":
+            case "1.2.840.10008.1.2.1.99":
+            default:
+                return PixelData._getUncompressed(dataset);
+        }
+    }
+    static _getUncompressed(dataset) {
+        const bitsAllocated = dataset.pixelModule.bitsAllocated || 1;
+        const pixelRepresentation = dataset.pixelModule.pixelRepresentation || 0;
+        const pixelDataViews = PixelData._getixelDataViews(dataset);
+        return pixelDataViews.map((dataView) => {
+            return UncompressDecoderr.decode({
+                pixelData: dataView,
+                bitsAllocated,
+                pixelRepresentation,
+                littleEndian: dataset.littleEndian,
+            });
+        });
+    }
+    static _getJPEG2000ImageCompression_LosslessOnly(dataset) {
+        const pixelDataViews = PixelData._getixelDataViews(dataset);
+        return pixelDataViews.map((dataView) => {
+            return JPEG2000.decode({
+                pixelData: dataView,
+                bitsAllocated: dataset.pixelModule.bitsAllocated || 1,
+                pixelRepresentation: dataset.pixelModule.pixelRepresentation || 0,
+                littleEndian: dataset.littleEndian,
+            });
+        });
+    }
+    static _getixelDataViews(dataset) {
+        const pixelData = dataset.tags['0x7FE00010'] || dataset.tags['0x7FE00008'] || dataset.tags['0x7FE00009'];
+        const pixelDatas = [];
+        const numberOfFrames = dataset.pixelModule.numberOfFrames || 1;
+        if (pixelData.valueLength === 0xFFFFFFFF) {
+            let offset = pixelData.offset;
+            while (true) {
+                if (offset >= dataset.dataView.byteLength) {
+                    break;
+                }
+                const group = dataset.dataView.getUint16(offset, dataset.littleEndian);
+                offset += 2;
+                const element = dataset.dataView.getUint16(offset, dataset.littleEndian);
+                offset += 2;
+                if (group !== 0xFFFE && element !== 0xE000) {
+                    break;
+                    ;
+                }
+                const len = dataset.dataView.getUint32(offset, dataset.littleEndian);
+                offset += 4;
+                if (len !== 0) {
+                    const dataView = new DataView(dataset.dataView.buffer, offset, len);
+                    pixelDatas.push(dataView);
+                    offset += len;
+                }
+            }
+        }
+        else {
+            const frameLen = pixelData.valueLength / numberOfFrames;
+            for (let i = 0; i < numberOfFrames; i++) {
+                const offset = pixelData.offset + (frameLen * i);
+                const dataView = new DataView(dataset.dataView.buffer, offset, frameLen);
+                pixelDatas.push(dataView);
+            }
+        }
+        return pixelDatas;
+    }
+}
+export default PixelData;

package/README.md

@@ -5,8 +5,11 @@ npm i @abasb75/dicom-parser pako --save
 npm i @types/pako --save-dev
 ```
 
+# Demo
 
-#Usage
+<a href="https://abasb75.github.io/dicom-parser/">demo link</a>
+
+# Usage
 
 1. For Download dicom and parse from url:
 

package/Utitlities.d.ts

@@ -0,0 +1,12 @@
+import { PixelArray } from "./types";
+declare class Utilities {
+    static getMinMax(pixelData: PixelArray): {
+        min: number;
+        max: number;
+    };
+    static getLUTwithMinMax(min: number, max: number): {
+        windowWidth: number;
+        windowCenter: number;
+    };
+}
+export default Utilities;

package/Utitlities.js

@@ -0,0 +1,19 @@
+class Utilities {
+    static getMinMax(pixelData) {
+        let min = pixelData[0];
+        let max = pixelData[0];
+        for (let i = 0; i < pixelData.length; i++) {
+            if (pixelData[i] < min)
+                min = pixelData[i];
+            if (pixelData[i] > max)
+                max = pixelData[i];
+        }
+        return { min, max };
+    }
+    static getLUTwithMinMax(min, max) {
+        const windowWidth = max - min;
+        const windowCenter = min + windowWidth / 2;
+        return { windowWidth, windowCenter };
+    }
+}
+export default Utilities;

package/Value.d.ts

@@ -1,11 +1,12 @@
 declare class Value {
-    static byVr(dataView: DataView, offset: number, len: number, vr: string, littleEndian: boolean): string | number | (string | number)[] | undefined;
