@199-bio/engram 0.6.1 → 0.7.2

package/dist/index.js

@@ -14,7 +14,7 @@ import { EngramDatabase } from "./storage/database.js";
 import { KnowledgeGraph } from "./graph/knowledge-graph.js";
 import { createRetriever } from "./retrieval/colbert.js";
 import { HybridSearch } from "./retrieval/hybrid.js";
-import { EngramWebServer } from "./web/server.js";
+import { EngramWebServer, getRunningServerUrl } from "./web/server.js";
 import { Consolidator } from "./consolidation/consolidator.js";
 // ============ Configuration ============
 const DB_PATH = process.env.ENGRAM_DB_PATH
@@ -44,11 +44,21 @@ async function initialize() {
     if (consolidator.isConfigured()) {
         console.error(`[Engram] Consolidation enabled (ANTHROPIC_API_KEY found)`);
     }
+    // Start web server automatically (unless another instance is already running)
+    const existingUrl = getRunningServerUrl();
+    if (!existingUrl) {
+        webServer = new EngramWebServer({ db, graph, search });
+        const url = await webServer.start();
+        console.error(`[Engram] Web interface: ${url}`);
+    }
+    else {
+        console.error(`[Engram] Web interface already running: ${existingUrl}`);
+    }
 }
 // ============ MCP Server ============
 const server = new Server({
     name: "engram",
-    version: "0.6.0",
+    version: "0.7.2",
 }, {
     capabilities: {
         tools: {},
@@ -59,7 +69,7 @@ const server = new Server({
 const TOOLS = [
     {
         name: "remember",
-        description: "Store information with entities and relationships. Extract key people, organizations, and places from the content and pass them as entities. Include relationships between entities when mentioned (e.g., 'works_at', 'lives_in', 'knows').",
+        description: "Store NEW information the user shares. Extract entities (people, organizations, places) and relationships. Do NOT use for corrections - use edit_memory instead. Do NOT use before checking if info already exists - use recall first.",
         inputSchema: {
             type: "object",
             properties: {
@@ -69,14 +79,14 @@ const TOOLS = [
                 },
                 importance: {
                     type: "number",
-                    description: "0-1 score. Use 0.8+ for key facts (names, preferences, important events), 0.5 for general info, 0.3- for trivial mentions",
+                    description: "0-1 score with anchors: 0.9=core identity (name, birthday, family), 0.8=major preferences/life events, 0.6=notable facts, 0.5=general info (default), 0.3=casual mentions, 0.1=trivial/ephemeral",
                     minimum: 0,
                     maximum: 1,
                     default: 0.5,
                 },
                 emotional_weight: {
                     type: "number",
-                    description: "0-1 emotional significance. Use 0.8+ for emotionally charged content, celebrations, losses. Affects memory retention.",
+                    description: "0-1 emotional significance with anchors: 0.9=major life events (births, deaths, achievements), 0.7=celebrations/disappointments, 0.5=neutral (default), 0.3=mild sentiment, 0.1=purely factual",
                     minimum: 0,
                     maximum: 1,
                     default: 0.5,
@@ -91,7 +101,7 @@ const TOOLS = [
                     items: {
                         type: "object",
                         properties: {
-                            name: { type: "string", description: "Entity name (e.g., 'Boris Djordjevic', 'Google', 'Paris')" },
+                            name: { type: "string", description: "Entity name (e.g., 'John Smith', 'Google', 'Paris')" },
                             type: { type: "string", enum: ["person", "organization", "place"], description: "Entity type" },
                         },
                         required: ["name", "type"],
@@ -123,7 +133,7 @@ const TOOLS = [
     },
     {
         name: "recall",
-        description: "PRIMARY SEARCH TOOL. Use this FIRST when answering any question about stored information. Searches across all memories using semantic understanding, keywords, and knowledge graph connections. Returns relevant memories with context.",
+        description: "Search stored memories. Use FIRST before answering questions about the user, their preferences, history, or anything previously discussed. Also use before remember to check if information already exists.",
         inputSchema: {
             type: "object",
             properties: {
@@ -154,13 +164,13 @@ const TOOLS = [
     },
     {
         name: "forget",
-        description: "Delete a specific memory by its ID. Use only when explicitly asked to remove information.",
+        description: "Delete a memory by its ID. Use when user explicitly asks to remove or forget specific stored information. Get the memory ID from recall results first.",
         inputSchema: {
             type: "object",
             properties: {
                 id: {
                     type: "string",
-                    description: "The memory ID to remove",
+                    description: "The memory ID to delete (get this from recall results)",
                 },
             },
             required: ["id"],
@@ -173,6 +183,37 @@ const TOOLS = [
             openWorldHint: false,
         },
     },
+    {
+        name: "edit_memory",
+        description: "Correct or update an existing memory. Use instead of forget+remember when fixing mistakes, updating outdated info, or adjusting importance. Preserves the memory's history and relationships.",
+        inputSchema: {
+            type: "object",
+            properties: {
+                id: {
+                    type: "string",
