xgb 0.3.1 → 0.5.2
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- checksums.yaml +4 -4
- data/CHANGELOG.md +24 -0
- data/NOTICE.txt +2 -1
- data/README.md +11 -5
- data/lib/xgboost.rb +7 -2
- data/lib/xgboost/classifier.rb +1 -1
- data/lib/xgboost/dmatrix.rb +16 -5
- data/lib/xgboost/ffi.rb +9 -1
- data/lib/xgboost/regressor.rb +1 -1
- data/lib/xgboost/version.rb +1 -1
- data/vendor/libxgboost.arm64.dylib +0 -0
- data/vendor/libxgboost.dylib +0 -0
- data/vendor/libxgboost.so +0 -0
- data/vendor/xgboost.dll +0 -0
- metadata +9 -78
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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---
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SHA256:
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-
metadata.gz:
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data.tar.gz:
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metadata.gz: d2cea39eebbe29b40f1d4248bb9b4e3f4f112f2fcfcb2554bdf87c1fae0b5f3f
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data.tar.gz: 197dcfb49e37fc72a3f5ab5bb593f0faa7912fbc60219c1b49dd235b869e57eb
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SHA512:
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-
metadata.gz:
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-
data.tar.gz:
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+
metadata.gz: 6c58598a08cf976a2bf7b013ae3218f96ea6c96c0e345d2fe4d3e488ad8f409f905cf060e925b3307077cf844ae27babd9581bc3ff03c8c693cf812d08593808
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7
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+
data.tar.gz: 424a5542cb90830a017f976f706d85989f64d497dc2fd4351f95fb944ab8a48b51ad62f2b3fb7d4f1215428fdf49f913eb7b7c6beb82f0edebe35076c8f18ab3
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data/CHANGELOG.md
CHANGED
@@ -1,3 +1,27 @@
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1
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+
## 0.5.2 (2021-03-09)
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- Added ARM shared library for Mac
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5
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## 0.5.1 (2021-02-08)
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7
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- Fixed error with validation sets without early stopping
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8
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+
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9
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## 0.5.0 (2020-12-12)
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10
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11
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- Updated XGBoost to 1.3.0
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12
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+
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13
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## 0.4.1 (2020-08-26)
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14
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+
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15
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- Updated XGBoost to 1.2.0
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16
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+
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## 0.4.0 (2020-05-17)
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18
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+
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19
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- Updated XGBoost to 1.1.0
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20
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- Changed default `learning_rate` and `max_depth` for Scikit-Learn API to match Python
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- Added support for Rover
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- Improved performance of Numo datasets
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- Improved error message when OpenMP not found on Mac
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+
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1
25
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## 0.3.1 (2020-04-16)
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2
26
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3
27
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- Added `feature_names` and `feature_types` to `DMatrix`
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data/NOTICE.txt
CHANGED
data/README.md
CHANGED
@@ -2,7 +2,7 @@
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2
2
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3
3
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[XGBoost](https://github.com/dmlc/xgboost) - high performance gradient boosting - for Ruby
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4
4
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5
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-
[![Build Status](https://
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5
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+
[![Build Status](https://github.com/ankane/xgboost/workflows/build/badge.svg?branch=master)](https://github.com/ankane/xgboost/actions)
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6
6
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7
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## Installation
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8
8
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@@ -137,16 +137,22 @@ Data can be an array of arrays
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[[1, 2, 3], [4, 5, 6]]
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```
|
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139
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|
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-
Or a
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+
Or a Numo array
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141
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```ruby
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-
|
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+
Numo::NArray.cast([[1, 2, 3], [4, 5, 6]])
|
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+
```
|
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+
|
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+
Or a Rover data frame
|
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|
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+
```ruby
|
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+
Rover.read_csv("houses.csv")
|
144
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```
|
145
151
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|
146
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-
Or a
|
152
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+
Or a Daru data frame
|
147
153
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|
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```ruby
|
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-
|
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+
Daru::DataFrame.from_csv("houses.csv")
|
150
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```
|
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## Helpful Resources
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data/lib/xgboost.rb
CHANGED
@@ -19,7 +19,12 @@ module XGBoost
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19
19
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class << self
|
20
20
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attr_accessor :ffi_lib
|
21
21
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end
|
22
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-
lib_name =
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22
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+
lib_name =
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+
if RbConfig::CONFIG["host_os"] =~ /darwin/i && RbConfig::CONFIG["host_cpu"] =~ /arm/i
|
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+
FFI.map_library_name("xgboost.arm64")
|
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+
else
|
26
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+
FFI.map_library_name("xgboost")
