@0xmaxma/claude-gateway 1.7.8 → 1.7.10

package/dist/agent/knowledge/archive-db.js

@@ -77,6 +77,15 @@ class ArchiveDB {
          VALUES (?, ?, ?, ?, ?)`),
             // Age survives reindex: first_seen is written ONCE (never reset); a later
             // reindex of the same entry only refreshes its current path (planning-66).
+            // Counting rows BY PATH would be wrong as a backfill guard: `replaceSource`
+            // never deletes lifecycle rows, so an often-edited file accumulates rows
+            // from every past version and the count clears the bar while the CURRENT
+            // blocks' hashes are still absent (issue #398 review). Compare hashes.
+            chunkHashStats: this.db.prepare(`SELECT COUNT(*) AS total, COUNT(entry_hash) AS withHash FROM kb_chunks WHERE path = ?`),
+            countMissingLifecycle: this.db.prepare(`SELECT COUNT(*) AS c FROM (
+           SELECT DISTINCT entry_hash FROM kb_chunks WHERE path = ? AND entry_hash IS NOT NULL
+         ) t
+         WHERE NOT EXISTS (SELECT 1 FROM kb_entry_lifecycle l WHERE l.entry_hash = t.entry_hash)`),
             upsertLifecycle: this.db.prepare(`INSERT INTO kb_entry_lifecycle (entry_hash, path, first_seen) VALUES (?, ?, ?)
          ON CONFLICT(entry_hash) DO UPDATE SET path = excluded.path`),
         };
@@ -156,6 +165,7 @@ class ArchiveDB {
         invalid_at      INTEGER
       );
       CREATE INDEX IF NOT EXISTS idx_kb_lifecycle_invalid ON kb_entry_lifecycle(invalid_at);
+      CREATE INDEX IF NOT EXISTS idx_kb_lifecycle_path ON kb_entry_lifecycle(path);
       CREATE INDEX IF NOT EXISTS idx_kb_lifecycle_superseded ON kb_entry_lifecycle(superseded_by);
 
