youandme 0.2.0 → 0.2.1
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- data/VERSION +1 -1
- data/bin/youandme +1 -1
- data/youandme.gemspec +76 -0
- metadata +17 -16
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
0.2.
|
1
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+
0.2.1
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data/bin/youandme
CHANGED
@@ -55,7 +55,7 @@ unless(loader.check_file(left_file) and loader.check_file(right_file))
|
|
55
55
|
end
|
56
56
|
|
57
57
|
puts "Parsing data files... (may take a while)"
|
58
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-
max_rows =
|
58
|
+
max_rows = 0
|
59
59
|
left = loader.load_file(left_file, max_rows).sort{|a,b| a[:rsid] <=> b[:rsid]}
|
60
60
|
puts "\tLoaded #{left.length} SNPs from #{left_file}"
|
61
61
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# y left[0..4]
|
data/youandme.gemspec
ADDED
@@ -0,0 +1,76 @@
|
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1
|
+
# Generated by jeweler
|
2
|
+
# DO NOT EDIT THIS FILE DIRECTLY
|
3
|
+
# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
|
4
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+
# -*- encoding: utf-8 -*-
|
5
|
+
|
6
|
+
Gem::Specification.new do |s|
|
7
|
+
s.name = "youandme"
|
8
|
+
s.version = "0.2.1"
|
9
|
+
|
10
|
+
s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
|
11
|
+
s.authors = ["Preston Lee"]
|
12
|
+
s.date = "2011-11-04"
|
13
|
+
s.description = "An unofficial ruby library for quickly parsing 23andme raw data files into a plain Ruby structures for quick processing and analysis."
|
14
|
+
s.email = "conmotto@gmail.com"
|
15
|
+
s.executables = ["youandme"]
|
16
|
+
s.extra_rdoc_files = [
|
17
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+
"LICENSE.txt",
|
18
|
+
"README.md"
|
19
|
+
]
|
20
|
+
s.files = [
|
21
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+
".document",
|
22
|
+
"Gemfile",
|
23
|
+
"Gemfile.lock",
|
24
|
+
"LICENSE.txt",
|
25
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+
"README.md",
|
26
|
+
"Rakefile",
|
27
|
+
"VERSION",
|
28
|
+
"bin/youandme",
|
29
|
+
"lib/.DS_Store",
|
30
|
+
"lib/youandme.rb",
|
31
|
+
"lib/youandme/data_processor.rb",
|
32
|
+
"lib/youandme/raw_data_file_loader.rb",
|
33
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+
"lib/youandme/report.css",
|
34
|
+
"lib/youandme/report.md.erb",
|
35
|
+
"lib/youandme/xhtml-toc.xslt",
|
36
|
+
"test/helper.rb",
|
37
|
+
"test/test_youandme.rb",
|
38
|
+
"youandme.gemspec"
|
39
|
+
]
|
40
|
+
s.homepage = "http://github.com/preston/youandme"
|
41
|
+
s.licenses = ["Apache 2.0"]
|
42
|
+
s.require_paths = ["lib"]
|
43
|
+
s.rubygems_version = "1.8.11"
|
44
|
+
s.summary = "Data comparison and analysis tools for 23andme raw data files."
|
45
|
+
|
46
|
+
if s.respond_to? :specification_version then
|
47
|
+
s.specification_version = 3
|
48
|
+
|
49
|
+
if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
|
50
|
+
s.add_runtime_dependency(%q<getopt>, ["~> 1.4.1"])
|
51
|
+
s.add_runtime_dependency(%q<rpeg-multimarkdown>, ["~> 0.1.1"])
|
52
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+
s.add_runtime_dependency(%q<libxslt-ruby>, ["~> 1.0.8"])
|
53
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+
s.add_development_dependency(%q<shoulda>, [">= 0"])
|
54
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+
s.add_development_dependency(%q<bundler>, ["~> 1.0.0"])
|
55
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+
s.add_development_dependency(%q<jeweler>, ["~> 1.6.4"])
|
56
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+
s.add_development_dependency(%q<rcov>, [">= 0"])
|
57
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+
else
|
58
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+
s.add_dependency(%q<getopt>, ["~> 1.4.1"])
|
59
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+
s.add_dependency(%q<rpeg-multimarkdown>, ["~> 0.1.1"])
|
60
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+
s.add_dependency(%q<libxslt-ruby>, ["~> 1.0.8"])
|
61
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+
s.add_dependency(%q<shoulda>, [">= 0"])
|
62
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+
s.add_dependency(%q<bundler>, ["~> 1.0.0"])
|
63
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+
s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
|
64
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+
s.add_dependency(%q<rcov>, [">= 0"])
|
65
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+
end
|
66
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+
else
|
67
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+
s.add_dependency(%q<getopt>, ["~> 1.4.1"])
|
68
|
+
s.add_dependency(%q<rpeg-multimarkdown>, ["~> 0.1.1"])
|
69
|
+
s.add_dependency(%q<libxslt-ruby>, ["~> 1.0.8"])
|
70
|
+
s.add_dependency(%q<shoulda>, [">= 0"])
|
71
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+
s.add_dependency(%q<bundler>, ["~> 1.0.0"])
|
72
|
+
s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
|
73
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+
s.add_dependency(%q<rcov>, [">= 0"])
|
74
|
+
end
|
75
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+
end
|
76
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+
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
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name: youandme
|
3
3
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version: !ruby/object:Gem::Version
|
4
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-
version: 0.2.
