workflow_manager 0.5.7 → 0.5.8

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: ede215b5a867ebbafc9af7ead5a9afa04ed1530eac7d0d1bffb2ee42b09cbded
-  data.tar.gz: 7f68d53462f3c22ec889edaec171a6d5685063090b28264dfd93a224ca2d6f95
+  metadata.gz: 2a2b2e23d038d7a8e71a88f3dfab605a10ce889a4bc59ec4fcd7ec647c7239c8
+  data.tar.gz: 44e6121985b273019fc5098efd6084736935149496ca6aa38e710f9f4ae5e48f
 SHA512:
-  metadata.gz: dcc2bac302faf22e7170143d7377bb87144b3e6ccf049ba8d768318fd2f3a7ccdb213643c55fadbddfcdedd92b103e572dd75310d94c27fa917f55fd1c9d2c87
-  data.tar.gz: 18789821274de2c8961f15e6a49194c1d4e2c2f09eab095e9f7e14f575388507ff83a0dff5da480bcb79ec276956eea85739ee4d3f8cfd12c6c44139cdc3b465
+  metadata.gz: 78ee76362caff7fe5f6eb668cae5858e05dd94b06e29dc8c754ce424c1c3af8c8d21d87ac4c4de8a40b17c7ad10dafd0492b6a465677d191f8e599d5db96e787
+  data.tar.gz: bd14b2c039458901783a4485c6aad6afbcf5f20a1fef89496e9e93db14d072425990b0b2629c2d05b0b1d8920d4917d46f2062c0f37a1d02e3861d891abc3742

data/lib/workflow_manager/cluster.rb

@@ -556,7 +556,7 @@ module WorkflowManager
         err_file = File.join(@log_dir, new_job_script_base + "_e.log")
         #command = "g-sub -o #{log_file} -e #{err_file} -q user #{option} #{new_job_script}"
         sbatch_options = parse(option)
-        command = "sbatch -o #{log_file} -e #{err_file} #{sbatch_options} #{new_job_script}"
+        command = "sbatch -o #{log_file} -e #{err_file} -N 1 #{sbatch_options} #{new_job_script}"
         puts command
         job_id = `#{command}`
         job_id = job_id.chomp.split.last

data/lib/workflow_manager/version.rb

@@ -1,3 +1,3 @@
 module WorkflowManager
-  VERSION = "0.5.7"
+  VERSION = "0.5.8"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: workflow_manager
 version: !ruby/object:Gem::Version
-  version: 0.5.7
+  version: 0.5.8
 platform: ruby
 authors:
 - Functional Genomics Center Zurich