+                    description: "The memory ID to edit (get this from recall results)",
+                },
+                content: {
+                    type: "string",
+                    description: "New content for the memory (replaces existing). Omit to keep current content.",
+                },
+                importance: {
+                    type: "number",
+                    description: "New importance (0-1): 0.9=core identity, 0.8=major, 0.5=normal, 0.3=minor. Omit to keep current.",
+                    minimum: 0,
+                    maximum: 1,
+                },
+            },
+            required: ["id"],
+        },
+        annotations: {
+            title: "Edit Memory",
+            readOnlyHint: false,
+            destructiveHint: false,
+            idempotentHint: true,
+            openWorldHint: false,
+        },
+    },
     {
         name: "engram_web",
         description: "Launch the Engram web interface for browsing, searching, and editing memories visually. Returns a URL to open in your browser.",
@@ -196,7 +237,7 @@ const TOOLS = [
     },
     {
         name: "consolidate",
-        description: "Run memory consolidation to compress episodes into memories and memories into digests. Like sleep for the memory system. Use periodically or when requested.",
+        description: "Run memory consolidation to compress episodes into memories and memories into digests. Like sleep for the memory system. Requires ANTHROPIC_API_KEY. Use periodically or when explicitly requested.",
         inputSchema: {
             type: "object",
             properties: {
@@ -213,7 +254,7 @@ const TOOLS = [
             readOnlyHint: false,
             destructiveHint: false,
             idempotentHint: false,
-            openWorldHint: false,
+            openWorldHint: true, // Calls Anthropic API for consolidation
         },
     },
 ];
@@ -317,19 +358,85 @@ server.setRequestHandler(CallToolRequestSchema, async (request) => {
                 }
                 // Remove from semantic index
                 await search.removeFromIndex(id);
-                // Delete from database
-                db.deleteMemory(id);
+                // Soft-delete: mark as disabled instead of hard delete
+                db.updateMemory(id, { disabled: true });
                 return {
                     content: [
                         {
                             type: "text",
-                            text: JSON.stringify({ success: true, deleted_id: id }),
+                            text: JSON.stringify({ success: true, disabled_id: id, message: "Memory disabled (soft-deleted)" }),
+                        },
+                    ],
+                };
+            }
+            case "edit_memory": {
+                const { id, content, importance } = args;
+                const memory = db.getMemory(id);
+                if (!memory) {
+                    return {
+                        content: [
+                            {
+                                type: "text",
+                                text: JSON.stringify({ success: false, error: "Memory not found" }),
+                            },
+                        ],
+                    };
+                }
+                // Build updates object
+                const updates = {};
+                if (content !== undefined)
+                    updates.content = content;
+                if (importance !== undefined)
+                    updates.importance = importance;
+                if (Object.keys(updates).length === 0) {
+                    return {
+                        content: [
+                            {
+                                type: "text",
+                                text: JSON.stringify({ success: false, error: "No updates provided" }),
+                            },
+                        ],
+                    };
+                }
+                // Update the memory
+                const updated = db.updateMemory(id, updates);
+                // Re-index if content changed
+                if (content !== undefined && updated) {
+                    await search.removeFromIndex(id);
+                    await search.indexMemory(updated);
+                }
+                return {
+                    content: [
+                        {
+                            type: "text",
+                            text: JSON.stringify({
+                                success: true,
+                                memory_id: id,
+                                updated_fields: Object.keys(updates),
+                            }),
                         },
                     ],
                 };
             }
             case "engram_web": {
                 const { port = 3847 } = args;
+                // Check if a server is already running (from any MCP instance)
+                const existingUrl = getRunningServerUrl();
+                if (existingUrl) {
+                    return {
+                        content: [
+                            {
+                                type: "text",
+                                text: JSON.stringify({
+                                    success: true,
+                                    url: existingUrl,
+                                    message: `Web interface already running at ${existingUrl}`,
+                                    reused: true,
+                                }, null, 2),
+                            },
+                        ],
+                    };
+                }
                 // Create or reuse web server
                 if (!webServer) {
                     webServer = new EngramWebServer({ db, graph, search, port });

