@_linked/cli 1.12.0 → 1.14.0

package/defaults/app-react-native/eslint.config.js

@@ -0,0 +1,47 @@
+// One flat config for every workspace. `npm run lint` runs `eslint .` from the repo root.
+const expoConfig = require('eslint-config-expo/flat');
+const tseslint = require('typescript-eslint');
+
+const scope = (configs, files) => [configs].flat().map((config) => ({ ...config, files }));
+
+const mobileFiles = ['apps/mobile/**/*.{js,jsx,ts,tsx,mjs,cjs}'];
+const nodeTsFiles = ['services/api/**/*.{ts,tsx,mts}', 'packages/app-shapes/**/*.{ts,tsx,mts}'];
+
+module.exports = [
+  {
+    ignores: [
+      '**/node_modules/**',
+      '**/lib/**',
+      '**/.expo/**',
+      '**/ios/**',
+      '**/android/**',
+      '**/dist/**',
+      // Mirrors .gitignore: only the enumerated workspace packages under packages/ are this repo's.
+      'packages/*',
+      '!packages/app-shapes',
+    ],
+  },
+
+  ...scope(expoConfig, mobileFiles),
+  {
+    files: mobileFiles,
+    rules: {
+      // The @_linked/server root barrel pulls express, webpack and react-dom into the bundle.
+      'no-restricted-imports': [
+        'error',
+        {
+          paths: [
+            {
+              name: '@_linked/server',
+              message:
+                'Import @_linked/server by subpath (e.g. @_linked/server/shapes/quadstores/BackendAPIStore); the root barrel pulls express, webpack and react-dom.',
+            },
+          ],
+          patterns: [{ group: ['@_linked/server/backend*'], message: 'Backend-only entry.' }],
+        },
+      ],
+    },
+  },
+
+  ...scope(tseslint.configs.recommended, nodeTsFiles),
+];

package/defaults/app-react-native/gitignore.template

@@ -4,3 +4,8 @@ packages/*
 !packages/app-shapes/
 .expo/
 dist/
+# Docker Compose overrides (e.g. FUSEKI_PORT); see services/api/README.md.
+/.env
+services/api/.env
+services/api/data/
+packages/app-shapes/lib/

package/defaults/app-react-native/package.json

@@ -6,9 +6,19 @@
     "services/api",
     "packages/app-shapes"
   ],
-  "overrides": {
-    "@_linked/react": {
-      "react": "19.2.3"
-    }
+  "scripts": {
+    "fuseki:up": "docker compose up -d --wait fuseki",
+    "fuseki:down": "docker compose down",
+    "api": "npm start -w services/api",
+    "check:react": "node scripts/check-react.mjs",
+    "lint": "eslint .",
+    "typecheck": "tsc --noEmit -p apps/mobile && tsc --noEmit -p services/api && tsc --noEmit -p packages/app-shapes",
+    "test": "npm test -w apps/mobile && npm test -w services/api",
+    "test:integration": "npm run test:integration -w apps/mobile"
+  },
+  "devDependencies": {
+    "eslint": "9.39.5",
+    "eslint-config-expo": "57.0.2",
+    "typescript-eslint": "8.70.0"
   }
 }

package/defaults/app-react-native/packages/app-shapes/package.json

@@ -2,9 +2,26 @@
   "name": "app-shapes",
   "version": "0.0.0",
   "private": true,
-  "main": "src/index.ts",
-  "types": "src/index.ts",
+  "type": "module",
+  "linkedPackage": true,
+  "linked": {
+    "extensionlessImports": true
+  },
+  "exports": {
+    ".": {
+      "types": "./src/index.ts",
+      "react-native": "./src/index.ts",
+      "development": "./src/index.ts",
+      "default": "./lib/esm/index.js"
+    }
+  },
+  "scripts": {
+    "build": "linked build"
+  },
   "dependencies": {
-    "@_linked/core": "2.18.0"
+    "@_linked/core": "2.18.1"
+  },
+  "devDependencies": {
+    "@_linked/cli": "1.13.0"
   }
 }