|
27
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+
end
|
23
28
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vendor_lib = File.expand_path("../vendor/#{lib_name}", __dir__)
|
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self.ffi_lib = [vendor_lib]
|
25
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@@ -61,7 +66,7 @@ module XGBoost
|
|
61
66
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best_score = score
|
62
67
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best_iter = iteration
|
63
68
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best_message = message
|
64
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-
elsif iteration - best_iter >= early_stopping_rounds
|
69
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+
elsif early_stopping_rounds && iteration - best_iter >= early_stopping_rounds
|
65
70
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booster.best_iteration = best_iter
|
66
71
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puts "Stopping. Best iteration:\n#{best_message}" if verbose_eval
|
67
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break
|
data/lib/xgboost/classifier.rb
CHANGED
@@ -1,6 +1,6 @@
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1
1
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module XGBoost
|
2
2
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class Classifier < Model
|
3
|
-
def initialize(
|
3
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+
def initialize(n_estimators: 100, objective: "binary:logistic", importance_type: "gain", **options)
|
4
4
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super
|
5
5
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end
|
6
6
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data/lib/xgboost/dmatrix.rb
CHANGED
@@ -27,18 +27,25 @@ module XGBoost
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27
27
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raise Error, "Unknown feature type: #{v}"
|
28
28
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end
|
29
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end
|
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-
elsif
|
30
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+
elsif numo?(data)
|
31
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nrow, ncol = data.shape
|
32
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-
|
32
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+
elsif rover?(data)
|
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+
nrow, ncol = data.shape
|
34
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@feature_names = data.keys
|
35
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+
data = data.to_numo
|
33
36
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else
|
34
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nrow = data.count
|
35
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ncol = data.first.count
|
36
39
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flat_data = data.flatten
|
37
40
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end
|
38
41
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|
39
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-
handle_missing(flat_data, missing)
|
40
42
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c_data = ::FFI::MemoryPointer.new(:float, nrow * ncol)
|
41
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-
|
43
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+
if numo?(data)
|
44
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+
c_data.write_bytes(data.cast_to(Numo::SFloat).to_string)
|
45
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+
else
|
46
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+
handle_missing(flat_data, missing)
|
47
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+
c_data.write_array_of_float(flat_data)
|
48
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+
end
|
42
49
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check_result FFI.XGDMatrixCreateFromMat(c_data, nrow, ncol, missing, @handle)
|
43
50
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|
44
51
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ObjectSpace.define_finalizer(self, self.class.finalize(handle_pointer))
|
@@ -134,10 +141,14 @@ module XGBoost
|
|
134
141
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defined?(Daru::DataFrame) && data.is_a?(Daru::DataFrame)
|
135
142
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end
|
136
143
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|
137
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-
def
|
144
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+
def numo?(data)
|
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defined?(Numo::NArray) && data.is_a?(Numo::NArray)
|
139
146
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end
|
140
147
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|
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+
def rover?(data)
|
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+
defined?(Rover::DataFrame) && data.is_a?(Rover::DataFrame)
|
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+
end
|
151
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+
|
141
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def handle_missing(data, missing)
|
142
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data.map! { |v| v.nil? ? missing : v }
|
143
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end
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data/lib/xgboost/ffi.rb
CHANGED
@@ -2,7 +2,15 @@ module XGBoost
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2
2
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module FFI
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3
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extend ::FFI::Library
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|
5
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-
|
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begin
|
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ffi_lib XGBoost.ffi_lib
|
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rescue LoadError => e
|
8
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if ["/usr/local", "/opt/homebrew"].any? { |v| e.message.include?("Library not loaded: #{v}/opt/libomp/lib/libomp.dylib") } && e.message.include?("Reason: image not found")
|
9
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+
raise LoadError, "OpenMP not found. Run `brew install libomp`"
|
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else
|
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raise e
|
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end
|
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end
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7
15
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# https://github.com/dmlc/xgboost/blob/master/include/xgboost/c_api.h
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# keep same order
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data/lib/xgboost/regressor.rb
CHANGED
@@ -1,6 +1,6 @@
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1
1
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module XGBoost
|
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class Regressor < Model
|
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-
def initialize(
|
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+
def initialize(n_estimators: 100, objective: "reg:squarederror", importance_type: "gain", **options)
|
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super
|
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end
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data/lib/xgboost/version.rb
CHANGED
Binary file
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data/vendor/libxgboost.dylib
CHANGED
Binary file
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data/vendor/libxgboost.so
CHANGED
Binary file
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data/vendor/xgboost.dll
CHANGED
Binary file
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metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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name: xgb
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version: !ruby/object:Gem::Version
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-
version: 0.