|
4
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+
version: 0.2.1
|
5
5
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prerelease:
|
6
6
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platform: ruby
|
7
7
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authors:
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@@ -13,7 +13,7 @@ date: 2011-11-04 00:00:00.000000000 Z
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13
13
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dependencies:
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14
14
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- !ruby/object:Gem::Dependency
|
15
15
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name: getopt
|
16
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-
requirement: &
|
16
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+
requirement: &70332950701940 !ruby/object:Gem::Requirement
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17
17
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none: false
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18
18
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requirements:
|
19
19
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- - ~>
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@@ -21,10 +21,10 @@ dependencies:
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21
21
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version: 1.4.1
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22
22
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type: :runtime
|
23
23
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prerelease: false
|
24
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-
version_requirements: *
|
24
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+
version_requirements: *70332950701940
|
25
25
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- !ruby/object:Gem::Dependency
|
26
26
|
name: rpeg-multimarkdown
|
27
|
-
requirement: &
|
27
|
+
requirement: &70332950700840 !ruby/object:Gem::Requirement
|
28
28
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none: false
|
29
29
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requirements:
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30
30
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- - ~>
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@@ -32,10 +32,10 @@ dependencies:
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32
32
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version: 0.1.1
|
33
33
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type: :runtime
|
34
34
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prerelease: false
|
35
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-
version_requirements: *
|
35
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+
version_requirements: *70332950700840
|
36
36
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- !ruby/object:Gem::Dependency
|
37
37
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name: libxslt-ruby
|
38
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-
requirement: &
|
38
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+
requirement: &70332950699500 !ruby/object:Gem::Requirement
|
39
39
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none: false
|
40
40
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requirements:
|
41
41
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- - ~>
|
@@ -43,10 +43,10 @@ dependencies:
|
|
43
43
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version: 1.0.8
|
44
44
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type: :runtime
|
45
45
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prerelease: false
|
46
|
-
version_requirements: *
|
46
|
+
version_requirements: *70332950699500
|
47
47
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- !ruby/object:Gem::Dependency
|
48
48
|
name: shoulda
|
49
|
-
requirement: &
|
49
|
+
requirement: &70332950698760 !ruby/object:Gem::Requirement
|
50
50
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none: false
|
51
51
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requirements:
|
52
52
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- - ! '>='
|
@@ -54,10 +54,10 @@ dependencies:
|
|
54
54
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version: '0'
|
55
55
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type: :development
|
56
56
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prerelease: false
|
57
|
-
version_requirements: *
|
57
|
+
version_requirements: *70332950698760
|
58
58
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- !ruby/object:Gem::Dependency
|
59
59
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name: bundler
|
60
|
-
requirement: &
|
60
|
+
requirement: &70332950697640 !ruby/object:Gem::Requirement
|
61
61
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none: false
|
62
62
|
requirements:
|
63
63
|
- - ~>
|
@@ -65,10 +65,10 @@ dependencies:
|
|
65
65
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version: 1.0.0
|
66
66
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type: :development
|
67
67
|
prerelease: false
|
68
|
-
version_requirements: *
|
68
|
+
version_requirements: *70332950697640
|
69
69
|
- !ruby/object:Gem::Dependency
|
70
70
|
name: jeweler
|
71
|
-
requirement: &
|
71
|
+
requirement: &70332950696580 !ruby/object:Gem::Requirement
|
72
72
|
none: false
|
73
73
|
requirements:
|
74
74
|
- - ~>
|
@@ -76,10 +76,10 @@ dependencies:
|
|
76
76
|
version: 1.6.4
|
77
77
|
type: :development
|
78
78
|
prerelease: false
|
79
|
-
version_requirements: *
|
79
|
+
version_requirements: *70332950696580
|
80
80
|
- !ruby/object:Gem::Dependency
|
81
81
|
name: rcov
|
82
|
-
requirement: &
|
82
|
+
requirement: &70332950695540 !ruby/object:Gem::Requirement
|
83
83
|
none: false
|
84
84
|
requirements:
|
85
85
|
- - ! '>='
|
@@ -87,7 +87,7 @@ dependencies:
|
|
87
87
|
version: '0'
|
88
88
|
type: :development
|
89
89
|
prerelease: false
|
90
|
-
version_requirements: *
|
90
|
+
version_requirements: *70332950695540
|
91
91
|
description: An unofficial ruby library for quickly parsing 23andme raw data files
|
92
92
|
into a plain Ruby structures for quick processing and analysis.
|
93
93
|
email: conmotto@gmail.com
|
@@ -115,6 +115,7 @@ files:
|
|
115
115
|
- lib/youandme/xhtml-toc.xslt
|
116
116
|
- test/helper.rb
|
117
117
|
- test/test_youandme.rb
|
118
|
+
- youandme.gemspec
|
118
119
|
homepage: http://github.com/preston/youandme
|
119
120
|
licenses:
|
120
121
|
- Apache 2.0
|
@@ -130,7 +131,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
130
131
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version: '0'
|
131
132
|
segments:
|
132
133
|
- 0
|
133
|
-
hash: -
|
134
|
+
hash: -2773417468894919501
|
134
135
|
required_rubygems_version: !ruby/object:Gem::Requirement
|
135
136
|
none: false
|
136
137
|
requirements:
|