package/defaults/app-react-native/packages/app-shapes/tsconfig-esm.json

@@ -0,0 +1,12 @@
+{
+  "extends": "./tsconfig.json",
+  "compilerOptions": {
+    "noEmit": false,
+    "declaration": true,
+    "module": "esnext",
+    "target": "es2018",
+    "moduleResolution": "bundler",
+    "rootDir": "src",
+    "outDir": "lib/esm"
+  }
+}

package/defaults/app-react-native/scripts/check-react.mjs

@@ -0,0 +1,55 @@
+#!/usr/bin/env node
+// One React for the app: `react` resolved from apps/mobile, from the installed @_linked/react and from react-native
+// must be the same file. `npm ls react` is not used because @_linked/server and @_linked/server-utils nest their
+// own copies, which the app never loads.
+import { existsSync, readFileSync, realpathSync } from 'node:fs';
+import { createRequire } from 'node:module';
+import { dirname, join, resolve } from 'node:path';
+import { fileURLToPath } from 'node:url';
+
+const EXPECTED_VERSION = '19.2.3';
+const repoRoot = resolve(dirname(fileURLToPath(import.meta.url)), '..');
+const mobileDir = join(repoRoot, 'apps/mobile');
+
+const failures = [];
+
+/** Resolves `react`'s entry file as Node would from `fromDir`, following symlinks. */
+function resolveReact(fromDir) {
+  const require = createRequire(join(fromDir, 'noop.js'));
+  return realpathSync(require.resolve('react'));
+}
+
+/** Finds an installed package's directory from `fromDir` by the node_modules walk (works when exports hide package.json). */
+function packageDir(name, fromDir) {
+  const require = createRequire(join(fromDir, 'noop.js'));
+  for (const base of require.resolve.paths(name) ?? []) {
+    const dir = join(base, name);
+    if (existsSync(join(dir, 'package.json'))) return realpathSync(dir);
+  }
+  return null;
+}
+
+const appReact = resolveReact(mobileDir);
+const appReactPkg = JSON.parse(readFileSync(join(dirname(appReact), 'package.json'), 'utf8'));
+console.log(`apps/mobile          -> react@${appReactPkg.version} ${appReact}`);
+if (appReactPkg.version !== EXPECTED_VERSION) {
+  failures.push(`apps/mobile resolves react@${appReactPkg.version}, expected ${EXPECTED_VERSION}.`);
+}
+
+for (const name of ['@_linked/react', 'react-native']) {
+  const dir = packageDir(name, mobileDir);
+  if (!dir) {
+    failures.push(`${name} is not installed where apps/mobile can resolve it.`);
+    continue;
+  }
+  const react = resolveReact(dir);
+  console.log(`${name.padEnd(20)} -> ${react}`);
+  if (react !== appReact) failures.push(`${name} (${dir}) resolves a different react: ${react}`);
+}
+
+if (failures.length) {
+  console.error('\ncheck:react FAILED: the app would load more than one React.');
+  for (const f of failures) console.error(`  - ${f}`);
+  process.exit(1);
+}
+console.log('\ncheck:react OK: one React for the app.');

