workflow_manager 0.5.7 → 0.5.8

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA256:
3
- metadata.gz: ede215b5a867ebbafc9af7ead5a9afa04ed1530eac7d0d1bffb2ee42b09cbded
4
- data.tar.gz: 7f68d53462f3c22ec889edaec171a6d5685063090b28264dfd93a224ca2d6f95
3
+ metadata.gz: 2a2b2e23d038d7a8e71a88f3dfab605a10ce889a4bc59ec4fcd7ec647c7239c8
4
+ data.tar.gz: 44e6121985b273019fc5098efd6084736935149496ca6aa38e710f9f4ae5e48f
5
5
  SHA512:
6
- metadata.gz: dcc2bac302faf22e7170143d7377bb87144b3e6ccf049ba8d768318fd2f3a7ccdb213643c55fadbddfcdedd92b103e572dd75310d94c27fa917f55fd1c9d2c87
7
- data.tar.gz: 18789821274de2c8961f15e6a49194c1d4e2c2f09eab095e9f7e14f575388507ff83a0dff5da480bcb79ec276956eea85739ee4d3f8cfd12c6c44139cdc3b465
6
+ metadata.gz: 78ee76362caff7fe5f6eb668cae5858e05dd94b06e29dc8c754ce424c1c3af8c8d21d87ac4c4de8a40b17c7ad10dafd0492b6a465677d191f8e599d5db96e787
7
+ data.tar.gz: bd14b2c039458901783a4485c6aad6afbcf5f20a1fef89496e9e93db14d072425990b0b2629c2d05b0b1d8920d4917d46f2062c0f37a1d02e3861d891abc3742
@@ -556,7 +556,7 @@ module WorkflowManager
556
556
  err_file = File.join(@log_dir, new_job_script_base + "_e.log")
557
557
  #command = "g-sub -o #{log_file} -e #{err_file} -q user #{option} #{new_job_script}"
558
558
  sbatch_options = parse(option)
559
- command = "sbatch -o #{log_file} -e #{err_file} #{sbatch_options} #{new_job_script}"
559
+ command = "sbatch -o #{log_file} -e #{err_file} -N 1 #{sbatch_options} #{new_job_script}"
560
560
  puts command
561
561
  job_id = `#{command}`
562
562
  job_id = job_id.chomp.split.last
@@ -1,3 +1,3 @@
1
1
  module WorkflowManager
2
- VERSION = "0.5.7"
2
+ VERSION = "0.5.8"
3
3
  end
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: workflow_manager
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.5.7
4
+ version: 0.5.8
5
5
  platform: ruby
6
6
  authors:
7
7
  - Functional Genomics Center Zurich