package/dist/retrieval/hybrid.d.ts.map

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package/dist/storage/database.d.ts.map

@@ -1 +1 @@
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package/dist/web/chat-handler.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"chat-handler.d.ts","sourceRoot":"","sources":["../../src/web/chat-handler.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAGH,OAAO,EAAE,cAAc,EAAkB,MAAM,wBAAwB,CAAC;AACxE,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAC7D,OAAO,EAAE,YAAY,EAAE,MAAM,wBAAwB,CAAC;AAmQtD,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,GAAG,YAAY,GAAG,UAAU,GAAG,OAAO,GAAG,MAAM,CAAC;IAC5D,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,qBAAa,WAAW;IACtB,OAAO,CAAC,MAAM,CAA0B;IACxC,OAAO,CAAC,EAAE,CAAiB;IAC3B,OAAO,CAAC,KAAK,CAAiB;IAC9B,OAAO,CAAC,MAAM,CAAe;IAC7B,OAAO,CAAC,mBAAmB,CAAgC;IAC3D,OAAO,CAAC,YAAY,CAAkB;IACtC,OAAO,CAAC,YAAY,CAAoG;gBAE5G,OAAO,EAAE;QACnB,EAAE,EAAE,cAAc,CAAC;QACnB,KAAK,EAAE,cAAc,CAAC;QACtB,MAAM,EAAE,YAAY,CAAC;KACtB;IAWD,YAAY,IAAI,OAAO;IAIvB,MAAM,IAAI,OAAO;IAIjB,cAAc,IAAI,MAAM;IAIxB,YAAY,IAAI,IAAI;YAKN,YAAY;IAgBpB,IAAI,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC;IAgBzC,UAAU,CAAC,WAAW,EAAE,MAAM,GAAG,cAAc,CAAC,WAAW,CAAC;YAsHrD,cAAc;YAgFd,WAAW;CAoQ1B"}

package/dist/web/server.d.ts.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@199-bio/engram",
-  "version": "0.6.1",
+  "version": "0.7.2",
   "description": "Give Claude a perfect memory. Local-first MCP server with hybrid search.",
   "type": "module",
   "main": "dist/index.js",

package/src/consolidation/consolidator.ts

@@ -74,8 +74,8 @@ const EPISODE_EXTRACTION_SYSTEM = `You are extracting structured memories from a
       "importance": 0.5,
       "emotional_weight": 0.5,
       "event_time": "2024-12-01 or null if not mentioned",
-      "entities": [{"name": "Boris", "type": "person"}],
-      "relationships": [{"from": "Boris", "to": "Google", "type": "works_at"}]
+      "entities": [{"name": "John", "type": "person"}],
+      "relationships": [{"from": "John", "to": "Acme Corp", "type": "works_at"}]
     }
   ]
 }