package/defaults/app-react-native/services/api/README.md

@@ -1,4 +1,52 @@
 # api
 
-Placeholder for the backend service. It is a workspace so the monorepo layout is stable; the server, its
-storage configuration and its dependency on the shapes package are added when the backend is built.
+The Linked backend: `@_linked/server` in API-only mode (`linked start --api-only`), with no web frontend. The
+mobile app's `BackendAPIStore` sends DSL queries here; the generic `BackendAPIStoreProvider` forwards them to
+Fuseki. Shapes come from `app-shapes`, which Vite loads from source in development.
+
+## Run
+
+```sh
+cp services/api/.env.example services/api/.env   # once
+npm run fuseki:up                                # from the repo root; Docker Compose Fuseki on :3030
+npm run api                                      # API on :4000; GET / is 404 by design
+```
+
+`npm run api` checks that Fuseki answers first and exits with "Run `npm run fuseki:up`" if it does not.
+
+**Port 3030 taken** (for example by another project's Fuseki): pick another host port in two places.
+1. A root `.env` (gitignored; Docker Compose reads it automatically): `FUSEKI_PORT=3031`.
+2. `services/api/.env`: `FUSEKI_BASE_URL=http://localhost:3031`.
+
+The integration tests read `FUSEKI_BASE_URL`, or `FUSEKI_PORT`, from the shell environment
+(`FUSEKI_PORT=3031 npm run test:integration`), then from `services/api/.env`. They refuse to reset anything unless
+that port is the one Docker Compose publishes for this repo's `fuseki` service.
+
+## Backend export
+
+`package.json` exports `./backend` under the `development` condition only (`src/backend.ts`), which is what
+`linked start` uses. A production start is not set up yet.
+
+## Storage
+
+- **Graph:** `linked.backend.datasets.json` configures the `appData` Fuseki store. `FUSEKI_DATASET` picks the
+  dataset (`app-dev`) and `FUSEKI_DB_TYPE` its type (`tdb2`, or `mem` for tests); it is created on startup.
+  The integration tests use the in-memory `app-test` dataset and reset it on every run.
+- **Files:** a `LocalFileStore` in `services/api/data/uploads/` by default (the path is relative to the working
+  directory, which is `services/api` under `npm run api`). When all of `AWS_ACCESS_KEY_ID`,
+  `AWS_SECRET_ACCESS_KEY`, `AWS_REGION`, `S3_BUCKET_ENDPOINT` and `S3_FILES_BUCKET_NAME` are set, an `S3FileStore`
+  (S3, or an S3-compatible service such as DigitalOcean Spaces) is used instead. The S3 branch is not yet verified against a real bucket.
+
+## Dependencies
+
+`react-dom` is a direct dependency although the API renders no pages: `LinkedServer` imports `react-dom/server`
+at load time, and the root React is 19.2.3 (for `apps/mobile`), so `@_linked/server`'s own `react-dom` 18 is
+nested where Vite SSR cannot resolve it. Pinning `react-dom` 19.2.3 here hoists it next to the root React.
+
+`linked start` finds the hoisted `app-shapes` workspace and runs in workspace mode: Vite loads `app-shapes` from
+`src` through its `development` export condition, while published packages such as `@_linked/core` and
+`@_linked/fuseki` stay external, so the stores `loadStores` imports share one core instance.
+
+## Test
+
+`npm test -w services/api` runs the unit tests with `node --test`.

package/defaults/app-react-native/services/api/env.example.template

@@ -0,0 +1,11 @@
+PORT=4000
+SITE_ROOT=http://localhost:4000
+DATA_ROOT=http://localhost:4000/data
+NODE_ENV=development
+FUSEKI_BASE_URL=http://localhost:3030
+FUSEKI_DATASET=app-dev
+FUSEKI_DB_TYPE=tdb2
+FUSEKI_USER=admin
+FUSEKI_PASSWORD=admin
+# Optional, selects S3FileStore (S3 or an S3-compatible service such as DigitalOcean Spaces) when all are set:
+# AWS_ACCESS_KEY_ID= AWS_SECRET_ACCESS_KEY= AWS_REGION= S3_BUCKET_ENDPOINT= S3_FILES_BUCKET_NAME=

package/defaults/app-react-native/services/api/linked.backend.datasets.json

@@ -0,0 +1,15 @@
+{
+  "datasets": {
+    "appData": {
+      "store": "@_linked/fuseki/shapes/FusekiStore",
+      "config": {
+        "endpoint": "${FUSEKI_BASE_URL:-http://localhost:3030}/${FUSEKI_DATASET:-app-dev}",
+        "credentials": {
+          "type": "basic",
+          "username": "${FUSEKI_USER:-admin}",
+          "password": "${FUSEKI_PASSWORD:-admin}"
+        }
+      }
+    }
+  }
+}