       -- Append-only retrieval log (planning-66). The Bun read path appends a row
@@ -207,6 +217,17 @@ class ArchiveDB {
       CREATE TRIGGER IF NOT EXISTS kb_chunks_rev AFTER INSERT ON kb_chunks BEGIN
         UPDATE kb_index_state SET revision = revision + 1 WHERE id = 1;
       END;
+
+      -- Watermark for the weekly shared-KB reflection pass (issue #392 part C):
+      -- the kb_index_state.revision this DB was at the last time reflection ran,
+      -- so an unchanged KB is skipped entirely (zero LLM/compute cost). Single row,
+      -- same shape as kb_index_state. Harmless/unused for a per-agent archive DB.
+      CREATE TABLE IF NOT EXISTS kb_reflection_state (
+        id            INTEGER PRIMARY KEY CHECK (id = 1),
+        last_revision INTEGER NOT NULL DEFAULT 0,
+        last_run_at   INTEGER
+      );
+      INSERT OR IGNORE INTO kb_reflection_state (id, last_revision, last_run_at) VALUES (1, 0, NULL);
     `);
         // Idempotent column migration (planning-66): a kb.sqlite built before the
         // entry_hash column exists keeps its rows via CREATE TABLE IF NOT EXISTS, but
@@ -312,6 +333,24 @@ class ArchiveDB {
         const row = this.db.prepare('SELECT revision FROM kb_index_state WHERE id = 1').get();
         return row ? row.revision : 0;
     }
+    /** The weekly reflection pass's watermark (issue #392 part C). */
+    getReflectionState() {
+        const row = this.db.prepare('SELECT last_revision, last_run_at FROM kb_reflection_state WHERE id = 1').get();
+        return { lastRevision: row?.last_revision ?? 0, lastRunAt: row?.last_run_at ?? null };
+    }
+    /** Persist the reflection pass's watermark after a run. */
+    setReflectionState(lastRevision, lastRunAt) {
+        this.db
+            .prepare('UPDATE kb_reflection_state SET last_revision = ?, last_run_at = ? WHERE id = 1')
+            .run(lastRevision, lastRunAt);
+    }
+    /** Source paths whose mtime is strictly newer than `sinceMtime` (issue #392 part C). */
+    changedSourcePaths(sinceMtime) {
+        const rows = this.db
+            .prepare('SELECT path FROM kb_sources WHERE mtime > ? ORDER BY path')
+            .all(sinceMtime);
+        return rows.map((r) => r.path);
+    }
     /** Total chunk count (test/introspection helper). */
     chunkCount() {
         const row = this.db.prepare('SELECT COUNT(*) AS n FROM kb_chunks').get();
@@ -460,6 +499,97 @@ class ArchiveDB {
             updatedAt: r.updated_at,
         }));
     }
+    /**
+     * OR-based FTS5 near-duplicate search: "is anything like this already here?"
+     * Node-side (`node:sqlite`) twin of `findSimilarSharedNotes`'s query shape in
+     * `mcp/tools/memory/archive-reader.ts` (Bun/`bun:sqlite`, same on-disk file) —
+     * keep the two matching. Unlike `search()` above (implicit AND — every token
+     * must match), terms are OR'd and capped at 12: a near-duplicate rarely repeats
+     * every single word of the seed text, so an AND match would almost never hit.
+     */
+    /**
+     * Near-duplicate RECALL: OR the seed's first `maxTerms` tokens and rank by
+     * BM25. Loose by construction — a real near-duplicate rarely repeats every
+     * word of the seed — so a caller that acts on the result unattended must apply
+     * its own precision bar (`filterNearDuplicates`). The nightly promoter passes
+     * `SEED_TERM_BUDGET` (16) with a name/content-balanced seed; the Bun-side twin
+     * in `mcp/tools/memory/archive-reader.ts` still uses 12 with a raw seed, which
+     * is fine because its result is shown to a human who must confirm the write.
+     */
+    searchSimilar(seedText, limit = 3, maxTerms = 12) {
+        const match = seedText
+            .split(/[^\p{L}\p{N}_]+/u)
+            .filter(Boolean)
+            .slice(0, maxTerms)
+            .map((t) => `"${t.replace(/"/g, '""')}"`)
+            .join(' OR ');
+        if (!match)
+            return [];
+        const rows = this.db
+            .prepare(`SELECT c.id, c.path, c.start_line, c.end_line, c.text, c.updated_at
+         FROM kb_chunks_fts f JOIN kb_chunks c ON c.rowid_id = f.rowid
+         WHERE kb_chunks_fts MATCH ? ORDER BY bm25(kb_chunks_fts) LIMIT ?`)
+            .all(match, limit);
+        return rows.map((r) => ({
+            id: r.id,
+            path: r.path,
+            startLine: r.start_line,
+            endLine: r.end_line,
+            text: r.text,
+            updatedAt: r.updated_at,
+        }));
+    }
+    /**
+     * Ensure lifecycle rows exist for a source the indexer did NOT re-chunk
+     * (issue #398). `reindexInto` skips unchanged files by content hash and
+     * `continue`s before entry blocks are ever computed, so a note that predates
+     * the lifecycle feature — or any note untouched since — never got a row, and
+     * the staleness GC (which selects only from `kb_entry_lifecycle`) could not
+     * see it. A live vault sat at 2 lifecycle rows for 40 indexed notes.
+     *
+     * `firstSeen` must be the source's mtime, NOT the backfill time: seeding
+     * "now" would reset every existing note's age and push any reclamation out by
+     * another full `staleTtlDays`. The upsert preserves `first_seen` on conflict,
+     * so repeated backfills are idempotent.
+     */
+    backfillLifecycle(sourcePath, firstSeen, 
+    // A THUNK, not an array: parsing entry blocks costs a full line scan plus a
+    // sha256 per block, and this runs for every unchanged source on every index
+    // pass. Passing the parsed blocks eagerly would pay that cost even when the
+    // cheap SQL guard below proves there is nothing to do (issue #398 review).
+    blocksFor) {
+        // The file is unchanged, so its indexed chunks already carry the current
+        // blocks' hashes — the missing rows can be counted in SQL without parsing.
+        // A chunk row with no `entry_hash` predates that column, in which case the
+        // DB cannot answer and the blocks have to be parsed.
+        const stats = this.stmts.chunkHashStats.get(sourcePath);
+        const knowable = (stats?.total ?? 0) > 0 && (stats?.withHash ?? 0) > 0;
+        if (knowable) {
+            const missing = this.stmts.countMissingLifecycle.get(sourcePath);
+            if ((missing?.c ?? 0) === 0)
+                return;
+        }
+        const blocks = blocksFor();
+        if (blocks.length === 0)
+            return;
+        // One transaction, not one implicit commit per row.
+        this.db.exec('BEGIN');
+        try {
+            for (const b of blocks) {
+                this.stmts.upsertLifecycle.run(b.entryHash, sourcePath, firstSeen);
+            }
+            this.db.exec('COMMIT');
+        }
+        catch (err) {
+            try {
+                this.db.exec('ROLLBACK');
+            }
+            catch {
+                /* txn already unwound */
+            }
+            throw err;
+        }
+    }
     /**
      * Close the handle AND drop it from the singleton cache, so a later
      * `forPath(samePath)` opens a fresh handle instead of returning this closed one

package/dist/agent/knowledge/archive-db.js.map

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package/dist/agent/knowledge/config.d.ts

@@ -6,11 +6,13 @@
  * are sanitized (non-finite / out-of-range JSON ⇒ default) so the indexer never
  * chunks with a NaN window.
  */
-import type { KnowledgeArchiveConfig, ResolvedKnowledgeArchiveCfg, KnowledgeSharedConfig, ResolvedKnowledgeSharedCfg } from './types';
+import type { KnowledgeArchiveConfig, ResolvedKnowledgeArchiveCfg, KnowledgeSharedConfig, ResolvedKnowledgeSharedCfg, KnowledgeReflectionConfig, ResolvedKnowledgeReflectionCfg } from './types';
 export declare const ARCHIVE_DEFAULTS: ResolvedKnowledgeArchiveCfg;
 export declare function resolveArchiveConfig(agentCfg?: KnowledgeArchiveConfig, globalCfg?: KnowledgeArchiveConfig): ResolvedKnowledgeArchiveCfg;
 export declare const SHARED_DEFAULTS: ResolvedKnowledgeSharedCfg;
 export declare function resolveSharedConfig(agentCfg?: KnowledgeSharedConfig, globalCfg?: KnowledgeSharedConfig): ResolvedKnowledgeSharedCfg;
+export declare const REFLECTION_DEFAULTS: ResolvedKnowledgeReflectionCfg;
+export declare function resolveReflectionConfig(agentCfg?: KnowledgeReflectionConfig, globalCfg?: KnowledgeReflectionConfig): ResolvedKnowledgeReflectionCfg;
 /** Directory for a project's shared vault: <root>/<project>. */
 export declare function sharedVaultDir(cfg: ResolvedKnowledgeSharedCfg): string;
 /** The shared vault's SQLite index path. */