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version: 0.5.2
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platform: ruby
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authors:
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- Andrew Kane
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autorequire:
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autorequire:
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bindir: bin
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cert_chain: []
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-
date:
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+
date: 2021-03-09 00:00:00.000000000 Z
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dependencies:
|
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- !ruby/object:Gem::Dependency
|
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name: ffi
|
@@ -24,78 +24,8 @@ dependencies:
|
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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-
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-
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requirement: !ruby/object:Gem::Requirement
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requirements:
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-
- - ">="
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- !ruby/object:Gem::Version
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version: '0'
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type: :development
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- - ">="
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-
- !ruby/object:Gem::Version
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version: '0'
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-
- !ruby/object:Gem::Dependency
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-
name: rake
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requirement: !ruby/object:Gem::Requirement
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requirements:
|
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-
- - ">="
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-
- !ruby/object:Gem::Version
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version: '0'
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-
type: :development
|
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-
prerelease: false
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-
version_requirements: !ruby/object:Gem::Requirement
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
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-
version: '0'
|
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-
- !ruby/object:Gem::Dependency
|
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-
name: minitest
|
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requirement: !ruby/object:Gem::Requirement
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requirements:
|
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-
- - ">="
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-
- !ruby/object:Gem::Version
|
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version: '5'
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type: :development
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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-
version: '5'
|
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-
- !ruby/object:Gem::Dependency
|
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-
name: daru
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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-
version: '0'
|
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type: :development
|
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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version: '0'
|
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-
- !ruby/object:Gem::Dependency
|
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-
name: numo-narray
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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version: '0'
|
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type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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-
version: '0'
|
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-
description:
|
98
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-
email: andrew@chartkick.com
|
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+
description:
|
28
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+
email: andrew@ankane.org
|
99
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executables: []
|
100
30
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extensions: []
|
101
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extra_rdoc_files: []
|
@@ -116,6 +46,7 @@ files:
|
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116
46
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- lib/xgboost/utils.rb
|
117
47
|
- lib/xgboost/version.rb
|
118
48
|
- vendor/LICENSE
|
49
|
+
- vendor/libxgboost.arm64.dylib
|
119
50
|
- vendor/libxgboost.dylib
|
120
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|
- vendor/libxgboost.so
|
121
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- vendor/xgboost.dll
|
@@ -123,7 +54,7 @@ homepage: https://github.com/ankane/xgboost
|
|
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54
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licenses:
|
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|
- Apache-2.0
|
125
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metadata: {}
|
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|
-
post_install_message:
|
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+
post_install_message:
|
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rdoc_options: []
|
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|
require_paths:
|
129
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|
- lib
|
@@ -138,8 +69,8 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
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- !ruby/object:Gem::Version
|
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version: '0'
|
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requirements: []
|
141
|
-
rubygems_version: 3.
|
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|
-
signing_key:
|
72
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+
rubygems_version: 3.2.3
|
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+
signing_key:
|
143
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|
specification_version: 4
|
144
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|
summary: High performance gradient boosting for Ruby
|
145
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|
test_files: []
|