package/defaults/app-react-native/services/api/linked.backend.storage.ts

@@ -0,0 +1,35 @@
+// Loaded by `linked start` (Vite SSR) before the server starts: registers the graph store and the file store.
+import datasetsConfig from './linked.backend.datasets.json' with { type: 'json' };
+import { parseDatasetsConfig } from '@_linked/core/utils/parseDatasetsConfig';
+import { loadStores } from '@_linked/core/utils/loadStores';
+import { LinkedStorage } from '@_linked/core/utils/LinkedStorage';
+import { LinkedFileStorage } from '@_linked/core/utils/LinkedFileStorage';
+import type { FusekiStore } from '@_linked/fuseki/shapes/FusekiStore';
+import { S3FileStore } from '@_linked/s3/shapes/S3FileStore';
+import { LocalFileStore } from '@_linked/server/shapes/filestores/LocalFileStore';
+import { hasS3Env } from './src/fileStoreEnv';
+
+const env = process.env;
+
+const stores = await loadStores(parseDatasetsConfig(datasetsConfig, env));
+const appData = stores.appData as FusekiStore;
+// Creates the dataset on first start; its type comes from FUSEKI_DB_TYPE (tdb2 for dev, mem for tests).
+// Awaited so the first query never races the creation.
+await appData.ensureDatasetExists();
+LinkedStorage.setDefaultDataset(appData);
+
+// The S3 branch is not yet verified against a real bucket.
+// LocalFileStore's name only forms its URI. Its directory is `data/uploads`, relative to the working directory, and
+// `linked start` runs in services/api, so files land in services/api/data/uploads/ (gitignored).
+const fileStore = hasS3Env(env)
+  ? new S3FileStore('files', {
+      bucketName: env.S3_FILES_BUCKET_NAME,
+      clientConfig: {
+        endpoint: env.S3_BUCKET_ENDPOINT,
+        region: env.AWS_REGION,
+        accessKeyId: env.AWS_ACCESS_KEY_ID,
+        secretAccessKey: env.AWS_SECRET_ACCESS_KEY,
+      },
+    })
+  : new LocalFileStore(`${env.NODE_ENV || 'development'}-files`);
+LinkedFileStorage.setDefaultDataset(fileStore);

package/defaults/app-react-native/services/api/package.json

@@ -1,5 +1,31 @@
 {
   "name": "api",
+  "version": "0.0.0",
   "private": true,
-  "version": "0.0.0"
+  "type": "module",
+  "linkedApp": true,
+  "exports": {
+    "./backend": {
+      "development": "./src/backend.ts"
+    }
+  },
+  "scripts": {
+    "start": "node scripts/wait-for-fuseki.mjs && linked start --api-only",
+    "test": "node --experimental-strip-types --no-warnings=ExperimentalWarning --test test/*.test.mjs"
+  },
+  "dependencies": {
+    "@_linked/core": "2.18.1",
+    "@_linked/fuseki": "3.0.0",
+    "@_linked/s3": "1.1.0",
+    "@_linked/schema": "1.1.2",
+    "@_linked/server": "2.3.0",
+    "@_linked/server-utils": "1.2.0",
+    "app-shapes": "*",
+    "react-dom": "19.2.3"
+  },
+  "devDependencies": {
+    "@_linked/cli": "1.13.0",
+    "@types/node": "22.19.1",
+    "typescript": "6.0.3"
+  }
 }