package/dist/agent/knowledge/config.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../../../src/agent/knowledge/config.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAIH,OAAO,KAAK,EACV,sBAAsB,EACtB,2BAA2B,EAC3B,qBAAqB,EACrB,0BAA0B,EAC3B,MAAM,SAAS,CAAC;AAEjB,eAAO,MAAM,gBAAgB,EAAE,2BAK9B,CAAC;AAiBF,wBAAgB,oBAAoB,CAClC,QAAQ,CAAC,EAAE,sBAAsB,EACjC,SAAS,CAAC,EAAE,sBAAsB,GACjC,2BAA2B,CAuB7B;AAID,eAAO,MAAM,eAAe,EAAE,0BAM7B,CAAC;AAoBF,wBAAgB,mBAAmB,CACjC,QAAQ,CAAC,EAAE,qBAAqB,EAChC,SAAS,CAAC,EAAE,qBAAqB,GAChC,0BAA0B,CAiB5B;AAED,gEAAgE;AAChE,wBAAgB,cAAc,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEtE;AAED,4CAA4C;AAC5C,wBAAgB,YAAY,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEpE;AAED,2FAA2F;AAC3F,wBAAgB,cAAc,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEtE"}
+{"version":3,"file":"config.d.ts","sourceRoot":"","sources":["../../../src/agent/knowledge/config.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAMH,OAAO,KAAK,EACV,sBAAsB,EACtB,2BAA2B,EAC3B,qBAAqB,EACrB,0BAA0B,EAC1B,yBAAyB,EACzB,8BAA8B,EAC/B,MAAM,SAAS,CAAC;AAEjB,eAAO,MAAM,gBAAgB,EAAE,2BAK9B,CAAC;AAiBF,wBAAgB,oBAAoB,CAClC,QAAQ,CAAC,EAAE,sBAAsB,EACjC,SAAS,CAAC,EAAE,sBAAsB,GACjC,2BAA2B,CAuB7B;AAID,eAAO,MAAM,eAAe,EAAE,0BAO7B,CAAC;AAoBF,wBAAgB,mBAAmB,CACjC,QAAQ,CAAC,EAAE,qBAAqB,EAChC,SAAS,CAAC,EAAE,qBAAqB,GAChC,0BAA0B,CAmB5B;AAID,eAAO,MAAM,mBAAmB,EAAE,8BAQjC,CAAC;AAEF,wBAAgB,uBAAuB,CACrC,QAAQ,CAAC,EAAE,yBAAyB,EACpC,SAAS,CAAC,EAAE,yBAAyB,GACpC,8BAA8B,CAiBhC;AAED,gEAAgE;AAChE,wBAAgB,cAAc,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEtE;AAED,4CAA4C;AAC5C,wBAAgB,YAAY,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEpE;AAED,2FAA2F;AAC3F,wBAAgB,cAAc,CAAC,GAAG,EAAE,0BAA0B,GAAG,MAAM,CAEtE"}

package/dist/agent/knowledge/config.js

@@ -41,14 +41,17 @@ var __importStar = (this && this.__importStar) || (function () {
     };
 })();
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.SHARED_DEFAULTS = exports.ARCHIVE_DEFAULTS = void 0;
+exports.REFLECTION_DEFAULTS = exports.SHARED_DEFAULTS = exports.ARCHIVE_DEFAULTS = void 0;
 exports.resolveArchiveConfig = resolveArchiveConfig;
 exports.resolveSharedConfig = resolveSharedConfig;
+exports.resolveReflectionConfig = resolveReflectionConfig;
 exports.sharedVaultDir = sharedVaultDir;
 exports.sharedDbPath = sharedDbPath;
 exports.sharedNotesDir = sharedNotesDir;
 const os = __importStar(require("os"));
 const path = __importStar(require("path"));
+const config_1 = require("../dreaming/config");
+const config_2 = require("../skill-learning/config");
 exports.ARCHIVE_DEFAULTS = {
     enabled: true,
     tokenizer: 'unicode61', // "trigram" evaluated for Thai/CJK before locking (planning-64 D5)
@@ -93,6 +96,7 @@ exports.SHARED_DEFAULTS = {
     root: path.join(os.homedir(), '.claude-gateway', 'shared', 'kb'),
     mode: 'auto', // promote durable memories to the shared vault; gated by the K4 applier (#330). Set 'propose' for dry-run.
     graph: false, // K5 graph/dashboards are opt-in
+    staleness: config_1.STALENESS_DEFAULTS, // issue #392 part D
 };
 /**
  * A project key safe to use as a single path segment (no traversal/separators).
@@ -126,6 +130,31 @@ function resolveSharedConfig(agentCfg, globalCfg) {
         root,
         mode: mode === 'auto' ? 'auto' : 'propose', // anything but 'auto' ⇒ propose
         graph: pick(agentCfg?.graph, globalCfg?.graph, d.graph) === true,
+        // issue #392 part D: reuses the exact dreaming-staleness resolve/shape.
+        staleness: (0, config_1.resolveStalenessConfig)(agentCfg?.staleness, globalCfg?.staleness),
+    };
+}
+// ── Weekly shared-KB reflection pass (issue #392 part C) ────────────────────
+exports.REFLECTION_DEFAULTS = {
+    enabled: true,
+    dayOfWeek: 0, // Sunday
+    hour: 4,
+    minute: 0,
+    timezone: 'UTC',
+    maxClustersPerRun: 5,
+    reviewModel: 'claude-haiku-4-5-20251001',
+};
+function resolveReflectionConfig(agentCfg, globalCfg) {
+    const d = exports.REFLECTION_DEFAULTS;
+    const rawTz = pick(agentCfg?.timezone, globalCfg?.timezone, d.timezone);
+    return {
+        enabled: pick(agentCfg?.enabled, globalCfg?.enabled, d.enabled),
+        dayOfWeek: numOr(pick(agentCfg?.dayOfWeek, globalCfg?.dayOfWeek, d.dayOfWeek), d.dayOfWeek, 0, 6),
+        hour: numOr(pick(agentCfg?.hour, globalCfg?.hour, d.hour), d.hour, 0, 23),
+        minute: numOr(pick(agentCfg?.minute, globalCfg?.minute, d.minute), d.minute, 0, 59),
+        timezone: (0, config_2.isValidTimezone)(rawTz) ? rawTz : d.timezone,
+        maxClustersPerRun: numOr(pick(agentCfg?.maxClustersPerRun, globalCfg?.maxClustersPerRun, d.maxClustersPerRun), d.maxClustersPerRun, 0, 1000),
+        reviewModel: pick(agentCfg?.reviewModel, globalCfg?.reviewModel, d.reviewModel),
     };
 }
 /** Directory for a project's shared vault: <root>/<project>. */