package/src/index.ts

@@ -19,7 +19,7 @@ import { EngramDatabase } from "./storage/database.js";
 import { KnowledgeGraph } from "./graph/knowledge-graph.js";
 import { createRetriever } from "./retrieval/colbert.js";
 import { HybridSearch } from "./retrieval/hybrid.js";
-import { EngramWebServer } from "./web/server.js";
+import { EngramWebServer, getRunningServerUrl } from "./web/server.js";
 import { Consolidator } from "./consolidation/consolidator.js";
 
 // ============ Configuration ============
@@ -59,6 +59,16 @@ async function initialize(): Promise<void> {
   if (consolidator.isConfigured()) {
     console.error(`[Engram] Consolidation enabled (ANTHROPIC_API_KEY found)`);
   }
+
+  // Start web server automatically (unless another instance is already running)
+  const existingUrl = getRunningServerUrl();
+  if (!existingUrl) {
+    webServer = new EngramWebServer({ db, graph, search });
+    const url = await webServer.start();
+    console.error(`[Engram] Web interface: ${url}`);
+  } else {
+    console.error(`[Engram] Web interface already running: ${existingUrl}`);
+  }
 }
 
 // ============ MCP Server ============
@@ -66,7 +76,7 @@ async function initialize(): Promise<void> {
 const server = new Server(
   {
     name: "engram",
-    version: "0.6.0",
+    version: "0.7.2",
   },
   {
     capabilities: {
@@ -81,7 +91,7 @@ const TOOLS = [
   {
     name: "remember",
     description:
-      "Store information with entities and relationships. Extract key people, organizations, and places from the content and pass them as entities. Include relationships between entities when mentioned (e.g., 'works_at', 'lives_in', 'knows').",
+      "Store NEW information the user shares. Extract entities (people, organizations, places) and relationships. Do NOT use for corrections - use edit_memory instead. Do NOT use before checking if info already exists - use recall first.",
     inputSchema: {
       type: "object" as const,
       properties: {
@@ -91,14 +101,14 @@ const TOOLS = [
         },
         importance: {
           type: "number",
-          description: "0-1 score. Use 0.8+ for key facts (names, preferences, important events), 0.5 for general info, 0.3- for trivial mentions",
+          description: "0-1 score with anchors: 0.9=core identity (name, birthday, family), 0.8=major preferences/life events, 0.6=notable facts, 0.5=general info (default), 0.3=casual mentions, 0.1=trivial/ephemeral",
           minimum: 0,
           maximum: 1,
           default: 0.5,
         },
         emotional_weight: {
           type: "number",
-          description: "0-1 emotional significance. Use 0.8+ for emotionally charged content, celebrations, losses. Affects memory retention.",
+          description: "0-1 emotional significance with anchors: 0.9=major life events (births, deaths, achievements), 0.7=celebrations/disappointments, 0.5=neutral (default), 0.3=mild sentiment, 0.1=purely factual",
           minimum: 0,
           maximum: 1,
           default: 0.5,
@@ -113,7 +123,7 @@ const TOOLS = [
           items: {
             type: "object",
             properties: {
-              name: { type: "string", description: "Entity name (e.g., 'Boris Djordjevic', 'Google', 'Paris')" },
+              name: { type: "string", description: "Entity name (e.g., 'John Smith', 'Google', 'Paris')" },
               type: { type: "string", enum: ["person", "organization", "place"], description: "Entity type" },
             },
             required: ["name", "type"],
@@ -146,7 +156,7 @@ const TOOLS = [
   {
     name: "recall",
     description:
-      "PRIMARY SEARCH TOOL. Use this FIRST when answering any question about stored information. Searches across all memories using semantic understanding, keywords, and knowledge graph connections. Returns relevant memories with context.",
+      "Search stored memories. Use FIRST before answering questions about the user, their preferences, history, or anything previously discussed. Also use before remember to check if information already exists.",
     inputSchema: {
       type: "object" as const,
       properties: {
@@ -177,13 +187,13 @@ const TOOLS = [
   },
   {
     name: "forget",
-    description: "Delete a specific memory by its ID. Use only when explicitly asked to remove information.",
+    description: "Delete a memory by its ID. Use when user explicitly asks to remove or forget specific stored information. Get the memory ID from recall results first.",
     inputSchema: {
       type: "object" as const,
       properties: {
         id: {
           type: "string",
-          description: "The memory ID to remove",