+    static byVr(dataView: DataView, offset: number, len: number, vr: string, littleEndian: boolean): string | number | DataView | (string | number)[] | undefined;
     static CS(dataView: DataView, offset: number, len: number): string | string[];
     static IS(dataView: DataView, offset: number, len: number): string | number;
     static DA(dataView: DataView, offset: number, len: number): string;
     static DS(dataView: DataView, offset: number, len: number): string | number | (string | number)[];
     static TM(dataView: DataView, offset: number, len: number): string;
-    static getString(bytes: Uint8Array | Int8Array | ArrayBuffer): string;
     static US(dataView: DataView, offset: number, len: number, littleEndian?: boolean): number | undefined;
+    static OW(dataView: DataView, offset: number, len: number): DataView;
+    static getString(bytes: Uint8Array | Int8Array | ArrayBuffer): string;
 }
 export default Value;

package/Value.js

@@ -13,6 +13,11 @@ class Value {
                 return Value.DA(dataView, offset, len);
             case "TM":
                 return Value.TM(dataView, offset, len);
+            case "OW":
+            case "OB":
+            case "OD":
+            case "OF":
+                return Value.OW(dataView, offset, len);
             case "UI":
             case "SH":
             case "LO":
@@ -50,10 +55,10 @@ class Value {
     static DS(dataView, offset, len) {
         let value = Value.getString(new Uint8Array(dataView.buffer, offset, len));
         const values = value.split("\\").map(v => {
-            if (/^[0-9]+$/.exec(v)) {
+            if (/^[0-9\-\+]+$/.exec(v)) {
                 return parseInt(v);
             }
-            else if (/^[0-9]+\.[0-9]+$/.exec(v)) {
+            else if (/^[0-9\-\+]+\.[0-9]+$/.exec(v)) {
                 return parseFloat(v);
             }
             return v;
@@ -81,14 +86,18 @@ class Value {
         }
         return `${value.slice(0, 2)}:${value.slice(2, 4)}:${value.slice(4, 6)}`;
     }
-    static getString(bytes) {
-        const decoder = new TextDecoder();
-        return decoder.decode(bytes).trim();
-    }
     static US(dataView, offset, len, littleEndian = true) {
         if (len === 2) {
             return dataView.getUint16(offset, littleEndian);
         }
     }
+    static OW(dataView, offset, len) {
+        const buffer = dataView.buffer.slice(offset, len);
+        return new DataView(buffer);
+    }
+    static getString(bytes) {
+        const decoder = new TextDecoder();
+        return decoder.decode(bytes).trim();
+    }
 }
 export default Value;

package/decoder/JPEG2000.d.ts

@@ -0,0 +1,5 @@
+import { PixelDataDecodeOptions } from "../types";
+declare class JPEG2000 {
+    static decode(options: PixelDataDecodeOptions): Uint8Array;
+}
+export default JPEG2000;

package/decoder/JPEG2000.js

@@ -0,0 +1,10 @@
+class JPEG2000 {
+    static decode(options) {
+        console.log("ddss");
+        // let arrayBuffer = options.pixelData.buffer;
+        // let offset = options.pixelData.byteOffset;
+        // const length = options.pixelData.byteLength;
+        return new Uint8Array(options.pixelData.buffer);
+    }
+}
+export default JPEG2000;

package/decoder/Uncompressed.d.ts

@@ -0,0 +1,6 @@
+import { PixelArray, PixelDataDecodeOptions } from "../types";
+declare class UncompressDecoderr {
+    static decode(options: PixelDataDecodeOptions): PixelArray;
+    private static _endianFixer;
+}
+export default UncompressDecoderr;

package/decoder/Uncompressed.js

@@ -0,0 +1,57 @@
+class UncompressDecoderr {
+    static decode(options) {
+        let arrayBuffer = options.pixelData.buffer;
+        let offset = options.pixelData.byteOffset;
+        const length = options.pixelData.byteLength;
+        switch (options.bitsAllocated) {
+            case 8:
+                return UncompressDecoderr._endianFixer(new Uint8Array(arrayBuffer, offset, length), !options.littleEndian);
+            case 16:
+                if (options.pixelRepresentation === 0) {
+                    return UncompressDecoderr._endianFixer(new Uint16Array(arrayBuffer, offset, length / 2), !options.littleEndian);
+                }