package/defaults/app-react-native/services/api/scripts/wait-for-fuseki.mjs

@@ -0,0 +1,26 @@
+// Fails fast when Fuseki is down, instead of letting the API or the integration tests time out.
+// Reads FUSEKI_BASE_URL from the environment, then from services/api/.env, then defaults to localhost:3030.
+// WAIT_FOR_FUSEKI_TIMEOUT_MS overrides the 5 s wait (the tests use a short one).
+import { existsSync } from 'node:fs';
+import { dirname, resolve } from 'node:path';
+import { fileURLToPath } from 'node:url';
+
+const envFile = resolve(dirname(fileURLToPath(import.meta.url)), '../.env');
+if (!process.env.FUSEKI_BASE_URL && existsSync(envFile)) process.loadEnvFile(envFile);
+
+const baseUrl = (process.env.FUSEKI_BASE_URL || 'http://localhost:3030').replace(/\/$/, '');
+const pingUrl = `${baseUrl}/$/ping`;
+const deadline = Date.now() + (Number(process.env.WAIT_FOR_FUSEKI_TIMEOUT_MS) || 5000);
+
+while (Date.now() < deadline) {
+  try {
+    const res = await fetch(pingUrl, { signal: AbortSignal.timeout(1000) });
+    if (res.ok) process.exit(0);
+  } catch {
+    // Not up yet; retry until the deadline.
+  }
+  await new Promise((r) => setTimeout(r, 250));
+}
+
+console.error(`Fuseki is not reachable at ${baseUrl}. Run \`npm run fuseki:up\`.`);
+process.exit(1);

package/defaults/app-react-native/services/api/src/backend.ts

@@ -0,0 +1,9 @@
+import { BackendProvider } from '@_linked/server-utils/utils/BackendProvider';
+// Registers the Person shape the app's example components query. LinkedServer auto-loads only the workspace
+// shape packages (app-shapes); a shape from an installed package must be imported here, or the API rejects
+// queries for it ("Cannot resolve shape"). In the web app-template the page render imports it instead.
+import '@_linked/schema/shapes/Person';
+
+// No custom methods: the app's DSL queries reach Fuseki through @_linked/server's generic BackendAPIStoreProvider
+// (select/create/update/delete forwarded to LinkedStorage). LinkedServer loads this through exports["./backend"].
+export class Backend extends BackendProvider {}

package/defaults/app-react-native/services/api/src/fileStoreEnv.ts

@@ -0,0 +1,14 @@
+// Pure environment check, kept free of Linked imports so `node --test` can load it without Vite.
+
+export const S3_ENV_KEYS = [
+  'AWS_ACCESS_KEY_ID',
+  'AWS_SECRET_ACCESS_KEY',
+  'AWS_REGION',
+  'S3_BUCKET_ENDPOINT',
+  'S3_FILES_BUCKET_NAME',
+] as const;
+
+/** True when every S3 variable is set and non-empty: the API then stores files in S3 (or an S3-compatible service). */
+export function hasS3Env(env: Record<string, string | undefined>): boolean {
+  return S3_ENV_KEYS.every((key) => Boolean(env[key]));
+}

package/defaults/app-react-native/services/api/test/hasS3Env.test.mjs

@@ -0,0 +1,28 @@
+import assert from 'node:assert/strict';
+import { test } from 'node:test';
+
+import { hasS3Env } from '../src/fileStoreEnv.ts';
+
+const all = {
+  AWS_ACCESS_KEY_ID: 'key',
+  AWS_SECRET_ACCESS_KEY: 'secret',
+  AWS_REGION: 'us-east-1',
+  S3_BUCKET_ENDPOINT: 'https://s3.example.com',
+  S3_FILES_BUCKET_NAME: 'app-files',
+};
+
+test('false for an empty environment', () => {
+  assert.equal(hasS3Env({}), false);
+});
+
+test('false when only S3_BUCKET_ENDPOINT is set', () => {
+  assert.equal(hasS3Env({ S3_BUCKET_ENDPOINT: all.S3_BUCKET_ENDPOINT }), false);
+});
+
+test('false when a variable is empty', () => {
+  assert.equal(hasS3Env({ ...all, AWS_REGION: '' }), false);
+});
+
+test('true when all five variables are set', () => {
+  assert.equal(hasS3Env(all), true);
+});