package/dist/agent/knowledge/config.js.map

@@ -1 +1 @@
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package/dist/agent/knowledge/index.d.ts

@@ -10,10 +10,17 @@ export { ArchiveDB } from './archive-db';
 export type { ChunkWithMeta } from './archive-db';
 export { indexAgentArchive, indexSharedArchive, archiveDbPath } from './indexer';
 export { spawnArchiveReindex } from './reindex-spawn';
-export { resolveArchiveConfig, ARCHIVE_DEFAULTS, resolveSharedConfig, SHARED_DEFAULTS, sharedVaultDir, sharedDbPath, sharedNotesDir, } from './config';
-export type { KnowledgeSharedConfig, ResolvedKnowledgeSharedCfg } from './types';
-export { writeSharedNote, sharedNoteFilename } from './shared-writer';
-export { makeSharedPromoter } from './shared-promote';
+export { resolveArchiveConfig, ARCHIVE_DEFAULTS, resolveSharedConfig, SHARED_DEFAULTS, sharedVaultDir, sharedDbPath, sharedNotesDir, resolveReflectionConfig, REFLECTION_DEFAULTS, } from './config';
+export type { KnowledgeSharedConfig, ResolvedKnowledgeSharedCfg, KnowledgeReflectionConfig, ResolvedKnowledgeReflectionCfg, } from './types';
+export { writeSharedNote, sharedNoteFilename, sharedNoteExists, readSharedNote, deleteSharedNoteFile, MAX_SHARED_NOTE_SIZE, } from './shared-writer';
+export { makeSharedPromoter, mergeIntoNote } from './shared-promote';
+export { findSimilarSharedNotes } from './shared-dedup';
+export type { SimilarSharedNote } from './shared-dedup';
+export { runSharedStalenessGc, retireSharedNote, STALE_NOTE_PREFIX } from './shared-staleness';
+export type { SharedStalenessResult } from './shared-staleness';
+export { SharedReflectionManager, connectedComponents, msUntilNextDailyTime, nextReflectionDelay, isConsolidationDay, } from './reflection';
+export type { ReflectionResult, SharedReflectionManagerDeps } from './reflection';
+export { wholeNoteEntryBlock } from './lifecycle';
 export { compileWiki, parseWikiPage, extractLinks, buildBacklinks, buildDashboards, readVaultPages, graphFromPages, buildGraphModel, } from './wiki';
 export type { WikiPage, WikiClaim, Dashboards, WikiCompileResult, GraphNode, GraphEdge, GraphModel, } from './wiki';
 export { demoGraphModel, demoGraphModelSized, DEMO_MAX_SIZE } from './graph-demo';

