workflow_manager 0.7.5 → 0.7.6
Sign up to get free protection for your applications and to get access to all the features.
- checksums.yaml +4 -4
- data/config/environments/redis.conf +1 -1
- data/lib/workflow_manager/server.rb +14 -0
- data/lib/workflow_manager/version.rb +1 -1
- data/start_workflow_manager.sh +1 -1
- data/test/job_list.rb +11 -4
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA256:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: e2da7b0c22f10f971c6dc3eb21c89b8321a8f52c2bda0bd42917c20a625ce995
|
4
|
+
data.tar.gz: 2ae4ffec963b02a83f37a3034af4af3835e9b27e018d05b7294979e716b3ec47
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 120bd8ae2bbae899b096d630b7cc050f828b0004c7cf9432cf7d4e16113d4c71d542c5ab8d32fbdb953199e5ae491aaadac0950759b371810b7c84170fc01f1f
|
7
|
+
data.tar.gz: 2c82352987cfcbfced6fe32bbe6a38544788b4d686277bd785a67a719ad22fef052102623388aec7bece99c059b7eb9c921bd07de695097cde7a87177f2ad26e
|
@@ -163,6 +163,7 @@ module WorkflowManager
|
|
163
163
|
RedisDB.new(1, @redis_conf)
|
164
164
|
end
|
165
165
|
@jobs = RedisDB.new(2, @redis_conf)
|
166
|
+
@trees = RedisDB.new(4, @redis_conf)
|
166
167
|
|
167
168
|
@system_log = File.join(@log_dir, "system.log")
|
168
169
|
@mutex = Mutex.new
|
@@ -555,6 +556,19 @@ module WorkflowManager
|
|
555
556
|
def cluster_node_list
|
556
557
|
@cluster.node_list
|
557
558
|
end
|
559
|
+
def save_dataset_tree(project_number, json)
|
560
|
+
@trees.transaction do |trees|
|
561
|
+
trees[project_number] = json
|
562
|
+
end
|
563
|
+
json
|
564
|
+
end
|
565
|
+
def load_dataset_tree(project_number)
|
566
|
+
json = nil
|
567
|
+
@trees.transaction do |trees|
|
568
|
+
json = trees[project_number]
|
569
|
+
end
|
570
|
+
json
|
571
|
+
end
|
558
572
|
end
|
559
573
|
end
|
560
574
|
|
data/start_workflow_manager.sh
CHANGED
data/test/job_list.rb
CHANGED
@@ -1,13 +1,13 @@
|
|
1
1
|
#!/usr/bin/env ruby
|
2
2
|
# encoding: utf-8
|
3
|
-
# Version = '
|
3
|
+
# Version = '20211001-104513'
|
4
4
|
|
5
5
|
PORT = (ARGV[0]||6380).to_i
|
6
6
|
require 'redis'
|
7
7
|
db0 = Redis.new(port: PORT, db: 0)
|
8
8
|
db1 = Redis.new(port: PORT, db: 1)
|
9
9
|
db2 = Redis.new(port: PORT, db: 2)
|
10
|
-
|
10
|
+
db4 = Redis.new(port: PORT, db: 4)
|
11
11
|
|
12
12
|
class Redis
|
13
13
|
def show_all
|
@@ -18,8 +18,8 @@ class Redis
|
|
18
18
|
end
|
19
19
|
end
|
20
20
|
|
21
|
-
dbs = [db0, db1, db2]
|
22
|
-
db_notes = ["state DB", "log DB", "project job DB"]
|
21
|
+
dbs = [db0, db1, db2, db4]
|
22
|
+
db_notes = ["state DB", "log DB", "project job DB", "JS tree DB"]
|
23
23
|
|
24
24
|
dbs.each.with_index do |db, i|
|
25
25
|
note = db_notes[i]
|
@@ -48,3 +48,10 @@ db2.keys.sort.each do |key|
|
|
48
48
|
value = db2.get(key)
|
49
49
|
puts [key, value].join("\t")
|
50
50
|
end
|
51
|
+
|
52
|
+
puts
|
53
|
+
puts "db3, status DB3, project specific"
|
54
|
+
db3.keys.sort.each do |key|
|
55
|
+
value = db3.get(key)
|
56
|
+
puts [key, value].join("\t")
|
57
|
+
end
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: workflow_manager
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.7.
|
4
|
+
version: 0.7.6
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Functional Genomics Center Zurich
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2021-
|
11
|
+
date: 2021-10-01 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|