package/defaults/app-react-native/services/api/test/waitForFuseki.test.mjs

@@ -0,0 +1,27 @@
+import assert from 'node:assert/strict';
+import { spawnSync } from 'node:child_process';
+import { createServer } from 'node:net';
+import { dirname, resolve } from 'node:path';
+import { test } from 'node:test';
+import { fileURLToPath } from 'node:url';
+
+const script = resolve(dirname(fileURLToPath(import.meta.url)), '../scripts/wait-for-fuseki.mjs');
+
+/** A port nothing listens on: bind an ephemeral port, then release it. */
+async function closedPort() {
+  const server = createServer();
+  await new Promise((r) => server.listen(0, '127.0.0.1', r));
+  const { port } = server.address();
+  await new Promise((r) => server.close(r));
+  return port;
+}
+
+test('exits 1 with the fuseki:up hint when Fuseki is not reachable', async () => {
+  const baseUrl = `http://127.0.0.1:${await closedPort()}`;
+  const result = spawnSync(process.execPath, [script], {
+    env: { ...process.env, FUSEKI_BASE_URL: baseUrl, WAIT_FOR_FUSEKI_TIMEOUT_MS: '300' },
+    encoding: 'utf8',
+  });
+  assert.equal(result.status, 1);
+  assert.match(result.stderr, new RegExp(`Fuseki is not reachable at ${baseUrl}\\. Run \`npm run fuseki:up\`\\.`));
+});

package/defaults/app-react-native/services/api/tsconfig.json

@@ -0,0 +1,15 @@
+{
+  "compilerOptions": {
+    "target": "ES2022",
+    "module": "ESNext",
+    "moduleResolution": "bundler",
+    "strict": true,
+    "experimentalDecorators": true,
+    "resolveJsonModule": true,
+    "allowImportingTsExtensions": true,
+    "skipLibCheck": true,
+    "noEmit": true,
+    "types": ["node"]
+  },
+  "include": ["src", "linked.backend.storage.ts"]
+}

package/lib/esm/cli-methods.d.ts

@@ -24,7 +24,7 @@ export declare const createApp: (name: any, basePath?: string, options?: {
 }) => Promise<void>;
 /**
  * iOS bundle identifier from the app domain and prefix:
- * ('formaestudios.com', 'formae') -> 'com.formaestudios.formae'.
+ * ('example.com', 'demo') -> 'com.example.demo'.
  */
 export declare function reactNativeBundleId(appDomain: string, appPrefix: string): string;
 /**
@@ -34,6 +34,11 @@ export declare function reactNativeBundleId(appDomain: string, appPrefix: string
 export declare const RN_PREFIX_PATTERN: RegExp;
 /** Placeholder name of the shapes package in defaults/app-react-native. */
 export declare const RN_SHAPES_TOKEN = "app-shapes";
+/**
+ * Literal tokens in defaults/app-react-native that are replaced by names
+ * derived from the app prefix: the shapes package and the Fuseki datasets.
+ */
+export declare function reactNativeTokens(appPrefix: string): Record<string, string>;
 /**
  * Scaffold the React Native monorepo from defaults/app-react-native.
  * Identity is stamped into named fields only; the global ${...} substitution
@@ -89,6 +94,11 @@ export declare const upgradePackages: () => Promise<void>;
 export declare const createPackage: (name: any, uriBase?: any, basePath?: string) => Promise<void>;
 export declare const register: (registryURL: any) => Promise<void>;
 export declare const buildPackage: (target: any, target2: any, packagePath?: string, logResults?: boolean) => Promise<any>;
+type BuildStep = {
+    name: string;
+    apply: () => Promise<unknown>;
+};
+export declare const planBuildSteps: (pkgJson: any, packagePath: string) => BuildStep[];
 export declare const compilePackage: (packagePath?: string) => Promise<void>;
 export declare const compilePackageESM: (packagePath?: string) => Promise<boolean>;
 export declare const compilePackageCJS: (packagePath?: string) => Promise<boolean | {

package/lib/esm/cli-methods.d.ts.map

@@ -1 +1 @@
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