package/dist/agent/knowledge/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/agent/knowledge/index.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,cAAc,CAAC;AACzC,YAAY,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAClD,OAAO,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AACjF,OAAO,EAAE,mBAAmB,EAAE,MAAM,iBAAiB,CAAC;AACtD,OAAO,EACL,oBAAoB,EACpB,gBAAgB,EAChB,mBAAmB,EACnB,eAAe,EACf,cAAc,EACd,YAAY,EACZ,cAAc,EACd,uBAAuB,EACvB,mBAAmB,GACpB,MAAM,UAAU,CAAC;AAClB,YAAY,EACV,qBAAqB,EACrB,0BAA0B,EAC1B,yBAAyB,EACzB,8BAA8B,GAC/B,MAAM,SAAS,CAAC;AACjB,OAAO,EACL,eAAe,EACf,kBAAkB,EAClB,gBAAgB,EAChB,cAAc,EACd,oBAAoB,EACpB,oBAAoB,GACrB,MAAM,iBAAiB,CAAC;AACzB,OAAO,EAAE,kBAAkB,EAAE,aAAa,EAAE,MAAM,kBAAkB,CAAC;AACrE,OAAO,EAAE,sBAAsB,EAAE,MAAM,gBAAgB,CAAC;AACxD,YAAY,EAAE,iBAAiB,EAAE,MAAM,gBAAgB,CAAC;AACxD,OAAO,EAAE,oBAAoB,EAAE,gBAAgB,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAC/F,YAAY,EAAE,qBAAqB,EAAE,MAAM,oBAAoB,CAAC;AAChE,OAAO,EACL,uBAAuB,EACvB,mBAAmB,EACnB,oBAAoB,EACpB,mBAAmB,EACnB,kBAAkB,GACnB,MAAM,cAAc,CAAC;AACtB,YAAY,EAAE,gBAAgB,EAAE,2BAA2B,EAAE,MAAM,cAAc,CAAC;AAClF,OAAO,EAAE,mBAAmB,EAAE,MAAM,aAAa,CAAC;AAClD,OAAO,EACL,WAAW,EACX,aAAa,EACb,YAAY,EACZ,cAAc,EACd,eAAe,EACf,cAAc,EACd,cAAc,EACd,eAAe,GAChB,MAAM,QAAQ,CAAC;AAChB,YAAY,EACV,QAAQ,EACR,SAAS,EACT,UAAU,EACV,iBAAiB,EACjB,SAAS,EACT,SAAS,EACT,UAAU,GACX,MAAM,QAAQ,CAAC;AAChB,OAAO,EAAE,cAAc,EAAE,mBAAmB,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAClF,OAAO,EAAE,aAAa,EAAE,MAAM,SAAS,CAAC;AACxC,YAAY,EAAE,KAAK,EAAE,MAAM,SAAS,CAAC;AACrC,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC;AAC9C,YAAY,EACV,sBAAsB,EACtB,2BAA2B,EAC3B,WAAW,EACX,WAAW,EACX,gBAAgB,EAChB,eAAe,EACf,gBAAgB,EAChB,oBAAoB,EACpB,WAAW,GACZ,MAAM,SAAS,CAAC"}