+          description: "The memory ID to delete (get this from recall results)",
         },
       },
       required: ["id"],
@@ -196,6 +206,37 @@ const TOOLS = [
       openWorldHint: false,
     },
   },
+  {
+    name: "edit_memory",
+    description: "Correct or update an existing memory. Use instead of forget+remember when fixing mistakes, updating outdated info, or adjusting importance. Preserves the memory's history and relationships.",
+    inputSchema: {
+      type: "object" as const,
+      properties: {
+        id: {
+          type: "string",
+          description: "The memory ID to edit (get this from recall results)",
+        },
+        content: {
+          type: "string",
+          description: "New content for the memory (replaces existing). Omit to keep current content.",
+        },
+        importance: {
+          type: "number",
+          description: "New importance (0-1): 0.9=core identity, 0.8=major, 0.5=normal, 0.3=minor. Omit to keep current.",
+          minimum: 0,
+          maximum: 1,
+        },
+      },
+      required: ["id"],
+    },
+    annotations: {
+      title: "Edit Memory",
+      readOnlyHint: false,
+      destructiveHint: false,
+      idempotentHint: true,
+      openWorldHint: false,
+    },
+  },
   {
     name: "engram_web",
     description: "Launch the Engram web interface for browsing, searching, and editing memories visually. Returns a URL to open in your browser.",
@@ -219,7 +260,7 @@ const TOOLS = [
   },
   {
     name: "consolidate",
-    description: "Run memory consolidation to compress episodes into memories and memories into digests. Like sleep for the memory system. Use periodically or when requested.",
+    description: "Run memory consolidation to compress episodes into memories and memories into digests. Like sleep for the memory system. Requires ANTHROPIC_API_KEY. Use periodically or when explicitly requested.",
     inputSchema: {
       type: "object" as const,
       properties: {
@@ -236,7 +277,7 @@ const TOOLS = [
       readOnlyHint: false,
       destructiveHint: false,
       idempotentHint: false,
-      openWorldHint: false,
+      openWorldHint: true,  // Calls Anthropic API for consolidation
     },
   },
 ];
@@ -375,14 +416,72 @@ server.setRequestHandler(CallToolRequestSchema, async (request) => {
         // Remove from semantic index
         await search.removeFromIndex(id);
 
-        // Delete from database
-        db.deleteMemory(id);
+        // Soft-delete: mark as disabled instead of hard delete
+        db.updateMemory(id, { disabled: true });
 
         return {
           content: [
             {
               type: "text" as const,
-              text: JSON.stringify({ success: true, deleted_id: id }),
+              text: JSON.stringify({ success: true, disabled_id: id, message: "Memory disabled (soft-deleted)" }),
+            },
+          ],
+        };
+      }
+
+      case "edit_memory": {
+        const { id, content, importance } = args as {
+          id: string;
+          content?: string;
+          importance?: number;
+        };
+
+        const memory = db.getMemory(id);
+        if (!memory) {
+          return {
+            content: [
+              {
+                type: "text" as const,
+                text: JSON.stringify({ success: false, error: "Memory not found" }),
+              },
+            ],
+          };
+        }
+
+        // Build updates object
+        const updates: { content?: string; importance?: number } = {};
+        if (content !== undefined) updates.content = content;
+        if (importance !== undefined) updates.importance = importance;
+
+        if (Object.keys(updates).length === 0) {
+          return {
+            content: [
+              {
+                type: "text" as const,
+                text: JSON.stringify({ success: false, error: "No updates provided" }),
+              },
+            ],
+          };
+        }
+
+        // Update the memory
+        const updated = db.updateMemory(id, updates);
+
+        // Re-index if content changed
+        if (content !== undefined && updated) {
+          await search.removeFromIndex(id);
+          await search.indexMemory(updated);
+        }
+
+        return {
+          content: [
+            {
+              type: "text" as const,
+              text: JSON.stringify({
+                success: true,
+                memory_id: id,
+                updated_fields: Object.keys(updates),
+              }),
             },
           ],
         };
@@ -391,6 +490,24 @@ server.setRequestHandler(CallToolRequestSchema, async (request) => {
       case "engram_web": {
         const { port = 3847 } = args as { port?: number };
 