+                else {
+                    return UncompressDecoderr._endianFixer(new Int16Array(arrayBuffer, offset, length / 2), !options.littleEndian);
+                }
+            case 32:
+                return UncompressDecoderr._endianFixer(new Float32Array(arrayBuffer, offset, length / 4), !options.littleEndian);
+            default:
+                return new Uint8Array(arrayBuffer);
+        }
+    }
+    static _endianFixer(data, bigEndian = false) {
+        if (!bigEndian) {
+            return data;
+        }
+        if (data instanceof Uint16Array) {
+            const _data = new Uint16Array(data.length);
+            for (let i = 0; i < _data.length; i++) {
+                _data[i] = ((data[i] & 0xFF) << 8) | ((data[i] >> 8) & 0xF);
+            }
+            return _data;
+        }
+        else if (data instanceof Int16Array) {
+            const _data = new Int16Array(data.length);
+            for (let i = 0; i < _data.length; i++) {
+                _data[i] = ((data[i] & 0xFF) << 8) | ((data[i] >> 8) & 0xF);
+            }
+            return _data;
+        }
+        else if (data instanceof Uint32Array) {
+            const _data = new Uint32Array(data.length);
+            for (let i = 0; i < _data.length; i++) {
+                _data[i] = ((data[i] & 0xFF) << 24) | ((data[i] & 0xFF00) << 8) | ((data[i] >> 8) & 0xFF00) | ((data[i] >> 24) & 0xFF);
+            }
+            return _data;
+        }
+        else if (data instanceof Float32Array) {
+            const _data = new Float32Array(data.length);
+            for (let i = 0; i < _data.length; i++) {
+                _data[i] = ((data[i] & 0xFF) << 24) | ((data[i] & 0xFF00) << 8) | ((data[i] >> 8) & 0xFF00) | ((data[i] >> 24) & 0xFF);
+            }
+            return _data;
+        }
+        return data;
+    }
+}
+export default UncompressDecoderr;

package/decoder/decodes/jpx.d.ts

@@ -0,0 +1 @@
+export {};

package/decoder/decodes/jpx.js

@@ -0,0 +1 @@
+export {};

package/package.json

@@ -1,6 +1,6 @@
 {
     "name": "@abasb75/dicom-parser",
-    "version": "0.0.4-test",
+    "version": "0.0.6-test",
     "description": "a javascript powerfull dicom parser",
     "main": "index.js",
     "type": "module",

package/tsconfig.tsbuildinfo

@@ -1 +1 @@
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package/types.d.ts

@@ -1,5 +1,60 @@
+import Dataset from "./Dataset";
 import Tag from "./Tag";
 interface Tags {
     [key: string]: Tag;
 }
-export type { Tags, };
+interface DicomDate {
+    year: string | number;
+    month: string | number;
+    day: string | number;
+}
+interface DicomTime {
+    hour: string | number;
+    minute: string | number;
+    second: string | number;
+}
+interface DicomDateTime extends DicomDate, DicomTime {
+}
+type DicomDataset = Dataset;
+type PixelArray = Int16Array | Uint16Array | Int32Array | Uint32Array | Int8Array | Uint8Array | Float32Array;
+interface DicomVOILutModule {
+    voiLUTFunction: string;
+    windowWidth: number | undefined;
+    windowCenter: number | undefined;
+    voiLUTSequence: unknown;
+    lutDescriptor: any;
+    lutExplanation: any;
+    lutData: any;
+    windowCenterAndWidthExplanation: string;
+}
+interface DicomPatientModule {
+    patientName: string;
+    patientID: string;
+    typeofPatientID: string;
+    patientSex: string;
+    patientBirthDate: string;
+    patientAge: string;
+    patientSize: string;
+    otherPatientIDs: string;
+    otherPatientNames: string;
+    patientWeight: string;
+}
+interface DicomPixelModule {
+    photometricInterpretation: string;
+    numberOfFrames: number | undefined;
+    pixelRepresentation: number | undefined;
+    pixeSpacing: any | undefined;
+    rows: number | number | undefined;
+    columns: number | number | undefined;
+    bitsAllocated: number | undefined;
+    highBit: number | undefined;
+    bitsStored: number | undefined;
+    samplesPerPixel: number | undefined;
+}
+interface PixelDataDecodeOptions {
+    pixelData: DataView;
+    bitsAllocated: number;
+    pixelRepresentation: number;
+    littleEndian: boolean;
+}
+export type { Tags, DicomTime, DicomDate, DicomDateTime, DicomDataset, DicomVOILutModule, DicomPatientModule, DicomPixelModule, PixelArray, PixelDataDecodeOptions, };