package/dist/agent/knowledge/index.js

@@ -8,7 +8,7 @@
  * K2 (core shrink), K4 (dreaming applier), K3 (shared KB).
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.classifyOrigin = exports.chunkMarkdown = exports.DEMO_MAX_SIZE = exports.demoGraphModelSized = exports.demoGraphModel = exports.buildGraphModel = exports.graphFromPages = exports.readVaultPages = exports.buildDashboards = exports.buildBacklinks = exports.extractLinks = exports.parseWikiPage = exports.compileWiki = exports.makeSharedPromoter = exports.sharedNoteFilename = exports.writeSharedNote = exports.sharedNotesDir = exports.sharedDbPath = exports.sharedVaultDir = exports.SHARED_DEFAULTS = exports.resolveSharedConfig = exports.ARCHIVE_DEFAULTS = exports.resolveArchiveConfig = exports.spawnArchiveReindex = exports.archiveDbPath = exports.indexSharedArchive = exports.indexAgentArchive = exports.ArchiveDB = void 0;
+exports.classifyOrigin = exports.chunkMarkdown = exports.DEMO_MAX_SIZE = exports.demoGraphModelSized = exports.demoGraphModel = exports.buildGraphModel = exports.graphFromPages = exports.readVaultPages = exports.buildDashboards = exports.buildBacklinks = exports.extractLinks = exports.parseWikiPage = exports.compileWiki = exports.wholeNoteEntryBlock = exports.isConsolidationDay = exports.nextReflectionDelay = exports.msUntilNextDailyTime = exports.connectedComponents = exports.SharedReflectionManager = exports.STALE_NOTE_PREFIX = exports.retireSharedNote = exports.runSharedStalenessGc = exports.findSimilarSharedNotes = exports.mergeIntoNote = exports.makeSharedPromoter = exports.MAX_SHARED_NOTE_SIZE = exports.deleteSharedNoteFile = exports.readSharedNote = exports.sharedNoteExists = exports.sharedNoteFilename = exports.writeSharedNote = exports.REFLECTION_DEFAULTS = exports.resolveReflectionConfig = exports.sharedNotesDir = exports.sharedDbPath = exports.sharedVaultDir = exports.SHARED_DEFAULTS = exports.resolveSharedConfig = exports.ARCHIVE_DEFAULTS = exports.resolveArchiveConfig = exports.spawnArchiveReindex = exports.archiveDbPath = exports.indexSharedArchive = exports.indexAgentArchive = exports.ArchiveDB = void 0;
 var archive_db_1 = require("./archive-db");
 Object.defineProperty(exports, "ArchiveDB", { enumerable: true, get: function () { return archive_db_1.ArchiveDB; } });
 var indexer_1 = require("./indexer");
@@ -25,11 +25,32 @@ Object.defineProperty(exports, "SHARED_DEFAULTS", { enumerable: true, get: funct
 Object.defineProperty(exports, "sharedVaultDir", { enumerable: true, get: function () { return config_1.sharedVaultDir; } });
 Object.defineProperty(exports, "sharedDbPath", { enumerable: true, get: function () { return config_1.sharedDbPath; } });
 Object.defineProperty(exports, "sharedNotesDir", { enumerable: true, get: function () { return config_1.sharedNotesDir; } });
+Object.defineProperty(exports, "resolveReflectionConfig", { enumerable: true, get: function () { return config_1.resolveReflectionConfig; } });
+Object.defineProperty(exports, "REFLECTION_DEFAULTS", { enumerable: true, get: function () { return config_1.REFLECTION_DEFAULTS; } });
 var shared_writer_1 = require("./shared-writer");
 Object.defineProperty(exports, "writeSharedNote", { enumerable: true, get: function () { return shared_writer_1.writeSharedNote; } });
 Object.defineProperty(exports, "sharedNoteFilename", { enumerable: true, get: function () { return shared_writer_1.sharedNoteFilename; } });
+Object.defineProperty(exports, "sharedNoteExists", { enumerable: true, get: function () { return shared_writer_1.sharedNoteExists; } });
+Object.defineProperty(exports, "readSharedNote", { enumerable: true, get: function () { return shared_writer_1.readSharedNote; } });
+Object.defineProperty(exports, "deleteSharedNoteFile", { enumerable: true, get: function () { return shared_writer_1.deleteSharedNoteFile; } });
+Object.defineProperty(exports, "MAX_SHARED_NOTE_SIZE", { enumerable: true, get: function () { return shared_writer_1.MAX_SHARED_NOTE_SIZE; } });
 var shared_promote_1 = require("./shared-promote");
 Object.defineProperty(exports, "makeSharedPromoter", { enumerable: true, get: function () { return shared_promote_1.makeSharedPromoter; } });
+Object.defineProperty(exports, "mergeIntoNote", { enumerable: true, get: function () { return shared_promote_1.mergeIntoNote; } });
+var shared_dedup_1 = require("./shared-dedup");
+Object.defineProperty(exports, "findSimilarSharedNotes", { enumerable: true, get: function () { return shared_dedup_1.findSimilarSharedNotes; } });
+var shared_staleness_1 = require("./shared-staleness");
+Object.defineProperty(exports, "runSharedStalenessGc", { enumerable: true, get: function () { return shared_staleness_1.runSharedStalenessGc; } });
+Object.defineProperty(exports, "retireSharedNote", { enumerable: true, get: function () { return shared_staleness_1.retireSharedNote; } });
+Object.defineProperty(exports, "STALE_NOTE_PREFIX", { enumerable: true, get: function () { return shared_staleness_1.STALE_NOTE_PREFIX; } });
+var reflection_1 = require("./reflection");
+Object.defineProperty(exports, "SharedReflectionManager", { enumerable: true, get: function () { return reflection_1.SharedReflectionManager; } });
+Object.defineProperty(exports, "connectedComponents", { enumerable: true, get: function () { return reflection_1.connectedComponents; } });
+Object.defineProperty(exports, "msUntilNextDailyTime", { enumerable: true, get: function () { return reflection_1.msUntilNextDailyTime; } });
+Object.defineProperty(exports, "nextReflectionDelay", { enumerable: true, get: function () { return reflection_1.nextReflectionDelay; } });
+Object.defineProperty(exports, "isConsolidationDay", { enumerable: true, get: function () { return reflection_1.isConsolidationDay; } });
+var lifecycle_1 = require("./lifecycle");
+Object.defineProperty(exports, "wholeNoteEntryBlock", { enumerable: true, get: function () { return lifecycle_1.wholeNoteEntryBlock; } });
 var wiki_1 = require("./wiki");
 Object.defineProperty(exports, "compileWiki", { enumerable: true, get: function () { return wiki_1.compileWiki; } });
 Object.defineProperty(exports, "parseWikiPage", { enumerable: true, get: function () { return wiki_1.parseWikiPage; } });

package/dist/agent/knowledge/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/agent/knowledge/index.ts"],"names":[],"mappings":";AAAA;;;;;;;GAOG;;;AAEH,2CAAyC;AAAhC,uGAAA,SAAS,OAAA;AAElB,qCAAiF;AAAxE,4GAAA,iBAAiB,OAAA;AAAE,6GAAA,kBAAkB,OAAA;AAAE,wGAAA,aAAa,OAAA;AAC7D,iDAAsD;AAA7C,oHAAA,mBAAmB,OAAA;AAC5B,mCAUkB;AAThB,8GAAA,oBAAoB,OAAA;AACpB,0GAAA,gBAAgB,OAAA;AAChB,6GAAA,mBAAmB,OAAA;AACnB,yGAAA,eAAe,OAAA;AACf,wGAAA,cAAc,OAAA;AACd,sGAAA,YAAY,OAAA;AACZ,wGAAA,cAAc,OAAA;AACd,iHAAA,uBAAuB,OAAA;AACvB,6GAAA,mBAAmB,OAAA;AAQrB,iDAOyB;AANvB,gHAAA,eAAe,OAAA;AACf,mHAAA,kBAAkB,OAAA;AAClB,iHAAA,gBAAgB,OAAA;AAChB,+GAAA,cAAc,OAAA;AACd,qHAAA,oBAAoB,OAAA;AACpB,qHAAA,oBAAoB,OAAA;AAEtB,mDAAqE;AAA5D,oHAAA,kBAAkB,OAAA;AAAE,+GAAA,aAAa,OAAA;AAC1C,+CAAwD;AAA/C,sHAAA,sBAAsB,OAAA;AAE/B,uDAA+F;AAAtF,wHAAA,oBAAoB,OAAA;AAAE,oHAAA,gBAAgB,OAAA;AAAE,qHAAA,iBAAiB,OAAA;AAElE,2CAMsB;AALpB,qHAAA,uBAAuB,OAAA;AACvB,iHAAA,mBAAmB,OAAA;AACnB,kHAAA,oBAAoB,OAAA;AACpB,iHAAA,mBAAmB,OAAA;AACnB,gHAAA,kBAAkB,OAAA;AAGpB,yCAAkD;AAAzC,gHAAA,mBAAmB,OAAA;AAC5B,+BASgB;AARd,mGAAA,WAAW,OAAA;AACX,qGAAA,aAAa,OAAA;AACb,oGAAA,YAAY,OAAA;AACZ,sGAAA,cAAc,OAAA;AACd,uGAAA,eAAe,OAAA;AACf,sGAAA,cAAc,OAAA;AACd,sGAAA,cAAc,OAAA;AACd,uGAAA,eAAe,OAAA;AAWjB,2CAAkF;AAAzE,4GAAA,cAAc,OAAA;AAAE,iHAAA,mBAAmB,OAAA;AAAE,2GAAA,aAAa,OAAA;AAC3D,iCAAwC;AAA/B,sGAAA,aAAa,OAAA;AAEtB,2CAA8C;AAArC,4GAAA,cAAc,OAAA"}