+        // Check if a server is already running (from any MCP instance)
+        const existingUrl = getRunningServerUrl();
+        if (existingUrl) {
+          return {
+            content: [
+              {
+                type: "text" as const,
+                text: JSON.stringify({
+                  success: true,
+                  url: existingUrl,
+                  message: `Web interface already running at ${existingUrl}`,
+                  reused: true,
+                }, null, 2),
+              },
+            ],
+          };
+        }
+
         // Create or reuse web server
         if (!webServer) {
           webServer = new EngramWebServer({ db, graph, search, port });

package/src/retrieval/hybrid.ts

@@ -102,7 +102,7 @@ export class HybridSearch {
       includeGraph = true,
       bm25Weight = 1.0,
       semanticWeight = 1.0,
-      graphWeight = 0.5,
+      graphWeight = 0.3,
       useReranking = true,  // Default: reranking mode for better quality
     } = options;
 
@@ -257,22 +257,46 @@ export class HybridSearch {
     }
   }
 
+  /**
+   * Normalize a word for matching: lowercase, strip punctuation, handle possessives
+   * "John's" → "john", "Paris!" → "paris", "U.S.A." → "usa"
+   */
+  private normalizeWord(word: string): string {
+    return word
+      .toLowerCase()
+      .replace(/'s$/, '')           // Remove possessives: john's → john
+      .replace(/[^\p{L}\p{N}]/gu, '') // Keep only letters/numbers (Unicode-safe)
+      .trim();
+  }
+
   /**
    * Graph-based search: find known entities in query, traverse graph
+   * Uses normalized word matching to handle punctuation and possessives
    */
   private async searchGraph(query: string): Promise<string[]> {
-    // Find known entities whose names appear in the query
-    const queryLower = query.toLowerCase();
+    // Tokenize and normalize query words
+    const queryWords = query.split(/\s+/)
+      .map(w => this.normalizeWord(w))
+      .filter(w => w.length > 0);
+    const queryWordSet = new Set(queryWords);
+
+    // Find entities whose normalized names match query words
     const allEntities = this.graph.listEntities(undefined, 500);
-    const matchedEntities = allEntities.filter(e =>
-      queryLower.includes(e.name.toLowerCase())
-    );
+    const matchedEntities = allEntities.filter(e => {
+      const entityWords = e.name.split(/\s+/)
+        .map(w => this.normalizeWord(w))
+        .filter(w => w.length > 0);
+      // Entity matches if ALL its words appear in the query
+      // e.g., "john" matches entity "John" but not "John Smith"
+      // e.g., "john's friend" matches entity "John" (possessive handled)
+      return entityWords.every(w => queryWordSet.has(w));
+    });
 
     const memoryIds = new Set<string>();
 
     for (const entity of matchedEntities) {
-      // Find related memory IDs through graph traversal
-      const relatedIds = this.graph.findRelatedMemoryIds(entity.name, 2);
+      // Depth 1: only directly related memories, not transitive connections
+      const relatedIds = this.graph.findRelatedMemoryIds(entity.name, 1);
       relatedIds.forEach(id => memoryIds.add(id));
     }