package/dist/agent/knowledge/indexer.d.ts

@@ -23,12 +23,5 @@ export declare function archiveDbPath(workspaceDir: string): string;
  * @param globalCfg    global `gateway.knowledge.archive`
  */
 export declare function indexAgentArchive(workspaceDir: string, agentCfg?: KnowledgeArchiveConfig, globalCfg?: KnowledgeArchiveConfig): IndexResult;
-/**
- * Index the SHARED, cross-agent vault (planning-64 K3): every `*.md` under the
- * project's `notes/` dir is chunked into the shared `kb.sqlite`. Shared notes are
- * authored by the owner's own agents (same trust domain) → provenance `agent`.
- * No-op when shared KB is disabled. Runs OFF the gateway event loop, same as the
- * per-agent indexer.
- */
 export declare function indexSharedArchive(agentCfg?: KnowledgeSharedConfig, globalCfg?: KnowledgeSharedConfig): IndexResult;
 //# sourceMappingURL=indexer.d.ts.map

package/dist/agent/knowledge/indexer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"indexer.d.ts","sourceRoot":"","sources":["../../../src/agent/knowledge/indexer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAkBH,OAAO,KAAK,EACV,WAAW,EACX,sBAAsB,EAEtB,qBAAqB,EAEtB,MAAM,SAAS,CAAC;AAKjB,yEAAyE;AACzE,wBAAgB,aAAa,CAAC,YAAY,EAAE,MAAM,GAAG,MAAM,CAG1D;AAoDD;;;;;;;GAOG;AACH,wBAAgB,iBAAiB,CAC/B,YAAY,EAAE,MAAM,EACpB,QAAQ,CAAC,EAAE,sBAAsB,EACjC,SAAS,CAAC,EAAE,sBAAsB,GACjC,WAAW,CAqBb;AAmGD;;;;;;GAMG;AACH,wBAAgB,kBAAkB,CAChC,QAAQ,CAAC,EAAE,qBAAqB,EAChC,SAAS,CAAC,EAAE,qBAAqB,GAChC,WAAW,CAmCb"}
+{"version":3,"file":"indexer.d.ts","sourceRoot":"","sources":["../../../src/agent/knowledge/indexer.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAkBH,OAAO,KAAK,EACV,WAAW,EACX,sBAAsB,EAEtB,qBAAqB,EAEtB,MAAM,SAAS,CAAC;AAKjB,yEAAyE;AACzE,wBAAgB,aAAa,CAAC,YAAY,EAAE,MAAM,GAAG,MAAM,CAG1D;AAoDD;;;;;;;GAOG;AACH,wBAAgB,iBAAiB,CAC/B,YAAY,EAAE,MAAM,EACpB,QAAQ,CAAC,EAAE,sBAAsB,EACjC,SAAS,CAAC,EAAE,sBAAsB,GACjC,WAAW,CAqBb;AAoID,wBAAgB,kBAAkB,CAChC,QAAQ,CAAC,EAAE,qBAAqB,EAChC,SAAS,CAAC,EAAE,qBAAqB,GAChC,WAAW,CAmCb"}

package/dist/agent/knowledge/indexer.js

@@ -176,19 +176,27 @@ function reindexInto(db, opts) {
         result.filesSeen++;
         const hash = sha256(content);
         const existing = db.getSource(rel);
+        const mtime = Math.floor(stat.mtimeMs);
         if (existing && existing.hash === hash) {
             result.filesSkipped++; // hash-guarded: unchanged, no re-chunk
+            // ...but DO make sure its lifecycle rows exist (issue #398). Skipping
+            // straight past the block computation below left every note that predates
+            // the lifecycle feature — or was simply never edited since — invisible to
+            // the staleness GC forever. Seeded from mtime so real ages are preserved.
+            db.backfillLifecycle(rel, mtime, () => entryBlocksFor(opts.source, rel, content));
             continue;
         }
-        const mtime = Math.floor(stat.mtimeMs);
         const origin = opts.originFn(rel);
         const chunks = (0, chunk_1.chunkMarkdown)(content, opts.chunkTokens, opts.chunkOverlap);
-        // Entry-lifecycle identity (planning-66): only archive-tier files get an
-        // entry_hash (evergreen Lane-1, pinned files and the shared vault are exempt,
-        // so the GC can never consider them). Each FTS chunk inherits the entry_hash of
-        // the markdown block it starts in; blocks are the clean, movable unit the GC
-        // operates on (chunks are overlapping token windows and must never be moved).
-        const blocks = opts.source === 'memory' && (0, lifecycle_1.isArchiveTierPath)(rel) ? (0, lifecycle_1.parseEntryBlocks)(content) : [];
+        // Entry-lifecycle identity (planning-66 / issue #392). Personal archive-tier
+        // files get one entry per bullet/header block (evergreen Lane-1 and pinned
+        // files are exempt, so the GC can never consider them). Shared-vault notes
+        // (issue #392 part D) get ONE whole-file block each — a shared note's unit of
+        // identity is the whole file, matching every other shared-KB operation. Each
+        // FTS chunk inherits the entry_hash of the block it starts in; blocks are the
+        // clean, movable unit the GC operates on (chunks are overlapping token windows
+        // and must never be moved).
+        const blocks = entryBlocksFor(opts.source, rel, content);
         const rows = chunks.map((c) => ({
             chunk: {
                 id: `${rel}#${c.startLine}-${c.endLine}`,
@@ -232,6 +240,25 @@ function reindexInto(db, opts) {
  * No-op when shared KB is disabled. Runs OFF the gateway event loop, same as the
  * per-agent indexer.
  */
+/**
+ * Entry blocks a source contributes to `kb_entry_lifecycle`. Personal
+ * archive-tier files get one entry per bullet/header block (evergreen Lane-1 and
+ * pinned files are exempt, so the GC can never consider them); shared-vault
+ * notes get ONE whole-file block each, matching every other shared-KB operation.
+ * Each FTS chunk inherits the entry_hash of the block it starts in; blocks are
+ * the clean, movable unit the GC operates on (chunks are overlapping token
+ * windows and must never be moved).
+ *
+ * Shared by the re-chunk path and the hash-skip backfill path (issue #398) so
+ * the two can never disagree about what an entry is.
+ */
+function entryBlocksFor(source, rel, content) {
+    if (source === 'memory' && (0, lifecycle_1.isArchiveTierPath)(rel))
+        return (0, lifecycle_1.parseEntryBlocks)(content);
+    if (source === 'shared')
+        return (0, lifecycle_1.wholeNoteEntryBlock)(content);
+    return [];
+}
 function indexSharedArchive(agentCfg, globalCfg) {
     const empty = {
         filesSeen: 0,

package/dist/agent/knowledge/indexer.js.map

@@ -1 +1 @@
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package/dist/agent/knowledge/lifecycle.d.ts

@@ -23,12 +23,15 @@
 /** Pinned archive files are searchable but structurally exempt from GC. */
 export declare const PINNED_PREFIX = "memory/pinned/";
 /**
- * True when a workspace-relative path is a GC-eligible archive-tier entry source
- * (planning-66). The archive tier is `memory/**.md`, EXCEPT:
+ * True when a workspace-relative path is a GC-eligible PERSONAL archive-tier
+ * entry source (planning-66). The archive tier is `memory/**.md`, EXCEPT:
  *   - evergreen Lane-1 (`MEMORY.md`/`USER.md` at the root) — never touched,
  *   - pinned files (`memory/pinned/**`) — searchable but never aged out.
- * Only these files get an `entry_hash` + lifecycle row; everything else (evergreen,
- * pinned, the shared vault) has no lifecycle, so the GC can never consider it.
+ * Only these files get an `entry_hash` + lifecycle row; evergreen and pinned
+ * files have no lifecycle, so the GC can never consider them. The SHARED vault
+ * has its own, separate lifecycle (issue #392 part D, `wholeNoteEntryBlock` +
+ * `shared-staleness.ts`) — every shared note is eligible, gated by this
+ * function only for the PERSONAL `memory/**` tree.
  */
 export declare function isArchiveTierPath(rel: string): boolean;
 /** A parsed archive entry block with its 1-indexed inclusive line range. */
@@ -76,6 +79,19 @@ export interface Supersession {
     targetHash: string;
     bySpec: string;
 }
+/**
+ * Whole-file entry-block for the shared KB (issue #392, part D). Unlike the
+ * personal archive (one entry per bullet/header), a shared note's unit of
+ * identity is the WHOLE FILE — shared notes are freeform prose, not bulleted
+ * lists, and every other shared-KB operation (create/get/update/delete,
+ * near-dup search, wikilink graph) already treats one note = one fact/topic.
+ * Leading blank lines and a leading HTML comment (e.g. a `<!-- staled ... -->`
+ * marker written by the staleness GC when a note is moved) are skipped so the
+ * hashed text is stable across a move — mirrors `parseEntryBlocks` treating a
+ * leading comment as non-block prose. Returns `[]` for empty/comment-only
+ * content (nothing to give an identity to).
+ */
+export declare function wholeNoteEntryBlock(content: string): EntryBlock[];
 /**
  * Deterministically resolve which entries are superseded, over a set of blocks
  * (the whole archive tier). For every block B that declares "supersedes #N", any

package/dist/agent/knowledge/lifecycle.d.ts.map

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